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Copper speciation and its relationship with dissolved organic matter in a hypersaline coastal lagoon 高盐沿海泻湖中铜的形态及其与溶解有机质的关系
IF 2.5 3区 地球科学 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-12-01 Epub Date: 2025-11-19 DOI: 10.1016/j.marchem.2025.104581
Maria Sol Hernández-Conesa , Juan Santos-Echeandía , Patricia Bernárdez , Xosé Antón Álvarez-Salgado , Mar Nieto-Cid , Paula Sánchez-Marín
The Mar Menor (SE Iberian Peninsula) is the largest hypersaline coastal lagoon in Europe. This ecosystem is severely affected by anthropogenic impacts, causing the entry of metals and other contaminants. It is well known that total metal concentrations are not good predictors of their bioavailability, and its chemical speciation should be considered. Copper (Cu) is a metal of environmental concern whose speciation is largely controlled by natural organic ligands. The present work aims at studying the chemical speciation of dissolved Cu in the lagoon and its relationship with dissolved organic matter (DOM). For this purpose, 36 water samples were taken in different locations of the lagoon during six environmental surveys in 2021 and 2022. The chemical speciation of dissolved Cu was studied using cathodic stripping voltammetry (CLE-AdCSV), using salicylaldoxime as competing ligand. DOM was characterized by means of elemental composition (C and N), and optical properties (fluorescence and absorbance) in the same samples. Dissolved Cu speciation could be explained by a one ligand model, with ligand concentrations (LCu) ranging between 15.89 and 90.82 nM; and conditional stability constants (logK´Cu2+) varying between 11.36 and 12.92. LCu positively and significantly correlated with dissolved organic carbon (DOC) concentration, absorption at 254 nm, and humic-like fluorescence intensity, suggesting that humic materials were the main ligands controlling Cu speciation in this area. In addition, the significant positive correlation found between DOC-normalized LCu and the aromaticity index SUVA254 indicates that DOM aromaticity can be a good proxy of the metal binding ability of humic DOM. Despite the very high DOC concentrations present in Mar Menor, Cu complexation was similar to that found in other coastal areas with lower DOC, which may be explained by the hypersaline nature of the lagoon.
Mar Menor(伊比利亚半岛东南部)是欧洲最大的高盐沿海泻湖。这一生态系统受到人为影响的严重影响,导致金属和其他污染物进入。众所周知,总金属浓度不能很好地预测其生物利用度,应考虑其化学形态。铜(Cu)是一种环境关注的金属,其形态主要受天然有机配体的控制。本工作旨在研究泻湖中溶解铜的化学形态及其与溶解有机质(DOM)的关系。为此,在2021年和2022年的六次环境调查中,在泻湖的不同地点采集了36个水样。以水杨醛肟为竞争配体,采用阴极溶出伏安法(cl - adcsv)研究了溶解铜的化学形态。通过元素组成(C和N)和光学性质(荧光和吸光度)对同一样品中的DOM进行了表征。溶解铜的形态可以用单配体模型来解释,配体浓度(LCu)在15.89 ~ 90.82 nM之间;条件稳定常数(logK´Cu2+)在11.36和12.92之间变化。LCu与溶解有机碳(DOC)浓度、254 nm吸收、类腐殖质荧光强度呈正相关,表明腐殖质材料是控制该地区Cu形态形成的主要配体。此外,doc归一化后的LCu与芳香性指数SUVA254呈显著正相关,说明DOM芳香性可以很好地反映腐植质DOM的金属结合能力。尽管Mar Menor的DOC浓度非常高,但Cu络合与其他DOC较低的沿海地区相似,这可能是由于泻湖的高盐性质造成的。
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引用次数: 0
pHT measurements of TRIS buffer solutions in an artificial seawater matrix in the salinity range 5–40 and temperature range 5–40 °C. Part 1: Measurements and data fitting TRIS缓冲溶液在人工海水基质中盐度范围5-40,温度范围5-40℃的pHT测量。第1部分:测量和数据拟合
IF 2.5 3区 地球科学 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-12-01 Epub Date: 2025-08-26 DOI: 10.1016/j.marchem.2025.104551
Gaëlle Capitaine , Rieke Schäfer , Frank Bastkowski , Daniela Stoica , Olivier Pellegrino , Raquel Quendera , Eric P. Achterberg , Thibaut Wagener , Simon L. Clegg , Steffen Seitz , Paola Fisicaro
Spectrophotometric measurements of seawater total pH (pHT) contribute to the knowledge of the oceanic carbonate system, and hence to the assessment of the ocean carbon cycle and the monitoring of ocean acidification. Spectrophotometric measurements rely on the characterization of the indicator dye's second dissociation constant, obtained from measurements on solutions of known pHT. Therefore, Harned cell potentiometric measurements were performed on equimolal TRIS buffers (i.e. buffers containing equal molalities of 2-amino-2-(hydroxymethyl)-1,3-propanediol (TRIS, CAS reference number 77–86-1) and TRIS hydrochloride (TRIS.HCl)), made in an artificial seawater (ASW) matrix. Buffer solutions were prepared in an ASW matrix of nominal practical salinities from 5 to 40, and Harned cell measurements were performed on these solutions at temperatures from 5 °C to 40 °C. This provides, for the first time, pHT values of ASW/TRIS buffers that are consistent for the entire ranges of salinity relevant for oceanographic measurements, and for a wide range of temperature. The work presented includes a comparison of results from three National Metrology Institutes to assess reproducibility, and provides a function allowing the calculation of equimolal ASW/TRIS buffers pHT as a function of salinity, temperature and TRIS buffer molality. This function can be used to derive pHT values for zero TRIS molality, thus representing a pure ASW (i.e. a chemical environment unaffected by the presence of TRIS and TRIS.HCl), and referring to a true pHT scale. These values are needed for the characterization of the second dissociation constant of the dye with perspective of traceability to the International System of units.
海水总pH值(pHT)的分光光度测量有助于了解海洋碳酸盐系统,从而评估海洋碳循环和监测海洋酸化。分光光度法测量依赖于指示剂染料的第二解离常数的表征,从已知pHT溶液的测量中获得。因此,在等量TRIS缓冲液(即含有等量摩尔数的2-氨基-2-(羟甲基)-1,3-丙二醇(TRIS, CAS参考号77-86-1)和TRIS盐酸(TRIS)缓冲液(TRIS)上进行了Harned细胞电位测量。HCl)),在人工海水(ASW)基质中制成。缓冲溶液在标称实际盐度为5至40的ASW基质中制备,并在5°C至40°C的温度下对这些溶液进行Harned细胞测量。这首次提供了ASW/TRIS缓冲层的pHT值,该值与海洋测量相关的整个盐度范围和广泛的温度范围一致。介绍的工作包括对三个国家计量研究所的结果进行比较,以评估再现性,并提供了一个函数,允许计算等量ASW/TRIS缓冲液pHT作为盐度,温度和TRIS缓冲液摩尔浓度的函数。该函数可用于推导零TRIS质量浓度的pHT值,从而表示纯ASW(即不受TRIS和TRIS存在影响的化学环境)。HCl),并参考真正的pHT刻度。从国际单位制追溯的角度来看,染料的第二解离常数的表征需要这些值。
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引用次数: 0
Desorption dynamics of black carbon in a subtropical estuary 亚热带河口黑碳解吸动态
IF 2.5 3区 地球科学 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-12-01 Epub Date: 2025-11-05 DOI: 10.1016/j.marchem.2025.104576
Qinghua Zhang , Weifeng Yang , Ziming Fang , Zeheng Lin , Minfang Zheng , Mengya Chen
The geochemical behavior of black carbon (BC) in the estuary system controls the magnitude of riverine BC into coastal seas and thus the budget of BC in the ocean. However, the poor understanding of BC behavior in estuaries prevents us from well quantifying the riverine BC export. Here, eight cruises were conducted in the Jiulong River estuary to delineate the behavior of dissolved black carbon (DBC) determined using the benzenepolycarboxylic acid (BPCA) method, as well as its influence on riverine DBC estimation. DBC showed a range of 1.16–7.88 μmol L−1. On an estuarine scale, DBC correlated negatively with salinity in all cruises (p < 0.05), revealing a dominant dilution effect of seawater during the transport of riverine DBC to the Taiwan Strait. Notably, the continuous addition behavior of DBC was identified in the low salinity zones based on high-solution samplings, attributing to the desorption of soluble BC from particulate matter. Simulation analysis indicated that the desorption followed a pseudo-first-order kinetic law. The kinetic constants varied from 0.053 h−1 to 0.84 h−1 with the maximum in summer. Incorporating desorbed DBC, the annual export rate of riverine DBC was 1.1 Gg yr−1, about 26 % higher than 0.9 Gg yr−1 estimated based on the traditional algorithm (i.e., without addition). The first examination of DBC desorption kinetics provided insights into the behavior of BC in the estuary and the riverine DBC magnitude into the ocean.
河口系统中黑碳的地球化学行为控制着河流中黑碳进入近海的量,从而控制着海洋中黑碳的收支。然而,对河口BC行为的了解不足,使我们无法很好地量化河流BC出口。在九龙江入海口进行了8次巡航,研究了苯聚羧酸(BPCA)法测定溶解黑碳(DBC)的行为及其对河道DBC估算的影响。DBC为1.16 ~ 7.88 μmol L−1。在河口尺度上,所有航次的DBC与盐度呈负相关(p < 0.05),表明在河流DBC向台湾海峡的运输过程中,海水的稀释作用占主导地位。值得注意的是,基于高溶液采样,在低盐度区发现了DBC的连续添加行为,这归因于可溶BC从颗粒物中解吸。模拟分析表明,解吸过程遵循准一级动力学规律。动力学常数变化范围为0.053 ~ 0.84 h−1,夏季最大。考虑解吸DBC后,河流DBC的年出口量为1.1 Gg yr - 1,比传统算法(即不添加)估计的0.9 Gg yr - 1高出约26%。对DBC解吸动力学的第一次检查提供了对BC在河口和河流DBC量级进入海洋的行为的见解。
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引用次数: 0
Factors influencing the variability of stable isotopes of carbon, nitrogen, and sulfur in benthic macrofauna from Admiralty Bay, maritime Antarctic 影响南极海相金钟湾底栖大型动物碳、氮、硫稳定同位素变异的因素
IF 2.5 3区 地球科学 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-12-01 Epub Date: 2025-09-15 DOI: 10.1016/j.marchem.2025.104564
Agnieszka Jędruch , Marcelina Ziółkowska , Natalia Bulik , Piotr Paneth , Ewa Korejwo , Dominika Saniewska
This study examines benthic macrofauna from Admiralty Bay, maritime Antarctic, using triple stable isotope approach (δ13C, δ15N, and δ34S) to assess the impact of melting glaciers and human activity on trophic interactions in this unique ecosystem. Four species – the limpet Nacella concinna, the sea urchin Sterechinus neumayeri, the starfish Odontaster validus, and the brittle star Ophionotus victoriae – were analyzed to characterize their isotopic composition and trophic niches. The results indicate that diet and feeding strategies were the main drivers of δ13C, δ15N, and δ34S variability, demonstrating the utility of a multi-isotope approach for revealing diet composition, trophic plasticity, and benthic–pelagic coupling in polar benthic communities. Elevated δ13C values, typical of benthic primary producers, and depleted δ34S values, indicative of sulfur derived from sediments, confirmed a strong reliance of benthic macrofauna on benthic food sources. In contrast, decrease in δ13C together with higher and typically marine δ34S, can indicate higher contribution of pelagic diet sources. Spatial isotopic patterns further revealed areas influenced by glacial melt and shifting ice conditions, where consumers were relatively enriched in δ13C and δ15N compared to sites with rather open-ocean conditions. Notably, δ34S emerged as a possible early indicator of human-related disturbance, with depletion reflecting increased anthropogenic sulfur inputs and reduced oxygen conditions in benthic habitats linked to nutrient enrichment. Concurrent to 34S-depletion enrichment in 15N supports the role of nitrogen inputs from human activities. These findings demonstrate that stable isotopic tracers, particularly when incorporating sulfur alongside carbon and nitrogen, provide a powerful tool to detect and interpret ecological responses to both natural and anthropogenic drivers, offering insights into local ecosystem shifts and their broader implications for Antarctic food webs under climate change and growing human pressure.
本研究利用三稳定同位素方法(δ13C、δ15N和δ34S)分析了南极海洋金钟湾的底栖大型动物,评估了冰川融化和人类活动对这一独特生态系统营养相互作用的影响。本文分析了四种海洋生物(帽贝、海胆、海星、蛇尾海星)的同位素组成和营养生态位特征。结果表明,饮食和取食策略是极地底栖生物群落δ13C、δ15N和δ34S变化的主要驱动因素,证明了多同位素方法在揭示极地底栖生物群落的饮食组成、营养可塑性和底-上层耦合方面的效用。δ13C值升高是底栖生物初级生产者的典型特征,δ34S值下降表明沉积物中含有硫,这证实了底栖大型动物对底栖动物食物来源的强烈依赖。δ13C降低,δ34S较高,且典型为海洋δ34S,说明上层海洋饮食源的贡献较大。空间同位素模式进一步揭示了受冰川融化和移动冰条件影响的地区,与相对开放的海洋条件相比,这些地区的消费者δ13C和δ15N相对丰富。值得注意的是,δ34S可能是人类相关干扰的早期指标,其耗竭反映了与养分富集有关的底栖生物栖息地中人为硫输入增加和氧气条件降低。与34s耗竭同时发生的15N富集支持人类活动氮输入的作用。这些发现表明,稳定的同位素示踪剂,特别是将硫与碳和氮结合在一起的示踪剂,为检测和解释对自然和人为驱动因素的生态反应提供了强有力的工具,为了解当地生态系统的变化及其在气候变化和日益增长的人类压力下对南极食物网的更广泛影响提供了见解。
{"title":"Factors influencing the variability of stable isotopes of carbon, nitrogen, and sulfur in benthic macrofauna from Admiralty Bay, maritime Antarctic","authors":"Agnieszka Jędruch ,&nbsp;Marcelina Ziółkowska ,&nbsp;Natalia Bulik ,&nbsp;Piotr Paneth ,&nbsp;Ewa Korejwo ,&nbsp;Dominika Saniewska","doi":"10.1016/j.marchem.2025.104564","DOIUrl":"10.1016/j.marchem.2025.104564","url":null,"abstract":"<div><div>This study examines benthic macrofauna from Admiralty Bay, maritime Antarctic, using triple stable isotope approach (<em>δ</em><sup>13</sup>C, <em>δ</em><sup>15</sup>N, and <em>δ</em><sup>34</sup>S) to assess the impact of melting glaciers and human activity on trophic interactions in this unique ecosystem. Four species – the limpet <em>Nacella concinna</em>, the sea urchin <em>Sterechinus neumayeri</em>, the starfish <em>Odontaster validus</em>, and the brittle star <em>Ophionotus victoriae</em> – were analyzed to characterize their isotopic composition and trophic niches. The results indicate that diet and feeding strategies were the main drivers of <em>δ</em><sup>13</sup>C, <em>δ</em><sup>15</sup>N, and <em>δ</em><sup>34</sup>S variability, demonstrating the utility of a multi-isotope approach for revealing diet composition, trophic plasticity, and benthic–pelagic coupling in polar benthic communities. Elevated <em>δ</em><sup>13</sup>C values, typical of benthic primary producers, and depleted <em>δ</em><sup>34</sup>S values, indicative of sulfur derived from sediments, confirmed a strong reliance of benthic macrofauna on benthic food sources. In contrast, decrease in <em>δ</em><sup>13</sup>C together with higher and typically marine <em>δ</em><sup>34</sup>S, can indicate higher contribution of pelagic diet sources. Spatial isotopic patterns further revealed areas influenced by glacial melt and shifting ice conditions, where consumers were relatively enriched in <em>δ</em><sup>13</sup>C and <em>δ</em><sup>15</sup>N compared to sites with rather open-ocean conditions. Notably, <em>δ</em><sup>34</sup>S emerged as a possible early indicator of human-related disturbance, with depletion reflecting increased anthropogenic sulfur inputs and reduced oxygen conditions in benthic habitats linked to nutrient enrichment. Concurrent to <sup>34</sup>S-depletion enrichment in <sup>15</sup>N supports the role of nitrogen inputs from human activities. These findings demonstrate that stable isotopic tracers, particularly when incorporating sulfur alongside carbon and nitrogen, provide a powerful tool to detect and interpret ecological responses to both natural and anthropogenic drivers, offering insights into local ecosystem shifts and their broader implications for Antarctic food webs under climate change and growing human pressure.</div></div>","PeriodicalId":18219,"journal":{"name":"Marine Chemistry","volume":"273 ","pages":"Article 104564"},"PeriodicalIF":2.5,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145096873","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The impacts of chemical composition on bacterial processing of dissolved organic matter in the deep Arctic Ocean 北冰洋深处化学成分对细菌处理溶解有机物的影响
IF 2.5 3区 地球科学 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-12-01 Epub Date: 2025-11-14 DOI: 10.1016/j.marchem.2025.104579
N. Sylvestre, C. Guéguen
The cycling of dissolved organic matter (DOM) in the ocean plays a central role in carbon dynamics, influencing the ocean's ability to sequester carbon and regulate climate. However, the microbial processes that govern the transformation and persistence of DOM across different water masses remain poorly understood. In this study, we explore how a single bacterial community processes DOM from four distinct water masses (i.e, Pacific winter water, Atlantic halocline, Atlantic water - Barents Sea Strait branch, and deep temperature minimum) in the Canada Basin of the Arctic Ocean, using a combination of optical and molecular techniques to reveal the microbial mechanisms behind DOM reactivity and persistence. Although all water masses contained the same fluorescent components, each underwent unique processing by the microbial community after 20 days of laboratory-controlled incubation. This suggests that the composition of specific fluorescent components likely varies between different water layers, with an increase in these features by the end of the incubation. The number of common molecular features measured with a trapped ion mobility spectrometer coupled with a time-of-flight mass spectrometer (TIMS-TOF) and an electrospray ionization source (positive ionization mode) was higher in contiguous water masses, likely due to water mass mixing resulting in the formation of the Atlantic halocline. Spearman's rank correlations between fluorescence characteristics and TIMS-TOF features established connections between fluorescent characteristics and molecular formulas. Twenty-two distinct molecular features were related to the four humic-like. None of them were associated with tyrosine-like, revealing the distinct molecular-optical linkages between humic- and protein-like DOM. Overall, our findings indicate that the DOM reactivity depends on its optical and molecular composition. The mechanistic understanding of the factors that control the persistence of DOM in the ocean is essential for predicting the ocean's role in the global carbon cycle.
海洋中溶解有机物(DOM)的循环在碳动态中起着核心作用,影响海洋固碳和调节气候的能力。然而,控制DOM在不同水体中的转化和持久性的微生物过程仍然知之甚少。在这项研究中,我们探索了来自北冰洋加拿大盆地四种不同水体(即太平洋冬季水、大西洋盐跃层、大西洋水-巴伦支海海峡分支和深层最低温度)的单一细菌群落如何处理DOM,利用光学和分子技术相结合的方法揭示了DOM反应性和持久性背后的微生物机制。虽然所有的水团都含有相同的荧光成分,但经过20天的实验室控制孵育后,每个水团都经历了微生物群落的独特处理。这表明,特定荧光成分的组成可能在不同水层之间有所不同,在孵育结束时这些特征有所增加。用捕获离子迁移率谱仪、飞行时间质谱仪(TIMS-TOF)和电喷雾电离源(正电离模式)测量的共同分子特征的数量在连续的水团中更高,可能是由于水团混合导致了大西洋盐斜的形成。荧光特性与TIMS-TOF特性之间的Spearman秩相关建立了荧光特性与分子式之间的联系。22个不同的分子特征与4个腐殖质样有关。它们都没有与酪氨酸样相关,这揭示了腐殖质和蛋白质样DOM之间独特的分子光学联系。总的来说,我们的发现表明DOM的反应性取决于它的光学和分子组成。对控制DOM在海洋中持续存在的因素的机制理解对于预测海洋在全球碳循环中的作用至关重要。
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引用次数: 0
Advancing the characterization of organic Cu(II)-binding ligands in Arctic Ocean waters: Integration of IMAC, SPE, HRMS, and fluorescence techniques 推进北冰洋水体中有机Cu(II)结合配体的表征:IMAC、SPE、HRMS和荧光技术的整合
IF 2.5 3区 地球科学 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-12-01 Epub Date: 2025-11-10 DOI: 10.1016/j.marchem.2025.104578
Louis Criqui, Céline Guéguen
The availability and toxicity of dissolved copper (Cu) in the ocean are largely determined by its complexation with organic ligands, but the structure and origin of these ligands are still largely unknown. In this work, standard and marine Cu(II) complexing ligands were isolated using immobilized metal affinity chromatography (IMAC) and solid phase extraction (SPE), and characterized using high-resolution mass spectrometry (HRMS) and excitation-emission matrix (EEM) fluorescence to obtain information on the size distribution, molecular composition, and fluorescing properties of organic Cu(II)-binding molecules in the Arctic Ocean. We first investigated the retention performance of model ligands and found that N-containing ligands were preferentially isolated on the IMAC-SPE column. Application to Arctic Ocean dissolved organic matter (DOM) showed that the organic ligands accounted for up to 3 % of the DOM, consistent with previous studies. Robust correlations of HMRS peak intensities with EEM signals were used to expand chemical characterization of 511 molecular formulas in the IMAC-SPE and SPE extracts. The pairing based on the molecular classification associated with fluorescence signatures showed that 52 % Spearman correlations were linked to humic-like components. The necessity of multiple molecular annotation methods, like HRMS/fluorescence correlation or van Krevelen class attribution, was demonstrated to yield a better molecular identification. The combination of IMAC, SPE, HRMS, and EEM appears to be a promising approach for the characterization of organic Cu(II)-binding ligands in waters.
海洋中溶解铜(Cu)的可用性和毒性在很大程度上取决于其与有机配体的络合作用,但这些配体的结构和来源在很大程度上仍然未知。本研究采用固定化金属亲和色谱(IMAC)和固相萃取(SPE)分离标准和海洋Cu(II)络合配体,并采用高分辨率质谱(HRMS)和激发发射矩阵(EEM)荧光技术对其进行表征,以获得北冰洋有机Cu(II)结合分子的大小分布、分子组成和荧光特性等信息。我们首先研究了模型配体的保留性能,发现含n的配体在IMAC-SPE柱上被优先分离。对北冰洋溶解有机质(DOM)的应用表明,有机配体占DOM的比例高达3%,与前人的研究结果一致。利用HMRS峰强度与EEM信号的鲁强相关性,扩展了IMAC-SPE和SPE提取物中511个分子式的化学表征。基于与荧光特征相关的分子分类的配对表明,52%的斯皮尔曼相关性与腐殖质样成分有关。为了获得更好的分子鉴定,需要采用多种分子注释方法,如HRMS/荧光相关或van Krevelen类归属。IMAC、SPE、HRMS和EEM的结合似乎是表征水中有机Cu(II)结合配体的一种很有前途的方法。
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引用次数: 0
Ferrioxamine X1 mediated iron interaction with FoxA receptor in marine Pseudomonas stutzeri: An in silico approach 铁胺X1介导的铁与FoxA受体在海洋stutzeri假单胞菌中的相互作用:一种计算机方法
IF 2.5 3区 地球科学 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-12-01 Epub Date: 2025-09-13 DOI: 10.1016/j.marchem.2025.104563
Pratika Singh , Parli Venkateswaran Bhaskar , Alok Kumar Sinha , Vitthal T. Barvkar , Sarat Chandra Tripathy
The low iron concentrations in the Equatorial Indian Ocean (EIO) create a challenging environment for microbial life, requiring microorganisms to adapt. One strategy involves the production of siderophores, organic compounds that bind to Fe3+ ions and facilitate their uptake through specific receptors. Multiple siderophores may improve the bioavailability of iron due to the varied structures of siderophores and receptors. Since a single receptor may bind multiple siderophores, it is imperative to understand the molecular mechanisms underlying the interaction between siderophores and their receptors. This study used an in silico approach to explore these interactions. Pseudomonas stutzeri ATCC 17588, isolated from the EIO, was optimized for siderophore production under various growth conditions and analyzed using LC-qTOF-MS. The tertiary structure of the FoxA receptor and its interaction with the ferrioxamine X1-Fe3+ complex were examined through molecular docking. P. stutzeri ATCC 17588 produced multiple siderophores, including ferrioxamine X1, with optimal production at 10 nM iron concentration, pH 8.5, and 25 °C. The interaction energies between ferrioxamine X1-Fe3+ and the FoxA receptor were − 40.81 kcal/mol and − 9.3 kJ/mol, respectively, suggesting stable complexes. The predicted FoxA structure, validated through various analyses, revealed helices interspersed with strands. Hydrophobic interactions, involving residues such as Gln287, Arg792, and Glu180, were primarily responsible for the binding of ferrioxamine X1-Fe3+ to the FoxA receptor. This study sheds light on the role of ferrioxamine X1 in iron acquisition by P. stutzeri in the iron-limited EIO and enhances our understanding of microbial metal-ligand interactions in marine ecosystems.
赤道印度洋(EIO)的低铁浓度为微生物生命创造了一个具有挑战性的环境,需要微生物适应。一种策略涉及到铁载体的产生,这是一种与铁离子结合并促进其通过特定受体吸收的有机化合物。由于铁载体和受体的结构不同,多种铁载体可以提高铁的生物利用度。由于单一受体可以结合多个铁载体,因此了解铁载体与其受体之间相互作用的分子机制是必要的。本研究使用了一种计算机方法来探索这些相互作用。从EIO中分离得到假单胞菌stutzeri ATCC 17588,对其在不同生长条件下产铁载体进行了优化,并用LC-qTOF-MS对其进行了分析。通过分子对接研究了FoxA受体的三级结构及其与铁胺X1-Fe3+络合物的相互作用。P. stutzeri ATCC 17588产生多种铁载体,包括铁胺X1,铁浓度为10 nM, pH为8.5,温度为25°C。铁胺X1-Fe3+与FoxA受体的相互作用能分别为- 40.81 kcal/mol和- 9.3 kJ/mol,配合物稳定。预测的FoxA结构,通过各种分析验证,显示出螺旋穿插着链。涉及Gln287、Arg792和Glu180等残基的疏水相互作用是铁胺X1-Fe3+与FoxA受体结合的主要原因。该研究揭示了铁胺X1在P. stutzeri在铁受限的EIO中获取铁的作用,并增强了我们对海洋生态系统中微生物金属-配体相互作用的理解。
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引用次数: 0
Sedimentation and metal accumulation in the Gulf of Urabá – Colombian Caribbean: A 150-year record of natural processes and human impacts 乌拉巴湾-哥伦比亚加勒比海地区的沉积和金属积聚:150年的自然过程和人类影响记录
IF 2.5 3区 地球科学 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-09-01 Epub Date: 2025-07-25 DOI: 10.1016/j.marchem.2025.104548
Pedro Pablo Vallejo-Toro , Javier Alcántara-Carrió , Diana María Agudelo-Echavarría , Jaime Palacio-Baena
Natural and human factors control the sediment accumulation rates and metal deposition in estuaries. This study analyzes the changes in sedimentation rates and metal accumulation in the Gulf of Urabá (southern Colombian Caribbean) over the last 150 years. The sedimentation rates of three cores (C1, C2, and C3) were determined using the constant flux (CF) model based on the 210Pb isotope, averaging 0.14 cm/y, 0.22 cm/y and 0.10 cm/y, respectively. The temporal distribution of both major (Al, Fe, Ca, Mn) and minor (Zn, Cr, Cu, Ni) metals revealed important historical events, including the relocation of the main tributary mouth, intensive land use changes, and extreme climatic events. In agreement with previous studies in the area, moderate contamination and metal enrichment were found based on three geochemical indices (enrichment factor, anthropogenic factor and geo-accumulation index) considering global crust reference values. However, a lack of or minimal pollution was evident when considering the local background metal concentrations, which were determined in the bottom core sediments (2583 y BP). Therefore, this study evidences the relevance of using local background to determine metal pollution in surface sediments and cores. Despite high freshwater inputs and sediment supply, as well as anthropogenic activities in the gulf, sedimentation rates and metal accumulation are low compared to other marine environments worldwide, due to the presence of a salt wedge intrusion. The salt wedge creates a density difference, causing the clay fraction of the sediments, along with associated pollutants, to remain suspended for extended periods. As a result, sedimentation is hindered, and these materials are transported out of the gulf. Consequently, fine and medium silt dominate sedimentation and metal accumulation dynamics in the estuary.
自然和人为因素控制着河口泥沙堆积速率和金属沉积。本研究分析了过去150年来乌拉巴湾(哥伦比亚加勒比海南部)沉积速率和金属积累的变化。采用基于210Pb同位素的恒通量(CF)模型确定了C1、C2和C3 3个岩心的沉积速率,平均沉积速率分别为0.14 cm/y、0.22 cm/y和0.10 cm/y。主要金属(Al、Fe、Ca、Mn)和次要金属(Zn、Cr、Cu、Ni)的时间分布揭示了主要支流口迁移、土地集约利用变化和极端气候事件等重要历史事件。与前人研究结果一致,考虑全球地壳参考值,利用富集因子、人为因子和地成藏指数3个地球化学指标,发现该区存在中度污染和金属富集。然而,当考虑到在底部岩心沉积物(2583 y BP)中测定的当地背景金属浓度时,缺乏或最小的污染是明显的。因此,本研究证明了利用当地背景来确定地表沉积物和岩心中金属污染的相关性。尽管海湾有大量的淡水输入和沉积物供应,以及人为活动,但由于盐楔侵入的存在,与全球其他海洋环境相比,沉积速率和金属积累较低。盐楔产生了密度差,导致沉积物中的粘土部分以及相关污染物在较长时间内悬浮。结果,沉积受到阻碍,这些物质被运出海湾。因此,细粉砂和中粉砂在河口沉积和金属堆积动力学中占主导地位。
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引用次数: 0
Unsaturated aliphatic and sulfur-containing organic matter as surfactants in the surface microlayer 不饱和脂肪族和含硫有机物作为表面活性剂在表面微层
IF 3 3区 地球科学 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-09-01 Epub Date: 2025-07-20 DOI: 10.1016/j.marchem.2025.104547
N.R. Coffey , F.E. Agblemanyo , A.M. McKenna , A.S. Wozniak
The surface microlayer (SML) is a 10s–100s μm thick layer which mediates fluxes across the air-sea interface. Organic matter (OM) enrichments at the SML are known to influence SML physical properties and air-sea exchanges, but the role of detailed molecular level OM composition in influencing those processes hasn't been fully explored. SML and subsurface (SUB, 8–15 cm) water at four stations encompassing different influences (marine/fluvial/salt marsh) on the Delaware Bay system were sampled and examined for relationships between SML/SUB OM composition and surface tension. Samples collected December 2018–October 2019 show SML dissolved organic carbon (DOC) enrichments of 0.87 to 4.42 times the SUB concentration. Excitation-emission matrix spectroscopy (EEMs) and negative electrospray ionization (-ESI) Fourier-transform ion cyclotron resonance mass spectrometry (FT-ICR MS) show marine samples have higher contributions from photobleached material and higher relative abundances of CHON compounds relative to inner bay sites, respectively. Principal component analyses further reveal consistent differences in SML OM composition relative to SUB. The SML contains higher abundances of compounds with H/C > 1.7 and O/C < 0.2, including sulfur-containing compounds - compositions suggestive of surfactant-like molecules, able to depress surface tension at the air-sea interface. Surface tension depressions were significantly correlated with unsaturated aliphatic and sulfur-containing compounds identified from FT-ICR MS data, yet showed no relationship with DOC abundances or enrichments, highlighting the need for compositional assessments for understanding OM influences on SML properties and air-sea exchanges. The sources and structures of SML surfactant molecules should be a focus of future work.
表面微层(SML)是一层10 ~ 100 μm厚的介质层,通过海气界面调节通量。已知SML的有机质(OM)富集会影响SML的物理性质和海气交换,但详细的分子水平OM组成在影响这些过程中的作用尚未得到充分探讨。对特拉华湾系统不同影响(海洋/河流/盐沼)的四个站点的SML和地下(SUB, 8-15 cm)水进行了采样,并检查了SML/SUB OM组成与表面张力之间的关系。2018年12月至2019年10月采集的样品显示,SML溶解有机碳(DOC)浓度为SUB浓度的0.87至4.42倍。激发-发射矩阵光谱(EEMs)和负电喷雾电离(-ESI)傅里叶变换离子回旋共振质谱(FT-ICR MS)显示,海洋样品中光漂白物质的贡献更高,CHON化合物的相对丰度相对于内湾站点更高。主成分分析进一步揭示了SML OM组成相对于SUB的一致差异。SML含有较高的H/C和gt化合物丰度;1.7和O/C <;0.2,包括含硫化合物——表面活性剂类分子的组成,能够降低海气界面的表面张力。表面张力下降与FT-ICR MS数据中鉴定的不饱和脂肪族和含硫化合物显著相关,但与DOC丰度或富集度没有关系,这表明需要进行成分评估,以了解OM对SML性质和海气交换的影响。SML表面活性剂分子的来源和结构是今后研究的重点。
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引用次数: 0
Particulate iron seasonality between winter and spring in the open Southern Atlantic Ocean is primarily driven by non-biological processes 在开阔的南大西洋,颗粒铁在冬季和春季之间的季节性主要是由非生物过程驱动的
IF 2.5 3区 地球科学 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-09-01 Epub Date: 2025-08-15 DOI: 10.1016/j.marchem.2025.104552
Antoine Ringard , Hélène Planquette , Thato Mtshali , Alakendra Roychoudhury , Eva Bucciarelli
In the open Southern Ocean, primary productivity is mainly driven by limiting concentrations of iron. However, limited available iron data during winter leave a gap in our understanding of how seasonality affects the iron cycle, and primary productivity. In this context, two cruises followed the same transect in the Atlantic sector of the Southern Ocean, from the SubTropical zone to the Antarctic zone, during spring and winter. This study aims to determine whether particulate iron concentrations showed seasonal changes, and to identify the processes driving these variations. Particulate iron ranged between 0.04–0.99 nM and 0.04–1.17 nM during spring and winter, respectively, with the lowest concentrations measured in surface waters. Overall, seasonality did not consistently affect total pFe distributions, and when differences existed, total pFe concentrations were higher in winter than in spring. Our findings indicate that biogenic particulate iron is higher in spring than in winter, and represents only a minor component of total pFe in surface waters during both seasons. Therefore, biological processes do not account for the observed seasonal changes in total pFe concentrations. At certain stations, higher pFe concentrations in winter relative to spring appear to be related to episodic external inputs of lithogenic particles, such as iron-rich dust deposition and inputs from the ACC. The authigenic fraction is the primary contributor to total pFe. These particles seem to be formed through the precipitation of dissolved iron derived from the dissolution of lithogenic particles or hydrothermal activity.
在开阔的南大洋,初级生产力主要受铁浓度限制的驱动。然而,有限的冬季铁数据使我们对季节性如何影响铁循环和初级生产力的理解存在空白。在这种情况下,在春季和冬季,两次巡航沿着南大洋大西洋部分的同一样带,从亚热带区到南极区。本研究旨在确定颗粒铁浓度是否表现出季节性变化,并确定驱动这些变化的过程。春季和冬季颗粒铁浓度分别在0.04 ~ 0.99 nM和0.04 ~ 1.17 nM之间,地表水中颗粒铁浓度最低。总体而言,季节对总pFe分布的影响并不一致,当存在差异时,冬季总pFe浓度高于春季。我们的研究结果表明,生物颗粒铁在春季高于冬季,并且在两个季节只占地表水总pFe的一小部分。因此,生物过程不能解释观测到的全氟化铁浓度的季节变化。在某些站点,冬季的pFe浓度高于春季,似乎与产岩颗粒的偶发性外部输入有关,例如富铁粉尘沉积和来自ACC的输入。自生部分是总pFe的主要贡献者。这些颗粒似乎是由成岩颗粒溶解或热液活动产生的溶解铁的沉淀形成的。
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引用次数: 0
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Marine Chemistry
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