Pub Date : 2023-09-01Epub Date: 2023-04-20DOI: 10.1016/j.molbiopara.2023.111560
Sanasam Bijara Devi, Sanjeev Kumar
Malaria is an infectious disease that has been a continuous threat to mankind since the time immemorial. Owing to the complex multi-staged life cycle of the plasmodium parasite, an effective malaria vaccine which is fully protective against the parasite infection is urgently needed to deal with the challenges. In the present study, essential parasite proteins were identified and a chimeric protein with multivalent epitopes was generated. The designed chimeric protein consists of best potential B and T cell epitopes from five different essential parasite proteins. Physiochemical studies of the chimeric protein showed that the modeled vaccine construct was thermo-stable, hydrophilic and antigenic in nature. And the binding of the vaccine construct with Toll-like receptor-4 (TLR-4) as revealed by the molecular docking suggests the possible interaction and role of the vaccine construct in activating the innate immune response. The constructed vaccine being a chimeric protein containing epitopes from different potential candidates could target different stages or pathways of the parasite. Moreover, the approach used in this study is time and cost effective, and can be applied in the discoveries of new potential vaccine targets for other pathogens.
{"title":"Designing a multi-epitope chimeric protein from different potential targets: A potential vaccine candidate against Plasmodium","authors":"Sanasam Bijara Devi, Sanjeev Kumar","doi":"10.1016/j.molbiopara.2023.111560","DOIUrl":"10.1016/j.molbiopara.2023.111560","url":null,"abstract":"<div><p><span>Malaria is an infectious disease that has been a continuous threat to mankind since the time immemorial. Owing to the complex multi-staged life cycle of the plasmodium parasite, an effective malaria vaccine which is fully protective against the parasite infection is urgently needed to deal with the challenges. In the present study, essential parasite proteins were identified and a chimeric protein with multivalent epitopes was generated. The designed chimeric protein consists of best potential B and </span>T cell<span> epitopes from five different essential parasite proteins. Physiochemical studies of the chimeric protein showed that the modeled vaccine construct was thermo-stable, hydrophilic and antigenic in nature. And the binding of the vaccine construct with Toll-like receptor-4 (TLR-4) as revealed by the molecular docking<span> suggests the possible interaction and role of the vaccine construct in activating the innate immune response. The constructed vaccine being a chimeric protein containing epitopes from different potential candidates could target different stages or pathways of the parasite. Moreover, the approach used in this study is time and cost effective, and can be applied in the discoveries of new potential vaccine targets for other pathogens.</span></span></p></div>","PeriodicalId":18721,"journal":{"name":"Molecular and biochemical parasitology","volume":"255 ","pages":"Article 111560"},"PeriodicalIF":1.5,"publicationDate":"2023-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10385140","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-09-01Epub Date: 2023-05-05DOI: 10.1016/j.molbiopara.2023.111574
Catherine S. Nation , Isabel Stephany-Brassesco , Ben L. Kelly , Juan C. Pizarro
Leishmania parasites undergo morphological changes during their infectious life cycle, including developmental transitions within the sandfly vector, culminating in metacyclic stages that are pre-adapted for infection. Upon entering vertebrate host phagocytes, Leishmania differentiate into intracellular amastigotes, the form that is ultimately transmitted back to the vector to complete the life cycle. Although environmental conditions that induce these cellular transitions are well-established, molecular mechanisms governing Leishmania morphologic differentiation in response to these cues remain largely uncharacterized. Previous studies indicate a key role for HSP83 in both promastigote metacyclogenesis and amastigote differentiation. To further elucidate HSP83 functions in the Leishmania lifecycle, we examined the biological impact of experimentally elevating HSP83 gene expression in Leishmania. Significantly, HSP83 overexpression was associated with altered metacyclic morphology, increased protein kinase A (PKA) activity and decreased expression of the Leishmania major surface protease, GP63. Corroborating these findings, overexpression of the L. amazonensis PKA catalytic subunit resulted in a largely similar phenotype. Our findings demonstrate for the first time in Leishmania, a functional link between HSP83 and PKA in the control of Leishmania gene expression, replication and morphogenesis.
{"title":"Transgenic overexpression of heat shock protein (HSP83) enhances protein kinase A activity, disrupts GP63 surface protease expression and alters promastigote morphology in Leishmania amazonensis","authors":"Catherine S. Nation , Isabel Stephany-Brassesco , Ben L. Kelly , Juan C. Pizarro","doi":"10.1016/j.molbiopara.2023.111574","DOIUrl":"10.1016/j.molbiopara.2023.111574","url":null,"abstract":"<div><p><span><em>Leishmania</em></span><span> parasites undergo morphological changes during their infectious life cycle, including developmental transitions within the sandfly<span> vector, culminating in metacyclic stages that are pre-adapted for infection. Upon entering vertebrate host phagocytes, </span></span><em>Leishmania</em><span> differentiate into intracellular amastigotes, the form that is ultimately transmitted back to the vector to complete the life cycle. Although environmental conditions that induce these cellular transitions are well-established, molecular mechanisms governing </span><em>Leishmania</em><span> morphologic differentiation in response to these cues remain largely uncharacterized. Previous studies indicate a key role for HSP83 in both promastigote<span> metacyclogenesis and amastigote differentiation. To further elucidate HSP83 functions in the </span></span><em>Leishmania</em> lifecycle, we examined the biological impact of experimentally elevating HSP83 gene expression in <em>Leishmania</em><span>. Significantly, HSP83 overexpression was associated with altered metacyclic morphology, increased protein kinase A (PKA) activity and decreased expression of the </span><em>Leishmania</em> major surface protease, GP63. Corroborating these findings, overexpression of the <em>L. amazonensis</em><span> PKA catalytic subunit resulted in a largely similar phenotype. Our findings demonstrate for the first time in </span><em>Leishmania</em>, a functional link between HSP83 and PKA in the control of <em>Leishmania</em><span> gene expression, replication and morphogenesis.</span></p></div>","PeriodicalId":18721,"journal":{"name":"Molecular and biochemical parasitology","volume":"255 ","pages":"Article 111574"},"PeriodicalIF":1.5,"publicationDate":"2023-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10000885","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-09-01Epub Date: 2023-06-09DOI: 10.1016/j.molbiopara.2023.111575
Bian-hua Zhou , Hai-yan Ding , Jing-yun Yang , Jun Chai , Hong-wei Guo , Er-jie Tian
Diclazuril is a classic anticoccidial drug. The key molecules of diclazuril in anticoccidial action allows target screening for the development of anticoccidial drugs. Cyclin-dependent kinases (CDK) are prominent target proteins in apicomplexan parasites. In this study, a diclazuril anticoccidiosis animal model was established, and the transcription and translation levels of the CDK-related kinase 2 of Eimeria tenella (EtCRK2) were detected. mRNA and protein expression levels of EtCRK2 decreased in the infected/diclazuril group compared with those in the infected/control group. In addition, immunofluorescence analysis showed that EtCRK2 was localised in the cytoplasm of the merozoites. The fluorescence intensity of EtCRK2 in the infected/diclazuril group was significantly weaker than that in the infected/control group. The anticoccidial drug diclazuril against E.tenella affects the expression pattern of EtCRK2 molecule, and EtCRK2 is a potential target for new drug development.
{"title":"Diclazuril-induced expression of CDK-related kinase 2 in the second-generation merozoites of Eimeria tenella","authors":"Bian-hua Zhou , Hai-yan Ding , Jing-yun Yang , Jun Chai , Hong-wei Guo , Er-jie Tian","doi":"10.1016/j.molbiopara.2023.111575","DOIUrl":"10.1016/j.molbiopara.2023.111575","url":null,"abstract":"<div><p><span><span>Diclazuril is a classic anticoccidial drug. The key molecules of diclazuril in anticoccidial action allows target screening for the development of anticoccidial drugs. Cyclin-dependent kinases (CDK) are prominent target proteins in </span>apicomplexan<span> parasites. In this study, a diclazuril anticoccidiosis animal model was established, and the transcription and translation levels of the CDK-related kinase 2 of </span></span><span><em>Eimeria tenella</em></span> (<em>Et</em>CRK2) were detected. mRNA and protein expression levels of <em>Et</em>CRK2 decreased in the infected/diclazuril group compared with those in the infected/control group. In addition, immunofluorescence analysis showed that <em>Et</em>CRK2 was localised in the cytoplasm of the merozoites. The fluorescence intensity of <em>Et</em>CRK2 in the infected/diclazuril group was significantly weaker than that in the infected/control group. The anticoccidial drug diclazuril against <em>E.tenella</em> affects the expression pattern of <em>Et</em>CRK2 molecule, and <em>Et</em>CRK2 is a potential target for new drug development.</p></div>","PeriodicalId":18721,"journal":{"name":"Molecular and biochemical parasitology","volume":"255 ","pages":"Article 111575"},"PeriodicalIF":1.5,"publicationDate":"2023-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9992117","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Toxoplasmosis is a zoonotic disease that infects most animals, including humans. Pyrimethamine/sulfadiazine is the standard treatment for toxoplasmosis. Although this treatment has been successful, it is often associated with side effects that cannot be tolerated. Therefore, various compounds have been proposed as alternative treatments for toxoplasmosis. Antimicrobial peptides (AMPs) act on various pathogens, from viruses to protozoa.
The purpose of the present study was to evaluate the effects of CM11 on in vitro and in vivo Toxoplasma gondii infection. For in vitro experiments, VERO cells were treated with different concentrations of CM11 (1–128 μg/ml) compared to sulfadiazine (SDZ) (0.78–100 μg/ml). MTT and lactate dehydrogenase (LDH) assays evaluated the cell viability and plasma membrane integrity. Then, the inhibitory concentration (IC50) values were determined for treating tachyzoites of T. gondii before or on cells previously infected. Annexin V-FITC/propidium iodide (PI) staining was used to distinguish viable and apoptotic cells. The effect of CM11, SDZ, and a combination of CM11 and SDZ was evaluated in the BALB/c mouse model of acute toxoplasmosis.
CM11 was effective on tachyzoites of T. gondii and had a time and dose-dependent manner. The results of the MTT assay showed that the CC50 values of CM11 and SDZ were estimated at 17.4 µg/ml and 62.3 µg/ml after 24-h, respectively. The inhibitory concentration (IC50) of CM11 and SDZ on infected cells was estimated at 1.9 µg/ml and 1.4 µg/ml after 24-h, respectively. The highest rate of apoptosis (early and late) in high concentrations of SDZ and CM11 was determined for tachyzoites (2.13 % and 13.88 %), non-infected VERO cells (6.1 % and 19.76 %), and infected VERO cells (7.45 % and 29.9 %), respectively. Treating infected mice with CM11 and a combination of CM11 and SDZ had increased survival time.
Based on the mentioned results, it can be concluded that CM11 has a beneficial effect on tachyzoites of T. gondii in vitro. The result of the mouse model suggests that CM11, either alone or in combination with other chemotherapeutic agents, could be a potential therapeutic for toxoplasmosis. Hence, antimicrobial peptides could be applied as promising anti-toxoplasma agents for treating toxoplasmosis.
{"title":"Anti-parasitic activity of a chimeric peptide Cecropin A (2−8)-Melittin (6−9) (CM11) against tachyzoites of Toxoplasma gondii and the BALB/c mouse model of acute toxoplasmosis","authors":"Zahra Abbasali , Majid Pirestani , Abdolhossein Dalimi , Milad Badri , Mahdi Fasihi-Ramandi","doi":"10.1016/j.molbiopara.2023.111578","DOIUrl":"10.1016/j.molbiopara.2023.111578","url":null,"abstract":"<div><p><span><span>Toxoplasmosis is a </span>zoonotic disease that infects most animals, including humans. Pyrimethamine/sulfadiazine is the standard treatment for toxoplasmosis. Although this treatment has been successful, it is often associated with side effects that cannot be tolerated. Therefore, various compounds have been proposed as alternative treatments for toxoplasmosis. </span>Antimicrobial peptides<span> (AMPs) act on various pathogens, from viruses<span> to protozoa.</span></span></p><p>The purpose of the present study was to evaluate the effects of CM11 on in vitro and in vivo <span><em>Toxoplasma gondii</em></span><span><span><span> infection. For in vitro experiments, VERO cells were treated with different concentrations of CM11 (1–128 μg/ml) compared to sulfadiazine<span> (SDZ) (0.78–100 μg/ml). MTT and lactate dehydrogenase (LDH) assays evaluated the </span></span>cell viability and plasma membrane integrity. Then, the </span>inhibitory concentration (IC</span><sub>50</sub><span>) values were determined for treating tachyzoites of </span><em>T. gondii</em><span> before or on cells previously infected. Annexin V-FITC/propidium iodide (PI) staining was used to distinguish viable and apoptotic cells. The effect of CM11, SDZ, and a combination of CM11 and SDZ was evaluated in the BALB/c mouse model of acute toxoplasmosis.</span></p><p>CM11 was effective on tachyzoites of <em>T. gondii</em><span> and had a time and dose-dependent manner. The results of the MTT assay showed that the CC</span><sub>50</sub> values of CM11 and SDZ were estimated at 17.4 µg/ml and 62.3 µg/ml after 24-h, respectively. The inhibitory concentration (IC<sub>50</sub>) of CM11 and SDZ on infected cells was estimated at 1.9 µg/ml and 1.4 µg/ml after 24-h, respectively. The highest rate of apoptosis (early and late) in high concentrations of SDZ and CM11 was determined for tachyzoites (2.13 % and 13.88 %), non-infected VERO cells (6.1 % and 19.76 %), and infected VERO cells (7.45 % and 29.9 %), respectively. Treating infected mice with CM11 and a combination of CM11 and SDZ had increased survival time.</p><p>Based on the mentioned results, it can be concluded that CM11 has a beneficial effect on tachyzoites of <em>T. gondii</em> in vitro. The result of the mouse model suggests that CM11, either alone or in combination with other chemotherapeutic agents, could be a potential therapeutic for toxoplasmosis. Hence, antimicrobial peptides could be applied as promising anti-<span><em>toxoplasma</em></span> agents for treating toxoplasmosis.</p></div>","PeriodicalId":18721,"journal":{"name":"Molecular and biochemical parasitology","volume":"255 ","pages":"Article 111578"},"PeriodicalIF":1.5,"publicationDate":"2023-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10048949","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Glutathione transferase enzymes (GSTs) are believed to be a major detoxification system in helminth parasites and have been associated with immunomodulation of the host response. Echinococcus granulosus sensu lato (s.l.) is a cestode parasite known to express at least five different GSTs, but no Omega-class enzymes have been reported in this parasite or in any other cestode. Herein we report the identification of a new member of the GST superfamily in E. granulosus s.l., which is phylogenetically related to the Omega-class: EgrGSTO. Through mass spectrometry, we showed that the 237 amino acids protein EgrGSTO is expressed by the parasite. Moreover, we identified homologues of EgrGSTO in other eight members of the Taeniidae family, including E. canadensis, E. multilocularis, E. oligarthrus, Hydatigera taeniaeformis, Taenia asiatica, T. multiceps, T. saginata and T. solium. A manual sequence inspection and rational modification yielded eight Taeniidae’s GSTO sequences, each one encoding for a 237 aa polypeptide showing 80.2% overall identity. To the best of our knowledge, this is the first description of genes encoding for Omega-class GSTs in worms belonging to the Taeniidae family -that at least in E. granulosus s.l. is expressed as a protein- suggesting the gene encodes for a functional protein.
{"title":"Identification of Omega-class glutathione transferases in helminths of the Taeniidae family","authors":"Sebastián Miles, Gustavo Mourglia-Ettlin, Verónica Fernández","doi":"10.1016/j.molbiopara.2023.111559","DOIUrl":"10.1016/j.molbiopara.2023.111559","url":null,"abstract":"<div><p><span><span><span><span>Glutathione </span>transferase </span>enzymes (GSTs) are believed to be a major detoxification system in </span>helminth parasites<span> and have been associated with immunomodulation of the host response. </span></span><span><em>Echinococcus granulosus</em><em> sensu lato</em></span><span> (s.l.) is a cestode parasite known to express at least five different GSTs, but no Omega-class enzymes have been reported in this parasite or in any other cestode. Herein we report the identification of a new member of the GST superfamily in </span><em>E. granulosus</em><span> s.l., which is phylogenetically related to the Omega-class: EgrGSTO. Through mass spectrometry<span><span>, we showed that the 237 amino acids protein EgrGSTO is expressed by the parasite. Moreover, we identified homologues of EgrGSTO in other eight members of the </span>Taeniidae family, including </span></span><em>E. canadensis</em>, <em>E. multilocularis</em>, <em>E. oligarthrus</em>, <span><em>Hydatigera taeniaeformis</em></span>, <span><em>Taenia asiatica</em></span>, <em>T. multiceps</em>, <em>T. saginata</em> and <em>T. solium</em>. A manual sequence inspection and rational modification yielded eight Taeniidae’s GSTO sequences, each one encoding for a 237 aa polypeptide showing 80.2% overall identity. To the best of our knowledge, this is the first description of genes encoding for Omega-class GSTs in worms belonging to the Taeniidae family -that at least in <em>E. granulosus</em> s.l. is expressed as a protein- suggesting the gene encodes for a functional protein.</p></div>","PeriodicalId":18721,"journal":{"name":"Molecular and biochemical parasitology","volume":"254 ","pages":"Article 111559"},"PeriodicalIF":1.5,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9436359","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-06-01Epub Date: 2023-04-20DOI: 10.1016/j.molbiopara.2023.111561
Huaina Qiu , Ruohan Wang , Junmin Xing , Lu Li , Zhiyan Gao , Jiajie Li , Chao Fang , Feihu Shi , Feng Mo , Lin Liu , Yi Zhao , Hongyan Xie , Shan Zhao , Jun Huang
Interleukin 9 (IL-9) is an effective cytokine secreted by newly defined Th9 cells, which is involved in allergic and infectious diseases. In this study, lymphocytes were isolated from mesenteric lymph node (MLN), spleen, liver, lung, and Peyer’s patches (PP) of C57BL/6 mice 5–6 weeks after S. japonicum infection, intracellular cytokine staining was done to detect the percentage of IL-9-producing CD4+ T cells. The qPCR and ELISA were used to verify the content of IL-9 in MLN. The population of IL-9-producing lymphocyte subset was identified by FACS. In addition, the dynamic changes and cytokine profiles of Th9 cells in the MLN of infected mice were detected by FACS. ELISA was used to detect IL-9 induced by soluble egg antigen (SEA) from isolated lymphocytes in mouse MLN. The results showed that the percentage of IL-9-secreting Th9 cells in the MLN of the infected mouse was higher than that in the spleen, liver, lung, or PP. Though CD8+ Tc cells, NKT cells, and γδT cells could secrete IL-9, CD4+ Th cells were the main source of IL-9 in S. japonicum-infected C57BL/6 mice (P < 0.05). The percentage of Th9 cells in MLN of infected mouse increased from week 3–4, and reached a peak at week 5–6, then began to decrease from week 7–8 (P < 0.05). Moreover, Th9 cells could also secrete a small amount of IL-4, IFN-γ, IL-5, and IL-10. Our results suggested a higher percentage of Th9 cells was induced in the MLN of S. japonicum-infected mice, which might play an important role in the early stage of S. japonicum-induced disease.
{"title":"Characteristics of Th9 cells in Schistosoma japonicum-infected C57BL/6 mouse mesenteric lymph node","authors":"Huaina Qiu , Ruohan Wang , Junmin Xing , Lu Li , Zhiyan Gao , Jiajie Li , Chao Fang , Feihu Shi , Feng Mo , Lin Liu , Yi Zhao , Hongyan Xie , Shan Zhao , Jun Huang","doi":"10.1016/j.molbiopara.2023.111561","DOIUrl":"10.1016/j.molbiopara.2023.111561","url":null,"abstract":"<div><p><span>Interleukin 9<span> (IL-9) is an effective cytokine secreted by newly defined Th9 cells, which is involved in allergic and infectious diseases. In this study, lymphocytes were isolated from mesenteric lymph node (MLN), spleen, liver, lung, and Peyer’s patches (PP) of C57BL/6 mice 5–6 weeks after </span></span><em>S. japonicum</em><span> infection, intracellular cytokine staining was done to detect the percentage of IL-9-producing CD4</span><sup>+</sup><span><span> T cells. The qPCR and </span>ELISA<span><span> were used to verify the content of IL-9 in MLN. The population of IL-9-producing </span>lymphocyte subset was identified by FACS. In addition, the dynamic changes and cytokine profiles of Th9 cells in the MLN of infected mice were detected by FACS. ELISA was used to detect IL-9 induced by soluble egg antigen (SEA) from isolated lymphocytes in mouse MLN. The results showed that the percentage of IL-9-secreting Th9 cells in the MLN of the infected mouse was higher than that in the spleen, liver, lung, or PP. Though CD8</span></span><sup>+</sup><span> Tc cells, NKT cells, and γδT cells could secrete IL-9, CD4</span><sup>+</sup> Th cells were the main source of IL-9 in <em>S. japonicum</em>-infected C57BL/6 mice (<em>P</em> < 0.05). The percentage of Th9 cells in MLN of infected mouse increased from week 3–4, and reached a peak at week 5–6, then began to decrease from week 7–8 (<em>P</em> < 0.05). Moreover, Th9 cells could also secrete a small amount of IL-4, IFN-γ, IL-5, and IL-10. Our results suggested a higher percentage of Th9 cells was induced in the MLN of <em>S. japonicum-</em>infected mice, which might play an important role in the early stage of <em>S. japonicum</em>-induced disease.</p></div>","PeriodicalId":18721,"journal":{"name":"Molecular and biochemical parasitology","volume":"254 ","pages":"Article 111561"},"PeriodicalIF":1.5,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9438648","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-06-01Epub Date: 2023-02-21DOI: 10.1016/j.molbiopara.2023.111557
Zheng Xiang , Danlin Li , Siqi Wang , Ting Shen , Wen He , Mier Li , Weilin Zeng , Xi Chen , Yanrui Wu , Liwang Cui , Zhaoqing Yang
A fast, simple, easy, efficient, and inexpensive method for DNA extraction from malaria parasites collected on filter paper would be very useful for molecular surveillance. The quality and quantity of DNA are critical to molecular diagnosis and analysis. Here, we developed a simple alkali lysis method for DNA extraction from blood samples on filter paper. The results showed that 10–50 mM NaOH and deionized water all effectively isolated parasite DNA at higher parasitemia, as witnessed by successful PCR amplification, while at a parasitemia of 0.01%, the 10 mM NaOH lysis condition generated the best results. Furthermore, DNA extracted by this method was successfully used to amplify a fragment of > 2000 bp. This method successfully extracted DNA from 1 µl of blood at a parasitemia as low as 0.0001% (equivalent to 5 parasites /µl). The DNA isolated by the 10 mM NaOH lysis method was stable to yield PCR products after storage at 4 °C or − 20 °C for 12 months. These results indicate that this alkali lysis method is simple, effective, sensitive, and inexpensive for isolating stable Plasmodium DNA from dried blood spots on filter paper.
一种快速、简单、简单、高效、廉价的方法从滤纸上收集的疟原虫中提取DNA,对分子监测非常有用。DNA的质量和数量对分子诊断和分析至关重要。在这里,我们开发了一种简单的碱裂解法,用于在滤纸上从血液样本中提取DNA。结果表明,10–50 mM NaOH和去离子水都能在较高的寄生虫血症下有效分离寄生虫DNA,如成功的PCR扩增所示,而在0.01%的寄生虫血症时,10 mM NaOH裂解条件产生了最好的结果。此外,通过该方法提取的DNA被成功地用于扩增>;2000 bp。该方法成功地从1µl血液中提取了DNA,寄生虫血症低至0.0001%(相当于5个寄生虫/µl)。通过10mM NaOH裂解法分离的DNA在4°C或−20°C下储存12个月后稳定产生PCR产物。这些结果表明,这种碱裂解方法简单、有效、灵敏、廉价,可以从滤纸上干燥的血点中分离稳定的疟原虫DNA。
{"title":"A simple alkali lysis method for Plasmodium falciparum DNA extraction from filter paper blood samples","authors":"Zheng Xiang , Danlin Li , Siqi Wang , Ting Shen , Wen He , Mier Li , Weilin Zeng , Xi Chen , Yanrui Wu , Liwang Cui , Zhaoqing Yang","doi":"10.1016/j.molbiopara.2023.111557","DOIUrl":"10.1016/j.molbiopara.2023.111557","url":null,"abstract":"<div><p>A fast, simple, easy, efficient, and inexpensive method for DNA extraction from malaria parasites collected on filter paper would be very useful for molecular surveillance. The quality and quantity of DNA are critical to molecular diagnosis and analysis. Here, we developed a simple alkali lysis method for DNA extraction from blood samples on filter paper. The results showed that 10–50 mM NaOH and deionized water all effectively isolated parasite DNA at higher parasitemia, as witnessed by successful PCR amplification, while at a parasitemia of 0.01%, the 10 mM NaOH lysis condition generated the best results. Furthermore, DNA extracted by this method was successfully used to amplify a fragment of > 2000 bp. This method successfully extracted DNA from 1 µl of blood at a parasitemia as low as 0.0001% (equivalent to 5 parasites /µl). The DNA isolated by the 10 mM NaOH lysis method was stable to yield PCR products after storage at 4 °C or − 20 °C for 12 months. These results indicate that this alkali lysis method is simple, effective, sensitive, and inexpensive for isolating stable <em>Plasmodium</em> DNA from dried blood spots on filter paper.</p></div>","PeriodicalId":18721,"journal":{"name":"Molecular and biochemical parasitology","volume":"254 ","pages":"Article 111557"},"PeriodicalIF":1.5,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10214771/pdf/nihms-1898997.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9913867","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-06-01Epub Date: 2023-02-02DOI: 10.1016/j.molbiopara.2023.111556
Yating Li , Lujun Yan , Duojie Ci , Rui Li , Wanjing Li , Tianqi Xia , Hengzhi Shi , Mazhar Ayaz , Yadong Zheng , Pu Wang
Cyst echinococcosis, caused by Echinococcus granulosus, remains a zoonotic disease posing a great threat to public health and meat production industry. Sheep infected with E. granulosus show relatively high abundance of egr-miR-71 in the sera, but its role is unknown. Using bioinformatics and cell migration and Transwell assays, we comparatively analyzed the proteomes and cell invasion of sheep PBMCs in response to egr-miR-71 overexpression. The results showed that the egr-miR-71 induced a total of 157 proteins being differentially expressed and mainly involved in immune responses. In sheep PBMCs, egr-miRNA-71 overexpression induced significant downregulation of macrophage migration inhibitory factor (MIF) and accordingly promoted cell migration and invasion compared with the control. The results will provide a clue for further investigation of a role of circulating egr-miR-71 in immune responses during E. granulosus infection.
{"title":"Analysis of sheep peripheral blood mononuclear cells in response to Echinococcus granulosus microRNA-71 overexpression","authors":"Yating Li , Lujun Yan , Duojie Ci , Rui Li , Wanjing Li , Tianqi Xia , Hengzhi Shi , Mazhar Ayaz , Yadong Zheng , Pu Wang","doi":"10.1016/j.molbiopara.2023.111556","DOIUrl":"10.1016/j.molbiopara.2023.111556","url":null,"abstract":"<div><p><span>Cyst echinococcosis, caused by </span><span><em>Echinococcus granulosus</em></span><span>, remains a zoonotic disease posing a great threat to public health and meat production industry. Sheep infected with </span><em>E. granulosus</em><span> show relatively high abundance of egr-miR-71 in the sera, but its role is unknown. Using bioinformatics and cell migration and Transwell assays, we comparatively analyzed the proteomes<span> and cell invasion of sheep PBMCs in response to egr-miR-71 overexpression. The results showed that the egr-miR-71 induced a total of 157 proteins being differentially expressed and mainly involved in immune responses. In sheep PBMCs, egr-miRNA-71 overexpression induced significant downregulation of macrophage migration inhibitory factor (MIF) and accordingly promoted cell migration and invasion compared with the control. The results will provide a clue for further investigation of a role of circulating egr-miR-71 in immune responses during </span></span><em>E. granulosus</em> infection.</p></div>","PeriodicalId":18721,"journal":{"name":"Molecular and biochemical parasitology","volume":"254 ","pages":"Article 111556"},"PeriodicalIF":1.5,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9435289","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Current chemotherapy against the Surra organism, Trypanosoma evansi has several limitations in terms of efficacy, toxicity, availability and emerging resistance. These reasons make the search of new chemo-preventive and chemo-therapeutic agent with high potency and low toxicity. Alkaloid phyto-molecules, berberine has shown promising anti-kinetoplastid activity against T. cruzi, T. congolense, T. brucei, Leishmania donovani and L. tropica. However, till date, there is no investigation of therapeutic efficacy of berberine chloride (BC) against T. evansi. The IC50 value of BC for growth inhibition of T. evansi at 24 h of culture was calculated as 12.15 µM. The specific selectivity index (SSI) of BC was calculated as 19.01 and 10.43 against Vero cell line and Equine PBMC’s, respectively. Thirteen drug target genes affecting various metabolic pathways were studied to investigate the mode of trypanocidal action of BC. In transcript analysis, the mRNA expression of arginine kinase 1 remained refractory to exposure with BC, which provides metabolic plasticity in adverse environmental conditions. In contrary, rest all the drug target gene were down-regulated, which indicates that drug severely affect DNA replication, cell proliferation, energy homeostasis, redox homeostasis and calcium homeostasis of T. evansi, leading to the death of parasite in low concentrations. It is the first attempt to investigate in vitro anti-trypanosomal activity of BC against T. evansi. These data imply that phytochemicals as alternative strategies can be explored in the future as an alternative treatment for Surra in animal.
{"title":"In vitro and in vivo evaluation of efficacy of berberine chloride: Phyto-alternative approach against Trypanosoma evansi infection","authors":"Snehil Gupta , Sukhdeep Vohra , Khushboo Sethi , Ruma Rani , Surbhi Gupta , Sanjay Kumar , Rajender Kumar","doi":"10.1016/j.molbiopara.2023.111562","DOIUrl":"10.1016/j.molbiopara.2023.111562","url":null,"abstract":"<div><p>Current chemotherapy against the <em>Surra</em> organism, <span><em>Trypanosoma evansi</em></span> has several limitations in terms of efficacy, toxicity, availability and emerging resistance. These reasons make the search of new chemo-preventive and chemo-therapeutic agent with high potency and low toxicity. Alkaloid phyto-molecules, berberine has shown promising anti-kinetoplastid activity against <em>T. cruzi</em>, <em>T. congolense</em>, <em>T. brucei</em>, <span><em>Leishmania donovani</em></span> and <em>L. tropica</em>. However, till date, there is no investigation of therapeutic efficacy of berberine chloride (BC) against <em>T. evansi</em>. The IC<sub>50</sub> value of BC for growth inhibition of <em>T. evansi</em><span><span><span><span> at 24 h of culture was calculated as 12.15 µM. The specific selectivity index (SSI) of BC was calculated as 19.01 and 10.43 against </span>Vero cell line and Equine PBMC’s, respectively. Thirteen drug target genes affecting various metabolic pathways were studied to investigate the mode of trypanocidal action of BC. In transcript analysis, the mRNA expression of </span>arginine kinase 1 remained refractory to exposure with BC, which provides metabolic plasticity in adverse environmental conditions. In contrary, rest all the drug target gene were down-regulated, which indicates that drug severely affect </span>DNA replication<span><span>, cell proliferation, energy </span>homeostasis<span>, redox homeostasis and calcium homeostasis of </span></span></span><em>T. evansi</em>, leading to the death of parasite in low concentrations. It is the first attempt to investigate <em>in vitro</em> anti-trypanosomal activity of BC against <em>T. evansi</em><span>. These data imply that phytochemicals as alternative strategies can be explored in the future as an alternative treatment for </span><em>Surra</em> in animal.</p></div>","PeriodicalId":18721,"journal":{"name":"Molecular and biochemical parasitology","volume":"254 ","pages":"Article 111562"},"PeriodicalIF":1.5,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9491885","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-06-01Epub Date: 2023-04-20DOI: 10.1016/j.molbiopara.2023.111563
Jenna M. Hulke, Charles D. Criscione
We developed microsatellite markers to use in studying the population genetics of the trematode Alloglossidium renale, a fluke with a precocious life cycle where sexual maturation occurs in a grass shrimp. Among 21 tested loci in a Mississippi population sample, 14 were polymorphic, 12 of which significantly deviated from Hardy-Weinberg Equilibrium (HWE). We estimated identity disequilibrium (ID) to confirm whether the deviations from HWE were due to significant amounts of selfing or due to technical factors. The selfing rate derived from FIS was 86.6%, whereas the selfing rate obtained by ID was 83.9%, indicating that the deviation in HWE was due to a high amount of selfing within the population. These markers will be useful for ecological and evolutionary studies of A. renale especially in relation to the interplay of hermaphroditic mating systems, inbreeding depression, and transmission dynamics.
{"title":"Characterization of 21 microsatellite loci for the precocious, grass-shrimp trematode Alloglossidium renale","authors":"Jenna M. Hulke, Charles D. Criscione","doi":"10.1016/j.molbiopara.2023.111563","DOIUrl":"10.1016/j.molbiopara.2023.111563","url":null,"abstract":"<div><p><span>We developed microsatellite markers<span> to use in studying the population genetics of the trematode </span></span><em>Alloglossidium renale</em><span>, a fluke with a precocious life cycle where sexual maturation occurs in a grass shrimp<span>. Among 21 tested loci in a Mississippi population sample, 14 were polymorphic, 12 of which significantly deviated from Hardy-Weinberg Equilibrium (HWE). We estimated identity disequilibrium (ID) to confirm whether the deviations from HWE were due to significant amounts of selfing or due to technical factors. The selfing rate derived from </span></span><em>F</em><sub>IS</sub> was 86.6%, whereas the selfing rate obtained by ID was 83.9%, indicating that the deviation in HWE was due to a high amount of selfing within the population. These markers will be useful for ecological and evolutionary studies of <em>A. renale</em> especially in relation to the interplay of hermaphroditic mating systems, inbreeding depression, and transmission dynamics.</p></div>","PeriodicalId":18721,"journal":{"name":"Molecular and biochemical parasitology","volume":"254 ","pages":"Article 111563"},"PeriodicalIF":1.5,"publicationDate":"2023-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9438647","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}