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Phylogeny and population structure of Echinococcus granulosus (sensu stricto) based on full-length cytb-nad2-atp6 mitochondrial genes – First report from Sialkot District of Pakistan 基于全长cytb-nad2-atp6线粒体基因的细粒棘球蚴(senso stricto)的系统发育和种群结构——巴基斯坦Sialkot地区的首次报告
IF 1.5 4区 医学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-02-01 DOI: 10.1016/j.molbiopara.2022.111542
Mughees Aizaz Alvi , Rana Muhammad Athar Ali , Li Li , Muhammad Saqib , Warda Qamar , Ali Hassan , Muzafar Ghafoor , Siddiq Ur Rahman , Muhammad Umar Zafar Khan , Bao-Quan Fu , Youyu Liu , Hong Yin , Hong-Bin Yan , Wan-Zhong Jia

Cystic echinococcosis is a zoonotic disease of livestock having serious economic setbacks. The etiological agents of the disease belong to Echinococcus granulosus sensu lato. Despite of worldwide distribution of the disease, the molecular studies mainly employ amplification of cox1, nad1 and nad5 genes. To further strengthen the knowledge about significance of other molecular markers and to investigate the genetic diversity and population structure of Echinococcus species in Pakistan, the current study was designed in which full length mitochondrial cytb, atp6 and nad2 genes were amplified. Based on BLAST searches of the generated cytb, atp6 and nad2 gene sequences from a total of 18 hydatid cysts collected from cattle, 12 isolates were identified as E. granulousus G3 and 6 as E. granulosus (G1). The phylogeny inferred by the Bayesian method using nucleotide sequences of cytb-atp6-nad2 further confirmed their identity. The diversity indices indicated a high haplotype and a low nucleotide diversity. The negative values of Tajima’s D and Fu’s Fs test demonstrated deviation from neutrality suggesting a recent population expansion. To the best of our knowledge, the present study described the genetic variation of E. granulosus population for the first time in Pakistan using full-length cytb, atp6 and nad2 mitochondrial genes. The findings on the genetic variation of E. granulosus in Pakistan will constitute useful baseline information for future studies on the prevalence and population structure of E. granulosus based on full-length cytb, atp6 and nad2.

囊性棘球蚴病是一种严重经济困难的牲畜人畜共患疾病。该病的病原属于细粒棘球蚴。尽管该疾病在世界范围内分布,但分子研究主要采用cox1、nad1和nad5基因的扩增。为了进一步加强对其他分子标记意义的认识,并研究巴基斯坦棘球蚴物种的遗传多样性和种群结构,本研究设计了全长线粒体cytb、atp6和nad2基因的扩增。根据对从牛身上采集的18个棘球蚴囊中产生的cytb、atp6和nad2基因序列的BLAST搜索,12个分离株被鉴定为颗粒棘球蚴G3,6个被鉴定为细粒棘球蚴G1。使用cytb-atp6-nad2的核苷酸序列通过贝叶斯方法推断的系统发育进一步证实了它们的身份。多样性指数显示高单倍型和低核苷酸多样性。Tajima的D和Fu的Fs检验的负值表明偏离了中性,这表明最近的人口扩张。据我们所知,本研究首次使用全长cytb、atp6和nad2线粒体基因描述了巴基斯坦颗粒E.群体的遗传变异。关于巴基斯坦颗粒线虫遗传变异的研究结果将为未来基于全长cytb、atp6和nad2的颗粒线虫流行率和种群结构研究提供有用的基线信息。
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引用次数: 0
Biophysical description of Bromosulfophthalein interaction with the 28-kDa glutathione transferase from Schistosoma japonicum 日本血吸虫28-kDa谷胱甘肽转移酶与溴磺胺基眼蛋白相互作用的生物物理描述
IF 1.5 4区 医学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-11-01 DOI: 10.1016/j.molbiopara.2022.111524
Kagiso Pooe, Monare Thulo, Hattie Makumbe, Blessing Akumadu, Oluwatobin Otun, Chinyere Aloke, Ikechukwu Achilonu

Glutathione transferases (GSTs) are major detoxification enzymes vital for the survival and reproduction of schistosomes during infection in humans. Schistosoma encode two GST isoenzymes, the 26- and 28-kDa isoforms, that show different substrate specificities and cellular localisations. Bromosulfophthalein (BSP) has been identified and characterised as a potent 26-kDa Schistosoma japonicum GST (Sj26GST) inhibitor with an anthelmintic potential. This study describes the structure, function, and ligandin properties of the 28-kDa Schistosoma japonicum GST (Sj28GST) towards BSP. Enzyme kinetics show that BSP is a potent enzyme inhibitor, with a specific activity decreases from 60.4 µmol/min/mg to 0.0742 µmol/min/mg and an IC50 in the micromolar range of 0.74 µM. Far-UV circular dichroism confirmed that purified Sj28GST follows a typical GST fold, which is predominantly alpha-helical. Fluorescence spectroscopy suggests that BSP binding occurs at a site distinct from the glutathione-binding site (G-site); however, the binding does not alter the local G-site environment. Isothermal titration calorimetry studies show that the binding of BSP to Sj28GST is exergonic (∆G°= −33 kJ/mol) and enthalpically-driven, with a stoichiometry of one BSP per dimer. The stability of Sj28GST (∆G(H2O) = 4.7 kcal/mol) is notably lower than Sj26GST, owing to differences in the enzyme’s dimeric interfaces. We conclude that Sj28GST shares similar biophysical characteristics with Sj26GST based on its kinetic properties and susceptibility to low concentrations of BSP. The study supports the potential benefits of re-purposing BSP as a potential drug or prodrug to mitigate the scourge of schistosomiasis.

谷胱甘肽转移酶(GSTs)是人类感染期间血吸虫存活和繁殖的主要解毒酶。血吸虫编码两种GST同工酶,26- kda和28-kDa同工酶,它们表现出不同的底物特异性和细胞定位。溴磺酞(BSP)是一种有效的26 kda日本血吸虫GST (Sj26GST)抑制剂,具有驱虫潜能。本研究描述了28 kda日本血吸虫GST (Sj28GST)对BSP的结构、功能和配体性质。酶动力学表明,BSP是一种有效的酶抑制剂,比活性从60.4µmol/min/mg降至0.0742µmol/min/mg, IC50在0.74µM的微摩尔范围内。远紫外圆二色性证实纯化的Sj28GST遵循典型的GST折叠,主要是α -螺旋。荧光光谱显示BSP结合发生在与谷胱甘肽结合位点(g位点)不同的位点;但是,这种绑定不会改变本地G-site环境。等温滴定量热研究表明,BSP与Sj28GST的结合是逸能的(∆G°= - 33 kJ/mol)和焓驱动的,每个二聚体的化学计量为1 BSP。由于酶的二聚体界面不同,Sj28GST(∆G(H2O) = 4.7 kcal/mol)的稳定性明显低于Sj26GST。基于Sj28GST的动力学特性和对低浓度BSP的敏感性,我们得出Sj26GST与Sj28GST具有相似的生物物理特性。该研究支持将BSP重新用作潜在药物或前药以减轻血吸虫病祸害的潜在益处。
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引用次数: 1
Praziquantel: An update on the mechanism of its action against schistosomiasis and new therapeutic perspectives 吡喹酮:其抗血吸虫病作用机制的最新进展及新的治疗前景
IF 1.5 4区 医学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-11-01 DOI: 10.1016/j.molbiopara.2022.111531
Ranielly Araujo Nogueira , Maria Gabriela Sampaio Lira , Irlla Correia Lima Licá , Gleycka Cristine Carvalho Gomes Frazão , Vitor Augusto Ferreira dos Santos , Antonio Camilo Correia Mendes Filho , João Gustavo Mendes Rodrigues , Guilherme Silva Miranda , Rafael Cardoso Carvalho , Flávia Raquel Fernandes Nascimento

Praziquantel (PZQ) is the drug of choice for the treatment of all forms of schistosomiasis, although its mechanisms of action are not completely understood. PZQ acts largely on adult worms. This narrative literature review describes what is known about the mechanisms of action of PZQ against schistosomes from in vitro and in vivo studies and highlights the molecular targets in parasites and immune responses induced in definitive hosts by this drug. Moreover, new therapeutic uses of PZQ are discussed. Studies have demonstrated that in addition to impacting voltage-operated Ca2 + channels, PZQ may interact with other schistosome molecules, such as myosin regulatory light chain, glutathione S-transferase, and transient receptor potential channels. Following PZQ administration, increased T regulatory type 1 (Tr1) cell differentiation and decreased inflammation were observed, indicating that PZQ promotes immunoregulatory pathways. Although PZQ is widely used in mass drug administration schemes, the existence of resistant parasites has not been proven; however, it is a concern that should be constantly investigated in human populations. In addition, we discuss studies that evaluate health applications of PZQ (other than helminth infection), such as its effect in cancer therapy and its adjuvant action in vaccines against viruses.

吡喹酮(PZQ)是治疗所有形式血吸虫病的首选药物,尽管其作用机制尚不完全清楚。PZQ主要作用于成虫。本文叙述了PZQ在体外和体内对血吸虫的作用机制,并强调了该药物在寄生虫中的分子靶点和在最终宿主中诱导的免疫反应。此外,还讨论了PZQ的新的治疗用途。研究表明,除了影响电压操作的Ca2 +通道外,PZQ还可能与其他血吸虫分子相互作用,如肌球蛋白调节轻链、谷胱甘肽s -转移酶和瞬时受体电位通道。PZQ给药后,观察到T调节性1型(Tr1)细胞分化增加,炎症减少,表明PZQ促进了免疫调节途径。尽管PZQ广泛用于大规模给药计划,但尚未证实存在耐药寄生虫;然而,这是一个值得关注的问题,应该在人群中不断进行调查。此外,我们还讨论了评估PZQ(除蠕虫感染外)的健康应用的研究,例如它在癌症治疗中的作用和它在病毒疫苗中的辅助作用。
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引用次数: 7
Synthesis, in vitro schistosomicidal activity and ultrastructural alterations caused by thiosemicarbazones and thiazolidinones against juvenile and adult Schistosoma mansoni worms (Sambon, 1907) 硫代氨基脲酮和噻唑烷酮对曼氏血吸虫幼虫和成虫体外杀虫活性及超微结构的影响(Sambon, 1907)
IF 1.5 4区 医学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-11-01 DOI: 10.1016/j.molbiopara.2022.111520
Rubens Emanoel Tavares da Rocha , Antônio Sérgio Alves de Almeida Júnior , Nairomberg Cavalcanti Portela Júnior , Amanda Vasconcelos do Nascimento , Nayara Maria Siqueira Leite , Jamerson Ferreira de Oliveira , Maria do Carmo Alves de Lima , Ana Paula Sampaio Feitosa , Maria Eliane Bezerra de Mélo , Fábio André Brayner , Luiz Carlos Alves

Schistosomiasis is a neglected disease that affects about 258 million people worldwide. Caused by Schistosoma mansoni, helminth which, in Brazil, it is present on 19 states and capital. Praziquantel (PZQ) treatment presents low efficacy and adverse effects in parasites juvenile stages. Thiosemicarbazones and thiazolidinones are rising as potent chemical groups that have biological activity wide spectrum, and with radical modifications, they may become more effective and selective. Aiming to evaluate the action of these molecules against S. mansoni, JF series thiosemicarbazones and thiazolidinones (LqIT/UFPE) were synthesized: JF30, JF31, JF33, JF34, JF35, JF36, JF38, JF39, JF42 and JF43. Several parameters were evaluated, such as: their cytotoxicity in VERO cells, in vitro schistosomicidal activity for juvenile and adult worms and their action on worms through ultrastructural changes. Cytotoxicity indices ranged from 272 µM to 725 µM. When evaluating mortality rate, adult and juvenile worms showed 100 % mortality rate within 24 h and 48 h, respectively, when exposed to the compounds JF31 and JF43 at a dose of 200 µM. Also, motility, mortality and oviposition parameters were evaluated: JF31 and JF43 presented a score of 0 in 24 h, meaning total absence of movement, whereas no eggs and soft tissue damage were observed under optical microscopy. Through scanning electron microscopy, integumentary alterations caused by the compounds JF31 and JF43 were observed, such as: exposure of the musculature, formation of integumentary bubbles, integuments with abnormal morphology and destruction of tubercles and spikes. The results shoerd that the compound JF31 was 2.39 times more selective for adult worms and JF43 was 3.74 times more selective for juvenile worms. Thus, the compounds JF43 and JF31 are the most promising for presenting schistosomicidal activity of S. mansoni.

血吸虫病是一种被忽视的疾病,影响着全世界约2.58亿人。由曼森血吸虫引起,这种寄生虫在巴西的19个州和首都都有。吡喹酮(PZQ)治疗寄生虫幼期疗效低,且有不良反应。硫代氨基脲类和噻唑烷酮类作为具有广谱生物活性的强有力的化学基团正在崛起,通过自由基修饰,它们可能变得更加有效和选择性。为了评价这些分子对曼氏梭菌的作用,合成了JF系列硫代氨基脲酮和噻唑烷酮(LqIT/UFPE): JF30、JF31、JF33、JF34、JF35、JF36、JF38、JF39、JF42和JF43。研究了其在VERO细胞中的细胞毒性、对幼虫和成虫的体外杀虫活性以及通过超微结构变化对虫体的作用。细胞毒性指标范围为272µM ~ 725µM。结果表明,JF31和JF43分别在200µM的剂量下,成虫和幼虫在24 h和48 h内的死亡率分别为100%。同时,对JF31和JF43的运动、死亡率和产卵参数进行了评估:JF31和JF43在24 h内得分为0,表示完全不运动,光学显微镜下未观察到卵和软组织损伤。通过扫描电镜观察到化合物JF31和JF43对被膜的影响,如:暴露于肌肉组织,形成被膜气泡,被膜形态异常,结节和尖刺破坏。结果表明,化合物JF31对成虫的选择性高2.39倍,JF43对幼虫的选择性高3.74倍。因此,化合物JF43和JF31最有可能表现出曼氏梭菌的杀血吸虫活性。
{"title":"Synthesis, in vitro schistosomicidal activity and ultrastructural alterations caused by thiosemicarbazones and thiazolidinones against juvenile and adult Schistosoma mansoni worms (Sambon, 1907)","authors":"Rubens Emanoel Tavares da Rocha ,&nbsp;Antônio Sérgio Alves de Almeida Júnior ,&nbsp;Nairomberg Cavalcanti Portela Júnior ,&nbsp;Amanda Vasconcelos do Nascimento ,&nbsp;Nayara Maria Siqueira Leite ,&nbsp;Jamerson Ferreira de Oliveira ,&nbsp;Maria do Carmo Alves de Lima ,&nbsp;Ana Paula Sampaio Feitosa ,&nbsp;Maria Eliane Bezerra de Mélo ,&nbsp;Fábio André Brayner ,&nbsp;Luiz Carlos Alves","doi":"10.1016/j.molbiopara.2022.111520","DOIUrl":"10.1016/j.molbiopara.2022.111520","url":null,"abstract":"<div><p>Schistosomiasis is a neglected disease that affects about 258 million people worldwide. Caused by <span><em>Schistosoma mansoni</em></span><span><span>, helminth which, in Brazil, it is present on 19 states and capital. </span>Praziquantel (PZQ) treatment presents low efficacy and adverse effects in parasites juvenile stages. Thiosemicarbazones and thiazolidinones are rising as potent chemical groups that have biological activity wide spectrum, and with radical modifications, they may become more effective and selective. Aiming to evaluate the action of these molecules against </span><em>S. mansoni</em><span><span><span>, JF series thiosemicarbazones and thiazolidinones (LqIT/UFPE) were synthesized: JF30, JF31, JF33, JF34, JF35, JF36, JF38, JF39, JF42 and JF43. Several parameters were evaluated, such as: their cytotoxicity in VERO cells, in vitro schistosomicidal activity for juvenile and adult worms and their action on worms through ultrastructural changes. Cytotoxicity indices ranged from 272 µM to 725 µM. When evaluating mortality rate, adult and juvenile worms showed 100 % mortality rate within 24 h and 48 h, respectively, when exposed to the compounds JF31 and JF43 at a dose of 200 µM. Also, motility, mortality and oviposition parameters were evaluated: JF31 and JF43 presented a score of 0 in 24 h, meaning total absence of movement, whereas no eggs and soft tissue damage were observed under </span>optical microscopy. Through scanning electron microscopy, integumentary alterations caused by the compounds JF31 and JF43 were observed, such as: exposure of the musculature, formation of integumentary bubbles, </span>integuments with abnormal morphology and destruction of tubercles and spikes. The results shoerd that the compound JF31 was 2.39 times more selective for adult worms and JF43 was 3.74 times more selective for juvenile worms. Thus, the compounds JF43 and JF31 are the most promising for presenting schistosomicidal activity of </span><em>S. mansoni</em>.</p></div>","PeriodicalId":18721,"journal":{"name":"Molecular and biochemical parasitology","volume":"252 ","pages":"Article 111520"},"PeriodicalIF":1.5,"publicationDate":"2022-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10455840","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Alpha-terthienyl increases filamentous actin of Entamoeba histolytica -巯基增加溶组织内阿米巴的丝状肌动蛋白
IF 1.5 4区 医学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-11-01 DOI: 10.1016/j.molbiopara.2022.111512
Mayra Herrera-Martínez , Verónica Ivonne Hernández-Ramírez , Sarita Montaño , Bibiana Chávez-Munguía , Beatriz Hernández-Carlos , Patricia Talamás-Rohana

This study aimed to know if alpha terthienyl (α-T) affects E. histolytica viability and to analyze its effect on the actin cytoskeleton. Trophozoites of E. histolytica HM1-IMSS were treated with α-T, then, cell viability and morphology were evaluated using tetrazolium salts and scanning electron microscopy, respectively; while actin filaments (F-actin) were stained with rhodamine-phalloidin, observed by confocal microscopy and quantified by fluorometry. Data showed that α-T inhibited cell viability of trophozoites (IC50, 19.43 µg / mL), affected the cell morphology, and increased the F-actin in a dose-dependent manner. Production of reactive oxygen species and RhoA-GTP levels remained normal in α-T-treated amebas. Two inhibitors that affect the organization of the trophozoites cytoskeleton, one that interacts directly with actin, Cytochalasin D (CD), and one that affects the Rho signaling pathway by inhibiting the downstream effector Rock, Y27632, were tested. Y27632 did not affect the increase of polymerized actin observed with α-T, this compound partially ameliorates the potent disrupting effects of CD on actin filaments. Docking results suggest that α-T could be an antagonist of CD for the same interaction zone in actin, however, more studies are needed to define the action mechanism of this compound.

本研究旨在了解α-三烯基(α-T)是否影响溶组织芽胞杆菌的生存能力,并分析其对肌动蛋白细胞骨架的影响。用α-T处理溶组织芽孢杆菌HM1-IMSS滋养体,分别用四氮唑盐和扫描电镜观察细胞活力和形态;罗丹明-phalloidin染色肌动蛋白丝(F-actin),共聚焦显微镜观察,荧光定量。结果表明,α-T抑制滋养体细胞活力(IC50为19.43µg / mL),影响细胞形态,并呈剂量依赖性增加F-actin。α- t处理的变形虫的活性氧生成和RhoA-GTP水平保持正常。研究人员测试了两种影响滋养体细胞骨架组织的抑制剂,一种直接与肌动蛋白细胞松弛素D (CD)相互作用,另一种通过抑制下游效应物Rock Y27632来影响Rho信号通路。Y27632不影响α-T观察到的肌动蛋白聚合的增加,该化合物部分改善了CD对肌动蛋白丝的强烈破坏作用。对接结果表明α-T可能是肌动蛋白中相同相互作用带的CD拮抗剂,但该化合物的作用机制尚需进一步研究。
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引用次数: 0
Construction of constitutive expression of Eimeria tenella eukaryotic initiation factor U6L5H2 on the surface of Lactobacillus plantarum and evaluation of its immunoprotective efficiency against chicken coccidiosis 植物乳杆菌表面微球虫真核起始因子U6L5H2组成表达的构建及其对鸡球虫病的免疫保护效果评价
IF 1.5 4区 医学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-11-01 DOI: 10.1016/j.molbiopara.2022.111527
Lingyu Sun , Yaru Lu , Ningning Zhao , Yakun Wang , Bingxiang Wang , Huihui Li , Zhiyuan Wu , Hongmei Li , Xiao Zhang , Xiaomin Zhao

Lactobacillus strains exhibit preferable properties that make them attractive candidates for vaccine delivery systems because of their ability to regulate intestinal mucosal immunity in the body. To date, live Lactobacillus delivery vaccines reported for the defense against Eimeria tenella have been inducer-dependent systems whose applications are significantly limited due to their unattainable induction conditions in vivo. Here, a constitutive expression of Lactobacillus plantarum NC8 surface display system was constructed. Then, this system was used to prepare a live oral vaccine to constitutively express the E. tenella U6L5H2 (EtU6) protein on the NC8 surface and to evaluate its protective efficacy against E. tenella challenge in chickens. The results showed that the heterologous protein (EGFP or EtU6) was successfully expressed on the surface of L. plantarum NC8 without any inducer. The immunoprotection of EtU6 with constitutive expression in L. plantarum NC8 system (NC8/Pc-EtU6) was significantly stronger than that of EtU6 with induced expression of L. plantarum NC8 system (NC8/Pi-EtU6) (ACI: 168.28 vs. 152.74) as evidenced by increased body weight, decreased oocyst output and lesion scores. Furthermore, the constitutive system NC8/Pc-EtU6 produced higher levels of specific cecal SIgA, serum IgG, transcription of cytokines IFN-γ and IL-2, and lymphocyte proliferation than the induced system NC8/Pi-EtU6. These results indicate that, compared to the inducible system, the constitutive surface display system of L. plantarum has the advantages of continuously expressing antigens in vivo and stimulating the host immune system. It could be an ideal platform for vaccine expression. The live vector vaccine for coccidiosis constructed by this constitutive system greatly improves the application potential in chicken production and provides a novel platform for the prevention of coccidiosis in chickens.

乳酸菌菌株表现出更好的特性,使其成为疫苗递送系统的有吸引力的候选者,因为它们具有调节体内肠道黏膜免疫的能力。迄今为止,报道的用于防御柔嫩艾美耳球虫的活乳杆菌递送疫苗都是诱导剂依赖系统,由于其在体内无法达到诱导条件,其应用受到极大限制。本实验构建了植物乳杆菌NC8表面展示系统的本构表达。然后,利用该体系制备了在NC8表面组成性表达tenella U6L5H2 (EtU6)蛋白的口服活疫苗,并评价其对鸡tenella攻毒的保护效果。结果表明,在不添加诱导剂的情况下,外源蛋白(EGFP或EtU6)在植物l.s artarum NC8表面成功表达。在植物L. plantarum NC8系统(NC8/Pc-EtU6)中组成表达的EtU6的免疫保护作用显著强于诱导表达植物L. plantarum NC8系统(NC8/Pi-EtU6)的EtU6 (ACI: 168.28 vs. 152.74),表现为体重增加、卵囊输出量减少和病变评分降低。此外,组成系统NC8/Pc-EtU6比诱导系统NC8/Pi-EtU6产生更高水平的特异性盲肠SIgA、血清IgG、细胞因子IFN-γ和IL-2的转录以及淋巴细胞增殖。这些结果表明,与诱导系统相比,植物乳杆菌的本构表面展示系统具有在体内持续表达抗原和刺激宿主免疫系统的优势。它可能是一个理想的疫苗表达平台。该组成体系构建的球虫病活载体疫苗极大地提高了在鸡生产中的应用潜力,为鸡球虫病的防治提供了新的平台。
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引用次数: 1
Application of a low-cost, specific, and sensitive loop-mediated isothermal amplification (LAMP) assay to detect Plasmodium falciparum imported from Africa 应用低成本、特异、灵敏的环介导等温扩增(LAMP)检测非洲输入恶性疟原虫
IF 1.5 4区 医学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-11-01 DOI: 10.1016/j.molbiopara.2022.111529
Jiaqi Zhang , Xi Chen , Maohua Pan , Yucheng Qin , Hui Zhao , Qi Yang , Xinxin Li , Weilin Zeng , Zheng Xiang , Yanrui Wu , Mengxi Duan , Xiaosong Li , Xun Wang , Dominique Mazier , Yanmei Zhang , Wenya Zhu , Kemin Sun , Yiman Wu , Liwang Cui , Yaming Huang , Zhaoqing Yang

Background

Chinese citizens traveling abroad bring back imported malaria cases to China. Current malaria diagnostic tests, including microscopy and antigen-detecting rapid tests, cannot reliably detect low-density infections. To complement existing diagnostic methods, we aimed to develop a new loop-mediated isothermal amplification (LAMP) assay to detect and identify Plasmodium falciparum in Chinese travelers returning from Africa.

Methods

We developed a miniaturized LAMP assay to amplify the actin I gene of P. falciparum. Each reaction consumed only 25% of the reagents used in a conventional LAMP assay and the same amount of DNA templates used in nested PCR. We evaluated this LAMP assay's performance and compared it to microscopy and a nested PCR assay using 466 suspected malaria cases imported from Africa. We assessed the sensitivity of the new LAMP assay using cultured P. falciparum, clinical samples, and a plasmid construct, allowing unprecedented precision when quantifying the limit of detection.

Results

The new LAMP assay was highly sensitive and detected two more malaria cases than nested PCR. Compared to nested PCR, the sensitivity and specificity of the novel LAMP assay were 100% [95% confidence interval (CI) 98.5–100%] and 99.1% (95% CI 96.7–99.9%), respectively. When evaluated using serial dilutions of the plasmid construct, the detection limit of the new LAMP was as low as 102 copies/μL, 10-fold lower than PCR. The LAMP assay detected 0.01 parasites/μL of blood (equal to 0.04 parasites/μL of DNA) using cultured P. falciparum and 1–7 parasites/μL of blood (4–28 parasites/μL of DNA) in clinical samples, which is as good as or better than previously reported and commercially licensed assays.

Conclusion

The novel LAMP assay based on the P. falciparum actin I gene was specific, sensitive, and cost-effective, as it consumes 1/4 of the reagents in a typical LAMP reaction.

出国旅游的中国公民将输入性疟疾带回中国。目前的疟疾诊断测试,包括显微镜和抗原检测快速测试,不能可靠地检测低密度感染。为了补充现有的诊断方法,我们旨在建立一种新的环介导等温扩增(LAMP)方法来检测和鉴定从非洲返回的中国旅行者的恶性疟原虫。方法建立小型LAMP法扩增恶性疟原虫肌动蛋白I基因。每个反应只消耗传统LAMP测定中所用试剂的25%和巢式PCR中所用DNA模板的相同数量。我们利用466例从非洲输入的疑似疟疾病例评估了LAMP检测的性能,并将其与显微镜和巢式PCR检测进行了比较。我们使用培养的恶性疟原虫、临床样本和质粒构建物评估了新的LAMP检测方法的敏感性,在定量检测限时实现了前所未有的精度。结果LAMP检测灵敏度高,比巢式PCR多检出2例疟疾病例。与巢式PCR相比,新型LAMP检测的灵敏度和特异性分别为100%[95%置信区间(CI) 98.5-100%]和99.1% (95% CI 96.7% - 99.9%)。通过对质粒结构进行连续稀释,新LAMP的检出限低至102拷贝/μL,比PCR低10倍。LAMP法在培养恶性疟原虫的血液中检测到0.01个寄生虫/μL(相当于0.04个寄生虫/μL DNA),在临床样品中检测到1-7个寄生虫/μL(相当于4-28个寄生虫/μL DNA),与以前报道的和商业许可的检测方法一样或更好。结论基于恶性疟原虫肌动蛋白I基因的LAMP检测方法特异性强,灵敏度高,成本低,仅为LAMP反应所需试剂的1/4。
{"title":"Application of a low-cost, specific, and sensitive loop-mediated isothermal amplification (LAMP) assay to detect Plasmodium falciparum imported from Africa","authors":"Jiaqi Zhang ,&nbsp;Xi Chen ,&nbsp;Maohua Pan ,&nbsp;Yucheng Qin ,&nbsp;Hui Zhao ,&nbsp;Qi Yang ,&nbsp;Xinxin Li ,&nbsp;Weilin Zeng ,&nbsp;Zheng Xiang ,&nbsp;Yanrui Wu ,&nbsp;Mengxi Duan ,&nbsp;Xiaosong Li ,&nbsp;Xun Wang ,&nbsp;Dominique Mazier ,&nbsp;Yanmei Zhang ,&nbsp;Wenya Zhu ,&nbsp;Kemin Sun ,&nbsp;Yiman Wu ,&nbsp;Liwang Cui ,&nbsp;Yaming Huang ,&nbsp;Zhaoqing Yang","doi":"10.1016/j.molbiopara.2022.111529","DOIUrl":"10.1016/j.molbiopara.2022.111529","url":null,"abstract":"<div><h3>Background</h3><p>Chinese citizens traveling abroad bring back imported malaria cases to China. Current malaria diagnostic tests, including microscopy and antigen-detecting rapid tests, cannot reliably detect low-density infections. To complement existing diagnostic methods, we aimed to develop a new loop-mediated isothermal amplification (LAMP) assay to detect and identify <em>Plasmodium falciparum</em> in Chinese travelers returning from Africa.</p></div><div><h3>Methods</h3><p>We developed a miniaturized LAMP assay to amplify the <em>actin I</em> gene of <em>P. falciparum</em>. Each reaction consumed only 25% of the reagents used in a conventional LAMP assay and the same amount of DNA templates used in nested PCR. We evaluated this LAMP assay's performance and compared it to microscopy and a nested PCR assay using 466 suspected malaria cases imported from Africa. We assessed the sensitivity of the new LAMP assay using cultured <em>P. falciparum,</em> clinical samples, and a plasmid construct, allowing unprecedented precision when quantifying the limit of detection.</p></div><div><h3>Results</h3><p>The new LAMP assay was highly sensitive and detected two more malaria cases than nested PCR. Compared to nested PCR, the sensitivity and specificity of the novel LAMP assay were 100% [95% confidence interval (CI) 98.5–100%] and 99.1% (95% CI 96.7–99.9%), respectively. When evaluated using serial dilutions of the plasmid construct, the detection limit of the new LAMP was as low as 10<sup>2</sup> copies/μL, 10-fold lower than PCR. The LAMP assay detected 0.01 parasites/μL of blood (equal to 0.04 parasites/μL of DNA) using cultured <em>P. falciparum</em> and 1–7 parasites/μL of blood (4–28 parasites/μL of DNA) in clinical samples, which is as good as or better than previously reported and commercially licensed assays.</p></div><div><h3>Conclusion</h3><p>The novel LAMP assay based on the <em>P. falciparum actin I</em> gene was specific, sensitive, and cost-effective, as it consumes 1/4 of the reagents in a typical LAMP reaction.</p></div>","PeriodicalId":18721,"journal":{"name":"Molecular and biochemical parasitology","volume":"252 ","pages":"Article 111529"},"PeriodicalIF":1.5,"publicationDate":"2022-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9890345/pdf/nihms-1865584.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10653861","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Characterization of adjacent charged residues near the agonist binding site of the nematode UNC-49 GABA receptor 线虫UNC-49 GABA受体激动剂结合位点附近带电残基的表征
IF 1.5 4区 医学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-11-01 DOI: 10.1016/j.molbiopara.2022.111521
Everett Cochrane, Joshua Foster, Mohammad Hassan Khatami, Hendrick W. de Haan, Sean G. Forrester

The UNC-49 receptor is a Cys-loop GABA receptor that is unique to the nematode phylum. The receptor differs from mammalian GABA receptors both in amino acid sequence and pharmacology which highlights its potential as a novel anthelmintic target. Sequence differences within and near the various ligand-binding loops of the nematode receptor suggest that there could be structural differences compared to mammalian receptors that result in different pharmacological and functional features. Here we investigated three residues in the UNC-49 receptor from the parasitic nematode Haemonchus contortus: K181, E183, and T230. Analysis of these residues was conducted via site-directed mutagenesis, electrophysiology, MD simulations, and mutant cycling analysis. In the UNC-49 receptor, E183 lies in close proximity to K181 where together they appear to play a role in GABA sensitivity and pharmacology, possibly interacting via an ionic bond. While the introduction of single alanine residues at each position separately had a negative impact on GABA EC50, the double alanine mutant (K181A/E183A) exhibited wildtype-level GABA EC50 and some differences in pharmacology. Overall, this study has revealed a potentially novel role for these two residues in nematode UNC-49 GABA receptors that could aid in understanding their function.

UNC-49受体是一种Cys-loop GABA受体,是线虫门特有的。该受体与哺乳动物GABA受体在氨基酸序列和药理学上都不同,这突出了它作为一种新的驱虫药靶点的潜力。线虫受体的各种配体结合环内部和附近的序列差异表明,与哺乳动物受体相比,线虫受体可能存在结构差异,从而导致不同的药理学和功能特征。本文研究了弯曲血蜱(Haemonchus contortus)寄生线虫UNC-49受体的三个残基:K181、E183和T230。这些残基的分析是通过位点定向诱变、电生理学、MD模拟和突变循环分析进行的。在UNC-49受体中,E183靠近K181,它们似乎在GABA敏感性和药理学中发挥作用,可能通过离子键相互作用。在每个位置分别引入单个丙氨酸残基对GABA EC50有负面影响,而双丙氨酸突变体(K181A/E183A)表现出野生型水平的GABA EC50,并且在药理学上存在一定差异。总的来说,这项研究揭示了这两个残基在线虫UNC-49 GABA受体中的潜在新作用,可以帮助理解它们的功能。
{"title":"Characterization of adjacent charged residues near the agonist binding site of the nematode UNC-49 GABA receptor","authors":"Everett Cochrane,&nbsp;Joshua Foster,&nbsp;Mohammad Hassan Khatami,&nbsp;Hendrick W. de Haan,&nbsp;Sean G. Forrester","doi":"10.1016/j.molbiopara.2022.111521","DOIUrl":"10.1016/j.molbiopara.2022.111521","url":null,"abstract":"<div><p><span><span>The UNC-49 receptor is a Cys-loop GABA receptor that is unique to the nematode phylum. The receptor differs from mammalian GABA receptors both in </span>amino acid sequence<span> and pharmacology which highlights its potential as a novel anthelmintic target. Sequence differences within and near the various ligand-binding loops of the nematode receptor suggest that there could be structural differences compared to mammalian receptors that result in different pharmacological and functional features. Here we investigated three residues in the UNC-49 receptor from the parasitic nematode </span></span><span><em>Haemonchus contortus</em></span><span><span>: K181, E183, and T230. Analysis of these residues was conducted via site-directed mutagenesis, electrophysiology, MD simulations, and mutant cycling analysis. In the UNC-49 receptor, E183 lies in close proximity to K181 where together they appear to play a role in GABA sensitivity and pharmacology, possibly interacting via an ionic bond. While the introduction of single </span>alanine residues at each position separately had a negative impact on GABA EC</span><sub>50</sub>, the double alanine mutant (K181A/E183A) exhibited wildtype-level GABA EC<sub>50</sub> and some differences in pharmacology. Overall, this study has revealed a potentially novel role for these two residues in nematode UNC-49 GABA receptors that could aid in understanding their function.</p></div>","PeriodicalId":18721,"journal":{"name":"Molecular and biochemical parasitology","volume":"252 ","pages":"Article 111521"},"PeriodicalIF":1.5,"publicationDate":"2022-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10818007","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Editorial - Strongyloides research in the post-genomics era 社论-后基因组时代的类圆线虫研究
IF 1.5 4区 医学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-11-01 DOI: 10.1016/j.molbiopara.2022.111522
Louise E. Atkinson, Elissa A. Hallem
{"title":"Editorial - Strongyloides research in the post-genomics era","authors":"Louise E. Atkinson,&nbsp;Elissa A. Hallem","doi":"10.1016/j.molbiopara.2022.111522","DOIUrl":"10.1016/j.molbiopara.2022.111522","url":null,"abstract":"","PeriodicalId":18721,"journal":{"name":"Molecular and biochemical parasitology","volume":"252 ","pages":"Article 111522"},"PeriodicalIF":1.5,"publicationDate":"2022-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10451264","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Profiling of metabolic alterations in mice infected with malaria parasites via high-resolution metabolomics 通过高分辨率代谢组学分析感染疟疾寄生虫小鼠的代谢改变
IF 1.5 4区 医学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-11-01 DOI: 10.1016/j.molbiopara.2022.111525
Jyoti Chhibber-Goel , Anurag Shukla , Dhanasekaran Shanmugam , Amit Sharma

Background

Malaria infection can result in distinct clinical outcomes from asymptomatic to severe. The association between patho-physiological changes and molecular changes in the host, and their correlation with severity of malaria progression is not fully understood.

Methods

In this study, we addressed mass spectrometry-based temporal profiling of serum metabolite levels from mice infected with Plasmodium berhgei (strain ANKA).

Results

We show global perturbations and identify changes in specific metabolites in correlation with disease progression. While metabolome-wide changes were apparent in late-stage malaria, a subset of metabolites exhibited highly correlated changes with disease progression. These metabolites changed early on following infection and either continued or maintained the change as mice developed severe disease. Some of these have the potential to be sentinel metabolites for severe malaria. Moreover, glycolytic metabolites, purine nucleotide precursors, tryptophan and its bioactive derivatives were many fold decreased in late-stage disease. Interestingly, uric acid, a metabolic waste reported to be elevated in severe human malaria, increased with disease progression, and subsequently appears to be detoxified into allantoin. This detoxification mechanism is absent in humans as they lack the enzyme uricase.

Conclusions

We have identified candidate marker metabolites that may be of relevance in the context of human malaria.

疟疾感染可导致从无症状到严重的不同临床结果。宿主的病理生理变化和分子变化之间的关系,以及它们与疟疾进展严重程度的关系尚不完全清楚。方法在本研究中,我们对感染白氏疟原虫(菌株ANKA)的小鼠血清代谢物水平进行了基于质谱的时间谱分析。结果我们发现了全局扰动,并确定了与疾病进展相关的特定代谢物的变化。虽然晚期疟疾中代谢组的变化很明显,但一组代谢物表现出与疾病进展高度相关的变化。这些代谢物在感染后早期发生变化,并在小鼠患上严重疾病时继续或保持这种变化。其中一些有可能成为严重疟疾的前哨代谢物。此外,糖酵解代谢产物、嘌呤核苷酸前体、色氨酸及其生物活性衍生物在晚期疾病中减少了许多倍。有趣的是,尿酸是一种代谢废物,据报道在严重的人类疟疾中升高,随着疾病的进展而增加,随后似乎被解毒为尿囊素。这种解毒机制在人类中是不存在的,因为他们缺乏尿酸酶。结论我们已经确定了可能与人类疟疾相关的候选标记代谢物。
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引用次数: 0
期刊
Molecular and biochemical parasitology
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