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Syntheses and Identification of New Dithiophosphinic Acid Complexes and Their Potential as Photodynamic Agents in Cancer Therapy. 新型二硫代膦酸配合物的合成、鉴定及其在癌症治疗中的光动力作用。
IF 1.9 4区 医学 Q3 CHEMISTRY, MEDICINAL Pub Date : 2025-07-03 DOI: 10.2174/0115734064382461250618113452
Kübra A Coşkun, Elif Bulat, Hamza Yılmaz, Ertuğrul Gazi Sağlam, Lutfi Tutar, Fayyaz Ur Rehman, Yusuf Tutar

Background: The photo-efficacy of oncological phototherapy for both internal and external tumors is encouraging. When light and photochemotherapeutic drugs are applied together, precise cancer targeting, minimal invasiveness, and innovative modes of action are made possible. Current developments in photoactive compounds and new light sources are promising for further advancement.

Objective: When designing photosensitizers, metal complexes may be advantageous since the metal can enhance stability and photocytotoxicity while facilitating their localization and quantification. The absorption spectra of photosensitizers limit their excitation wavelengths, which impact light tissue penetration that differs in various organs. Since longer wavelength light penetrates deeper, PDT is typically carried out at wavelengths greater than 620 nm. Additionally, employing lower intensity (>4-8 J/cm2) energy can greatly lessen the pain and discomfort induced by red-light PDT.

Methods: Low-level laser therapy exposure was used to assess the dithiophosphinic acid complexes' photodynamic treatment efficacy in MCF-7 cells. Following the administration of the complexes at concentrations within IC50 values, red light (4 J, 780 nm) was applied to the cells. Afterward, MCF-7 cells were cultured for 24 hours to evaluate the photodynamic effects of the compounds on cancer cells. Cell viability was assessed using the XTT assay kit.

Results: DTPA complexes have shown effectiveness as photodynamic agents in cancer therapy, with Ni(II) and Ni(II)-pyridine complexes demonstrating significant cytotoxicity against cancer cells.

Conclusion: Light-activated cancer cell therapies are promising, and the synthesized complexes affect the cell cycle and apoptosis-regulating proteins. The compounds can be employed as anticancer agents and a fine starting template for photodynamic drug design.

背景:肿瘤光疗治疗内外肿瘤的光效令人鼓舞。当光和光化学治疗药物一起应用时,精确的癌症靶向,最小的侵入性和创新的作用模式成为可能。目前在光活性化合物和新光源方面的进展有进一步发展的希望。目的:在设计光敏剂时,金属配合物可能具有优势,因为金属配合物可以增强光敏剂的稳定性和光细胞毒性,同时易于定位和定量。光敏剂的吸收光谱限制了其激发波长,这影响了光组织在不同器官中的穿透性。由于波长较长的光穿透更深,PDT通常在波长大于620nm的情况下进行。此外,采用较低的能量强度(>4-8 J/cm2)可以大大减轻红光PDT引起的疼痛和不适。方法:采用低强度激光照射法评价二硫代膦酸配合物对MCF-7细胞的光动力治疗效果。在IC50浓度范围内给药后,对细胞施加红光(4 J, 780 nm)。随后,培养MCF-7细胞24小时,以评估化合物对癌细胞的光动力学作用。采用XTT检测试剂盒检测细胞活力。结果:DTPA配合物作为光动力药物在癌症治疗中显示出有效性,Ni(II)和Ni(II)-吡啶配合物对癌细胞显示出显著的细胞毒性。结论:光激活肿瘤细胞的治疗前景广阔,其合成的复合物影响细胞周期和凋亡调节蛋白。这些化合物可以用作抗癌剂和光动力药物设计的良好起始模板。
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引用次数: 0
Promising Flavone Derivatives as Anticancer Agents. 黄酮衍生物作为抗癌剂的前景。
IF 1.9 4区 医学 Q3 CHEMISTRY, MEDICINAL Pub Date : 2025-07-02 DOI: 10.2174/0115734064384513250624043626
Vishakha A Patil, Kalyani R Thombre, Krishna Radheshyam Gupta, Milind Janrao Umekar

Currently, the main focus of anticancer drug development and research is to develop anticancer treatment strategies that are both less harmful and more effective. Flavones, a subclass of flavonoids, have shown great promise in the advancement of anticancer drugs because of their strong bioactive properties. Fruits, vegetables, and medicinal plants are abundant sources of these naturally occurring compounds, which have a variety of biological activities such as anti-inflammatory, anti-cancer, and antioxidant properties. Flavones and their derivatives have attracted a lot of attention recently because of their potential to modify significant molecular pathways that are involved in the growth, apoptosis, angiogenesis, and metastasis of cancer cells. The objective of this review is to present a thorough analysis of the chemical makeup of flavone as an anticancer agent. By altering the flavone scaffold's structure, there are beneficial chances to improve its therapeutic qualities, such as its potency, selectivity, and pharmacokinetics. The structural alterations of flavone derivatives that improve their anticancer potency and selectivity are highlighted. Most noteworthy, flavones offer a promising framework for the creation of new anticancer medications, and further research into them may help create more potent and focused cancer treatments.

目前,抗癌药物开发和研究的主要焦点是开发危害更小、更有效的抗癌治疗策略。黄酮类化合物是黄酮类化合物的一个亚类,由于其具有很强的生物活性,在抗癌药物的发展中显示出很大的前景。水果、蔬菜和药用植物是这些天然化合物的丰富来源,它们具有多种生物活性,如抗炎、抗癌和抗氧化特性。近年来,黄酮及其衍生物引起了人们的广泛关注,因为它们有可能改变与癌细胞生长、凋亡、血管生成和转移有关的重要分子途径。本文综述的目的是全面分析作为抗癌剂的黄酮的化学组成。通过改变黄酮支架的结构,有机会改善其治疗质量,如其效力、选择性和药代动力学。强调了黄酮衍生物的结构改变,提高了其抗癌效力和选择性。最值得注意的是,黄酮为创造新的抗癌药物提供了一个有希望的框架,对它们的进一步研究可能有助于创造更有效、更有针对性的癌症治疗方法。
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引用次数: 0
Exploring the Cholinesterase Inhibitory Potential of Azines Bearing a 4,4-bisdimethylaminobenzophenone Scaffold: An Experimental and Computational Approach. 探索含4,4-二二甲氨基苯甲酮支架的氮嘧啶的胆碱酯酶抑制潜能:实验和计算方法。
IF 1.9 4区 医学 Q3 CHEMISTRY, MEDICINAL Pub Date : 2025-06-24 DOI: 10.2174/0115734064375363250620173232
Ghulam Ahad, Aftab Alam, Ahmed A Elhenawy, Imtiaz Ahmad, Fayaz Ur Rahman, Munir Ur Rehman, Abid Ali, Abdullah F AlAsmari, Fawaz Alasmari, Momin Khan

Background: Acetyl and butyrylcholinesterase are significant enzymes involved in neurological diseases, and the development of more effective inhibitors is crucial for beneficial interference.

Objective: To evaluate the cholinesterase inhibition effect of the synthetic bis-Schiff base compounds and discover the electronic properties as well as binding affinities through computational studies.

Methods: The compounds were synthesized and screened against acetyl and butyrylcholinesterase inhibitory activities in-vitro, while DFT analysis and molecular docking studies were performed for the product compounds.

Results: Seven compounds, including 2a, 2b, 2e, 2c, 2d, 2i, and 2j, exhibited excellent AChE activity, while nine compounds showed potent BChE inhibition compared to galantamine (IC50 = 156.4 ± 1.13 μM). Furthermore, the recent study on molecules 2a-e has provided valuable insights into their mechanism of action as inhibitors of the enzyme ChE, which is crucial for understanding how to regulate this enzyme's activity. Through the use of Time-Dependent Density Functional Theory (TD-DFT), the electronic characteristics of these molecules were meticulously examined, revealing that the Highest Occupied Molecular Orbitals (HOMO) are extensively delocalized across the molecular frameworks of the most active 2a-e compounds. This suggests a significant degree of electron delocalization, which is often associated with chemical reactivity and stability. In comparison to standard galantamine, these compounds demonstrate a lower electrophilicity index, which is indicative of their increased biological efficacy and lower toxicity.

Conclusion: These derivatives showed excellent AChE and BChE activities with favorable electronic properties and superior binding affinities, highlighting their potential as effective inhibitors as therapeutic agents.

背景:乙酰和丁基胆碱酯酶是神经系统疾病的重要酶,开发更有效的抑制剂对有益干预至关重要。目的:评价合成的双希夫碱化合物对胆碱酯酶的抑制作用,并通过计算研究发现其电子性质和结合亲和力。方法:对合成的化合物进行体外乙酰胆碱酯酶和丁基胆碱酯酶抑制活性筛选,并对产物化合物进行DFT分析和分子对接研究。结果:7个化合物(2a、2b、2e、2c、2d、2i和2j)表现出较好的AChE活性,9个化合物对BChE有较强的抑制作用(IC50 = 156.4±1.13 μM)。此外,最近对2a-e分子的研究为其作为ChE酶抑制剂的作用机制提供了有价值的见解,这对于理解如何调节该酶的活性至关重要。通过使用时间依赖密度泛函理论(TD-DFT),仔细检查了这些分子的电子特性,揭示了最高已占据分子轨道(HOMO)在最活跃的2a-e化合物的分子框架中广泛地离域。这表明了电子离域的显著程度,这往往与化学反应性和稳定性有关。与标准加兰他明相比,这些化合物的亲电性指数较低,这表明它们的生物功效更高,毒性更低。结论:这些衍生物具有良好的AChE和BChE活性,具有良好的电子性质和良好的结合亲和力,具有作为有效抑制剂和治疗剂的潜力。
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引用次数: 0
Optimized Strategies for the Synthesis and Structure-Activity Relationship of Imidazole as an Antiepileptic Drug. 抗癫痫药物咪唑的合成及构效关系优化。
IF 1.9 4区 医学 Q3 CHEMISTRY, MEDICINAL Pub Date : 2025-06-10 DOI: 10.2174/0115734064377779250529172030
Saloni Mangal, Salahuddin, Avijit Mazumder, Rajnish Kumar, Sapna Rani, Vimal Datt, Mohamed Jawed Ahsan, Mohammad Shahar Yar

Imidazole is believed to be a highly multifunctional compound in the medicinal and biological sectors. This literature focuses on information about the synthesis and anticonvulsant activity presented by the imidazole nucleus. Epilepsy is a chronic brain disorder including multiple seizures and brain cell abnormalities. Due to its old and less effective treatment, with the increase in the number of patients suffering from epilepsy, researchers need to concentrate on the emergence of finding new treatments for epilepsy. Imidazole-containing analogs are found to be significant in the field of medicinal chemistry and the treatment for epilepsy. These studies prompted us to synthesize and provide insights into developing new imidazole-bearing antiepileptic drugs.

咪唑被认为是一种在医药和生物领域具有高度多功能的化合物。本文献主要介绍咪唑核的合成和抗惊厥活性。癫痫是一种慢性脑部疾病,包括多次发作和脑细胞异常。由于其治疗方法陈旧且效果不佳,随着癫痫患者数量的增加,研究人员需要集中精力寻找新的癫痫治疗方法的出现。含咪唑类似物在药物化学和癫痫治疗领域具有重要意义。这些研究促使我们合成并为开发新的含咪唑抗癫痫药物提供见解。
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引用次数: 0
Novel Pyrrolopyrimidines as Inhibitors of CLK4 and HER2: Targeting Promising Anticancer Pathways. 新型吡咯嘧啶作为CLK4和HER2抑制剂:靶向有希望的抗癌途径
IF 1.9 4区 医学 Q3 CHEMISTRY, MEDICINAL Pub Date : 2025-06-03 DOI: 10.2174/0115734064386606250410111952
Jonathan Gries, Frank Totzke, Andreas Hilgeroth

Background: Dysregulated cellular signaling pathways involving protein kinases are critically implicated in cancer development. Consequently, protein kinases have emerged as key targets for novel anticancer therapies. A range of kinase inhibitors, including small molecules and monoclonal antibodies, has been developed. Although early strategies focused on achieving high specificity to minimize adverse effects, resistance to these targeted therapies has limited their effectiveness. As a result, broader-spectrum inhibitors that act on multiple cancer-related kinases are now considered more promising therapeutic options.

Objective: We developed twenty-five new pyrrolopyrimidine derivatives featuring diverse substitution patterns to assess their potential as small-molecule inhibitors of the protein kinases CLK4 and HER2, both of which are significant therapeutic targets in metastatic breast cancer.

Method: Pyrrolopyrimidine derivatives were synthesized and purified by column chromatography. Their protein kinase inhibitory activity was evaluated through a radioactive ATPcompetition assay.

Results: The compounds were obtained through a multi-step synthetic procedure, concluding with substitution reactions. The effects of different substituents on the inhibitory properties of the observed protein kinases are analyzed and discussed.

Conclusion: Aniline-substituted derivatives exhibited the most potent activities, which were further modulated by N-substituted pyrroles. Consequently, we identified both selective and dual inhibitors of the target kinases, demonstrating activity in the nanomolar range.

背景:涉及蛋白激酶的细胞信号通路失调与癌症的发展有重要关系。因此,蛋白激酶已成为新型抗癌疗法的关键靶点。一系列激酶抑制剂,包括小分子和单克隆抗体,已经被开发出来。尽管早期的策略侧重于实现高特异性以尽量减少不良反应,但对这些靶向治疗的耐药性限制了它们的有效性。因此,作用于多种癌症相关激酶的广谱抑制剂现在被认为是更有希望的治疗选择。目的:我们开发了25种具有不同取代模式的新型吡咯嘧啶衍生物,以评估它们作为蛋白激酶CLK4和HER2小分子抑制剂的潜力,这两种蛋白激酶都是转移性乳腺癌的重要治疗靶点。方法:合成吡咯嘧啶衍生物,采用柱层析法纯化。通过放射性atp竞争试验评估其蛋白激酶抑制活性。结果:该化合物经过多步合成,以取代反应结束。分析和讨论了不同取代基对所观察到的蛋白激酶抑制性能的影响。结论:苯胺取代衍生物的活性最强,n取代吡咯进一步调节了苯胺取代衍生物的活性。因此,我们确定了选择性和双重抑制剂的目标激酶,显示在纳摩尔范围内的活性。
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引用次数: 0
Potential Inhibitors of SARS-CoV-2 Developed through Machine Learning, Molecular Docking, and MD Simulation. 通过机器学习、分子对接和MD模拟发现潜在的SARS-CoV-2抑制剂。
IF 1.9 4区 医学 Q3 CHEMISTRY, MEDICINAL Pub Date : 2025-06-03 DOI: 10.2174/0115734064370188250527043536
Arshiya Khan, Anushka Bhrdwaj, Khushboo Sharma, Ravali Arugonda, Navpreet Kaur, Rinku Chaudhary, Uzma Shaheen, Umesh Panwar, V Natchimuthu, Abhishek Kumar, Taniya Dey, Aravind Panicker, Leena Prajapati, Nhattuketty Krishnan Shainy, Muhammed Marunnan Sahila, Francisco Jaime Bezerra Mendonça Junior, Tajamul Hussain, Salman Alrokayan, Anuraj Nayarisseri
<p><strong>Background: </strong>The advent of Severe Acute Respiratory Syndrome coronavirus 2 (SARS-CoV-2), the etiological agent of the Coronavirus Disease 2019 (COVID-19) pandemic, has impacted physical and mental health worldwide. The lack of effective antiviral drugs necessitates a robust therapeutic approach to develop anti-SARS-CoV-2 drugs. Various investigations have recognized ACE2 as the primary receptor of SARS-CoV-2, and this amalgamation of ACE2 with the spike protein of the coronavirus is paramount for viral entry into the host cells and inducing infection. Consequently, restricting the virus's accessibility to ACE2 offers an alternative therapeutic approach to averting this illness.</p><p><strong>Objective: </strong>The study aimed to identify potent inhibitors with enhanced affinity for the ACE2 protein and validate their stability and efficacy against established inhibitors via molecular docking, machine learning, and MD simulations.</p><p><strong>Methodology: </strong>202 ACE2 inhibitors (PDB ID and 6LZG), comprising repurposed antiviral compounds and specific ACE2 inhibitors, were selected for molecular docking. The two most effective compounds obtained from docking were further analyzed using machine learning to identify potential compounds with enhanced ACE2-binding affinity. To refine the dataset, molecular decoys were generated through the Database of Useful Decoys: Enhanced (DUD-E) server, and Singular Value Decomposition (SVD) was applied for data preprocessing. The Tree-based Pipeline Optimization Tool (TPOT) was then utilized to optimize the machine learning pipeline. The most promising ML-predicted compounds were re-evaluated through docking and subjected to Molecular Dynamics (MD) simulations to evaluate their structural stability and interactions with ACE2. Finally, these compounds were evaluated against the top two pre-established inhibitors using various computational tools.</p><p><strong>Results: </strong>The two best pre-established inhibitors were identified as Birinapant and Elbasvir, while the best machine-learning-predicted compounds were PubChem ID: 23658468 and PubChem ID: 117637105. Pharmacophore studies were conducted on the most effective machine-learning-predicted compounds, followed by a comparative ADME/T analysis between the best ML-screened and pre-established inhibitors. The results indicated that the top ML compound (PubChem ID: 23658468) demonstrated favorable BBB permeability and a high HIA index, highlighting its potential for therapeutic applications. The ML-screened ligand demonstrated structural stability with an RMSD (0.24 nm) and greater global stability (Rg: 2.08 nm) than Birinapant. Hydrogen bonding interactions further validated their strong binding affinity. MM/PBSA analysis confirmed the ML-screened compound's stronger binding affinity, with a binding free energy of - 132.90 kcal/mol, indicating enhanced stability in complex formation.</p><p><strong>Conclusion: </strong>The results emp
背景:2019冠状病毒病(COVID-19)大流行的病原——严重急性呼吸综合征冠状病毒2 (SARS-CoV-2)的出现已经影响了全世界的身心健康。由于缺乏有效的抗病毒药物,需要强有力的治疗方法来开发抗sars - cov -2药物。各种研究已经确认ACE2是SARS-CoV-2的主要受体,并且这种ACE2与冠状病毒刺突蛋白的融合对于病毒进入宿主细胞并诱导感染至关重要。因此,限制病毒对ACE2的可及性为避免这种疾病提供了另一种治疗方法。目的:该研究旨在通过分子对接、机器学习和MD模拟来鉴定对ACE2蛋白具有增强亲和力的有效抑制剂,并验证其对已建立抑制剂的稳定性和有效性。方法:选择202个ACE2抑制剂(PDB ID和6LZG)进行分子对接,这些抑制剂包括重组抗病毒化合物和特异性ACE2抑制剂。通过对接获得的两种最有效的化合物进一步使用机器学习进行分析,以识别具有增强ace2结合亲和力的潜在化合物。为了细化数据集,通过有用诱饵数据库增强(ddu - e)服务器生成分子诱饵,并应用奇异值分解(SVD)对数据进行预处理。然后利用基于树的管道优化工具(TPOT)对机器学习管道进行优化。通过对接和分子动力学(MD)模拟对最有希望的ml预测化合物进行重新评估,以评估其结构稳定性和与ACE2的相互作用。最后,使用各种计算工具对这些化合物与前两种预先建立的抑制剂进行评估。结果:两种最佳的预建立抑制剂被确定为Birinapant和Elbasvir,而最佳的机器学习预测化合物是PubChem ID: 23658468和PubChem ID: 117637105。对最有效的机器学习预测化合物进行药效团研究,然后对ml筛选的最佳抑制剂和预先建立的抑制剂进行比较ADME/T分析。结果表明,顶部ML化合物(PubChem ID: 23658468)表现出良好的血脑屏障通透性和高HIA指数,突出了其治疗应用潜力。与Birinapant相比,ml筛选的配体结构稳定,RMSD (0.24 nm),全局稳定性(Rg: 2.08 nm)更高。氢键相互作用进一步验证了它们的强结合亲和力。MM/PBSA分析证实,ml筛选的化合物具有更强的结合亲和力,结合自由能为- 132.90 kcal/mol,表明复合物形成的稳定性增强。结论:研究结果强调了分子对接、机器学习和分子动力学模拟在促进新型抑制剂快速鉴定中的作用。PubChem ID: 23658468显示出与ACE2的强大结合亲和力和良好的药代动力学特性,使其成为进一步研究的有希望的候选者。
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引用次数: 0
Research Progress of G Protein-coupled Receptor 52 on Central Nervous System Diseases. G蛋白偶联受体52在中枢神经系统疾病中的研究进展
IF 1.9 4区 医学 Q3 CHEMISTRY, MEDICINAL Pub Date : 2025-05-27 DOI: 10.2174/0115734064372441250527031957
Qingkun Wu, Jun Li, Xiaojie Hu, Ying Zhuang, Lu Zheng

The G protein-coupled receptor 52 (GPR52) is a Gs-coupled receptor and is located principally in the striatum alongside D2 receptor and in the pre-frontal cortex alongside D1 receptor. Its stimulation leads to potentiation of intracellular cAMP levels, producing effects on cAMP levels similar to those of a Gi-coupled D2 receptor antagonist in the striatum and a Gscoupled D1 receptor agonist in the prefrontal cortex. This dual mechanism suggests that GPR52 activation could result in antipsychotic effects akin to D2 antagonism and pro-cognitive effects resembling D1 agonism. As a result, GPR52 has emerged as a promising therapeutic target for central nervous system (CNS) disorders, including schizophrenia and substance use disorder. Additionally, knocking out (KO) GPR52 not only significantly reduces mutant huntingtin protein (mHTT) levels in the striatum but also rescues Huntington's disease-associated behavioral phenotypes in a knock-in Huntington's disease mouse model, which provides evidence that GRP52 may also serve as a potential target for Huntington's disease. This review summarizes the current state of small-molecule ligand/drug discovery for GPR52, focusing on the latest findings about the role of GPR52 in schizophrenia and Huntington's disease.

G蛋白偶联受体52 (GPR52)是一种gs偶联受体,主要分布于纹状体和D2受体以及前额皮质和D1受体。它的刺激导致细胞内cAMP水平的增强,对cAMP水平的影响类似于纹状体中的gi偶联D2受体拮抗剂和前额皮质中的g偶联D1受体激动剂。这一双重机制表明,激活GPR52可能导致类似D2拮抗剂的抗精神病作用和类似D1拮抗剂的促认知作用。因此,GPR52已成为中枢神经系统(CNS)疾病(包括精神分裂症和物质使用障碍)的有希望的治疗靶点。此外,敲除(KO) GPR52不仅可以显著降低纹状体中突变的亨廷顿蛋白(mHTT)水平,还可以在敲入亨廷顿病小鼠模型中挽救亨廷顿病相关的行为表型,这为GRP52也可能作为亨廷顿病的潜在靶点提供了证据。本文综述了GPR52小分子配体/药物的研究现状,重点介绍了GPR52在精神分裂症和亨廷顿病中作用的最新发现。
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引用次数: 0
Discovering the Cholinesterase Inhibitory Potential of Thiosemicarbazone Derivatives through In vitro, Molecular Docking, Kinetics, and Dynamics Studies. 通过体外、分子对接、动力学和动力学研究发现硫代氨基脲衍生物的胆碱酯酶抑制潜力。
IF 1.9 4区 医学 Q3 CHEMISTRY, MEDICINAL Pub Date : 2025-05-12 DOI: 10.2174/0115734064375028250427171931
Manel Essid, Aftab Alam, Ghulam Fareed, Sudais Rahman, Imtiaz Ahmad, Imen Zghab, Zainab Hassan Alnakhli, Abid Ali, Masroor Kamal, Momin Khan

Background: The current study explored the cholinesterase inhibitory activities of some thiosemicarbazone derivatives bearing 2,4-dichloro phenylacetic acid scaffold.

Objective: This study aimed to screen the synthesized derivatives for their in vitro acetylcholine and butyrylcholinesterase inhibition.

Methods: These compounds were synthesized by refluxing 2,4-dichloro phenylacetic acid with sulfuric acid in ethanol to get the ester, which was further refluxed with thiosemicarbazide in ethanol to get the desired compound (2). Different benzaldehydes were treated with compound (2) in ethanol having a catalytic amount of acetic acid to get thiosemicarbazones.

Results: In the series, seven compounds, including compounds 2c, 2a, 2b, 2d, 2g, 2e, and 2f, displayed excellent acetylcholinesterase inhibition activities in the range of IC50 values from 41.51 ± 3.88 to 95.48 ± 0.70 μM, surpassing than the standard galantamine (IC50 = 104.5 ± 1.20 μM). Also, compounds 2a, 2g, 2h, 2f, 2b, and 2d with IC50 values ranging from 64.47 ± 2.74 to 80.62 ± 0.73 μM exhibited potent inhibition against butyrylcholinesterase enzyme, being similar to the standard galantamine (IC50 = 156.8 ± 1.50 μM). The molecular docking investigation was performed to assess the binding affinity of the compounds with the active site of the enzyme. These compounds, along with the docked complexes, specifically AChE-compound 2a and BuChE-compound 2g, were chosen and subjected to 100-nanosecond molecular dynamics simulations. The simulations demonstrated strong stability of the ligands within the active pockets of AChE and BuChE enzymes.

Conclusion: These derivatives exhibited superior acetylcholinesterase and butyrylcholinesterase inhibitory activities compared to galantamine, with molecular docking and dynamic simulations confirming their strong binding affinity with the active sites of the enzymes.

背景:本研究探讨了以2,4-二氯苯乙酸为支架的某些硫代氨基脲衍生物的胆碱酯酶抑制活性。目的:筛选合成的乙酰胆碱和丁基胆碱酯酶衍生物的体外抑制作用。方法:以2,4-二氯苯乙酸为原料,用硫酸在乙醇中回流制得酯,再用氨基硫脲在乙醇中回流制得所需化合物(2)。用化合物(2)在乙酸催化量的乙醇中处理不同的苯甲醛,得到硫代氨基脲。结果:化合物2c、2a、2b、2d、2g、2e、2f 7个化合物对乙酰胆碱酯酶的抑制活性较好,IC50范围为41.51±3.88 ~ 95.48±0.70 μM,优于标准品加兰他明(IC50 = 104.5±1.20 μM)。化合物2a、2g、2h、2f、2b和2d的IC50值在64.47±2.74 ~ 80.62±0.73 μM范围内,与标准加兰他明的IC50值(156.8±1.50 μM)相似,对丁基胆碱酯酶的抑制作用较强。通过分子对接研究来评估化合物与酶活性位点的结合亲和力。选择这些化合物,以及对接的配合物,特别是ache -化合物2a和buch -化合物2g,并进行100纳秒的分子动力学模拟。模拟结果表明,这些配体在AChE和BuChE酶的活性口袋内具有很强的稳定性。结论:与加兰他敏相比,这些衍生物具有更强的乙酰胆碱酯酶和丁基胆碱酯酶抑制活性,分子对接和动态模拟证实了它们与酶活性位点的强结合亲和力。
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引用次数: 0
Synthesis, Characterization, and Pharmacological Evaluation of Zn4O(BDC)3: Anticancer, Antidiabetic, and Drug Delivery Potential. zn40o (BDC)3的合成、表征和药理评价:抗癌、降糖和给药潜力
IF 1.9 4区 医学 Q3 CHEMISTRY, MEDICINAL Pub Date : 2025-05-08 DOI: 10.2174/0115734064362203250222050726
Sabir Khan, Muhammad Fazal Hameed, Imran Zafar, Rubina Bibi, Mohamed Mohany, Sadia Nazir, Mohammad Amjad Kamal, Muhammad Shafiq

Introduction: This study presents a comprehensive exploration of the biomedical potential of the synthesized metal-organic framework Zn4O(BDC)3, focusing on its applications in cancer and diabetes treatment and its advanced drug delivery capabilities.

Methods: The structural and physicochemical properties of Zn4O(BDC)3 were characterized using FTIR, TGA, 1H NMR, PXRD, and elemental analysis, revealing its exceptional stability and coordination properties. Molecular docking, molecular dynamics simulations (100 ns), and MM-GBSA calculations were performed to assess binding affinities and stability.

Results: The interactions of Zn4O(BDC)3 with salmon sperm DNA (SSDNA) and bovine serum albumin (BSA) demonstrated significant anticancer potential, evidenced by binding constant values of 6.0 × 106M-1 and Gibbs free energy changes of -17.93 and -19.61 kcal/mol, respectively, highlighting its ability to suppress tumor cell proliferation. With doxorubicin (DOX) loading and reloading efficiencies of 88% and 87.5%, Zn4O(BDC)3 exhibited superior drug delivery capabilities. The anti-diabetic potential was validated by the formation of human insulin (HI) hexamers with ΔG values of 0.8 ± 0.1 and a significant decrease in absorption intensity (5.8 to 0.05 at 250 nm). Molecular docking studies revealed moderate to high binding affinities (-10.0 to -5.3 kcal/mol) with biomolecular targets, supported by molecular dynamics simulations over 100 ns and MM-GBSA calculations indicating robust stability (ΔG = -33.31 kcal/mol).

Conclusion: These in-silico and in-vitro analyses underscore the significant pharmacological promise of Zn4O(BDC)3 as a multifunctional agent for anticancer, antidiabetic, and drug delivery applications.

本研究全面探索了合成的金属-有机骨架zn40o (BDC)3的生物医学潜力,重点研究了其在癌症和糖尿病治疗中的应用及其先进的给药能力。方法:采用FTIR、TGA、1H NMR、PXRD和元素分析等手段对zn40o (BDC)3的结构和理化性质进行表征,揭示其优异的稳定性和配位性。通过分子对接、分子动力学模拟(100 ns)和MM-GBSA计算来评估结合亲和力和稳定性。结果:zn40o (BDC)3与鲑鱼精子DNA (SSDNA)和牛血清白蛋白(BSA)的结合常数分别为6.0 × 106M-1,吉布斯自由能变化分别为-17.93和-19.61 kcal/mol,显示出明显的抗癌作用,表明其具有抑制肿瘤细胞增殖的能力。zn40o (BDC)3的载药和再载药效率分别为88%和87.5%,表现出优异的给药能力。通过形成人胰岛素(HI)六聚体(ΔG值为0.8±0.1)和吸收强度显著降低(在250 nm处为5.8 ~ 0.05)来验证其抗糖尿病潜能。分子对接研究表明,与生物分子靶标具有中等至高的结合亲和性(-10.0至-5.3 kcal/mol), 100 ns以上的分子动力学模拟和MM-GBSA计算表明,其稳定性很强(ΔG = -33.31 kcal/mol)。结论:这些计算机和体外分析强调了zn40o (BDC)3作为抗癌、降糖和给药应用的多功能药物的重要药理前景。
{"title":"Synthesis, Characterization, and Pharmacological Evaluation of Zn<sub>4</sub>O(BDC)<sub>3</sub>: Anticancer, Antidiabetic, and Drug Delivery Potential.","authors":"Sabir Khan, Muhammad Fazal Hameed, Imran Zafar, Rubina Bibi, Mohamed Mohany, Sadia Nazir, Mohammad Amjad Kamal, Muhammad Shafiq","doi":"10.2174/0115734064362203250222050726","DOIUrl":"https://doi.org/10.2174/0115734064362203250222050726","url":null,"abstract":"<p><strong>Introduction: </strong>This study presents a comprehensive exploration of the biomedical potential of the synthesized metal-organic framework Zn<sub>4</sub>O(BDC)<sub>3</sub>, focusing on its applications in cancer and diabetes treatment and its advanced drug delivery capabilities.</p><p><strong>Methods: </strong>The structural and physicochemical properties of Zn<sub>4</sub>O(BDC)<sub>3</sub> were characterized using FTIR, TGA, <sup>1</sup>H NMR, PXRD, and elemental analysis, revealing its exceptional stability and coordination properties. Molecular docking, molecular dynamics simulations (100 ns), and MM-GBSA calculations were performed to assess binding affinities and stability.</p><p><strong>Results: </strong>The interactions of Zn<sub>4</sub>O(BDC)<sub>3</sub> with salmon sperm DNA (SSDNA) and bovine serum albumin (BSA) demonstrated significant anticancer potential, evidenced by binding constant values of 6.0 × 10<sup>6</sup>M<sup>-1</sup> and Gibbs free energy changes of -17.93 and -19.61 kcal/mol, respectively, highlighting its ability to suppress tumor cell proliferation. With doxorubicin (DOX) loading and reloading efficiencies of 88% and 87.5%, Zn<sub>4</sub>O(BDC)<sub>3</sub> exhibited superior drug delivery capabilities. The anti-diabetic potential was validated by the formation of human insulin (HI) hexamers with ΔG values of 0.8 ± 0.1 and a significant decrease in absorption intensity (5.8 to 0.05 at 250 nm). Molecular docking studies revealed moderate to high binding affinities (-10.0 to -5.3 kcal/mol) with biomolecular targets, supported by molecular dynamics simulations over 100 ns and MM-GBSA calculations indicating robust stability (ΔG = -33.31 kcal/mol).</p><p><strong>Conclusion: </strong>These <i>in-silico</i> and <i>in-vitro</i> analyses underscore the significant pharmacological promise of Zn<sub>4</sub>O(BDC)<sub>3</sub> as a multifunctional agent for anticancer, antidiabetic, and drug delivery applications.</p>","PeriodicalId":18382,"journal":{"name":"Medicinal Chemistry","volume":" ","pages":""},"PeriodicalIF":1.9,"publicationDate":"2025-05-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144009281","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Screening of Novel Inhibitors Targeting the Non-ATP-binding Domain of Staphylococcus aureus SecA1. 靶向金黄色葡萄球菌SecA1非atp结合域的新型抑制剂的筛选
IF 1.9 4区 医学 Q3 CHEMISTRY, MEDICINAL Pub Date : 2025-05-08 DOI: 10.2174/0115734064370398250426162503
Yan Liu, Qing Su, Zonglin Wang, Peiyao Liu, Jinjin Hong, Hyuk-Kyu Seoh, Xu Jia, Sen-Fang Sui, Phang-Cheng Tai, Xinhe Huang

Objective: Staphylococcus aureus (S. aureus) has been one of the pathogenic bacteria for clinical infections, and there is an urgent need for the development of novel anti-S. aureus drugs. SecA is a conserved and essential protein in bacteria and is considered as an ideal target for development. Current screening of inhibitors against SecA has focused on the ATP-binding structural domain, which increases the risk of drug side effects, so a novel screening strategy based on the non-ATP-binding structural domain was chosen in this paper.

Methods: A three-dimensional structural model of S. aureus SecA1N75 was constructed, and molecular docking was utilized to screen small molecules with strong interactions with the non- ATP binding domains from a compound library, and four candidate compounds were finally targeted. Molecular dynamics simulations of the candidate molecules were performed to evaluate their drug potential.

Results: The four candidate compounds formed stable interactions with key residues of the SecA binding pocket. Molecular dynamics simulations further showed that the candidate molecules bound to the receptor in a stable conformation with nM-level inhibition constants, displaying potent SecA inhibitory activity. It lays the foundation of a lead compound for the development of antimicrobial drugs targeting SecA.

Conclusion: In this thesis, an inhibitor screening strategy based on non-ATP binding structural domains was successfully constructed, which breaks through the limitations of traditional methods to screen candidate molecules with high activity and low risk of potential side effects, and provides an innovative solution to meet the challenge of S. aureus drug resistance.

目的:金黄色葡萄球菌(S. aureus)已成为临床感染的致病菌之一,迫切需要开发新型抗S. aureus的药物。葡萄球菌的药物。SecA是细菌中一种保守的必需蛋白,被认为是理想的发育靶点。目前对SecA抑制剂的筛选主要集中在atp结合结构域,这增加了药物副作用的风险,因此本文选择了一种新的基于非atp结合结构域的筛选策略。方法:构建金黄色葡萄球菌SecA1N75的三维结构模型,利用分子对接技术从化合物库中筛选与非ATP结合域具有强相互作用的小分子,最终筛选出4个候选化合物。对候选分子进行分子动力学模拟以评估其药物潜力。结果:4个候选化合物与SecA结合袋的关键残基形成稳定的相互作用。分子动力学模拟进一步表明,候选分子以稳定的构象与受体结合,具有纳米级的抑制常数,显示出强大的SecA抑制活性。这为开发针对SecA的抗菌药物的先导化合物奠定了基础。结论:本论文成功构建了基于非atp结合结构域的抑制剂筛选策略,突破了传统方法筛选高活性、低潜在副作用风险候选分子的局限性,为应对金黄色葡萄球菌耐药挑战提供了创新解决方案。
{"title":"Screening of Novel Inhibitors Targeting the Non-ATP-binding Domain of <i>Staphylococcus aureus</i> SecA1.","authors":"Yan Liu, Qing Su, Zonglin Wang, Peiyao Liu, Jinjin Hong, Hyuk-Kyu Seoh, Xu Jia, Sen-Fang Sui, Phang-Cheng Tai, Xinhe Huang","doi":"10.2174/0115734064370398250426162503","DOIUrl":"https://doi.org/10.2174/0115734064370398250426162503","url":null,"abstract":"<p><strong>Objective: </strong><i>Staphylococcus aureus (S. aureus)</i> has been one of the pathogenic bacteria for clinical infections, and there is an urgent need for the development of novel anti-<i>S. aureus</i> drugs. SecA is a conserved and essential protein in bacteria and is considered as an ideal target for development. Current screening of inhibitors against SecA has focused on the ATP-binding structural domain, which increases the risk of drug side effects, so a novel screening strategy based on the non-ATP-binding structural domain was chosen in this paper.</p><p><strong>Methods: </strong>A three-dimensional structural model of <i>S. aureus</i> SecA1N75 was constructed, and molecular docking was utilized to screen small molecules with strong interactions with the non- ATP binding domains from a compound library, and four candidate compounds were finally targeted. Molecular dynamics simulations of the candidate molecules were performed to evaluate their drug potential.</p><p><strong>Results: </strong>The four candidate compounds formed stable interactions with key residues of the SecA binding pocket. Molecular dynamics simulations further showed that the candidate molecules bound to the receptor in a stable conformation with nM-level inhibition constants, displaying potent SecA inhibitory activity. It lays the foundation of a lead compound for the development of antimicrobial drugs targeting SecA.</p><p><strong>Conclusion: </strong>In this thesis, an inhibitor screening strategy based on non-ATP binding structural domains was successfully constructed, which breaks through the limitations of traditional methods to screen candidate molecules with high activity and low risk of potential side effects, and provides an innovative solution to meet the challenge of <i>S. aureus</i> drug resistance.</p>","PeriodicalId":18382,"journal":{"name":"Medicinal Chemistry","volume":" ","pages":""},"PeriodicalIF":1.9,"publicationDate":"2025-05-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144016401","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Medicinal Chemistry
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