Pub Date : 2024-05-01DOI: 10.1016/j.micinf.2024.105333
Salique Hassan Shaham , Prince Joshi , H. Shabeer Ali , Kanchan Yadav , Anamika Sharma , Madhav Nilakanth Mugale , Renu Tripathi
Cerebral malaria (CM) induced by Plasmodium falciparum is a devastating neurological complication that may lead the patient to coma and death. This study aimed to protect Plasmodium-infected C57BL6 mice from CM by targeting the angiotensin II type 1 (AT1) receptor, which is considered the common connecting link between hypertension and CM. In CM, AT-1 mediates blood–brain barrier (BBB) damage through the overexpression of β-catenin. The AT-1-inhibiting drugs, such as irbesartan and losartan, were evaluated for the prevention of CM. The effectiveness of these drugs was determined by the down regulation of β-catenin, TCF, LEF, ICAM-1, and VCAM-1 in the drug-treated groups. The expression levels of VE-cadherin and vinculin, essential for the maintenance of BBB integrity, were found to be restored in the drug-treated groups. The pro-inflammatory cytokine levels were decreased, and the anti-inflammatory cytokine levels increased with the treatment. As a major highlight, the mean survival time of treated mice was found to be increased even in the absence of treatment with an anti-malarial agent. The combination of irbesartan or losartan with the anti-malarial agent α/β-arteether has contributed to an 80% cure rate, which is higher than the 60% cure rate observed with α/β-arteether alone treatment.
脑疟疾(CM)是一种破坏性神经并发症,可导致患者昏迷和死亡。本研究旨在通过靶向血管紧张素II 1型(AT1)受体,保护C57BL6小鼠免受脑疟疾的感染。在CM中,AT-1通过β-catenin的过度表达介导血脑屏障(BBB)损伤。研究评估了厄贝沙坦和洛沙坦等抑制 AT-1 的药物对预防 CM 的作用。这些药物的有效性通过药物治疗组中β-catenin、TCF、LEF、ICAM-1 和 VCAM-1 的下调来确定。在药物治疗组中,对维持 BBB 完整性至关重要的 VE 角连蛋白和 vinculin 的表达水平得到了恢复。随着治疗的进行,促炎细胞因子水平下降,而抗炎细胞因子水平上升。一大亮点是,即使在未使用抗疟疾药物的情况下,接受治疗的小鼠的平均存活时间也有所增加。厄贝沙坦或洛沙坦与抗疟药物α/β-arteether的联合治疗使治愈率达到80%,高于单独使用α/β-arteether治疗的60%治愈率。
{"title":"Role of angiotensin pathway and its target therapy to rescue from experimental cerebral malaria","authors":"Salique Hassan Shaham , Prince Joshi , H. Shabeer Ali , Kanchan Yadav , Anamika Sharma , Madhav Nilakanth Mugale , Renu Tripathi","doi":"10.1016/j.micinf.2024.105333","DOIUrl":"10.1016/j.micinf.2024.105333","url":null,"abstract":"<div><p>Cerebral malaria (CM) induced by <em>Plasmodium falciparum</em> is a devastating neurological complication that may lead the patient to coma and death. This study aimed to protect <em>Plasmodium</em>-infected C57BL6 mice from CM by targeting the angiotensin II type 1 (AT1) receptor, which is considered the common connecting link between hypertension and CM. In CM, AT-1 mediates blood–brain barrier (BBB) damage through the overexpression of β-catenin. The AT-1-inhibiting drugs, such as irbesartan and losartan, were evaluated for the prevention of CM. The effectiveness of these drugs was determined by the down regulation of β-catenin, TCF, LEF, ICAM-1, and VCAM-1 in the drug-treated groups. The expression levels of VE-cadherin and vinculin, essential for the maintenance of BBB integrity, were found to be restored in the drug-treated groups. The pro-inflammatory cytokine levels were decreased, and the anti-inflammatory cytokine levels increased with the treatment. As a major highlight, the mean survival time of treated mice was found to be increased even in the absence of treatment with an anti-malarial agent. The combination of irbesartan or losartan with the anti-malarial agent α/β-arteether has contributed to an 80% cure rate, which is higher than the 60% cure rate observed with α/β-arteether alone treatment.</p></div>","PeriodicalId":18497,"journal":{"name":"Microbes and Infection","volume":null,"pages":null},"PeriodicalIF":5.8,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140566649","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-01DOI: 10.1016/j.micinf.2024.105300
Nadja de Lima Santana , Lucas Neves de Farias , Tainã Lago , Thyago Leal-Calvo , Paulo Roberto Lima Machado , Léa Cristina Castellucci
Mycobacterium leprae infects skin and peripheral nerves causing a broad of clinical forms. MicroRNAs (miRNAs) control immune mechanisms such as apoptosis, autophagy as well as to target genes leading to abnormal proliferation, metastasis, and invasion of cells. Herein we evaluated miRNAs expression for leprosy phenotypes in biopsies obtained from patients with and without reactions. We also correlated those miRNAs with both, bacillary index (BI) and genes involved in the micobacteria elimination process. Our results show a significant increase in the miR-125a-3p expression in paucibacillary (PB) patients vs multibacillary (MB) subjects (p = 0.007) and vs reversal reactions (RR) (p = 0.005), respectively. Likewise, there was a higher expression of miR-125a-3p in patients with erythema nodosum leprosum (ENL) vs MB without reactions (p = 0.002). Furthermore, there was a positive correlation between miR-125a-3p, miR-146b-5p and miR-132-5p expression and BI in patients with RR and ENL. These miRNAS were also correlated with genes such as ATG12 (miR-125a-3p), TNFRSF10A (miR-146b-5p), PARK2, CFLAR and STX7 (miR-132-5p). All together we underpin a role for these miRNAs in leprosy pathogenesis, implicating mechanisms such as apoptosis and autophagy in skin. The miR-125a-3p might have a distinct role associated with PB phenotype and ENL in MB patients.
{"title":"MicroRNAs correlate with bacillary index and genes associated to cell death processes in leprosy","authors":"Nadja de Lima Santana , Lucas Neves de Farias , Tainã Lago , Thyago Leal-Calvo , Paulo Roberto Lima Machado , Léa Cristina Castellucci","doi":"10.1016/j.micinf.2024.105300","DOIUrl":"10.1016/j.micinf.2024.105300","url":null,"abstract":"<div><p><em>Mycobacterium leprae</em> infects skin and peripheral nerves causing a broad of clinical forms. MicroRNAs (miRNAs) control immune mechanisms such as apoptosis, autophagy as well as to target genes leading to abnormal proliferation, metastasis, and invasion of cells. Herein we evaluated miRNAs expression for leprosy phenotypes in biopsies obtained from patients with and without reactions. We also correlated those miRNAs with both, bacillary index (BI) and genes involved in the micobacteria elimination process. Our results show a significant increase in the miR-125a-3p expression in paucibacillary (PB) patients vs multibacillary (MB) subjects (p = 0.007) and vs reversal reactions (RR) (p = 0.005), respectively. Likewise, there was a higher expression of miR-125a-3p in patients with erythema nodosum leprosum (ENL) vs MB without reactions (p = 0.002). Furthermore, there was a positive correlation between miR-125a-3p, miR-146b-5p and miR-132-5p expression and BI in patients with RR and ENL. These miRNAS were also correlated with genes such as ATG12 (miR-125a-3p), TNFRSF10A (miR-146b-5p), PARK2, CFLAR and STX7 (miR-132-5p). All together we underpin a role for these miRNAs in leprosy pathogenesis, implicating mechanisms such as apoptosis and autophagy in skin. The miR-125a-3p might have a distinct role associated with PB phenotype and ENL in MB patients.</p></div>","PeriodicalId":18497,"journal":{"name":"Microbes and Infection","volume":null,"pages":null},"PeriodicalIF":5.8,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1286457924000200/pdfft?md5=6fbd0911f7e6bacfda60599a27cfcefb&pid=1-s2.0-S1286457924000200-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139464245","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
C–C motif chemokine ligand 2, a gene that codes for a protein involved in inflammation. Certain SNPs in the CCL2 gene have been studied for their potential associations with susceptibility to various diseases. These SNPs may affect the production and function of the CCL2 protein, which is involved in the recruitment of immune cells to the site of inflammation. Variations in CCL2 may influence the immune response to Mycobacterium leprae infection.
Objective
To investigate the association of the C–C motif chemokine ligand-2 single nucleotide polymorphisms with leprosy.
Methods
CCL2 single nucleotide polymorphisms were analyzed in a total of 975 leprosy patients and 357 healthy controls. Of those, 577 leprosy and 288 healthy controls were analyzed by PCR-RFLP for CCL2 -2518 A>G, 535 leprosy and 290 controls for CCL2 -362 G>C, 295 leprosy and 240 controls for CCL2 -2134 T>G, 325 leprosy and 288 controls for CCL2 -1549 A>T SNPs by melting curve analysis using hybridization probe chemistry and detection by fluorescence resonance energy transfer (FRET) technique in Realtime PCR. The levels of CCL2, IL-12p70, IFN-γ, TNF-α, and TGF-β were estimated in sera samples and correlated with CCL2 genotypes.
Results
The frequency of the GCT (-2518 A>G, -362 G>C, -2134 T>G) haplotype is observed to be higher in leprosy patients compared to healthy controls (P = 0.04). There was no significant difference observed in genotypic frequencies between leprosy patients and healthy controls {(-2518A>G, p = 0.53), (-362 G>C, p = 0.01), (-2134 T>G, p = 0.10)}. G allele at the -2134 site is predominant in leprosy (borderline) without any reaction (8 %) compared to borderline patients with RR reactions (2.1 %) (P = 0.03). GG genotype (p = 0.008) and G allele at -2518 (p = 0.030) of the CCL 2 gene were found to be associated with patients with ENL reaction. An elevated level of serum CCL2 was observed in leprosy patients with the -2518 AA and AG genotypes (p = 0.0001).
Conclusions
G allele and GG genotype at the CCL2 -2518 site are associated with a risk of ENL reactions.
{"title":"Association of CC-chemokine ligand-2 gene polymorphisms with leprosy reactions","authors":"Sanjay Kumar Biswas , Keshar Kunja Mohanty , Vandana Singh , Mohan Natrajan , Mamta Arora , Joy Kumar Chakma , Srikanth Prasad Tripathy","doi":"10.1016/j.micinf.2024.105298","DOIUrl":"10.1016/j.micinf.2024.105298","url":null,"abstract":"<div><h3>Background</h3><p><em>C–C motif chemokine ligand 2</em>, a gene that codes for a protein involved in inflammation. Certain SNPs in the <em>CCL2</em> gene have been studied for their potential associations with susceptibility to various diseases. These SNPs may affect the production and function of the CCL2 protein, which is involved in the recruitment of immune cells to the site of inflammation. Variations in <em>CCL2</em> may influence the immune response to <em>Mycobacterium leprae</em> infection.</p></div><div><h3>Objective</h3><p>To investigate the association of the <em>C–C motif chemokine ligand-2</em> single nucleotide polymorphisms with leprosy.</p></div><div><h3>Methods</h3><p><em>CCL2</em> single nucleotide polymorphisms were analyzed in a total of 975 leprosy patients and 357 healthy controls. Of those, 577 leprosy and 288 healthy controls were analyzed by PCR-RFLP for <em>CCL2</em> -<em>2518 A</em><em>></em><em>G</em>, 535 leprosy and 290 controls for <em>CCL2</em> -362 G>C, 295 leprosy and 240 controls for <em>CCL2 -2134 T</em><em>></em><em>G</em>, 325 leprosy and 288 controls for <em>CCL2 -</em><em>1549 A</em><em>></em><em>T</em> SNPs by melting curve analysis using hybridization probe chemistry and detection by fluorescence resonance energy transfer (FRET) technique in Realtime PCR. The levels of CCL2, IL-12p70, IFN-γ, TNF-α, and TGF-β were estimated in sera samples and correlated with <em>CCL2</em> genotypes.</p></div><div><h3>Results</h3><p>The frequency of the <em>GCT</em> (-<em>2518</em> A>G, -<em>362 G</em><em>></em><em>C</em>, -<em>2134 T</em><em>></em><em>G</em>) haplotype is observed to be higher in leprosy patients compared to healthy controls (P = 0.04). There was no significant difference observed in genotypic frequencies between leprosy patients and healthy controls {(-<em>2518</em> <em>A</em><em>></em><em>G</em>, p = 0.53), (-<em>362 G</em><em>></em><em>C</em>, p = 0.01), (-<em>2134 T</em><em>></em><em>G</em>, p = 0.10)}. <em>G</em> allele at the -2134 site is predominant in leprosy (borderline) without any reaction (8 %) compared to borderline patients with RR reactions (2.1 %) (P = 0.03). <em>GG</em> genotype (p = 0.008) and <em>G</em> allele at -2518 (p = 0.030) of the <em>CCL 2</em> gene were found to be associated with patients with ENL reaction. An elevated level of serum CCL2 was observed in leprosy patients with the -<em>2518 AA</em> and <em>AG</em> genotypes (p = 0.0001).</p></div><div><h3>Conclusions</h3><p><em>G</em> allele and <em>GG</em> genotype at the <em>CCL2 -2518</em> site are associated with a risk of ENL reactions.</p></div>","PeriodicalId":18497,"journal":{"name":"Microbes and Infection","volume":null,"pages":null},"PeriodicalIF":5.8,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1286457924000182/pdfft?md5=96915f27ceedf76558a50ea6970c498c&pid=1-s2.0-S1286457924000182-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139500889","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Global burden of infectious diseases and antimicrobial resistance are major public health issues calling for innovative control measures. Bacterial NAD kinase (NADK) is a crucial enzyme for production of NADP(H) and growth. In Staphylococcus aureus, NADK promotes pathogenesis by supporting production of key virulence determinants. Here, we find that knockdown of NADK by CRISPR interference sensitizes S. aureus to osmotic stress and to stresses induced by antibiotics targeting the envelop as well as replication, transcription and translation. Thus, NADK represents a promising target for the development of inhibitors which could be used in combination with current antibiotics.
全球传染病负担和抗菌药耐药性是重大的公共卫生问题,需要采取创新的控制措施。细菌 NAD 激酶(NADK)是产生 NADP(H)和生长的关键酶。在金黄色葡萄球菌中,NADK 通过支持关键毒力决定因子的产生来促进致病机理。在这里,我们发现通过 CRISPR 干扰敲除 NADK 会使金黄色葡萄球菌对渗透压和针对包膜以及复制、转录和翻译的抗生素诱导的压力敏感。因此,NADK是开发抑制剂的一个有希望的靶点,可与现有抗生素联合使用。
{"title":"Staphylococcus aureus NAD kinase is required for envelop and antibiotic stress responses","authors":"Clarisse Leseigneur , Lou Mondange , Javier Pizarro-Cerdá , Olivier Dussurget","doi":"10.1016/j.micinf.2024.105334","DOIUrl":"10.1016/j.micinf.2024.105334","url":null,"abstract":"<div><p>Global burden of infectious diseases and antimicrobial resistance are major public health issues calling for innovative control measures. Bacterial NAD kinase (NADK) is a crucial enzyme for production of NADP(H) and growth. In <em>Staphylococcus aureus</em>, NADK promotes pathogenesis by supporting production of key virulence determinants. Here, we find that knockdown of NADK by CRISPR interference sensitizes <em>S. aureus</em> to osmotic stress and to stresses induced by antibiotics targeting the envelop as well as replication, transcription and translation. Thus, NADK represents a promising target for the development of inhibitors which could be used in combination with current antibiotics.</p></div>","PeriodicalId":18497,"journal":{"name":"Microbes and Infection","volume":null,"pages":null},"PeriodicalIF":5.8,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1286457924000649/pdfft?md5=3fdb489c47a431eb7cdb27b2783f5aea&pid=1-s2.0-S1286457924000649-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140331812","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-01DOI: 10.1016/j.micinf.2024.105317
Jackson Teh , Kristi Biswas , Sharon Waldvogel-Thurlow , David Broderick , Sita Tarini Clark , James Johnston , Brett Wagner Mackenzie , Richard Douglas
The discovery of bacterial microcolonies in tonsillar tissue of patients with tonsillar hyperplasia has raised the question of their role in provoking the local immune response. Tonsils collected from patients undergoing tonsillectomy were stained for three clinically relevant bacterial taxa and lymphocytes. The bacterial composition and abundance of microcolonies was investigated using a combination of laser-microdissection, amplicon sequencing and Droplet Digital polymerase chain reaction. Microcolonies were detected in most samples (32/35) with a high prevalence of Haemophilus influenzae (78% of samples). B and T cell lymphocytes were significantly higher in the epithelium adjacent to microcolonies compared to epithelium distal to microcolonies. Furthermore, significant positive and negative correlations were identified between bacterial taxa and lymphocytes. Genus Streptococcus, which includes Group A Streptococcus (traditionally described as the main pathogen of tonsillar hyperplasia), was found in low abundance in this study. These results suggest other potential pathogens may be involved in stimulating the local immune response leading to tonsillar hyperplasia.
在扁桃体增生患者的扁桃体组织中发现细菌微菌落后,人们对细菌微菌落在引起局部免疫反应中的作用产生了疑问。对扁桃体切除术患者的扁桃体进行染色,检测三种临床相关的细菌类群和淋巴细胞。采用激光微切片、扩增子测序和液滴数字 PCR 聚合酶链反应相结合的方法,对微菌落的细菌组成和丰度进行了研究。大多数样本(32/35)中都检测到了微菌落,其流行率很高(78% 的样本)。与微菌落远端上皮细胞相比,微菌落邻近上皮细胞中的 B 和 T 细胞淋巴细胞明显较多。此外,还发现细菌类群与淋巴细胞之间存在明显的正负相关。在本研究中,包括 A 组(传统上被描述为扁桃体增生的主要病原体)在内的 A 组细菌的数量较少。这些结果表明,其他潜在病原体也可能参与刺激导致扁桃体增生的局部免疫反应。
{"title":"Paired qualitative and quantitative analysis of bacterial microcolonies in the tonsils of patients with tonsillar hyperplasia","authors":"Jackson Teh , Kristi Biswas , Sharon Waldvogel-Thurlow , David Broderick , Sita Tarini Clark , James Johnston , Brett Wagner Mackenzie , Richard Douglas","doi":"10.1016/j.micinf.2024.105317","DOIUrl":"10.1016/j.micinf.2024.105317","url":null,"abstract":"<div><p>The discovery of bacterial microcolonies in tonsillar tissue of patients with tonsillar hyperplasia has raised the question of their role in provoking the local immune response. Tonsils collected from patients undergoing tonsillectomy were stained for three clinically relevant bacterial taxa and lymphocytes. The bacterial composition and abundance of microcolonies was investigated using a combination of laser-microdissection, amplicon sequencing and Droplet Digital polymerase chain reaction. Microcolonies were detected in most samples (32/35) with a high prevalence of <em>Haemophilus influenzae</em> (78% of samples). B and T cell lymphocytes were significantly higher in the epithelium adjacent to microcolonies compared to epithelium distal to microcolonies. Furthermore, significant positive and negative correlations were identified between bacterial taxa and lymphocytes. Genus <em>Streptococcus</em>, which includes Group A <em>Streptococcus</em> (traditionally described as the main pathogen of tonsillar hyperplasia), was found in low abundance in this study. These results suggest other potential pathogens may be involved in stimulating the local immune response leading to tonsillar hyperplasia.</p></div>","PeriodicalId":18497,"journal":{"name":"Microbes and Infection","volume":null,"pages":null},"PeriodicalIF":5.8,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1286457924000376/pdfft?md5=f1a1103eb909b322e37c3e73d93b22ba&pid=1-s2.0-S1286457924000376-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140055988","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-01DOI: 10.1016/j.micinf.2024.105332
Gang Sheng , Hongqian Chu , Huijuan Duan , Hong Sun , Zhongyao Xie , Zhaogang Sun , Tingming Cao
Background
Little knowledge of antigen existence in the pulmonary tuberculosis (PTB) patient serum impeded its development in antigen detection technology, despite its considerable potential.
Methods
Human ligand proteins and their adsorbent Mycobacterium tuberculosis (M.tb) proteins in the serum of PTB patients were identified using human protein chip (HuProt™) and LC-MS/MS, successively. The monoclonal antibody of ligand proteins, C5orf24, and polyclonal antibody of 9 M.tb proteins were prepared on mice and rabbits which were used to develop a novel enzyme-linked ligand-sorbent assay (ELLSA). The 412 volunteers were divided into the PTB group (n = 250) and the healthy control (n = 162). The PTB group was further divided into ATB (n = 131), LTBI (n = 18), Clinical diagnosis (n = 18), and Suspected (n = 73). All samples were tested by ELLSA to evaluate the diagnostic performance of ELLSA in PTB patients.
Results
Nine ligand proteins specific to PTB patients were identified on chips, with Chromosome 5 Open Reading Frame 24 (C5orf24) and kinocilin (KNCN) showing significantly higher signals. Proteomic analysis of the C5orf24-and KNCN-adsorbent protein complexes revealed 10 and 10 of the M.tb proteins, respectively. According to the composition reference of standard, the ELLSA based on C5orf24 ligand demonstrated a higher sensitivity of 69.6% and specificity of 90.18% in ATB patients and had a sensitivity of 64.22% in bacterial negative pulmonary tuberculosis, whereas the sensitivity of MGIT 960 and Xpert M.tb/RIF were 0%, respectively.
Conclusions
M.tb proteins in serum can be enriched by ligand proteins and detected by ELLSA which proved to have excellent diagnostic performance for PTB.
{"title":"A novel enzyme-linked ligand-sorbent assay (ELLSA) to screening pulmonary tuberculosis: a retrospective cross-sectional study","authors":"Gang Sheng , Hongqian Chu , Huijuan Duan , Hong Sun , Zhongyao Xie , Zhaogang Sun , Tingming Cao","doi":"10.1016/j.micinf.2024.105332","DOIUrl":"10.1016/j.micinf.2024.105332","url":null,"abstract":"<div><h3>Background</h3><p>Little knowledge of antigen existence in the pulmonary tuberculosis (PTB) patient serum impeded its development in antigen detection technology, despite its considerable potential.</p></div><div><h3>Methods</h3><p>Human ligand proteins and their adsorbent <em>Mycobacterium tuberculosis</em> (<em>M.tb</em>) proteins in the serum of PTB patients were identified using human protein chip (HuProt™) and LC-MS/MS, successively. The monoclonal antibody of ligand proteins, C5orf24, and polyclonal antibody of 9 M.tb proteins were prepared on mice and rabbits which were used to develop a novel enzyme-linked ligand-sorbent assay (ELLSA). The 412 volunteers were divided into the PTB group (n = 250) and the healthy control (n = 162). The PTB group was further divided into ATB (n = 131), LTBI (n = 18), Clinical diagnosis (n = 18), and Suspected (n = 73). All samples were tested by ELLSA to evaluate the diagnostic performance of ELLSA in PTB patients.</p></div><div><h3>Results</h3><p>Nine ligand proteins specific to PTB patients were identified on chips, with Chromosome 5 Open Reading Frame 24 (C5orf24) and kinocilin (KNCN) showing significantly higher signals. Proteomic analysis of the C5orf24-and KNCN-adsorbent protein complexes revealed 10 and 10 of the <em>M.tb</em> proteins, respectively. According to the composition reference of standard, the ELLSA based on C5orf24 ligand demonstrated a higher sensitivity of 69.6% and specificity of 90.18% in ATB patients and had a sensitivity of 64.22% in bacterial negative pulmonary tuberculosis, whereas the sensitivity of MGIT 960 and Xpert <em>M.tb</em>/RIF were 0%, respectively.</p></div><div><h3>Conclusions</h3><p><em>M.tb</em> proteins in serum can be enriched by ligand proteins and detected by ELLSA which proved to have excellent diagnostic performance for PTB.</p></div>","PeriodicalId":18497,"journal":{"name":"Microbes and Infection","volume":null,"pages":null},"PeriodicalIF":5.8,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140306125","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-01DOI: 10.1016/j.micinf.2024.105303
Pavlína Šimečková , Josef Slavík , Andrea Fořtová , Ivana Huvarová , Lucie Králiková , Michal Stefanik , Pavel Svoboda , Daniel Ruzek , Miroslav Machala
The life cycle of enveloped viruses is closely linked to host-cell lipids. However, changes in lipid metabolism during infections with the tick-borne encephalitis virus (TBEV) have not been described. TBEV is a medically important orthoflavivirus, which is endemic to many parts of Europe and Asia. In the present study, we performed targeted lipidomics with HPLC-MS/MS to evaluate changes in phospholipid and sphingolipid concentrations in TBEV-infected human neuronal SK-N-SH cells. TBEV infections significantly increased phosphatidylcholine, phosphatidylinositol, and phosphatidylserine levels within 48 h post-infection (hpi). Sphingolipids were slightly increased in dihydroceramides within 24 hpi. Later, at 48 hpi, the contents of sphinganine, dihydroceramides, ceramides, glucosylceramides, and ganglioside GD3 were elevated. On the other hand, sphingosine-1-phosphate content was slightly reduced in TBEV-infected cells. Changes in sphingolipid concentrations were accompanied by suppressed expression of a majority of the genes linked to sphingolipid and glycosphingolipid metabolism. Furthermore, we found that a pharmacological inhibitor of sphingolipid synthesis, fenretinide (4-HPR), inhibited TBEV infections in SK-N-SH cells. Taken together, our results suggested that both structural and signaling functions of lipids could be affected during TBEV infections. These changes might be connected to virus propagation and/or host-cell defense.
{"title":"Tick-borne encephalitis virus modulates sphingolipid and phospholipid metabolism in infected human neuronal cells","authors":"Pavlína Šimečková , Josef Slavík , Andrea Fořtová , Ivana Huvarová , Lucie Králiková , Michal Stefanik , Pavel Svoboda , Daniel Ruzek , Miroslav Machala","doi":"10.1016/j.micinf.2024.105303","DOIUrl":"10.1016/j.micinf.2024.105303","url":null,"abstract":"<div><p>The life cycle of enveloped viruses is closely linked to host-cell lipids. However, changes in lipid metabolism during infections with the tick-borne encephalitis virus (TBEV) have not been described. TBEV is a medically important orthoflavivirus, which is endemic to many parts of Europe and Asia. In the present study, we performed targeted lipidomics with HPLC-MS/MS to evaluate changes in phospholipid and sphingolipid concentrations in TBEV-infected human neuronal SK-N-SH cells. TBEV infections significantly increased phosphatidylcholine, phosphatidylinositol, and phosphatidylserine levels within 48 h post-infection (hpi). Sphingolipids were slightly increased in dihydroceramides within 24 hpi. Later, at 48 hpi, the contents of sphinganine, dihydroceramides, ceramides, glucosylceramides, and ganglioside GD3 were elevated. On the other hand, sphingosine-1-phosphate content was slightly reduced in TBEV-infected cells. Changes in sphingolipid concentrations were accompanied by suppressed expression of a majority of the genes linked to sphingolipid and glycosphingolipid metabolism. Furthermore, we found that a pharmacological inhibitor of sphingolipid synthesis, fenretinide (4-HPR), inhibited TBEV infections in SK-N-SH cells. Taken together, our results suggested that both structural and signaling functions of lipids could be affected during TBEV infections. These changes might be connected to virus propagation and/or host-cell defense.</p></div>","PeriodicalId":18497,"journal":{"name":"Microbes and Infection","volume":null,"pages":null},"PeriodicalIF":5.8,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1286457924000236/pdfft?md5=989348ba9672cb53a53f257f5cb431e3&pid=1-s2.0-S1286457924000236-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139564422","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-01DOI: 10.1016/j.micinf.2024.105368
Qi Wang, Xiaomeng Tang, W. Qiao, Lina Sun, Han Shi, Dexi Chen, Bin Xu, Yanmin Liu, Juan Zhao, Chunyang Huang, Ronghua Jin
{"title":"Machine learning-based characterization of the gut microbiome associated with the progression of Primary biliary cholangitis to cirrhosis","authors":"Qi Wang, Xiaomeng Tang, W. Qiao, Lina Sun, Han Shi, Dexi Chen, Bin Xu, Yanmin Liu, Juan Zhao, Chunyang Huang, Ronghua Jin","doi":"10.1016/j.micinf.2024.105368","DOIUrl":"https://doi.org/10.1016/j.micinf.2024.105368","url":null,"abstract":"","PeriodicalId":18497,"journal":{"name":"Microbes and Infection","volume":null,"pages":null},"PeriodicalIF":5.8,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141137069","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-01DOI: 10.1016/j.micinf.2024.105302
Jiayu Liu , Yue Li , Yuhan Liu , Renlin Yu , Yibing Yin , Xiaofei Lai , Banglao Xu , Ju Cao
Candidemia is a severe disease with high mortality in both intensive care unit (ICU) and non-ICU settings. Considering that progranulin (PGRN) is a potential therapeutic target for the candidemia caused by Candida albicans, we determined the serum level of PGRN after candidemia and evaluated its association with mortality. A retrospective discovery cohort (62 patients) and a validation cohort (70 patients) were enrolled. Blood was collected on day of first blood culture positivity for C. albicans, and serum PGRN levels were then measured. In the discovery cohort, all serum PGRN studied were expressed at higher levels in candidemia patients than in bacteremia patients and healthy volunteers, non-survivors presented with significantly higher serum PGRN concentrations when compared with survivors. Serum PGRN concentration was associated with 30-day mortality and patients at a higher risk of death showed higher serum PGRN levels. These results were confirmed in the independent validation cohort. Interestingly, in vitro study demonstrated that macrophages, neutrophils and lymphocytes may be the major source of PGRN production after C. albicans infection instead of epithelial cells. Our findings highlight that serum PGRN appears as a biomarker in candidemia patients and as a promising tool for mortality risk stratification in managing candidemia.
{"title":"Elevated serum level of progranulin is associated with increased mortality in critically ill patients with candidemia","authors":"Jiayu Liu , Yue Li , Yuhan Liu , Renlin Yu , Yibing Yin , Xiaofei Lai , Banglao Xu , Ju Cao","doi":"10.1016/j.micinf.2024.105302","DOIUrl":"10.1016/j.micinf.2024.105302","url":null,"abstract":"<div><p><span><span>Candidemia is a severe disease with high mortality in both </span>intensive care unit<span> (ICU) and non-ICU settings. Considering that progranulin (PGRN) is a potential therapeutic target for the candidemia caused by </span></span><span><em>Candida albicans</em></span><span>, we determined the serum level of PGRN after candidemia and evaluated its association with mortality. A retrospective discovery cohort (62 patients) and a validation cohort (70 patients) were enrolled. Blood was collected on day of first blood culture positivity for </span><em>C. albicans</em><span><span>, and serum PGRN levels were then measured. In the discovery cohort, all serum PGRN studied were expressed at higher levels in candidemia patients than in bacteremia patients and </span>healthy volunteers<span>, non-survivors presented with significantly higher serum PGRN concentrations when compared with survivors. Serum PGRN concentration was associated with 30-day mortality and patients at a higher risk of death showed higher serum PGRN levels. These results were confirmed in the independent validation cohort. Interestingly, in vitro study demonstrated that macrophages, neutrophils and lymphocytes may be the major source of PGRN production after </span></span><em>C. albicans</em><span> infection instead of epithelial cells. Our findings highlight that serum PGRN appears as a biomarker in candidemia patients and as a promising tool for mortality risk stratification in managing candidemia.</span></p></div>","PeriodicalId":18497,"journal":{"name":"Microbes and Infection","volume":null,"pages":null},"PeriodicalIF":5.8,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139512875","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-01DOI: 10.1016/j.micinf.2024.105316
Qin Ye , Yaqiong Zhao , Jie Zhao , Zeyue Ouyang , Yao Feng , Jing Hu , Xiaolin Su , Ningxin Chen , Yun Chen , Li Tan , Yunzhi Feng , Yue Guo
Objects
As periodontitis progresses, the oral microbiome changes dynamically. The aim of this study is to evaluate the dominant bacteria of adults with stage III periodontitis and investigate potential pathways related to the dominant bacteria.
Materials and methods
16S rRNA sequencing was carried out to detect the differences in the oral microbiome between adult with stage Ⅰ and stage Ⅲ periodontitis and find the dominant bacteria in each group. The inhibitor of the predominant pathway for stage Ⅲ periodontitis was used to investigate the role of the dominant bacteria in periodontitis in vivo and in vitro.
Results
There was no significant difference in the α-diversity between the two groups. The results of β-diversity showed that the samples were divided into different groups according to the stage of periodontitis. The dominant bacteria in youths with stage Ⅲ periodontitis was Prevotella and may be related to the arachidonic acid metabolism pathway. Administration of SKF-86002 suppressed the expression of inflammation mediators in vivo and vitro.
Conclusions
Prevotella was the one dominant bacteria in young people with stage Ⅲ periodontitis and was related to the arachidonic acid metabolism pathway.
{"title":"Prevotella, a dominant bacterium in young people with stage Ⅲ periodontitis, related to the arachidonic acid metabolism pathway","authors":"Qin Ye , Yaqiong Zhao , Jie Zhao , Zeyue Ouyang , Yao Feng , Jing Hu , Xiaolin Su , Ningxin Chen , Yun Chen , Li Tan , Yunzhi Feng , Yue Guo","doi":"10.1016/j.micinf.2024.105316","DOIUrl":"10.1016/j.micinf.2024.105316","url":null,"abstract":"<div><h3>Objects</h3><p>As periodontitis progresses, the oral microbiome changes dynamically. The aim of this study is to evaluate the dominant bacteria of adults with stage III periodontitis and investigate potential pathways related to the dominant bacteria.</p></div><div><h3>Materials and methods</h3><p>16S rRNA sequencing was carried out to detect the differences in the oral microbiome between adult with stage Ⅰ and stage Ⅲ periodontitis and find the dominant bacteria in each group. The inhibitor of the predominant pathway for stage Ⅲ periodontitis was used to investigate the role of the dominant bacteria in periodontitis <em>in vivo</em> and <em>in vitro</em>.</p></div><div><h3>Results</h3><p>There was no significant difference in the α-diversity between the two groups. The results of β-diversity showed that the samples were divided into different groups according to the stage of periodontitis. The dominant bacteria in youths with stage Ⅲ periodontitis was <em>Prevotella</em> and may be related to the arachidonic acid metabolism pathway. Administration of SKF-86002 suppressed the expression of inflammation mediators in <em>vivo</em> and <em>vitro.</em></p></div><div><h3>Conclusions</h3><p><em>Prevotella</em> was the one dominant bacteria in young people with stage Ⅲ periodontitis and was related to the arachidonic acid metabolism pathway.</p></div>","PeriodicalId":18497,"journal":{"name":"Microbes and Infection","volume":null,"pages":null},"PeriodicalIF":5.8,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139996785","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}