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From geranium lakes to catalysis with light 从天竺葵湖到光催化
IF 19.2 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-10-03 DOI: 10.1038/s41557-024-01636-4
Adam Noble
Adam Noble discusses the diverse uses of eosin Y over its 150-year history, from its origin as a dye and pigment used by post-impressionist masters to its versatile reactivity as a catalyst in visible light photochemistry.
亚当-诺贝尔(Adam Noble)讨论了曙红 Y 150 年来的多种用途,从其作为后印象派大师使用的染料和颜料的起源,到其作为可见光光化学催化剂的多功能反应性。
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引用次数: 0
Charting the ligandable proteome for stereoselective interactions 绘制立体选择性相互作用的可配体蛋白质组图
IF 19.2 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-10-01 DOI: 10.1038/s41557-024-01639-1
John Paul Pezacki, Eryn Lundrigan, Parrish Evers, Spencer Uguccioni
Determining the ligandability of the human proteome can provide key insights to characterize biological processes and promote drug discovery. Now, multi-tiered activity-based protein profiling provides comprehensive proteomic maps of chiral small-molecule interactions. Over 300 distinctive proteins were identified to ligand tryptoline acrylamides, including stereoselective and site-specific events.
确定人类蛋白质组的配体性可以为描述生物过程和促进药物发现提供重要的见解。现在,基于活性的多层次蛋白质分析提供了手性小分子相互作用的全面蛋白质组图谱。研究发现了 300 多种与胰肽丙烯酰胺配体的独特蛋白质,包括立体选择性和位点特异性事件。
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引用次数: 0
Abiotic anammox by a naturally occurring mineral 一种天然矿物质的非生物氨氧化作用
IF 19.2 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-09-30 DOI: 10.1038/s41557-024-01635-5
Shreya Ray Chaudhuri, Timothy H. Warren
The enzymatic conversion of NH4+ and NO2– to N2 catalysed by bacteria is critical to maintain nitrogen balance in the environment and for wastewater treatment. Now, a simple abiotic catalyst, the naturally occurring mineral, covellite, shows a remarkable mimicry for the entire reaction pathway.
由细菌催化的 NH4+ 和 NO2- 向 N2 的酶促转化对于维持环境中的氮平衡和废水处理至关重要。现在,一种简单的非生物催化剂--天然矿物柯韦石--对整个反应途径显示出了非凡的模仿能力。
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引用次数: 0
Integrated photochemical strategy for alkene synthesis from diverse substrates 从多种底物合成烯烃的综合光化学战略
IF 19.2 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-09-27 DOI: 10.1038/s41557-024-01643-5
Despite advances, a general olefination strategy for the direct conversion of carboxylic acids, alcohols and alkanes into alkenes remains challenging owing to their inherent differences in reactivity. Now, a one-pot photochemical method comprising a Giese addition followed by a Norrish type-II fragmentation enables the on-demand production of alkenes from diverse substrates.
尽管取得了一些进展,但由于羧酸、醇和烷烃的固有反应性不同,将它们直接转化为烯的通用烯化策略仍具有挑战性。现在,一种由 Giese 加成和 Norrish II 型破碎组成的单锅光化学方法可以按需从不同的底物中生产烯烃。
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引用次数: 0
Modular alkene synthesis from carboxylic acids, alcohols and alkanes via integrated photocatalysis 通过集成光催化技术从羧酸、醇和烷烃合成模块化烯烃
IF 19.2 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-09-27 DOI: 10.1038/s41557-024-01642-6
Hao Zeng, Ruize Yin, Yu Zhao, Jun-An Ma, Jie Wu
Alkenes serve as versatile building blocks in diverse organic transformations. Despite notable advancements in olefination methods, a general strategy for the direct conversion of carboxylic acids, alcohols and alkanes into alkenes remains a formidable challenge owing to their inherent reactivity disparities. Here we demonstrate an integrated photochemical strategy that facilitates a one-pot conversion of these fundamental building blocks into alkenes through a sequential C(sp3)–C(sp3) bond formation–fragmentation process, utilizing an easily accessible and recyclable phenyl vinyl ketone as the ‘olefination reagent’. This practical method not only offers an unparalleled paradigm for accessing value-added alkenes from abundant and inexpensive starting materials but also showcases its versatility through various complex scenarios, including late-stage on-demand olefination of multifunctional molecules, chain homologation of acids and concise syntheses of bioactive molecules. Moreover, initiating from carboxylic acids, alcohols and alkanes, this protocol presents a complementary approach to traditional olefination methods, making it a highly valuable addition to the research toolkit for alkene synthesis. The synthesis of alkenes from carboxylic acids, alcohols and alkanes is a formidable challenge owing to their inherent differences in reactivity. Now the one-pot conversion of these building blocks into alkenes is reported through an integrated photochemical strategy using a phenyl vinyl ketone as the olefination reagent.
在各种有机转化过程中,烯烃是用途广泛的构建基块。尽管烯化方法取得了显著进步,但由于羧酸、醇和烷固有的反应性差异,将它们直接转化为烯的通用策略仍然是一项艰巨的挑战。在这里,我们展示了一种综合光化学策略,利用一种容易获得且可回收的苯基乙烯基酮作为 "烯化试剂",通过一个顺序的 C(sp3)-C(sp3)键形成-断裂过程,促进这些基本构件向烯的一锅式转化。这种实用的方法不仅为从丰富而廉价的起始材料中获得高附加值烯烃提供了一个无与伦比的范例,而且还通过各种复杂的情况展示了其多功能性,包括多功能分子的后期按需烯化、酸链同源化和生物活性分子的简易合成。此外,该方案以羧酸、醇和烷烃为起始原料,是对传统烯烃化方法的一种补充,使其成为烯烃合成研究工具包中极具价值的补充。
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引用次数: 0
Enzymatic synthesis of azide by a promiscuous N-nitrosylase 杂合 N-亚硝基酶酶促合成叠氮化物
IF 19.2 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-09-27 DOI: 10.1038/s41557-024-01646-2
Antonio Del Rio Flores, Rui Zhai, David W. Kastner, Kaushik Seshadri, Siyue Yang, Kyle De Matias, Yuanbo Shen, Wenlong Cai, Maanasa Narayanamoorthy, Nicholas B. Do, Zhaoqiang Xue, Dunya Al Marzooqi, Heather J. Kulik, Wenjun Zhang
Azides are energy-rich compounds with diverse representation in a broad range of scientific disciplines, including material science, synthetic chemistry, pharmaceutical science and chemical biology. Despite ubiquitous usage of the azido group, the underlying biosynthetic pathways for its formation remain largely unknown. Here we report the characterization of an enzymatic route for de novo azide construction. We demonstrate that Tri17, a promiscuous ATP- and nitrite-dependent enzyme, catalyses organic azide synthesis through sequential N-nitrosation and dehydration of aryl hydrazines. Through biochemical, structural and computational analyses, we further propose a plausible molecular mechanism for azide synthesis that sets the stage for future biocatalytic applications and biosynthetic pathway engineering. Despite widespread use of azides across material science and various areas across chemistry, the underlying biosynthetic pathways for its formation have so far been unknown. Now, a promiscuous ATP-utilizing enzyme, Tri17, capable of synthesizing various azide molecules has been identified. Biochemical, structural and computational analyses support a potential molecular mechanism for azide formation by Tri17.
叠氮化物是一种富含能量的化合物,在材料科学、合成化学、制药科学和化学生物学等广泛的科学学科中具有不同的代表性。尽管叠氮基的使用无处不在,但其形成的基本生物合成途径在很大程度上仍然未知。在这里,我们报告了从头构建叠氮基的酶学途径的特征。我们证明 Tri17 是一种依赖 ATP 和亚硝酸盐的杂合酶,它通过芳基肼的 N-亚硝基化和脱水顺序催化有机叠氮化物的合成。通过生化、结构和计算分析,我们进一步提出了叠氮化物合成的合理分子机制,为未来的生物催化应用和生物合成途径工程奠定了基础。
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引用次数: 0
Biocatalytic asymmetric aldol addition into unactivated ketones 生物催化不对称醛醇加成到未活化酮中
IF 19.2 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-09-27 DOI: 10.1038/s41557-024-01647-1
Samantha K. Bruffy, Anthony Meza, Jordi Soler, Tyler J. Doyon, Seth H. Young, Jooyeon Lim, Kathryn G. Huseth, Patrick H. Willoughby, Marc Garcia-Borràs, Andrew R. Buller
Enzymes are renowned for their catalytic efficiency and selectivity, but many classical transformations in organic synthesis have no biocatalytic counterpart. Aldolases are prodigious C–C bond-forming enzymes, but their reactivity has only been extended past activated carbonyl electrophiles in special cases. To probe the mechanistic origins of this limitation, we use a pair of aldolases whose activity is dependent on pyridoxal phosphate. Our results reveal how aldolases are limited by kinetically favourable proton transfer with solvent, which undermines aldol addition into ketones. We show how a transaldolase can circumvent this limitation, enabling efficient addition into unactivated ketones. The resulting products are highly sought non-canonical amino acids with side chains that contain chiral tertiary alcohols. Mechanistic analysis reveals that transaldolase activity is an intrinsic feature of pyridoxal phosphate chemistry and identifies principles for extending aldolase catalysis beyond its previous limits to enable convergent, enantioselective C–C bond formation from simple starting materials. Aldolases have been a mainstay in synthesis, but their scope has been limited to activated electrophiles. Now carbon–carbon bond formation with ketone electrophiles is enabled by transaldolases, which form a strong nucleophile that is resistant to protonation. This chemistry enables convergent synthesis of non-canonical amino acids bearing tertiary alcohol side chains.
酶以其催化效率和选择性而闻名,但有机合成中的许多经典转化却没有相应的生物催化剂。醛醇酶是一种神奇的 C-C 键形成酶,但只有在特殊情况下,它们的反应活性才会超过活化的羰基亲电物。为了探究这种限制的机理根源,我们使用了一对活性依赖于磷酸吡哆醛的醛缩酶。我们的研究结果揭示了醛缩酶是如何受限于与溶剂之间在动力学上有利的质子转移,从而破坏了酮的醛加成作用。我们展示了一种反醛醇酶如何绕过这一限制,实现与未活化酮的高效加成。由此产生的产物是非常受欢迎的非典型氨基酸,其侧链含有手性叔醇。机理分析表明,反醛酶活性是磷酸吡哆醛化学的一个固有特征,并确定了扩展醛酶催化作用的原理,使其超越以往的限制,从而能够从简单的起始材料中形成会聚的、对映选择性的 C-C 键。
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引用次数: 0
Chemistry to hand 化学到手
IF 19.2 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-09-26 DOI: 10.1038/s41557-024-01651-5
Michelle Francl
Before the internet, chemists used references books to find necessary information. Michelle Francl takes us on a journey through the weird and wondrous world captured in the most famous reference book of them all, known to some as the ‘Rubber Bible’.
在互联网出现之前,化学家们使用参考书来查找必要的信息。米歇尔-弗朗克尔将带我们领略这本最著名的参考书(有人称之为 "橡胶圣经")所记录的奇异世界。
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引用次数: 0
Gold-catalysed amine synthesis by reductive hydroamination of alkynes with nitroarenes 通过炔烃与硝基烯烃的还原加氢反应进行金催化胺合成
IF 19.2 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-09-25 DOI: 10.1038/s41557-024-01624-8
Tongliang Zhou, Pengcheng Gao, Roger Lalancette, Roman Szostak, Michal Szostak
Amines are the most pivotal class of organic motifs in pharmaceutical compounds. Here we provide a blueprint for a general synthesis of amines by catalyst differentiation enabled by triple Au–H/Au+/Au–H relay catalysis. The parent catalyst is differentiated into a set of catalytically active species to enable triple cascade catalysis, where each catalytic species is specifically tuned for one catalytic cycle. This strategy enables the synthesis of biorelevant amine motifs by reductive hydroamination of alkynes with nitroarenes. Using this triple cascade approach, we have achieved exceptional functional group tolerance, enabling the use of bulk chemical feedstocks as coupling partners for the amination of both simple and complex alkynes (>100 examples), including those derived from pharmaceuticals, peptides and natural products (>30 examples). The isolation and full crystallographic characterization of gold hydride and hydride-bridged gold complexes has garnered insights into the catalyst differentiation process of fundamental organometallic gold hydride complexes. Amines are predominant motifs in pharmaceuticals, but complex amines are challenging to generate. Now, enabled by triple Au–H/Au+/Au–H relay catalysis, the synthesis of complex and structurally diverse amines by a direct reductive hydroamination of alkynes with nitroarenes is reported. Catalytic intermediates were isolated to elucidate the mechanism.
胺是医药化合物中最重要的一类有机基团。在此,我们提供了一个通过 Au-H/Au+/Au-H 三重级联催化实现催化剂分化的胺类化合物通用合成蓝图。母催化剂被分化成一组催化活性物种,从而实现三重级联催化,其中每个催化物种都针对一个催化循环进行了专门调整。这种策略可以通过炔烃与硝基烯烃的还原加氢反应合成与生物相关的胺基团。利用这种三重级联方法,我们实现了优异的官能团耐受性,能够使用大宗化学原料作为偶联剂,对简单和复杂的炔烃进行胺化(100 个实例),包括从药物、肽和天然产品中提取的炔烃(30 个实例)。氢化物金和氢化物桥接金络合物的分离和完整晶体学表征,使我们对基本有机金属氢化物金络合物的催化剂分化过程有了更深入的了解。
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引用次数: 0
Few-femtosecond electron transfer dynamics in photoionized donor–π–acceptor molecules 光离子化供体-π-受体分子中的几微秒电子转移动力学
IF 19.2 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-09-25 DOI: 10.1038/s41557-024-01620-y
Federico Vismarra, Francisco Fernández-Villoria, Daniele Mocci, Jesús González-Vázquez, Yingxuan Wu, Lorenzo Colaizzi, Fabian Holzmeier, Jorge Delgado, José Santos, Luis Bañares, Laura Carlini, Mattea Carmen Castrovilli, Paola Bolognesi, Robert Richter, Lorenzo Avaldi, Alicia Palacios, Matteo Lucchini, Maurizio Reduzzi, Rocío Borrego-Varillas, Nazario Martín, Fernando Martín, Mauro Nisoli
The exposure of molecules to attosecond extreme-ultraviolet (XUV) pulses offers a unique opportunity to study the early stages of coupled electron–nuclear dynamics in which the role played by the different degrees of freedom is beyond standard chemical intuition. We investigate, both experimentally and theoretically, the first steps of charge-transfer processes initiated by prompt ionization in prototype donor–π–acceptor molecules, namely nitroanilines. Time-resolved measurement of this process is performed by combining attosecond XUV-pump/few-femtosecond infrared-probe spectroscopy with advanced many-body quantum chemistry calculations. We show that a concerted nuclear and electronic motion drives electron transfer from the donor group on a sub-10-fs timescale. This is followed by a sub-30-fs relaxation process due to the probing of the continuously spreading nuclear wave packet in the excited electronic states of the molecular cation. These findings shed light on the role played by electron–nuclear coupling in donor–π–acceptor systems in response to photoionization. The first steps of charge transfer in molecules after their interaction with light occur on an ultrafast timescale. Now, by combining attosecond pump/few-femtosecond probe spectroscopy with quantum chemistry calculations, it has been shown that a concerted nuclear and electronic motion drives electron transfer in donor–π–acceptor molecules on a sub-10-fs timescale.
将分子暴露于阿秒极紫外(XUV)脉冲为研究电子-核耦合动力学的早期阶段提供了一个独特的机会,其中不同自由度所起的作用超出了标准的化学直觉。我们通过实验和理论研究了原型供体-π-受体分子(即硝基苯胺)中由迅速电离引发的电荷转移过程的第一步。通过将阿秒 XUV-泵/几飞秒红外探针光谱与先进的多体量子化学计算相结合,对这一过程进行了时间分辨测量。我们的研究表明,核运动和电子运动的协同作用促使电子在亚 10 fs 时间尺度上从供体基团转移。随后是一个低于 30 fs 的弛豫过程,这是由于探测了分子阳离子激发电子态中不断扩散的核波包。这些发现揭示了电子-核耦合在供体-π-受体系统中响应光离子化所起的作用。
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引用次数: 0
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Nature chemistry
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