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Dissecting the roles of EgHd3a genes in flower induction and development of oil palm (Elaeis guineensis). 分析EgHd3a基因在油棕花诱导发育中的作用。
IF 3.8 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-26 DOI: 10.1007/s11103-025-01614-5
Aqwin Polosoro, Wening Enggarini, Kusumawaty Kusumanegara, Roberdi Roberdi, Toto Hadiarto, M Miftahudin, S Suharsono, Ence Darmo Jaya Supena

The regulation of flowering is crucial for optimizing palm oil yield and ensuring adaptation to environmental conditions. This study investigates two FLOWERING LOCUS T (FT) homologs in oil palm (Elaeis guineensis), EgHd3a-1 and EgHd3a-2, to elucidate their roles in flowering induction and developmental processes. Quantitative PCR and GUS reporter assays in Arabidopsis thaliana revealed that EgHd3a-1 is predominantly expressed in reproductive tissues and vascular structures, functioning analogously to FT as a floral inducer. In contrast, EgHd3a-2 displayed broader expressions across both vegetative and reproductive tissues, particularly during early growth stages, suggesting a role in organ development rather than direct floral induction. Overexpression of EgHd3a-1 and EgHd3a-2 in A. thaliana resulted in distinct flowering phenotypes, with EgHd3a-1 mutants exhibiting accelerated flowering under long-day conditions. Promoter analysis of pEgHd3a-1 and pEgHd3a-2 identified unique cis-acting regulatory elements associated with tissue specificity and environmental responsiveness, reinforcing their complementary functions. These findings provide a molecular basis for targeted genetic modification of flowering time in oil palm, offering significant potential for accelerating breeding cycles, improving yields optimization, and enhancing resilience to environmental changes.

开花调节是优化棕榈油产量和确保适应环境条件的关键。本研究研究了油棕(Elaeis guineensis)开花位点T(开花位点T)的两个同源基因EgHd3a-1和EgHd3a-2,以阐明它们在开花诱导和发育过程中的作用。定量PCR和GUS报告基因分析表明,EgHd3a-1在拟南芥的生殖组织和维管结构中主要表达,其功能类似于FT,是一种花诱导剂。相比之下,EgHd3a-2在营养和生殖组织中都表现出更广泛的表达,特别是在生长早期,这表明它在器官发育中起作用,而不是直接诱导花。在拟南芥中过表达EgHd3a-1和EgHd3a-2导致不同的开花表型,EgHd3a-1突变体在长日照条件下表现出加速开花。pEgHd3a-1和pEgHd3a-2的启动子分析发现了与组织特异性和环境响应性相关的独特的顺式调控元件,增强了它们的互补功能。这些发现为油棕开花时间的靶向基因改造提供了分子基础,为加快育种周期、提高产量优化和增强对环境变化的适应能力提供了巨大的潜力。
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引用次数: 0
Not just a cycle: mitochondrial CsgabD is involved in GABA metabolism during citrus defense against biotic stress. 不仅仅是一个循环:在柑橘抵御生物压力的过程中,线粒体CsgabD参与GABA代谢。
IF 3.8 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-21 DOI: 10.1007/s11103-025-01673-8
Yasser Nehela, Nabil Killiny

While the role of succinic semialdehyde (SSA) dehydrogenase (SSADH; also known as gabD) is well-reported from model plants, the lack of functionality and structure of SSADH from citrus represents a significant knowledge gap. Herein, genome-wide analyses identified 17 high-confidence SSADH-like proteins from Citrus sinensis, among which three putative SSADHs have potential GABA dehydrogenase function. Sequence alignment, phylogenetic analyses, and domain architecture demonstrated high conservation among CsSSADHs (aka CsgabD) and their homologs across diverse plant taxa. Notably, CsSSADH-2 lacked a conserved QGIVC motif found in CsSSADH-1/-3. Secondary structure analyses indicated conserved aldehyde dehydrogenase domains. Homology-based 3D modeling predicted CsSSADH-1 and 2 as homo-tetramers; however, AlphaFold2-based modeling suggested their full-length monomer structures. PPI networks revealed CsSSADH-1 interacts with 10 proteins, primarily involved in GABA/succinate metabolism and the TCA cycle. Docking studies indicated that CsSSADH-1 displayed acceptable affinity and binding modes with GABA, SSA, and succinate. GABA supplementation enhances CsSSADH expression, GABA, and succinate content in a dose-dependent manner in both healthy and infected citrus plants under greenhouse conditions. CsSSADH was involved in citrus responses to 'Candidatus Liberibacter asiaticus' and/or its vector, Diaphorina citri. Nevertheless, GABA accumulation under biotic stress leads to condition-specific rerouting of GABA metabolism. Chemical inhibition of CsSSADH resulted in increased GABA accumulation but reduced succinate levels in both healthy and infected plants. This study offers the first comprehensive characterization of C. sinensis SSADH isoforms, providing insights into their evolutionary divergence, structural features, and potential functions, and enhancing our understanding of their possible roles in GABA metabolism and citrus defense responses.

虽然模式植物中琥珀半醛(SSA)脱氢酶(SSADH,也称为gabD)的作用已被广泛报道,但柑橘中缺乏SSADH的功能和结构,这代表了一个重大的知识空白。本文通过全基因组分析,鉴定出17个高可信度的柑橘ssadh样蛋白,其中3个推测的ssadh具有潜在的GABA脱氢酶功能。序列比对、系统发育分析和结构域结构分析表明,csssadh及其同源物在不同植物类群中具有高度的保守性。值得注意的是,CsSSADH-2缺乏在CsSSADH-1/-3中发现的保守的QGIVC基序。二级结构分析显示保守的醛脱氢酶结构域。基于同源性的三维建模预测CsSSADH-1和csssadh - 2为同源四聚体;然而,基于alphafold2的建模显示了它们的全长单体结构。PPI网络显示CsSSADH-1与10个蛋白相互作用,主要参与GABA/琥珀酸代谢和TCA循环。对接研究表明,CsSSADH-1与GABA、SSA和琥珀酸盐具有可接受的亲和力和结合模式。在温室条件下,在健康和受感染的柑橘植株中,补充GABA均以剂量依赖的方式增强CsSSADH表达、GABA和琥珀酸盐含量。CsSSADH参与柑橘对亚洲自由候选菌(Candidatus Liberibacter asiaticus)和/或其载体柑橘蚜(Diaphorina citri)的反应。然而,生物应激下GABA的积累导致GABA代谢的条件特异性重定向。CsSSADH的化学抑制导致GABA积累增加,但降低了健康和感染植株的琥珀酸水平。本研究首次全面表征了柑橘SSADH亚型,揭示了其进化分化、结构特征和潜在功能,并加深了对其在GABA代谢和柑橘防御反应中的可能作用的理解。
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引用次数: 0
Flowering time regulation: a critical review focusing on FKF1 protein. 花期调控:聚焦于FKF1蛋白的综述。
IF 3.8 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-21 DOI: 10.1007/s11103-025-01672-9
Ahmed Alabd, Juan Zhuo, Xinchun Lin
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引用次数: 0
Embracing AI in plant biology: a new era of discovery. 在植物生物学中拥抱人工智能:一个发现的新时代。
IF 3.8 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-21 DOI: 10.1007/s11103-025-01670-x
Dong Xu, Yuko Makita, Aalt Dirk Jan van Dijk
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引用次数: 0
Increased anthocyanin accumulation and plant growth by driving PAP1 expression using the 3'downstream region of the sulfate transporter SULTR2;1 gene. 利用硫酸盐转运体SULTR2的3'下游区域驱动PAP1表达,增加花青素积累和植物生长;1基因。
IF 3.8 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-21 DOI: 10.1007/s11103-025-01676-5
Nguyen Ha Trang, Abdul Wakilu Sulemana, Moeka Fujita, Li Hongqiao, Chihiro Ohtaki, Akiko Suyama, Akiko Maruyama-Nakashita
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引用次数: 0
MsCCoAOMTh3 confers drought tolerance by mediating lignin content and ROS scavenging. MsCCoAOMTh3通过介导木质素含量和活性氧清除来赋予抗旱性。
IF 3.8 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2026-01-10 DOI: 10.1007/s11103-025-01674-7
Shudi Huang, Fang Ma, Yunfei Liang, Jiaxin Wu, Zhiguo Xie, Xiangqiang Zhan, Yilin Cui, Zhichao Ma, Peizhi Yang

Caffeoyl-CoA O-methyltransferase (CCoAOMT) is a key enzyme in the phenylpropanoid pathway that plays a crucial role in lignin biosynthesis; however, its functional role in Medicago sativa remains poorly understood. In this study, we identified 44 MsCCoAOMT family members and analyzed their expression profiles across eight tissues and under polyethylene glycol (PEG)-induced osmotic stress. Among them, MsCCoAOMTh3 displayed preferential expression in roots and flowers, and was significantly upregulated in roots and stems following PEG treatment, suggesting a potential role in both plant development and stress responses. Functional validation through heterologous expression in Arabidopsis thaliana revealed that MsCCoAOMTh3 overexpression markedly increased lignin accumulation and promoted xylem development in roots. Furthermore, transgenic lines displayed enhanced drought tolerance, characterized by elevated antioxidant enzyme activity and reduced malondialdehyde (MDA) levels. Collectively, these findings suggest that MsCCoAOMTh3 acts as a positive regulator of root lignification and enhances drought tolerance by modulating both stress-responsive and lignin biosynthesis-related genes.

咖啡酰辅酶a o -甲基转移酶(CCoAOMT)是苯丙素途径的关键酶,在木质素生物合成中起重要作用;然而,其在紫花苜蓿中的功能作用仍然知之甚少。在这项研究中,我们鉴定了44个MsCCoAOMT家族成员,并分析了他们在聚乙二醇(PEG)诱导的渗透胁迫下在8个组织中的表达谱。其中,MsCCoAOMTh3在根和花中优先表达,在PEG处理后在根和茎中显著上调,提示其在植物发育和胁迫响应中均有潜在作用。通过拟南芥异源表达的功能验证表明,MsCCoAOMTh3过表达可显著增加木质素积累,促进根系木质部发育。此外,转基因品系表现出更强的抗旱性,其特征是抗氧化酶活性升高,丙二醛(MDA)水平降低。综上所述,这些发现表明MsCCoAOMTh3通过调节胁迫响应基因和木质素生物合成相关基因,作为根木质素化的积极调节因子,增强了根系的耐旱性。
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引用次数: 0
The evolution and developmental expression profile of the PIN-FORMED family in Setaria viridis. 狗尾草PIN-FORMED家族的进化和发育表达谱。
IF 3.8 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-12-24 DOI: 10.1007/s11103-025-01671-w
João Marcos Fernandes-Esteves, João Travassos-Lins, Juan David Ferreira Gomes, Marcio Alves-Ferreira

Auxin is one of the major driving forces of plant development and requires careful regulation of transporter proteins to establish polar auxin transport. The PIN-FORMED (PIN) family plays a pivotal role in plant development by establishing auxin gradients that govern vascular patterning and organogenesis. However, the PIN family remains severely underexplored in Setaria viridis, a well-established model for C4 monocots. In this study, we identified and characterized 13 PIN genes in the S. viridis genome. Phylogenetic and collinearity analyses revealed duplication events in the SvPIN1, SvPIN5 and SvPIN10 subfamilies. Structural analysis uncovered unique features, including potential pseudogenization of SvPIN5a. Expression profiling across five developmental stages unveiled the potential developmental roles of SvPINs, with SvPIN1 and SvPIN10 paralogues predominantly expressed in shoots and panicles, SvPIN2 and SvPIN9 in roots, while SvPIN5b showed leaf-enriched expression, suggesting potential involvement in leaf vascular development. Hormonal treatments in callus cultures revealed auxin-mediated upregulation of SvPIN1b, SvPIN2, SvPIN5d, SvPIN8 and SvPIN10a. Our findings provide significant insights into the role of PIN genes in S. viridis and other C4 monocots, establishing a foundation for future functional studies and offering potential targets for crop improvement through auxin transport manipulation.

生长素是植物发育的主要驱动力之一,需要仔细调节转运蛋白来建立生长素的极性转运。PIN- formed (PIN)家族通过建立生长素梯度来控制维管模式和器官发生,在植物发育中起着关键作用。然而,PIN家族在蛇尾草(Setaria viridis)中的研究仍然严重不足,蛇尾草是C4单子房的一个成熟模型。在本研究中,我们鉴定并鉴定了病毒链球菌基因组中的13个PIN基因。系统发育和共线性分析显示SvPIN1、SvPIN5和SvPIN10亚家族存在重复事件。结构分析揭示了独特的特征,包括潜在的SvPIN5a假原化。五个发育阶段的表达谱揭示了SvPINs的潜在发育作用,SvPIN1和SvPIN10亲本主要在茎和穗中表达,SvPIN2和SvPIN9在根中表达,而SvPIN5b在叶片中表达富集,表明可能参与叶片维管发育。在愈伤组织培养中,激素处理显示生长素介导的SvPIN1b、SvPIN2、SvPIN5d、SvPIN8和SvPIN10a表达上调。我们的研究结果为PIN基因在绿葡萄球菌和其他C4单子植物中的作用提供了重要的见解,为未来的功能研究奠定了基础,并为通过生长素转运操纵作物改良提供了潜在的靶点。
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引用次数: 0
Peanut annexin AhANN6 promotes heat resistance in plant and bacterial cells. 花生膜联蛋白AhANN6促进植物和细菌细胞的耐热性。
IF 3.8 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-12-23 DOI: 10.1007/s11103-025-01665-8
Lanlan Feng, Naoki Yamamoto, Yin Li

Thermal energy has become an increasingly severe environmental stressor to cash crop production worldwide because of global warming. Annexins, proteinaceous protectants against abiotic stress, are multifunctional proteins capable of peroxidase- and Ca2+-dependent and Ca2+-independent binding to or insertion into membranes. Annexins in plants belong to the annexin D family and are further clustered into six phylogenetic clades on the basis of their structural diversity. A previous study in peanut identified six annexins, but their thermotolerance functions remain unknown. In this study, we report that AhANN6, a peanut annexin, confers heat resistance in Escherichia coli and Arabidopsis when overexpressed. AhANN6 expression led to positive responses to drought stress, ABA supplementation, and heat stress in leaves and was developmentally regulated during germination and pegging. The AhANN6-YFP fusion protein was targeted to the plasma membrane of tobacco cells, suggesting that AhANN6 is localized in the cell membrane. AhANN6-overexpressing E. coli exhibited better growth under heat stress and oxidative stress, validating the molecular function of AhANN6 against abiotic stress. AhANN6-overexpressing Arabidopsis also presented increased heat resistance during vegetative growth. The decreased response of electrolyte leakage in the transgenic Arabidopsis to heat stress indicates potentially improved membrane stability as a result of AhANN6 overexpression. Additionally, the overexpression of AhANN6 in Arabidopsis led to increased expression of AtPOD and AtAPX, key enzyme-encoding genes involved in ROS scavenging, suggesting that AhANN6 is involved in maintaining ROS detoxification. Our findings suggest that AhANN6 plays a crucial role in protecting cell membrane integrity and promoting vegetative growth under adverse environmental stressors.

由于全球变暖,热能已成为全球经济作物生产日益严重的环境压力源。膜联蛋白是抗非生物胁迫的蛋白质保护剂,是一种多功能蛋白,能够过氧化物酶和Ca2+依赖性和Ca2+非依赖性结合或插入膜。植物中的膜联蛋白属于膜联蛋白D家族,根据其结构多样性可进一步分为6个系统发育支系。先前对花生的研究发现了六种膜联蛋白,但它们的耐热功能尚不清楚。在这项研究中,我们报道了花生膜联蛋白AhANN6在大肠杆菌和拟南芥中过表达时赋予耐热性。AhANN6的表达导致叶片对干旱胁迫、ABA补充和热胁迫的积极响应,并在萌发和贴枝过程中受到发育调控。AhANN6- yfp融合蛋白靶向烟草细胞质膜,表明AhANN6定位于细胞膜。过表达AhANN6的大肠杆菌在热应激和氧化应激下表现出更好的生长,验证了AhANN6抗非生物应激的分子功能。过表达ahann6的拟南芥在营养生长过程中也表现出更高的耐热性。在转基因拟南芥中,电解质泄漏对热胁迫的响应降低,表明AhANN6过表达可能提高了膜的稳定性。此外,AhANN6在拟南芥中的过表达导致参与清除ROS的关键酶编码基因AtPOD和AtAPX的表达增加,表明AhANN6参与维持ROS解毒。我们的研究结果表明,在不利环境胁迫下,AhANN6在保护细胞膜完整性和促进营养物质生长方面起着至关重要的作用。
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引用次数: 0
The heterotrimeric G protein γ3 subunit, RGG3/GS3, integrates sugar-starvation and hormone-responsive signaling pathways to promote coleoptile elongation during anaerobic germination in rice. 异三聚体G蛋白γ - 3亚基RGG3/GS3整合糖饥饿和激素应答信号通路,促进水稻厌氧萌发过程中胚芽鞘伸长。
IF 3.8 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-12-23 DOI: 10.1007/s11103-025-01667-6
Taichi Takashima, Hikaru Azumahara, Haru Hirano, Soshi Hirata, Mika Fukuda, Sagar Lamsal, Kotaro Miura, Yukimoto Iwasaki, Takeshi Fukao
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引用次数: 0
Navigating microplastic-induced stress in plants: adaptations from physiology to gene regulation. 在植物中导航微塑性诱导的胁迫:从生理学到基因调控的适应。
IF 3.8 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2025-12-23 DOI: 10.1007/s11103-025-01669-4
Necla Pehlivan, Yahya Terzi, Sedat Gündoğdu, Rafet Çağrı Öztürk, Kenan Gedik
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引用次数: 0
期刊
Plant Molecular Biology
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