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Fetal development of the urinary tract of Cuniculus paca 阉鼠尿道的胎儿发育。
IF 2 3区 工程技术 Q2 ANATOMY & MORPHOLOGY Pub Date : 2024-06-27 DOI: 10.1002/jemt.24641
Diego Ferreira de Sousa, Frederico Ozanan Barros Monteiro, Pedro Mayor, Elane Guerreiro Giese, Érika Branco, Ana Rita de Lima

The species Cuniculus paca is highly subject to predation, whether natural or anthropogenic, and the ability of species to withstand different levels of depredation depends directly on their reproductive dynamics. However, there is little literature on the developmental biology of this species, and so the aim of this paper was to describe the fetal development of the urinary tract of C. paca through morphological analysis. Twelve specimens with estimated gestational ages of between 75 and 157 days were used, divided into 3 groups. We found the urinary tract in pelvic-abdominal topography with macroscopic differentiation between the organs already present in the first ages studied; in addition, the microscopic structural pattern changed little between the groups. This evidence reinforces the precocial development of these individuals.

Research Highlights

With the results obtained for development of urinary tract in Cuniculus paca reinforces the precocial development of these individuals. The urinary tract had pelvic-abdominal topography with macroscopic differentiation between the organs already present in the first ages studied. The microscopic structural pattern changed little between the groups. At all analyzed fetal ages, the cortical region of kidney was characterized by the presence of glomeruli arranged throughout the region, formed by capillary plexuses surrounded by a glomerular capsule. In addition, the cortical region also presented convoluted tubules with cubic epithelial tissue cells and a brush border. The presence of a developed macula densa was observed next to the glomeruli, suggesting the initial formation of the fetal juxtaglomerular apparatus.

Cuniculus paca物种深受自然或人为捕食的影响,而物种抵御不同程度捕食的能力直接取决于其繁殖动态。然而,有关该物种发育生物学的文献很少,因此本文旨在通过形态学分析描述 C. paca 尿道的胎儿发育过程。我们使用了 12 个估计胎龄在 75 天到 157 天之间的标本,将其分为 3 组。我们发现,泌尿道在盆腹腔地形图上的器官之间的宏观分化在研究的前几个年龄段就已经存在;此外,各组之间的微观结构模式变化不大。这些证据进一步证实了这些个体的社会前发育。研究亮点:对阉鼠尿道发育的研究结果加强了这些个体的社会前发育。泌尿道具有骨盆-腹部地形图,各器官之间的宏观分化在研究的最初年龄段就已经存在。各组之间的微观结构模式变化不大。在所有分析的胎龄中,肾皮质区的特点是肾小球遍布整个区域,由肾小球囊包围的毛细血管丛形成。此外,肾皮质区还出现了具有立方上皮组织细胞和刷状缘的曲小管。在肾小球旁观察到发达的黄斑,这表明胎儿的并肾小球装置已经初步形成。
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引用次数: 0
Morphology and composition of calcium oxalate monohydrate phytoliths in the bark of Betula ermanii (stone birch): Case study from Sakhalin Island 石桦树树皮中一水草酸钙植金石的形态和组成:萨哈林岛案例研究。
IF 2 3区 工程技术 Q2 ANATOMY & MORPHOLOGY Pub Date : 2024-06-26 DOI: 10.1002/jemt.24636
Ella V. Sokol, Anna S. Deviatiiarova, Anna V. Kopanina, Kseniya A. Filippova, Inna I. Vlasova

The morphology of calcium oxalate monohydrate precipitates (COM, Ca(C2O4)·H2O, P21/c, whewellite) occurring as crystals or intergrowths, as well as distribution of crystal-bearing idioblasts, have been studied for the first time in the bark of stone birch Betula ermanii from Sakhalin Island sampled in an area affected by mud volcanism and an unaffected typical forest environment taken for reference. The study addresses several issues (i) number and size of phytoliths and their distribution in different cell types; (ii) density of calcification in specific cells; (iii) habits of single crystals, twins, and complex intergrowths, as well as frequency of different morphologies and their relations. The trends of time-dependent morphological changes in separately analyzed crystals and intergrowths record the evolution of COM morphology from nuclei to mature grains. Of special interest are the nucleation sites and features of organic and inorganic seeds and nuclei for COM phytoliths. The precipitation process and crystal habits are mainly controlled by supersaturation, and it is thus important to constrain the Ca distribution patterns in different bark tissues. The B. ermanii samples were analyzed by several methods: scanning electron microscopy (SEM) for the distribution patterns and micromorphology of COM precipitates and bulk Ca content in bark; electron probe microanalysis (EPMA) for the mineral chemistry of COM precipitates; inductively coupled plasma optical emission spectrometry (ICP-OES) and inductively coupled plasma mass spectrometry (ICP-MS) for trace elements in bulk bark and wood.

Research Highlights

  • The distribution and morphology of whewellite precipitates in the analyzed B. ermanii bark samples indicate that the aqueous solution was most strongly supersaturated with respect to the Ca(C2O4)·H2O solid phase at the parenchyma-sclerenchyma boundary, where most of the COM spherulites are localized and often coexist with large single crystals and contact COM twins.
我们首次研究了萨哈林岛石桦树(Betula ermanii)树皮中草酸钙一水沉淀物(COM,Ca(C2O4)-H2O,P21/c,麦饭石)的形态,这些沉淀物以晶体或互生体形式出现,同时还研究了含晶体的单细胞的分布情况,取样地为受泥火山影响的地区和未受影响的典型森林环境。该研究涉及几个问题:(i) 植物钙片的数量和大小及其在不同细胞类型中的分布;(ii) 特定细胞中的钙化密度;(iii) 单晶体、孪晶体和复杂互生体的习性,以及不同形态的频率及其关系。在单独分析的晶体和互生体中,与时间相关的形态变化趋势记录了 COM 形态从晶核到成熟晶粒的演变过程。特别值得关注的是有机和无机种子的成核部位和特征以及 COM 植物石核。沉淀过程和晶体习性主要受过饱和控制,因此,确定不同树皮组织中钙的分布模式非常重要。对 B. ermanii 样品采用了多种方法进行分析:扫描电子显微镜(SEM)分析 COM 沉淀物的分布模式和微观形态以及树皮中的大量 Ca 含量;电子探针显微分析(EPMA)分析 COM 沉淀物的矿物化学性质;电感耦合等离子体光发射光谱分析(ICP-OES)和电感耦合等离子体质谱分析(ICP-MS)分析树皮和木材中的痕量元素。研究重点:所分析的 B. ermanii 树皮样本中的麦饭石沉淀物的分布和形态表明,水溶液相对于实质层-小叶层边界处的 Ca(C2O4)-H2O 固相而言,过饱和程度最高,大部分 COM 球晶都集中在该处,并且经常与大单晶和接触式 COM 双晶共存。
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引用次数: 0
Revisiting calculation of tilt angles for double-tilt sample holders in transmission electron microscopes 重新审视透射电子显微镜双倾斜样品架的倾斜角计算。
IF 2 3区 工程技术 Q2 ANATOMY & MORPHOLOGY Pub Date : 2024-06-26 DOI: 10.1002/jemt.24640
Xing-Zhong Li

We revisited the formula related to the overall tilt angle of a specimen using a side-entry double-tilt sample holder in a transmission electron microscope. Initially, we examined existing formulas in the literature for calculating the overall tilt angle. Subsequently, a new formula was derived, proven to better account for the actions of the double-tilt holder, thereby providing improved accuracy in the calculation. This newly derived formula has been implemented in the Landyne software suite. Furthermore, we demonstrated the accuracy of the new formula through examples.

Research Highlights

A new formula has been derived to calculate overall tilt angles for side-entry double-tilt holders in TEM.

我们重新研究了透射电子显微镜中使用侧入式双倾斜样品架的试样整体倾斜角的相关公式。最初,我们研究了文献中现有的整体倾斜角计算公式。随后,我们推导出了一个新公式,该公式被证明能够更好地考虑双倾斜支架的作用,从而提高计算的准确性。这个新推导出的公式已在兰登软件套件中实施。此外,我们还通过实例证明了新公式的准确性。研究亮点:我们推导出了一个新公式,用于计算 TEM 中侧入式双倾角夹具的整体倾角。
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引用次数: 0
Seed morphology of 31 Euphorbia L. species (Euphorbiaceae) in Turkey and their taxonomic significance 土耳其 31 种大戟科植物(Euphorbia L. species)的种子形态及其分类意义。
IF 2 3区 工程技术 Q2 ANATOMY & MORPHOLOGY Pub Date : 2024-06-25 DOI: 10.1002/jemt.24637
Aysun Patterson, Mehmet Cengiz Karaismailoğlu, Orhan Küçüker

This paper includes a comprehensive taxonomical study based on seed morphology of 31 Euphorbia L species from Türkiye. The studied Euphorbia taxa have been examined for morphological traits such as seed color, dimensions, surface ornamentation, cell wall structures, lipid granule presence, and caruncle shape and dimensions with Scanning electron microscopy (SEM) and stereo microscopy to develop a better understanding of the basis of its species. The outcomes show that the species differ based on seed shape and color. The seed width dimensions are between 0.55 and 3.83 mm and the length dimensions are between 1.03 and 5.87 mm. Euphorbia lathyris, E. prostrata, and E. nutans are marked differently from the rest of the studied species based on their seed dimension. The seed surface ornamentation is classified into 12 different types: tuberculate, reticulate, areolate, colliculate, verrucate, alveolate, rugose, alveolate-reticulate, slightly reticulate, reticulate-areolate, pusticulate, and ruminate. The most common form is reticulate, found in eight species. The tuberculate (in E. helioscopia), areolate (in E. oblongata), slightly reticulate (in E. amygdaloides), and ruminate (in E. herniariifolia) ornamentation types are each characterized by only one species. The presence of lipid granules and anticlinal and periclinal cell walls disclose interspecific relationships within the examined taxa. Also, an identification key is offered for the studied species based on seed characters.

Research Highlights

  • The seeds of Turkish Euphorbia species have been studied in depth.
  • The morphological characters of seeds of Turkish Euphorbia species have been examined utilizing SEM and light microscopy for the first time and discussed the taxonomic practice of these characteristics.
  • A dichotomous key containing seed morphological data has presented.
本文根据图尔基耶的 31 种大戟科植物的种子形态进行了全面的分类研究。本文利用扫描电子显微镜(SEM)和立体显微镜对所研究的大戟科植物种子的形态特征进行了检查,如种子的颜色、尺寸、表面装饰、细胞壁结构、脂质颗粒的存在以及种阜的形状和尺寸,以便更好地了解其物种基础。结果表明,根据种子的形状和颜色,其种类有所不同。种子宽度在 0.55 至 3.83 毫米之间,长度在 1.03 至 5.87 毫米之间。根据种子尺寸,Euphorbia lathyris、E. prostrata 和 E. nutans 的标记与其他研究物种不同。种子表面的纹饰可分为 12 种不同类型:瘤状、网状、等距状、卷曲状、疣状、泡状、皱褶状、泡状-网状、略网状、网状-等距状、脓疱状和反刍状。最常见的形式是网状,见于 8 个物种。瘤状(在 E. helioscopia 中)、窠状(在 E. oblongata 中)、稍网状(在 E. amygdaloides 中)和反刍状(在 E. herniariifolia 中)的装饰类型各有特点,只有一种。脂质颗粒、反侧壁和周壁细胞壁的存在揭示了所研究类群的种间关系。此外,还根据种子特征为所研究的物种提供了一个识别关键。研究重点:对土耳其大戟科植物种子进行了深入研究。首次利用扫描电镜和光学显微镜检查了土耳其大戟科植物种子的形态特征,并讨论了这些特征的分类实践。研究还提出了包含种子形态数据的二分键。
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引用次数: 0
Structural characteristics and regenerative potential: Insights from the molly fish spinal cord 结构特征和再生潜力:莫利鱼脊髓的启示
IF 2 3区 工程技术 Q2 ANATOMY & MORPHOLOGY Pub Date : 2024-06-25 DOI: 10.1002/jemt.24633
Mahmoud Awad, Ramy K. A. Sayed, Dalia Mohammadin, Marwa M. Hussein, Doaa M. Mokhtar

Unlike mammals, species such as fish and amphibians can regenerate damaged spinal cords, offering insights into potential therapeutic targets. This study investigates the structural features of the molly fish spinal cord through light and electron microscopy. The most notable characteristic was the presence of Mauthner cells (M-cells), which exhibited large cell bodies and processes, as well as synaptic connections with astrocytes. These astrocytic connections contained synaptic vesicles, suggesting electrical transmission at the M-cell endings. Astrocytes, which were labeled with glial fibrillary acidic protein (GFAP), contained cytoplasmic glycogen granules, potentially serving as an emergency fuel source. Two types of oligodendrocytes were identified: a small, dark cell and a larger, lighter cell, both of which reacted strongly with oligodendrocyte transcription factor 2 (Olig2). The dark oligodendrocyte resembled human oligodendrocyte precursors, while the light oligodendrocyte was similar to mature human oligodendrocytes. Additionally, proliferative neurons in the substantia grisea centralis expressed myostatin, Nrf2, and Sox9. Collectively, these findings suggest that the molly fish spinal cord has advanced structural features conducive to spinal cord regeneration and could serve as an excellent model for studying central nervous system regeneration. Further studies on the functional aspects of the molly fish spinal cord are recommended.

Research Highlights

  • Mauthner cells (M-cell), with their typical large cell body and processes, were the most characteristic feature in Molly fish spinal cord, where it presented synaptic connections with astrocytes and their ends contained synaptic vesicles indicating an electrical transmission in the M-cells endings.
  • Two types of oligodendrocytes could be recognized; both reacted intensely with Oligodendrocyte transcription factor 2 (Olig2).
  • The proliferative neurons of the substantia grisea centralis expressed myostatin, Nrf2, and Sox9.
  • The findings of this study suggest that molly fish possess highly developed structural features conducive to spinal cord regeneration. Consequently, they could be deemed an exemplary model for investigating central nervous system regeneration.
与哺乳动物不同,鱼类和两栖动物等物种可以再生受损的脊髓,这为潜在的治疗目标提供了启示。本研究通过光镜和电子显微镜研究了莫利鱼脊髓的结构特征。最显著的特征是存在毛特纳细胞(M细胞),它们表现出大的细胞体和过程,以及与星形胶质细胞的突触连接。这些星形胶质细胞连接含有突触小泡,表明 M 细胞末梢有电传导。用胶质纤维酸性蛋白(GFAP)标记的星形胶质细胞含有细胞质糖原颗粒,可能是一种应急燃料来源。研究人员发现了两种类型的少突胶质细胞:一种是较小的深色细胞,另一种是较大的浅色细胞,这两种细胞都与少突胶质细胞转录因子2(Olig2)有强烈反应。深色少突胶质细胞类似于人类少突胶质细胞前体,而浅色少突胶质细胞则类似于成熟的人类少突胶质细胞。此外,中央灰质中的增殖神经元还表达了myostatin、Nrf2和Sox9。这些发现共同表明,莫利鱼脊髓具有有利于脊髓再生的高级结构特征,可以作为研究中枢神经系统再生的绝佳模型。建议进一步研究莫利鱼脊髓的功能方面。研究亮点:莫莱尔鱼脊髓的最大特征是具有典型的大细胞体和突起的莫莱尔细胞(M细胞),它与星形胶质细胞呈突触连接,其末端含有突触小泡,表明 M 细胞末端有电传递。可以识别出两种类型的少突胶质细胞,它们都与少突胶质细胞转录因子 2(Olig2)有强烈反应。中枢灰质的增殖神经元表达肌生长抑素、Nrf2和Sox9。这项研究结果表明,莫利鱼具有高度发达的有利于脊髓再生的结构特征。因此,它们可被视为研究中枢神经系统再生的典范模型。
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引用次数: 0
Micromorphological study of some Salsola species (Amaranthaceae) in Iran and its systematic significance using scanning electron microscopy 利用扫描电子显微镜对伊朗的一些 Salsola 种(苋科)进行微形态学研究及其系统意义。
IF 2 3区 工程技术 Q2 ANATOMY & MORPHOLOGY Pub Date : 2024-06-24 DOI: 10.1002/jemt.24623
Elham Amini, Ali Sattarian, Fatemeh Nasrollahi, Abolfazl Daneshvar, Majid Mohammad Esmaeili, Leila Hamidzadeh Sani, Sona Haghighi

Using scanning electron microscopy (SEM), six Salsola species from Iran were examined for their epidermis, seed, and fruit micromorphology. Among them were S. brachiata from section Heterotricha, S dendroides, S. incanescens, and S. orientalis from section Caroxylon, S. kali from section Kali, and S. turcomanica from section Physurus. Epidermal cells are divided into three types. There were diamond, irregular, and polygonal cells, as well as straight and undulated walls. Studied species of Salsola have smooth or sculptured fruit surfaces, and there are three main types of fruit surface ornamentation. There is a significant difference between these species based on the type of hair and density of the fruit. Seed shape and color have little systematic significance. The seed epidermis is composed of polygonal, elongated polygonal, irregular, and diamond cells. Although polygonal and irregular testa cells are most common, their size and shape can provide additional information and useful diagnostic characteristics at both specific and infraspecific levels. For taxonomic separation, the current study provides novel insights at micromorphological levels.

Research Highlights

  • This article reports halophyte are shown as models for adaptation to extreme habitats.
  • These plants are placed among the ecological communities of xerophytes. Here, for the first time, the microstructural analysis of Salsola has been investigated.
  • Additionally, it provides new insights into plant species' response to extreme conditions, as well as possible adaptation strategies at the micromorphological level.
利用扫描电子显微镜(SEM)对伊朗的六个莎草物种的表皮、种子和果实的微观形态进行了研究。其中包括 Heterotricha 部分的 S. brachiata,Caroxylon 部分的 S. dendroides、S. incanescens 和 S. orientalis,Kali 部分的 S. kali,以及 Physurus 部分的 S. turcomanica。表皮细胞分为三种类型。有菱形、不规则和多角形细胞,以及直壁和波状壁。所研究的莎草物种的果实表面光滑或有雕刻,果实表面的装饰有三种主要类型。根据果实的毛发类型和密度,这些物种之间存在明显差异。种子形状和颜色的系统意义不大。种子表皮由多边形、拉长多边形、不规则和菱形细胞组成。虽然多边形和不规则的种皮细胞最为常见,但它们的大小和形状可以在特异性和种下水平上提供额外的信息和有用的诊断特征。在分类学分离方面,目前的研究提供了微形态学层面的新见解。研究亮点:本文报告的卤叶植物是适应极端生境的典范。这些植物属于干旱植物生态群落。本文首次研究了莎草的微观结构分析。此外,它还为植物物种对极端条件的反应以及在微观形态层面可能采取的适应策略提供了新的见解。
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引用次数: 0
Application of lactobacillus casei and lactobacillus plantarum to develop dried functional apple and banana 应用干酪乳杆菌和植物乳杆菌开发功能性苹果和香蕉干。
IF 2 3区 工程技术 Q2 ANATOMY & MORPHOLOGY Pub Date : 2024-06-24 DOI: 10.1002/jemt.24639
Sahar Sabahi, Seyyed Mohammad Ali Noori, Alireza Ekrami, Seyed Ahmad Hosseini, Maryam Seyedtabib, Sousan Akrami

The goal of this research was to create dried fruits loaded with probiotic microorganisms (Lactobacillus casei and Lactobacillus plantarum). In separate bottles for each probiotic microbe, apple and banana pieces have been submerged into the impermeability solution with gentle shaking. The vacuum pressure was applied. By the conclusion of the incubation time, L. casei and L. plantarum colonies were enumerated (CFU/g). The scanning electron microscope method was applied to confirm the penetration of impregnation solutions into the intercellular spaces of fruit tissue. On day 28, the population of L. plantarum was 5 log CFU/g for apples and 5.5 log CFU/g for bananas. After storage, the number of L. casei in apples was 5 log CFU/g and 5.5 log CFU/g, respectively. L. casei was found on the surface of apple and banana tissue. After one-week, whole phenolic content of probiotic-enriched bananas and apples augmented. After storage, the antioxidant activity of all samples decreased greatly. The sensory qualities of the samples were excellent throughout storage in terms of color, quality, scent, sensitivity, chewiness, and general adequacy. As a result, dried apples and bananas infused with L. plantarum and L. casei might be a novel probiotic meal.

Research Highlights

  • Dried apples and bananas infused with L. plantarum and L. casei are novel probiotic meal.
  • After one-week, whole phenolic content of probiotic-enriched bananas and apples augmented.
  • The sensory qualities of the samples were excellent throughout storage in terms of color, quality, scent, sensitivity, chewiness, and general adequacy.
这项研究的目的是制作含有益生微生物(干酪乳杆菌和植物乳杆菌)的干果。每种益生微生物都装在不同的瓶子里,苹果和香蕉碎片被浸没在防渗溶液中,并轻轻摇晃。采用真空压力。培养时间结束后,对 L. casei 和 L. plantarum 菌落进行计数(CFU/g)。采用扫描电子显微镜法确认浸渍溶液是否渗透到水果组织的细胞间隙中。第 28 天,苹果中植物酵母菌的数量为 5 log CFU/g,香蕉为 5.5 log CFU/g。贮藏后,苹果和香蕉中的 L. casei 数量分别为 5 log CFU/g 和 5.5 log CFU/g。苹果和香蕉组织表面都发现了干酪乳杆菌。一周后,富含益生菌的香蕉和苹果的全酚含量增加。贮藏后,所有样品的抗氧化活性都大大降低。在整个贮藏过程中,样品在色泽、质量、气味、敏感度、咀嚼感和总体适口性方面的感官质量都非常好。因此,添加了植物乳杆菌和干酪乳杆菌的苹果干和香蕉干可能是一种新型益生菌食品。研究亮点浸泡了植物乳杆菌和干酪乳杆菌的苹果干和香蕉干是一种新型益生菌餐。一周后,富含益生菌的香蕉和苹果的全酚类物质含量增加。在整个储存过程中,样品在色泽、质量、香味、敏感度、咀嚼感和总体适口性方面的感官质量都非常好。
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引用次数: 0
Anatomy and micromorphology of Tilia species from Turkey and its taxonomic implication 土耳其椴树物种的解剖学和微形态学及其分类学意义。
IF 2 3区 工程技术 Q2 ANATOMY & MORPHOLOGY Pub Date : 2024-06-24 DOI: 10.1002/jemt.24634
Beste Gökhan Strelnikov, Bahar Gürdal

The genus Tilia L. belongs to Malvaceae and it is represented by four species in Turkey. These are T. cordata, T. platyphyllos, T. rubra subsp. caucasica, and T. tomentosa. Tilia species have medicinal importance, especially to treat colds, flu, and coughs, and are also used as sedatives. Inflorescence with bract is recorded in the pharmacopeia as used parts. This study aimed to investigate the differences in leaf and bract characteristics in distinguishing Tilia species. Leaves and bracts were examined anatomically and micromorphologically under light and scanning electron microscopes (LM and SEM). There is no comparative anatomical and micromorphological study of Tilia species from Turkey. Microscopic examination allows for the observation of stomata types, trichomes, and other anatomical structures. These features can vary among species and can aid in differentiation. Features of bract that is medicinally used part were evaluated to find efficient diagnostic characters. The leaves also possess distinct characteristics, and leaf morphology is already used in the identification key in Flora. The emphasis is on identifying the species of medically used drugs. A diagnostic key was created using LM and SEM based on bract features to differentiate taxa for the first time.

Research Highlights

  • Leaf and bract anatomy of Tilia taxa was studied via LM and SEM.
  • The raw plant material is inflorescence with bract so identification by bract is important for species adulteration.
  • An diagnostic key based on bract features was created for the first time.
椴属属于锦葵科,在土耳其有四个品种。它们是 T. cordata、T. platyphyllos、T. rubra subsp.椴树具有重要的药用价值,尤其是治疗感冒、流感和咳嗽,还可用作镇静剂。花序和苞片在药典中被记录为使用部分。本研究旨在调查叶片和苞片特征在区分椴树物种方面的差异。在光镜和扫描电子显微镜(LM 和 SEM)下对叶片和苞片进行了解剖学和微观形态学检查。目前还没有对土耳其的椴树物种进行解剖学和微形态学比较研究。显微镜检查可以观察气孔类型、毛状体和其他解剖结构。这些特征在不同物种之间会有差异,有助于区分。为了找到有效的诊断特征,我们对苞片(药用部分)的特征进行了评估。叶片也具有明显的特征,叶片形态学已被用于《植物志》的鉴定关键中。重点在于识别药用植物的种类。根据苞片特征,首次使用 LM 和 SEM 创建了诊断密钥,以区分类群。研究亮点:通过 LM 和 SEM 研究了椴树类群的叶片和苞片解剖结构。椴树的原材料是带有苞片的花序,因此通过苞片进行鉴别对于物种掺假非常重要。首次创建了基于苞片特征的诊断密钥。
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引用次数: 0
Revealing tick diversity: Chemical profiling and dynamics in scanning microscopy and molecular phylogenetics 揭示蜱虫多样性:扫描显微镜和分子系统学中的化学剖析和动力学。
IF 2 3区 工程技术 Q2 ANATOMY & MORPHOLOGY Pub Date : 2024-06-17 DOI: 10.1002/jemt.24620
Ayesha Malik, Kiran Afshan, Mohammad K. Okla, Ibrahim A. Saleh, Abdul Razzaq, Munib Hussain, Sabika Firasat, Erinda Lika, Màrius Vicent Fuentes

This study presents a comprehensive investigation into the evolutionary trajectories of Rhipicephalus ticks (Ixodidae) through the interpretation of molecular phylogenetics, elucidating their chromatographic spectrum. The use of advanced chromatographic tools in this study explored the dynamics chemical profiling, providing valuable insights into the evolutionary history and ecological adaptations. Prevalence of Rhipicephalus ticks was 4.5% in sheep and 3.9% in goats. The ITS2 sequence of the Rhipicephalus sanguineus (OK642408) and Rhipicephalus microplus (OK642409) form a distinct clade with sequences from other countries. The 16S rRNA sequences of R. sanguineus (OK560870) clustered with sequences form three lineages, tropical, temperate, and south-eastern. The Cox I gene-identified Rhipicephalus turanicus (OK623472) and R. microplus (OK623463) form separate clades with sequences. The HPLC chromatogram of tick samples reveals a diverse array of identified hydrocarbons, explained the complex chemical composition of their exoskeletons. This analytical approach provides valuable insights into the specific hydrocarbon profiles, allowing for potential applications in species differentiation, ecological studies, and a deeper understanding of the functional roles played by hydrocarbon compounds in tick physiology. The findings revealed the potential of applying molecular phylogenetics tools with chromatography not only to enhance our understanding of tick evolution but also to inform strategies for disease control and management in regions where Rhipicephalus ticks (Ixodidae) are endemic.

Research Highlights

  • Chemical mapping utilizing advanced chromatographic techniques.
  • Scanning microscopic insights high-resolution scanning tool to observe structural and morphological features of ticks at a molecular level.
  • Molecular phylogeny data elucidate the evolutionary relationships among tick species.
本研究通过对分子系统发生学的解释,阐明了Rhipicephalus蜱(Ixodidae)的色谱谱系,从而对其进化轨迹进行了全面的研究。这项研究利用先进的色谱工具探索了动态化学图谱,为了解蜱的进化历史和生态适应性提供了宝贵的信息。Rhipicephalus蜱在绵羊和山羊中的流行率分别为4.5%和3.9%。Rhipicephalus sanguineus(OK642408)和 Rhipicephalus microplus(OK642409)的 ITS2 序列与其他国家的序列形成了一个独特的支系。R. sanguineus(OK560870)的 16S rRNA 序列与热带、温带和东南部三个品系的序列聚类。经 Cox I 基因鉴定的 Rhipicephalus turanicus(OK623472)和 R. microplus(OK623463)与序列形成独立的支系。蜱虫样本的 HPLC 色谱图显示了一系列不同的已鉴定碳氢化合物,说明它们的外骨骼具有复杂的化学成分。这种分析方法提供了对特定碳氢化合物特征的宝贵见解,可潜在应用于物种区分、生态学研究,以及更深入地了解碳氢化合物在蜱虫生理中发挥的功能作用。研究结果揭示了将分子系统学工具与色谱法结合应用的潜力,这不仅能提高我们对蜱进化的认识,还能为Rhipicephalus蜱(Ixodidae)流行地区的疾病控制和管理策略提供信息。研究亮点:利用先进的色谱技术绘制化学图谱。扫描显微镜洞察高分辨率扫描工具,在分子水平上观察蜱的结构和形态特征。分子系统发育数据阐明蜱物种之间的进化关系。
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引用次数: 0
Adaptive block imaging based on compressive sensing in AFM 基于压缩传感的原子力显微镜自适应块成像。
IF 2 3区 工程技术 Q2 ANATOMY & MORPHOLOGY Pub Date : 2024-06-15 DOI: 10.1002/jemt.24618
Yuchuan Zhang, Yongjian Chen, Teng Wu, Guoqiang Han

Atomic force microscopy (AFM) is a kind of high-precision instrument to measure the surface morphology of various conductive or nonconductive samples. However, obtaining a high-resolution image with standard AFM scanning requires more time. Using block compressive sensing (BCS) is an effective approach to achieve rapid AFM imaging. But, the routine BCS-AFM imaging is difficult to balance the image quality of each local area. It is easy to lead to excessive sampling in some flat areas, resulting in time-consuming. At the same time, there is a lack of sampling in some areas with significant details, resulting in poor imaging quality. Thus, an innovative adaptive BCS-AFM imaging method is proposed. The overlapped block is used to eliminate blocking artifacts. Characteristic parameters (GTV, Lu, and SD) are used to predict the local morphological characteristics of the samples. Back propagation neural network is employed to acquire the appropriate sampling rate of each sub-block. Sampling points are obtained by pre-scanning and adaptive supplementary scanning. Afterward, all sub-block images are reconstructed using the TVAL3 algorithm. Each sample is capable of achieving uniform, excellent image quality. Image visual effects and evaluation indicators (PSNR and SSIM) are employed for the purpose of evaluating and analyzing the imaging effects of samples. Compared with two nonadaptive and two other adaptive imaging schemes, our proposed scheme has the characteristics of a high degree of automation, uniformly high-quality imaging, and rapid imaging speed.

Highlights

  • The proposed adaptive BCS method can address the issues of uneven image quality and slow imaging speed in AFM.
  • The appropriate sampling rate of each sub-block of the sample can be obtained by BP neural network.
  • The introduction of GTV, Lu, and SD can effectively reveal the morphological features of AFM images.
  • Seven samples with different morphology are used to test the performance of the proposed adaptive algorithm.
  • Practical experiments are carried out with two samples to verify the feasibility of the proposed adaptive algorithm.
原子力显微镜(AFM)是一种测量各种导电或不导电样品表面形态的高精度仪器。然而,使用标准 AFM 扫描获得高分辨率图像需要较长的时间。使用块压缩传感(BCS)是实现快速原子力显微镜成像的有效方法。但是,常规的 BCS-AFM 成像很难平衡每个局部区域的图像质量。它容易导致在一些平坦区域过度采样,从而造成耗时。同时,在一些细节明显的区域采样不足,导致成像质量不佳。因此,我们提出了一种创新的自适应 BCS-AFM 成像方法。重叠区块用于消除阻塞伪影。特征参数(GTV、Lu 和 SD)用于预测样本的局部形态特征。采用反向传播神经网络获取每个子块的适当采样率。采样点通过预扫描和自适应补充扫描获得。然后,使用 TVAL3 算法重建所有子块图像。每个样本都能获得均匀、出色的图像质量。图像视觉效果和评价指标(PSNR 和 SSIM)用于评估和分析样本的成像效果。与两种非自适应成像方案和另外两种自适应成像方案相比,我们提出的方案具有自动化程度高、成像质量均匀、成像速度快等特点。亮点:所提出的自适应 BCS 方法可解决原子力显微镜成像质量不均匀和成像速度慢的问题。通过 BP 神经网络可获得样本每个子块的合适采样率。引入 GTV、Lu 和 SD 可以有效揭示原子力显微镜图像的形态特征。我们使用了七个不同形态的样本来测试所提出的自适应算法的性能。利用两个样本进行了实际实验,验证了所提自适应算法的可行性。
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引用次数: 0
期刊
Microscopy Research and Technique
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