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Pluripotent Cinnamic Acid and Valproic Acid Hybrid Molecules Designed as Strong Anti-inflammatory and Anti-hyperlipidemic Compounds. 多能肉桂酸和丙戊酸杂化分子设计成强抗炎和抗高脂血症化合物。
IF 2.6 4区 医学 Q3 CHEMISTRY, MEDICINAL Pub Date : 2025-09-01 DOI: 10.2174/0115734064381790250722071316
Panagiotis Theodosis-Nobelos, Eleni A Rekka

Introduction: Inflammation and oxidative stress are considered main pathophysiological factors for neuronal and cardiovascular diseases, also leading to the impairment of main cellular metabolic pathways. Promotion of hyperlipidemia is also the result of inflammatory and oxidative (ROS production) processes. Additionally, compounds of medicinal interest like valproic and caffeic acids and amino acids like proline and tyrosine have shown antiinflammatory and cellular protective potency.

Methods: In the present study, amides of L-tyrosine, L-proline, and L-cysteine, and an ester of cinnamyl alcohol were synthesized by conjugation with caffeic acid, valproic acid, or (E)-3- (3,4-dimethoxyphenyl)acrylic acid (cinnamic acid derivative). This design aimed to explore the multiple activities of novel compounds, via the combination of structures related to the desired biological characteristics. The synthesized compounds were tested for their effects on oxidative stress in vitro and on acute inflammation and hyperlipidemia in vivo.

Results: The synthesized compounds decreased carrageenan-induced rat paw oedema up to 69% (the most active compound 6), and 49% for compound 2, an amide of valproic acid with L-tyrosine. Several compounds were effective antioxidants, with radical scavenging and lipid peroxidation inhibitory activity. Additionally, the synthesized molecules significantly decreased the plasma lipidemic markers in tyloxapol-induced hyperlipidemic rats. They decreased plasma triglycerides and total cholesterol up to 53% and 78% (compound 1), and LDL-cholesterol up to 69% (compound 5).

Discussion: The anti-inflammatory activity of the derivatives was equal to or much higher than that of ibuprofen and tolfenamic acid, two widely applied NSAIDs (nonsteroidal antiinflammatory drugs), whilst compound 2 was 3.3 times more active than valproic acid, with the latter being tested at four times higher dose. Concerning the antioxidant activity, several compounds were comparable to the strong antioxidant Trolox, and the effect on cholesterol levels for all the derivatives was comparable to or equal to simvastatin [a 3-hydroxy-3-methylglutaryl (HMG) coenzyme A reductase inhibitor].

Conclusion: The multiple activities of the synthesized compounds may serve for the manipulation of conditions involving inflammation and lipid deregulation, or the further optimization and production of compounds towards these ailments.

炎症和氧化应激被认为是神经元和心血管疾病的主要病理生理因素,也导致细胞主要代谢途径的损伤。促进高脂血症也是炎症和氧化(ROS)产生过程的结果。此外,具有药用价值的化合物,如丙戊酸和咖啡酸,以及氨基酸,如脯氨酸和酪氨酸,都显示出抗炎和细胞保护作用。方法:通过与咖啡酸、丙戊酸或(E)-3-(3,4-二甲氧基苯基)丙烯酸(肉桂酸衍生物)偶联,合成l -酪氨酸、l -脯氨酸和l -半胱氨酸酰胺和肉桂醇酯。该设计旨在通过与所需生物学特性相关的结构组合来探索新化合物的多种活性。在体外测试了合成的化合物对氧化应激和体内急性炎症和高脂血症的影响。结果:所合成的化合物对角叉菜胶诱导的大鼠足跖水肿的抑制作用达69%(最有效的化合物6),对丙戊酸与l -酪氨酸酰胺的化合物2的抑制作用达49%。一些化合物是有效的抗氧化剂,具有自由基清除和脂质过氧化抑制活性。此外,合成的分子显著降低了泰洛沙泊诱导的高脂血症大鼠的血浆血脂标志物。血浆甘油三酯和总胆固醇分别降低53%和78%(化合物1),低密度脂蛋白胆固醇降低69%(化合物5)。讨论:衍生物的抗炎活性等于或远高于布洛芬和托芬酸这两种广泛应用的非甾体抗炎药,而化合物2的活性是丙戊酸的3.3倍,后者的剂量是后者的4倍。在抗氧化活性方面,有几种化合物与强抗氧化剂Trolox相当,所有衍生物对胆固醇水平的影响与辛伐他汀(一种3-羟基-3-甲基戊二酰(HMG)辅酶a还原酶抑制剂)相当或相等。结论:所合成的化合物具有多种活性,可用于控制炎症和脂质失调的条件,或进一步优化和生产针对这些疾病的化合物。
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引用次数: 0
Advances in Medicinal Chemistry of Fused and Substituted Piperazines: Unlocking their Potential as Anticancer Agents. 融合和取代哌嗪的药物化学研究进展:释放其抗癌潜力。
IF 2.6 4区 医学 Q3 CHEMISTRY, MEDICINAL Pub Date : 2025-08-22 DOI: 10.2174/0115734064383459250806115629
Saumya Singh, Rajnish Kumar, Shrishti Tripathi, Salahuddin, Avijit Mazumder

Cancer is an abnormal growth of normal cells and has become a global healthcare concern. The availability of safer anticancer drugs with exceptional selectivity for healthy cells and high efficacy against various forms of cancer remains a significant challenge. Therefore, there is a need to develop target-specific and safer anticancer drugs. In medicinal chemistry, heterocyclic compounds play a crucial role by exhibiting diverse biological activities. Specifically, nitrogen-containing heterocyclic compounds are widely studied due to their diverse activities. The piperazine moiety serves as the building block for several molecules and is reported to have the ability to inhibit the cell cycle (G1/S phase), suppress angiogenesis, and interact with DNA. Piperazine also exhibits a flexible binding feature that enables it to interact with a range of biological targets, making it effective against various types of cancer. As there is a continuous need for an anticancer drug with improved efficacy and fewer side effects, piperazine derivatives are attracting the attention of researchers. This review highlights recent methods for the synthesis of fused and substituted piperazines, their structure-activity relationships, and their interactions with biological targets or receptors as anticancer agents. Thus, the presented review will be helpful to medicinal chemists in designing anticancer molecules that incorporate piperazines.

癌症是正常细胞的异常生长,已成为全球医疗保健关注的问题。获得对健康细胞具有特殊选择性和对各种形式的癌症具有高疗效的更安全的抗癌药物仍然是一个重大挑战。因此,有必要开发靶向性强、安全性高的抗癌药物。杂环化合物在药物化学中发挥着重要作用,具有多种生物活性。其中,含氮杂环化合物因其具有丰富的活性而受到广泛的研究。哌嗪部分作为几个分子的组成部分,据报道具有抑制细胞周期(G1/S期)、抑制血管生成和与DNA相互作用的能力。哌嗪还表现出一种灵活的结合特性,使其能够与一系列生物靶点相互作用,使其对各种类型的癌症有效。由于人们不断需要一种疗效更好、副作用更小的抗癌药物,哌嗪衍生物引起了研究人员的关注。本文综述了最近合成融合和取代哌嗪的方法,它们的结构-活性关系,以及它们与生物靶点或受体作为抗癌剂的相互作用。本文对药物化学家设计含哌嗪类的抗癌分子有一定的参考价值。
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引用次数: 0
Design, Synthesis, Biological Evaluation, and In Silico Studies of Tetrazole Derivatives as Potential Cytotoxic Agents. 四氮唑衍生物作为潜在细胞毒性药物的设计、合成、生物学评价和计算机研究。
IF 2.6 4区 医学 Q3 CHEMISTRY, MEDICINAL Pub Date : 2025-08-22 DOI: 10.2174/0115734064389466250805052834
Mahalakshmi C S Parepalli, Rajitha Galla

Introduction: Despite significant progress in cancer treatment, the need for new anticancer agents remains critical. Current research efforts are directed toward discovering novel compounds that exhibit potent cytotoxic activity while minimizing adverse effects. Thus, tetrazole derivatives have gained attention due to their potential biological activities, including anticancer effects.

Methods: A series of tetrazole derivatives (6a-l) were synthesized via α-keto halogenation of 2,4-difluoroacetophenone, followed by cyclization, nucleophilic substitution, and subsequent coupling with various aryl carboxylic acids. The synthesized compounds were characterized using spectroscopic techniques, including 13C NMR, 1H NMR, FT-IR, and HRMS. Their cytotoxic potential was assessed through an MTT assay across four human cancer cell lines. Other cytotoxic evaluations included apoptosis induction, cell cycle analysis, and EGFR-TK inhibition assays. Additionally, molecular docking studies were conducted to explore binding interactions, and in silico ADME predictions were performed to assess pharmacokinetic properties.

Results: The results obtained by the MTT assay indicated that compound 6d demonstrated significant cytotoxicity against A549 (lung cancer) cell lines, with an IC50 value of 2.74 μM, compared to doxorubicin (IC50 = 3.87 μM). Furthermore, cell cycle analysis and apoptosis suggested that 6d arrested the cell cycle in the S phase and triggered apoptosis in A549 cells. Docking studies and EGFR-TK inhibition assay proposed that 6l had good binding affinity towards EGFR enzyme and acts as a potential inhibitor (IC50 0.099 μM). The ADME analysis demonstrated favourable molecular properties, including acceptable lipophilicity, strong absorption, and high oral bioavailability.

Discussion: The synthesized tetrazole derivatives exhibited notable anticancer potential, with compound 6d inducing S-phase arrest and apoptosis in lung cancer cells, and 6l demonstrating strong EGFR inhibition. These biological effects were further supported by docking studies and favorable ADME profiles, providing mechanistic insight into their activity.

Conclusion: These findings indicate that the synthesized derivatives offer a promising approach for developing innovative and effective cancer therapies.

导读:尽管癌症治疗取得了重大进展,但对新的抗癌药物的需求仍然至关重要。目前的研究工作是针对发现新的化合物,表现出强大的细胞毒性活性,同时尽量减少不良反应。因此,四氮唑衍生物因其潜在的生物活性,包括抗癌作用而受到关注。方法:以2,4-二氟苯乙酮为原料,经α-酮卤化,环化,亲核取代,与各种芳基羧酸偶联,合成一系列四唑衍生物(6a-l)。利用13C NMR、1H NMR、FT-IR和HRMS等光谱技术对合成的化合物进行了表征。通过四种人类癌细胞系的MTT试验评估了它们的细胞毒性潜力。其他细胞毒性评价包括凋亡诱导、细胞周期分析和EGFR-TK抑制试验。此外,进行分子对接研究以探索结合相互作用,并进行计算机ADME预测以评估药代动力学特性。结果:MTT实验结果表明,化合物6d对A549(肺癌)细胞株具有明显的细胞毒性,IC50值为2.74 μM,而阿霉素的IC50值为3.87 μM。此外,细胞周期分析和细胞凋亡表明,6d使A549细胞周期阻滞在S期,并引发细胞凋亡。对接研究和EGFR- tk抑制实验表明,6l对EGFR酶具有良好的结合亲和力,可作为潜在的抑制剂(IC50为0.099 μM)。ADME分析显示了良好的分子特性,包括可接受的亲脂性,强吸收和高口服生物利用度。讨论:合成的四氮唑衍生物具有显著的抗癌潜力,化合物6d可诱导肺癌细胞s期阻滞和凋亡,化合物6l具有较强的EGFR抑制作用。对接研究和有利的ADME谱进一步支持了这些生物学效应,为其活性提供了机制见解。结论:这些发现表明,合成的衍生物为开发创新和有效的癌症治疗方法提供了一条有希望的途径。
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引用次数: 0
Blueberries and Their Polyphenols: A Review of the Evidence and the Potential Impact on Inflammation, Oxidative Stress, Vascular and Cardiometabolic Function. 蓝莓及其多酚:证据综述及其对炎症、氧化应激、血管和心脏代谢功能的潜在影响。
IF 2.6 4区 医学 Q3 CHEMISTRY, MEDICINAL Pub Date : 2025-07-24 DOI: 10.2174/0115734064300135250707043513
Shivangi Sharma

Blueberries contain a wide range of bioactive compounds, including polyphenols- plant-based chemicals known for their antioxidant and anti-inflammatory properties. Numerous in vitro and animal studies have suggested that these compounds may promote health. However, evidence regarding the effects of blueberries and their bioactive components in humans remains limited. This review focuses on 45 human studies investigating how blueberry consumption may influence markers of inflammation, oxidative stress, vascular function, cardiovascular health, and metabolic outcomes in both healthy and at-risk individuals. While some findings suggest potential benefits, especially for vascular function, more high-quality, well-controlled human trials are needed to confirm these effects. Furthermore, research exploring the relationship between the structure of specific polyphenols and their biological activity is essential for a deeper understanding of the mechanisms behind the reported health benefits.

蓝莓含有多种生物活性化合物,包括多酚——一种以抗氧化和抗炎特性而闻名的植物化学物质。许多体外和动物研究表明,这些化合物可能促进健康。然而,关于蓝莓及其生物活性成分对人类的影响的证据仍然有限。这篇综述的重点是45项人类研究,这些研究调查了食用蓝莓如何影响健康和高危人群的炎症、氧化应激、血管功能、心血管健康和代谢结果。虽然一些研究结果显示了潜在的益处,特别是对血管功能,但需要更多高质量、控制良好的人体试验来证实这些效果。此外,探索特定多酚结构与其生物活性之间的关系的研究对于更深入地了解所报道的健康益处背后的机制至关重要。
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引用次数: 0
Unlocking the Multifunctional Therapeutic Potential of Herbacetin: A Flavone derived Scaffold. 解锁herbacettin的多功能治疗潜力:一种黄酮衍生支架。
IF 2.6 4区 医学 Q3 CHEMISTRY, MEDICINAL Pub Date : 2025-07-24 DOI: 10.2174/0115734064389091250719051643
Navin Kumar Tailor

Herbacetin (HBT), a naturally occurring flavone, exhibits broad therapeutic -- potential, including anti-cancer, anti-inflammatory, antioxidant, antimicrobial, neuroprotective, and anti-diabetic effects, by modulating key signaling pathways such as NF-κB, PI3K/AKT, AP-1, SGK1/FoxO1, AMPK, SIRT1, MMP9, and NLRP3. It also inhibits several critical enzymes, including ornithine decarboxylase, ATP-citrate lyase, SGK1, AChE, α-glucosidase, and CYP3A4. In the context of cancer, HBT has shown particularly promising activity against breast cancer, liver carcinoma, human colon cancer, and epidermal carcinoma. Structurally, HBT shares significant similarity with well-known flavonoids such as quercetin and kaempferol, and the availability of established total synthetic methodologies makes it an attractive candidate for synthetic chemists. However, the structural modification and comprehensive evaluation of ' 'HBT's biological activity remain underexplored. This review highlights its isolation, total synthesis, pharmacological properties, molecular targets, and future directions, emphasizing the versatility of the HBT scaffold as a promising foundation for the development of novel therapeutic agents.

Herbacetin (HBT)是一种天然存在的黄酮,通过调节NF-κB、PI3K/AKT、AP-1、SGK1/FoxO1、AMPK、SIRT1、MMP9和NLRP3等关键信号通路,具有广泛的治疗潜力,包括抗癌、抗炎、抗氧化、抗菌、神经保护和抗糖尿病作用。它还抑制几种关键酶,包括鸟氨酸脱羧酶、atp -柠檬酸水解酶、SGK1、AChE、α-葡萄糖苷酶和CYP3A4。在癌症方面,HBT已显示出对乳腺癌、肝癌、人类结肠癌和表皮癌特别有希望的活性。在结构上,HBT与众所周知的类黄酮(如槲皮素和山奈酚)具有显著的相似性,并且已建立的全合成方法的可用性使其成为合成化学家的一个有吸引力的候选者。然而,HBT的结构修饰和生物活性的综合评价还有待进一步研究。本文综述了HBT支架的分离、全合成、药理性质、分子靶点和未来发展方向,强调了HBT支架的多功能性,为开发新型治疗药物奠定了良好的基础。
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引用次数: 0
Chitosan-Based Materials: A Comprehensive Review on Anticancer Drug Development. 壳聚糖基材料:抗癌药物研究综述
IF 1.9 4区 医学 Q3 CHEMISTRY, MEDICINAL Pub Date : 2025-07-22 DOI: 10.2174/0115734064388263250710083810
Faris J Tayeb, Mohammed Fareed Felemban, Amal Adnan Ashour, Alaa Shafie

Cancer remains one of the most formidable global health threats, responsible for millions of deaths annually due to the uncontrolled proliferation and spread of abnormal cells. The development of effective anticancer therapies is crucial, as anticancer drugs target key cellular mechanisms, including DNA replication, apoptosis, and essential signaling pathways. In this context, chitosan (CT) has emerged as a promising biomaterial for advancing cancer treatment. With its unique combination of biocompatibility, biodegradability, and versatility, CT is gaining significant attention as a platform for developing innovative drug delivery systems. Recent research has highlighted the potential of CT-based materials to enhance drug efficacy by enabling controlled release, improving bioavailability, and facilitating targeted tumor delivery. Further modifications to CT, such as carboxymethylation, sulfation, and graft copolymerization, have significantly expanded its application in cancer therapy, allowing for more efficient encapsulation of chemotherapeutic agents, reducing systemic toxicity, and combating multidrug resistance. This review focuses on the latest developments (2021-2024) in CT-based materials for anticancer drug delivery, exploring their design principles, therapeutic mechanisms, and clinical applications. Additionally, the review discusses the challenges faced in translating these promising systems to clinical practice and highlights future strategies for optimizing CT-based therapies to revolutionize cancer treatment.

癌症仍然是全球最可怕的健康威胁之一,由于异常细胞不受控制的增殖和扩散,每年造成数百万人死亡。开发有效的抗癌疗法至关重要,因为抗癌药物针对关键的细胞机制,包括DNA复制、细胞凋亡和必要的信号通路。在此背景下,壳聚糖(CT)已成为一种有前途的生物材料,以推进癌症治疗。由于其独特的生物相容性、生物可降解性和多功能性,CT作为开发创新给药系统的平台受到了极大的关注。最近的研究强调了基于ct的材料通过控制释放、提高生物利用度和促进靶向肿瘤递送来增强药物疗效的潜力。CT的进一步改进,如羧甲基化、磺化和接枝共聚,极大地扩展了其在癌症治疗中的应用,允许更有效地包封化疗药物,降低全身毒性,并对抗多药耐药。本文综述了ct基抗癌药物传递材料的最新进展(2021-2024),探讨了其设计原理、治疗机制和临床应用。此外,该综述还讨论了将这些有前景的系统转化为临床实践所面临的挑战,并强调了优化基于ct的治疗以彻底改变癌症治疗的未来策略。
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引用次数: 0
Recent Advances in Molecular Docking Techniques: Transforming Perspectives in Distinct Drug Targeting and Drug Discovery Approaches. 分子对接技术的最新进展:不同药物靶向和药物发现方法的转变视角。
IF 1.9 4区 医学 Q3 CHEMISTRY, MEDICINAL Pub Date : 2025-07-21 DOI: 10.2174/0115734064384472250716144736
Rashid M Ansari, Radhika N Mundke, Yogeeta O Agrawal, Sameer N Goyal, Kartik T Nakhate, Sumit S Rathod

Introduction: Drug targeting and drug discovery methodologies are advancing rapidly due to recent developments in molecular docking techniques. Molecular docking forecasts the interactions between a small molecule, such as a potential medicine, and a target protein or receptor.

Objectives: This comprehensive review focuses on significant advances in molecular docking algorithms such as Vina, Glide, and AutoDock, including their enhanced accuracy and efficiency in predicting drug-target interactions. It also examines how novel features, such as fragment-based docking, covalent docking, and virtual screening, have expanded the significance of docking in modern pharmaceutical research.

Methods: The literature search was carried out by employing search engines such as PubMed and Google Scholar with keywords such as Molecular Docking, Lead-Optimization, Protein Flexibility, Fragment-Based Docking, Covalent Docking, and Virtual Screening.

Results: This present state-of-the-art review highlights recent advances in various docking methodologies and their significant applications in drug discovery, while also discussing the scoring functions of some well-established studies. Furthermore, by predicting the interactions between putative medications and protein residues involved in the creation of covalent bonds, covalent docking provides new opportunities for targeting difficult drug-resistant mutations. The efficiency and precision of these simulations have been increased by improved sampling techniques and sophisticated algorithms, enabling the investigation of conformational changes and protein flexibility throughout the drug-binding process.

Conclusion: These approaches may hasten the course of emerging new remedies, increase the precision of hit-finding, and make it easier to find cutting-edge treatments for a variety of diseases. Molecular docking alone is insufficient to ensure the safety and efficacy of a pharmacological agent for commercialization. While it predicts binding affinity and interaction, it does not account for pharmacokinetics, toxicity, off-target effects, or in vivo behavior. Therefore, experimental validation through MD simulation, ADMET, in vitro, in vivo, and clinical studies is essential.

由于分子对接技术的发展,药物靶向和药物发现方法正在迅速发展。分子对接预测小分子(如潜在药物)与目标蛋白或受体之间的相互作用。目的:本文综述了分子对接算法的重大进展,如Vina、Glide和AutoDock,包括它们在预测药物-靶标相互作用方面提高的准确性和效率。它还探讨了诸如基于片段的对接、共价对接和虚拟筛选等新特性如何扩大了对接在现代药物研究中的意义。方法:利用PubMed、谷歌Scholar等搜索引擎进行文献检索,关键词为分子对接、Lead-Optimization、Protein Flexibility、Fragment-Based对接、Covalent对接、Virtual Screening。结果:这篇最新的综述强调了各种对接方法的最新进展及其在药物发现中的重要应用,同时也讨论了一些成熟研究的评分功能。此外,通过预测推定药物与参与共价键形成的蛋白质残基之间的相互作用,共价对接为靶向困难的耐药突变提供了新的机会。通过改进的采样技术和复杂的算法,这些模拟的效率和精度得到了提高,从而能够研究整个药物结合过程中的构象变化和蛋白质灵活性。结论:这些方法可能会加速新疗法的出现,提高发现靶点的精度,并使寻找各种疾病的尖端治疗方法变得更容易。单靠分子对接不足以保证药物商业化的安全性和有效性。虽然它预测结合亲和力和相互作用,但它不能解释药代动力学、毒性、脱靶效应或体内行为。因此,通过MD模拟、ADMET、体外、体内和临床研究进行实验验证是必不可少的。
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引用次数: 0
A Search for New Amidrazone Derivatives Containing 4-Oxybut-2-enoic Acid Moiety as Antibacterial Agents. 含4-氧丁-2-烯酸的新型氨基腙类抗菌药物的研究。
IF 1.9 4区 医学 Q3 CHEMISTRY, MEDICINAL Pub Date : 2025-07-15 DOI: 10.2174/0115734064396576250706091217
Renata Paprocka, Monika Przybysz, Kamila Pośpieszyńska, Ashley Chepkoech, Dominika Jagleniec, Antoni Godlewski, Karolina Korczak, Małgorzata Wiese-Szadkowska, Jolanta Kutkowska

Introduction: Bacterial diseases pose a significant challenge to modern medicine due to the rapid development of resistance by bacterial strains and the global migration of people, which facilitates the transmission of these diseases. Therefore, there is a need to develop new strategies to combat microorganisms and newer substances that could be used as antibiotics.

Methods: Six new derivatives, 2a-2f, containing a 4-oxybut-2-enoic acid moiety, were obtained by reacting amidrazones with maleic anhydride. The antimicrobial potency of compounds 2a-2f was studied using the microdilution method against the following bacterial strains: Escherichia coli, Yersinia enterocolitica, Pseudomonas aeruginosa, Staphylococcus aureus, Micrococcus luteus, Enterococcus faecalis, Gordonia rubripertincta, Mycobacterium smegmatis, and the fungal strain Candida albicans. Their antiproliferative activity was tested in cultures of human peripheral blood mononuclear cells stimulated with phytohemagglutinin. The bioavailability parameters of new compounds were predicted using Molinspiration software.

Results: Derivatives 2a-2c showed the strongest antibacterial activity, especially against Yersinia enterocolitica and Micrococcus luteus. Compounds 2d-2f inhibited the growth of Gordonia rubripertincta. Compounds 2a-2f exhibited low antiproliferative activity towards human peripheral blood mononuclear cells. However, it is necessary to evaluate whether all compounds are well absorbed after oral administration.

Discussion: The most promising antibacterial activity was demonstrated by derivatives possessing a 2-pyridyl substituent at the R1 position (2a-2c) or a phenyl ring at the R2 position (2a, 2f).

Conclusion: Compound 2a demonstrated the highest antibacterial activity and selectivity in inhibiting the growth of Y. enterocolitica. Additionally, it exhibited low toxicity to human lymphocytes and demonstrated favorable bioavailability parameters. Therefore, its structure can be used as a starting point for designing new antimicrobials, such as targeted therapies for yersiniosis, beyond traditional antibiotics.

导言:细菌性疾病对现代医学提出了重大挑战,因为细菌菌株的耐药性迅速发展,以及全球人口的迁移,促进了这些疾病的传播。因此,有必要开发新的策略来对抗微生物和可用作抗生素的新物质。方法:通过偕胺酮与顺丁烯酸酐反应,得到6个含有4-羟丁-2-烯酸片段的新衍生物2a-2f。采用微量稀释法研究化合物2a-2f对大肠埃希菌、小肠结肠炎耶尔森菌、铜绿假单胞菌、金黄色葡萄球菌、黄体微球菌、粪肠球菌、红带戈登菌、耻垢分枝杆菌和白色念珠菌的抑菌效果。在植物血凝素刺激的人外周血单个核细胞培养中检测了它们的抗增殖活性。利用Molinspiration软件预测新化合物的生物利用度参数。结果:衍生物2a-2c的抑菌活性最强,对小肠结肠炎耶尔森菌和黄体微球菌的抑菌活性最强。化合物2d-2f对红毛戈登的生长有抑制作用。化合物2a-2f对人外周血单核细胞表现出较低的抗增殖活性。然而,有必要评估口服后是否所有化合物都能很好地吸收。讨论:最有希望的抗菌活性是衍生物在R1位置(2a-2c)具有2-吡啶取代基或在R2位置(2a, 2f)具有苯基环。结论:化合物2a对小肠结肠炎菌的抑菌活性和抑制选择性最高。此外,它对人类淋巴细胞具有低毒性,并具有良好的生物利用度参数。因此,它的结构可以作为设计新的抗菌素的起点,如针对耶尔森菌病的靶向治疗,而不是传统的抗生素。
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引用次数: 0
Identification of Potential Dual HDAC6 and HSP90 Inhibitors for the Treatment of Cancer using Molecular Docking, Molecular Dynamics and MM/PBSA Studies: A Comprehensive In Silico Study. 利用分子对接、分子动力学和MM/PBSA研究鉴定治疗癌症的潜在双HDAC6和HSP90抑制剂:一项全面的硅研究
IF 1.9 4区 医学 Q3 CHEMISTRY, MEDICINAL Pub Date : 2025-07-07 DOI: 10.2174/0115734064388900250625121927
Muhsin Samet Yücel, İsmail Akçok

Background: Histone deacetylase 6 (HDAC6) and heat shock protein 90 (Hsp90) are crucial therapeutic targets in cancer research with their interconnected roles in regulating protein homeostasis and cellular processes. The interaction of these proteins within the cytosolic complex plays a critical role in regulating cancer cell survival and progression. Notably, current studies highlight that the simultaneous inhibition of HDAC6 and Hsp90 can produce synergistic effects and offer a promising therapeutic potential for combating malignant cancers.

Objective: The objective of this study was to explore potential compounds that can inhibit both HDAC6 and Hsp90 proteins.

Methods: In this study, a number of in-silico computational techniques were employed. A total of 791 molecules, sharing at least 30% similarity with previously identified four HDAC inhibitors, were obtained from the ZINC15 database and subjected to docking on HDAC6 and Hsp90 proteins. The top eight ligands demonstrating the best binding scores against both targets, with panobinostat and ganetespib serving as reference compounds for HDAC6 and Hsp90, respectively, were selected for further analysis. Subsequently, ADME prediction and molecular dynamics simulations were conducted on the selected ligands.

Results: A detailed molecular docking, molecular dynamics simulations and ADME studies have revealed that ZINC27653366 exhibited the highest inhibitory potential against both Hsp90 and HDAC6 target proteins, making it the most promising inhibitor.

Conclusion: In conclusion, although additional in vitro and in vivo studies are required for the validation, in silico evaluation of ZINC27653366 may position it as a promising candidate for the treatment of different types of cancers.

背景:组蛋白去乙酰化酶6 (HDAC6)和热休克蛋白90 (Hsp90)是癌症研究中重要的治疗靶点,它们在调节蛋白质稳态和细胞过程中起着相互关联的作用。这些蛋白在胞质复合体内的相互作用在调节癌细胞的生存和发展中起着关键作用。值得注意的是,目前的研究强调,同时抑制HDAC6和Hsp90可以产生协同效应,为对抗恶性肿瘤提供了很好的治疗潜力。目的:本研究的目的是探索抑制HDAC6和Hsp90蛋白的潜在化合物。方法:在本研究中,采用了一些计算机计算技术。从ZINC15数据库中共获得791个分子,与先前鉴定的4种HDAC抑制剂具有至少30%的相似性,并将其对接到HDAC6和Hsp90蛋白上。选择对这两个靶标结合得分最高的前8个配体(panobinostat和ganetespib分别作为HDAC6和Hsp90的参比化合物)进行进一步分析。随后,对所选配体进行了ADME预测和分子动力学模拟。结果:详细的分子对接、分子动力学模拟和ADME研究表明,ZINC27653366对Hsp90和HDAC6靶蛋白均表现出最高的抑制潜力,是最有前景的抑制剂。结论:总之,尽管还需要进一步的体外和体内研究来验证,但对ZINC27653366的计算机评价可能使其成为治疗不同类型癌症的有希望的候选药物。
{"title":"Identification of Potential Dual HDAC6 and HSP90 Inhibitors for the Treatment of Cancer using Molecular Docking, Molecular Dynamics and MM/PBSA Studies: A Comprehensive <i>In Silico</i> Study.","authors":"Muhsin Samet Yücel, İsmail Akçok","doi":"10.2174/0115734064388900250625121927","DOIUrl":"https://doi.org/10.2174/0115734064388900250625121927","url":null,"abstract":"<p><strong>Background: </strong>Histone deacetylase 6 (HDAC6) and heat shock protein 90 (Hsp90) are crucial therapeutic targets in cancer research with their interconnected roles in regulating protein homeostasis and cellular processes. The interaction of these proteins within the cytosolic complex plays a critical role in regulating cancer cell survival and progression. Notably, current studies highlight that the simultaneous inhibition of HDAC6 and Hsp90 can produce synergistic effects and offer a promising therapeutic potential for combating malignant cancers.</p><p><strong>Objective: </strong>The objective of this study was to explore potential compounds that can inhibit both HDAC6 and Hsp90 proteins.</p><p><strong>Methods: </strong>In this study, a number of in-silico computational techniques were employed. A total of 791 molecules, sharing at least 30% similarity with previously identified four HDAC inhibitors, were obtained from the ZINC15 database and subjected to docking on HDAC6 and Hsp90 proteins. The top eight ligands demonstrating the best binding scores against both targets, with panobinostat and ganetespib serving as reference compounds for HDAC6 and Hsp90, respectively, were selected for further analysis. Subsequently, ADME prediction and molecular dynamics simulations were conducted on the selected ligands.</p><p><strong>Results: </strong>A detailed molecular docking, molecular dynamics simulations and ADME studies have revealed that ZINC27653366 exhibited the highest inhibitory potential against both Hsp90 and HDAC6 target proteins, making it the most promising inhibitor.</p><p><strong>Conclusion: </strong>In conclusion, although additional in vitro and in vivo studies are required for the validation, in silico evaluation of ZINC27653366 may position it as a promising candidate for the treatment of different types of cancers.</p>","PeriodicalId":18382,"journal":{"name":"Medicinal Chemistry","volume":" ","pages":""},"PeriodicalIF":1.9,"publicationDate":"2025-07-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144584310","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Antioxidant and Cytotoxic Activity of the Aporphine Alkaloid (Boldine) Against DMH-induced Colorectal Carcinogenesis in Wistar Rats: An In silico, In vitro, and In vivo study. 阿波啡生物碱(Boldine)抗dmh诱导的Wistar大鼠结直肠癌的抗氧化和细胞毒活性:一项硅、体外和体内研究。
IF 1.9 4区 医学 Q3 CHEMISTRY, MEDICINAL Pub Date : 2025-07-03 DOI: 10.2174/0115734064358287250613065507
Monu Kumar Kashyap, Akash Ved, Pranay Wal, Akhand Pratap Singh
<p><strong>Objective: </strong>The objective of this study is to investigate the role of the aporphine alkaloid boldine as a potential inhibitor of specific protein targets involved in colorectal cancer, using <i>in silico</i> docking and molecular dynamics simulation studies, and to evaluate its therapeutic potential in modulating the pathological progression of colorectal cancer. In this study, we evaluated the antioxidant and cytotoxic effects of boldine using <i>in vitro</i> and <i>in vivo</i> methods.</p><p><strong>Methods: </strong>The 2-dimensional structure of boldine was retrieved from the PubChem database. Its interactions with colorectal cancer target proteins were analyzed using structures obtained from the RCSB Protein Data Bank (https://www.rcsb.org/), which provides the crystal structures of tubulin (PDB ID: 1Z2B), human NF- κB (1A3Q), human interleukin-2 (1M47), and EGFR-kinase. Molecular docking was then performed using Schrödinger software. Molecular docking and molecular dynamics (MD) simulations were conducted to evaluate Boldine's binding affinity and stability with colorectal cancer protein targets. On the Growmac platform, we performed the molecular simulation, and the simulation was only done with the highest docking score. Additionally, molecular dynamics was performed for 100 ns. Boldine was added to the colorectal cancer cell line (HCT116) at different doses, and the cytotoxic effects of the treatment were evaluated using cell viability assays. Furthermore, Boldine's capacity to scavenge reactive oxygen species (ROS) and modify the oxidative stress assay <i>in vitro</i> was used to assess its antioxidant capability. Boldine's in vivo anticancer effectiveness was examined using DMH-induced colorectal cancer in Wistar Rats. After Boldine was administered (100mg/Kg), Tumour progression, histological alteration, and oxidative stress markers were evaluated. The study aimed to ascertain how boldine affects tumor growth in DMH-inducedDMH colorectal carcinogenesis.</p><p><strong>Results: </strong>Molecular docking revealed favorable binding interactions between boldine and key targets implicated in colorectal cancer. The <i>in silico</i> data supported the hypothesis that boldine modulates essential pathways associated with cancer development. Boldine exhibited a dose-dependent reduction in colorectal cancer cell viability, indicating potential cytotoxic effects. Furthermore, boldine demonstrated antioxidant properties by effectively scavenging reactive oxygen species (ROS) and modulating oxidative stress markers in vitro. In animal models, boldine administration resulted in a significant reduction in tumor growth. Histopathological examination revealed favorable changes in tumor morphology. Additionally, boldine demonstrated antioxidant effects in vivo by modulating oxidative stress markers.</p><p><strong>Conclusion: </strong>According to this extensive study performed <i>in silico</i>, <i>in vitro</i>, and <i>in vivo</i>, bol
目的:本研究的目的是通过硅对接和分子动力学模拟研究,探讨阿啡类生物碱boldine作为结直肠癌特异性蛋白靶点的潜在抑制剂的作用,并评估其在调节结直肠癌病理进展中的治疗潜力。在本研究中,我们通过体外和体内方法评价了boldine的抗氧化和细胞毒作用。方法:从PubChem数据库中检索boldine的二维结构。利用RCSB蛋白数据库(https://www.rcsb.org/)获得的结构分析其与结直肠癌靶蛋白的相互作用,该数据库提供了微管蛋白(PDB ID: 1Z2B)、人NF- κB (1A3Q)、人白细胞介素-2 (1M47)和egfr -激酶的晶体结构。然后使用Schrödinger软件进行分子对接。通过分子对接和分子动力学(MD)模拟来评估Boldine与结直肠癌蛋白靶点的结合亲和力和稳定性。在Growmac平台上,我们进行了分子模拟,模拟只在对接得分最高的情况下进行。在100 ns的时间内进行分子动力学分析。将不同剂量的Boldine添加到结直肠癌细胞系(HCT116)中,并通过细胞活力测定来评估治疗的细胞毒性作用。此外,我们还利用Boldine清除活性氧(ROS)和修饰氧化应激的能力来评估其体外抗氧化能力。采用dmh诱导的Wistar大鼠结直肠癌,研究了Boldine的体内抗癌效果。给予Boldine (100mg/Kg)后,评估肿瘤进展、组织学改变和氧化应激标志物。该研究旨在确定在dmh诱导的dmh结直肠癌中,boldine如何影响肿瘤生长。结果:分子对接揭示了boldine与结直肠癌相关的关键靶点之间良好的结合相互作用。计算机数据支持了boldine调节与癌症发展相关的基本途径的假设。Boldine在结肠直肠癌细胞活力中表现出剂量依赖性降低,表明潜在的细胞毒性作用。此外,boldine通过在体外有效清除活性氧(ROS)和调节氧化应激标志物显示出抗氧化特性。在动物模型中,给药可显著降低肿瘤生长。组织病理学检查显示肿瘤形态发生了良好的变化。此外,boldine通过调节氧化应激标志物在体内表现出抗氧化作用。结论:根据这项在硅、体外和体内进行的广泛研究,boldine可能通过其抗氧化和细胞毒性来预防结直肠癌。这些结果鼓励了更多的研究,将泊定作为治疗结直肠癌的可行选择。它是成功地完成的,我们可以说,博林是一个有价值的补充,以结直肠癌的治疗选择。
{"title":"Antioxidant and Cytotoxic Activity of the Aporphine Alkaloid (Boldine) Against DMH-induced Colorectal Carcinogenesis in Wistar Rats: An <i>In silico, In vitro</i>, and <i>In vivo</i> study.","authors":"Monu Kumar Kashyap, Akash Ved, Pranay Wal, Akhand Pratap Singh","doi":"10.2174/0115734064358287250613065507","DOIUrl":"https://doi.org/10.2174/0115734064358287250613065507","url":null,"abstract":"&lt;p&gt;&lt;strong&gt;Objective: &lt;/strong&gt;The objective of this study is to investigate the role of the aporphine alkaloid boldine as a potential inhibitor of specific protein targets involved in colorectal cancer, using &lt;i&gt;in silico&lt;/i&gt; docking and molecular dynamics simulation studies, and to evaluate its therapeutic potential in modulating the pathological progression of colorectal cancer. In this study, we evaluated the antioxidant and cytotoxic effects of boldine using &lt;i&gt;in vitro&lt;/i&gt; and &lt;i&gt;in vivo&lt;/i&gt; methods.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Methods: &lt;/strong&gt;The 2-dimensional structure of boldine was retrieved from the PubChem database. Its interactions with colorectal cancer target proteins were analyzed using structures obtained from the RCSB Protein Data Bank (https://www.rcsb.org/), which provides the crystal structures of tubulin (PDB ID: 1Z2B), human NF- κB (1A3Q), human interleukin-2 (1M47), and EGFR-kinase. Molecular docking was then performed using Schrödinger software. Molecular docking and molecular dynamics (MD) simulations were conducted to evaluate Boldine's binding affinity and stability with colorectal cancer protein targets. On the Growmac platform, we performed the molecular simulation, and the simulation was only done with the highest docking score. Additionally, molecular dynamics was performed for 100 ns. Boldine was added to the colorectal cancer cell line (HCT116) at different doses, and the cytotoxic effects of the treatment were evaluated using cell viability assays. Furthermore, Boldine's capacity to scavenge reactive oxygen species (ROS) and modify the oxidative stress assay &lt;i&gt;in vitro&lt;/i&gt; was used to assess its antioxidant capability. Boldine's in vivo anticancer effectiveness was examined using DMH-induced colorectal cancer in Wistar Rats. After Boldine was administered (100mg/Kg), Tumour progression, histological alteration, and oxidative stress markers were evaluated. The study aimed to ascertain how boldine affects tumor growth in DMH-inducedDMH colorectal carcinogenesis.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Results: &lt;/strong&gt;Molecular docking revealed favorable binding interactions between boldine and key targets implicated in colorectal cancer. The &lt;i&gt;in silico&lt;/i&gt; data supported the hypothesis that boldine modulates essential pathways associated with cancer development. Boldine exhibited a dose-dependent reduction in colorectal cancer cell viability, indicating potential cytotoxic effects. Furthermore, boldine demonstrated antioxidant properties by effectively scavenging reactive oxygen species (ROS) and modulating oxidative stress markers in vitro. In animal models, boldine administration resulted in a significant reduction in tumor growth. Histopathological examination revealed favorable changes in tumor morphology. Additionally, boldine demonstrated antioxidant effects in vivo by modulating oxidative stress markers.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Conclusion: &lt;/strong&gt;According to this extensive study performed &lt;i&gt;in silico&lt;/i&gt;, &lt;i&gt;in vitro&lt;/i&gt;, and &lt;i&gt;in vivo&lt;/i&gt;, bol","PeriodicalId":18382,"journal":{"name":"Medicinal Chemistry","volume":" ","pages":""},"PeriodicalIF":1.9,"publicationDate":"2025-07-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144575787","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Medicinal Chemistry
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