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UPLC-Q-TOF-MS With Chemometrics Approach Analysis of Nonvolatile Compounds for Medicinal Citrus reticulata With Cultivar and Areas Variations. UPLC-Q-TOF-MS化学计量学方法分析药用网状柑橘品种和地区差异的非挥发性成分。
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-12-28 DOI: 10.1002/pca.3496
Fang-Qing Yang, Xiang-Mei Tan, Shan-Shan Chu, Min-Zhen Yin, Zhen-Yu Zhang, Hua-Sheng Peng

Introduction: Citri Reticulatae Pericarpium (CRP), also known as Chenpi in Chinese, is the dry mature peel of Citrus reticulata Blanco or its cultivated varieties. CRP as the health-care food and dietary supplement has been widely used in various diseases. The quality of CRP can be affected by various factors, which are closely related to the metabolite composition of CRP.

Objectives: The objective of this study is to conduct a comprehensive comparative analysis on the chemical profiling of 51 C. reticulata samples of eight medicinal varieties, grown in different areas, and provide a methodological reference for the study of pharmacodynamic material bases and quality control of C. reticulata.

Methodology: Initially, a comprehensive characterization was performed using quadrupole time-of-flight mass spectrometry (UPLC-Q-TOF-MS), and a heatmap visualization was employed for clarifying the distribution of the annotated active ingredients. Furthermore, obtained chemical profiles data were employed in multivariate statistical methods, comprising principal component analysis (PCA), and orthogonal partial least-squares-discrimination analysis (OPLS-DA).

Results: A total of 42 chemical components were annotated in positive ion mode. The relative contents were evident differences in the active ingredients of medicinal varieties of C. reticulata; mostly, polymethoxy flavones (PMFs) in C. reticulata "Dahongpao" were more abundant; among them, nobiletin and tangeretin are the main active ingredients in CRP. In addition, the relative contents of chemical constituents of C. reticulata "Dahongpao" and C. reticulata "Unshiu" from different areas were less variable. Compared with production origins, the varieties of C. reticulata had a greater impact on quality.

Conclusion: This work obtains a better understanding of the chemical profiles of medicinal varieties of C. reticulata, facilitated the reasonable applicability and quality control of medicinal varieties of C. reticulata.

柑橘网皮(Citri Reticulatae Pericarpium, CRP),又称陈皮,是柑橘(Citrus reticulata Blanco)或其栽培品种的干燥成熟果皮。CRP作为保健食品和膳食补充剂已广泛应用于各种疾病。CRP的质量受多种因素影响,这些因素与CRP的代谢物组成密切相关。目的:对不同产地的8个药用品种51份黄皮药材样品的化学特征进行综合比较分析,为黄皮药材药效物质基础研究和质量控制提供方法学参考。方法:首先,采用四极杆飞行时间质谱(UPLC-Q-TOF-MS)进行全面表征,并采用热图可视化来阐明所标注活性成分的分布。此外,获得的化学剖面数据采用多元统计方法,包括主成分分析(PCA)和正交偏最小二乘判别分析(OPLS-DA)。结果:共有42种化学成分被标注为正离子模式。不同药用品种间有效成分的相对含量差异明显;其中,“大红袍”中多甲氧基黄酮含量较高;其中,褐皮素和橘皮素是CRP的主要活性成分。此外,不同产地的“大红袍”和“云杉”的化学成分相对含量差异较小。与生产产地相比,品种对品质的影响更大。结论:本工作有助于更好地了解网麻药用品种的化学特征,为网麻药用品种的合理适用和质量控制提供依据。
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引用次数: 0
Integrating UPLC-MS/MS Bioinformatics and In Vivo Experiments Validation to Elucidate the Mechanism of Wenzi Jiedu Decoction in Suppressing Colorectal Cancer. 结合UPLC-MS/MS生物信息学和体内实验验证阐明文子解毒汤抑制结直肠癌的机制。
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-12-28 DOI: 10.1002/pca.3495
Tianqing Sang, Aoshengxiong Liang, Hongli Zhou, Wenli Qiu, Lijing Shi, Hongguang Zhou

Objectives: We used ultra-performance liquid chromatography tandem mass spectrometry (UPLC-MS/MS), bioinformatics, and in vivo experiments to study the anti-colorectal cancer (CRC) effects of Wenzi Jiedu Decoction (WJD).

Methods: Detected the main components of WJD by UPLC-MS/MS. Obtained WJD targets and CRC targets through the open source database. Analyzed the WJD-CRC targets from a macro perspective by PPI, GO, and KEGG analyses. Validated bioinformatics findings by molecular docking and animal experiments.

Results: This study obtained 91 active compounds and 240 targets of WJD. Intersection with CRC genes (GSE32323 388 DEGs, GSE 215510 1253 DEGs), 36 WJD-CRC common targets were obtained. PPI and enrichment analyses indicated WJD exerted anti-CRC effects mainly through the chemokine signaling pathway and apoptosis. Quercetin, Luteolin, Kaempferol, Formononetin, Stigmasterol, and Hederagenin were the main compounds of WJD. CXCL8, BCL-2, BAX, BCL2L1, CASP3, AKT1, and TP53 were the core targets of WJD-CRC. Bulk molecular docking showed that core WJD compounds had good docking activity with WJD-CRC targets. Animal experiments had shown the tumor inhibition rate of the WJD group was 36.53%. WJD could regulate the ratio of CD4+, CD8+, and CD4+/CD8+, reduce the expression of CXCL8, and BCL-2, and increase the expression of BAX.

Conclusions: This study indicated that the potential mechanism of WJD in the prevention and treatment of CRC had the characteristics of the multi-target, multi-path, and multi-system mechanisms, which were mainly related to the regulation of chemokines and the promotion of apoptosis.

目的:采用超高效液相色谱-串联质谱(UPLC-MS/MS)、生物信息学、体内实验等方法研究温子解毒汤的抗结直肠癌(CRC)作用。方法:采用超高效液相色谱-质谱联用法检测白参的主要成分。通过开源数据库获取WJD目标和CRC目标。通过PPI、GO和KEGG分析,从宏观角度分析WJD-CRC的靶点。通过分子对接和动物实验验证了生物信息学的发现。结果:共获得91个有效化合物和240个靶点。与CRC基因(GSE32323 388 DEGs, GSE 215510 1253 DEGs)交叉,获得36个WJD-CRC共同靶点。PPI和富集分析表明,WJD主要通过趋化因子信号通路和细胞凋亡发挥抗crc作用。槲皮素、木犀草素、山奈酚、刺芒柄花素、豆甾醇和Hederagenin是WJD的主要成分。CXCL8、BCL-2、BAX、BCL2L1、CASP3、AKT1、TP53是WJD-CRC的核心靶点。整体分子对接表明,核心WJD化合物与WJD- crc靶点具有良好的对接活性。动物实验表明,WJD组肿瘤抑制率为36.53%。WJD可调节CD4+、CD8+及CD4+/CD8+比值,降低CXCL8、BCL-2表达,提高BAX表达。结论:本研究提示WJD预防和治疗结直肠癌的潜在机制具有多靶点、多途径、多系统机制的特点,主要与趋化因子的调控和细胞凋亡的促进有关。
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引用次数: 0
Comparison of Plant Genomic DNA Extraction Kits Using the Proofman-LMTIA Amplification Assay. 使用Proofman-LMTIA扩增试验的植物基因组DNA提取试剂盒的比较。
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-12-28 DOI: 10.1002/pca.3497
Wei Yao, Yajie Wang, Dan Zhou, Jinxin Liu, Chunmei Song, Xiaohua Zhang, Deguo Wang, Yao Wang

Introduction: The extraction of DNA is the basis of molecular biology research. The quality of the extracted DNA is one of the key factors for the success of molecular biology experiments.

Objective: To select a suitable DNA extraction method for Chinese medicinal herbs and seeds.

Methods: In this experiment, four commercial DNA extraction kits were used to extract the genomic DNA (gDNA) from the Pinellia ternata (Thunb.) Breit. powder; Arisaema amurense Maxim. powder as well as the seeds of Glycine max (L.) Merr. On the one hand, the concentration and purity of DNA extracted by these four kits were compared. On the other hand, nucleic acid amplification experiments were performed on three samples extracted by each of the four kits by Proofman-LMTIA methods, which is a novel nucleic acid isothermal amplification technique. The concentration and purity of DNA extracted by different kits were used to determine which methods were suitable for the dry powder of Chinese herbal medicines and seeds. The efficiency of the amplification curve to show whether the extracted DNA can be used in nucleic acid amplification experiments.

Results: The results showed that the Proofman-LMTIA methods were of high specificity and the optimal reaction temperatures were 63, 59, and 59°C for P. ternata (Thunb.) Makino; A. amurense Maxim. and G. max (L.) Merr., respectively. The concentration and purity of the gDNAs extracted with all kits were within the acceptable ranges; meanwhile, the amplification of the gDNA extracted by Kit II was of the highest efficiency.

Conclusion: In this experiment, the principle, concentration, purity, and time taken for extracting DNA with four kits were compared. The automated extraction kit based on the magnetic method is suitable for extracting DNA from Chinese medicinal herbs and seeds. The extracted DNA is suitable for nucleic acid amplification detection.

DNA的提取是分子生物学研究的基础。提取DNA的质量是分子生物学实验成功与否的关键因素之一。目的:选择合适的中药材及其种子DNA提取方法。方法:本实验采用4种商用DNA提取试剂盒提取半夏(Pinellia ternata, Thunb)的基因组DNA (gDNA)。布莱特。粉;格言。甘氨酸(L.)的粉末和种子稳定。一方面比较了这四种试剂盒提取的DNA的浓度和纯度。另一方面,采用新型核酸等温扩增技术Proofman-LMTIA方法,对4种试剂盒各提取的3个样品进行核酸扩增实验。通过不同试剂盒提取DNA的浓度和纯度,确定适合中药材干粉和种子干粉提取的方法。扩增曲线的效率显示提取的DNA是否可以用于核酸扩增实验。结果:结果表明,Proofman-LMTIA方法特异性高,最佳反应温度分别为63℃、59℃和59℃。牧野;A.格言;G. max (L.)稳定。,分别。所有试剂盒提取的dna浓度和纯度均在可接受范围内;同时,Kit II提取的gDNA扩增效率最高。结论:本实验比较了四种试剂盒提取DNA的原理、浓度、纯度和所需时间。磁法自动提取试剂盒适用于中药材和种子DNA的提取。提取的DNA适合核酸扩增检测。
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引用次数: 0
Spatial Distribution and Comparative Analysis of Differential Metabolites in Curcuma longa L. Roots and Rhizomes Using UHPLC-Q-Orbitrap HRMS Combined With DESI-MSI. UHPLC-Q-Orbitrap结合DESI-MSI对姜黄根和根茎差异代谢物的空间分布及比较分析
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-12-26 DOI: 10.1002/pca.3493
Jin Wang, Ying Zhu, Chuyue Wu, Qinwan Huang

Introduction: The roots and rhizomes of Curcuma longa L. serve as distinct traditional Chinese medicines with varying therapeutic effects, likely attributed to differences in the accumulation and distribution of metabolites in these parts.

Objective: The study aims to investigate the differences and spatial distribution patterns of metabolites in C. longa L. roots and rhizomes.

Methods: Metabolite analysis of roots and rhizomes was conducted using ultra-high-performance liquid chromatography-quadruple orbitrap high-resolution mass spectrometry (UHPLC-Q-Orbitrap HRMS) combined with desorption electrospray ionization mass spectrometry imaging (DESI-MSI). Using principal component analysis (PCA) and orthogonal partial least squares discriminant analysis (OPLS-DA) to screen for differential metabolites. The relative contents of differential metabolites were visualized using heat maps. Additionally, the spatial distribution of differential metabolites was analyzed based on DESI-MSI.

Results: A total of 49 main chemical components were identified in roots and rhizomes using UHPLC-Q-Orbitrap HRMS. Through nontargeted metabolomics analysis combining UHPLC-Q-Orbitrap HRMS with PCA and OPLS-DA, 24 differential markers were identified; Additionally, using DESI-MSI alongside PCA and OPLS-DA, 18 differential markers were selected. Based on the DESI-MSI results, curcuminoids and sesquiterpenoids, including bisdemethoxycurcumin, demethoxycurcumin, furanodienone, furanogermenone, furanodiene, β-elemene, and curzerene, were more abundant in the rhizomes compared to the roots. And these differential compounds exhibited spatial distribution differences in the epidermis, phloem, and xylem between the roots and rhizomes.

Conclusion: The metabolomics analysis using UHPLC-Q-Orbitrap HRMS combined with DESI-MSI suggest differences in the accumulation and spatial distribution of metabolites in C. longa L. roots and rhizomes, possibly related to the biosynthesis of secondary metabolites.

姜黄的根和根茎是不同的中药,治疗效果不同,可能与这些部位代谢物的积累和分布不同有关。目的:研究龙葵根、根茎代谢产物的差异及空间分布规律。方法:采用超高效液相色谱-四重轨道阱高分辨率质谱法(UHPLC-Q-Orbitrap HRMS)结合解吸电喷雾质谱法(DESI-MSI)对根和根茎进行代谢物分析。采用主成分分析(PCA)和正交偏最小二乘判别分析(OPLS-DA)筛选差异代谢物。用热图显示不同代谢物的相对含量。此外,基于DESI-MSI分析了差异代谢物的空间分布。结果:采用UHPLC-Q-Orbitrap高效液相色谱法,从根和根茎中鉴定出49种主要化学成分。通过UHPLC-Q-Orbitrap HRMS联合PCA和OPLS-DA进行非靶向代谢组学分析,鉴定出24个差异标志物;此外,将DESI-MSI与PCA和OPLS-DA结合使用,选择了18个差异标记。根据DESI-MSI结果,姜黄素和倍半萜类物质,包括双去甲氧基姜黄素、去甲氧基姜黄素、呋喃二烯酮、呋喃二烯酮、呋喃二烯、β-榄香烯和莪术烯,在根茎中的含量高于根。这些差异化合物在根和根的表皮、韧皮部和木质部表现出空间分布上的差异。结论:利用UHPLC-Q-Orbitrap HRMS结合DESI-MSI进行代谢组学分析,发现龙骨根和根茎中代谢物的积累和空间分布存在差异,可能与次生代谢物的生物合成有关。
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引用次数: 0
Paper-Based Device for Phenolic Content Determination in Tea Extracts. 纸基茶叶提取物酚含量测定装置。
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-12-26 DOI: 10.1002/pca.3494
Rachma Athaya Silver, Eka Noviana, Muhammad Al-Fatih Ash Shiddiq, Nur Kumala Wardani, Anjar Windarsih, Fauzian Sekar Indrasyah, Nanang Fakhrudin, Anastasia Wheni Indrianingsih, Charles S Henry

Introduction: Phenolic compounds garner interest in developing medicines, nutraceuticals, and cosmeceuticals based on natural products. The quantity of phenolic compounds in a sample is commonly determined via spectrophotometry; however, this instrumented technique is relatively laborious and time consuming and requires a large amount of reagents.

Objective: This work aimed to develop a simple, point-of-need colorimetric sensor to rapidly determine total phenolic content (TPC) in tea extracts.

Methodology: We developed a radial paper-based analytical device (PAD) for TPC determination based on the established colorimetric reaction between the Folin-Ciocâlteu reagent and phenols. The PAD was designed to enable quantitative (with image capturing device and color processing software) and semiquantitative (using a color palette reference card) determinations. Analytical performance and stability of the PAD were evaluated based on the color responses.

Results: The PAD was successfully applied for the determination of phenolics in tea extracts obtained using several polar protic solvents, including water, methanol, and ethanol, with satisfactory accuracy (recovery of 95.5%-104%, 110%-116%, and 104%-110%, respectively) and precision (RSD < 9%). The obtained TPC values also agreed with those from visible spectrophotometry. Semiquantitative determination using the color reference card with three categories of TPC level (i.e., 0-100, 100-500, and 500-1000 mg gallic acid equivalent/L) provided > 95% accuracy. The devices were the most stable when stored at 4°C in a light-protected, vacuum-sealed container. The proposed PAD is promising for simple, rapid (~10-20 min), and accurate estimation of TPC in plant extracts.

酚类化合物在开发基于天然产物的药物、营养保健品和药妆品方面引起了人们的兴趣。样品中酚类化合物的含量通常通过分光光度法测定;然而,这种仪器技术相对费力,耗时,需要大量的试剂。目的:建立一种简便、快速测定茶叶提取物中总酚含量的比色传感器。方法:基于福林-环烷基磺酸(folin - ciocalteu)试剂与酚类物质的比色反应,建立了一种径向纸基分析装置(PAD)。PAD设计用于定量(使用图像捕获设备和颜色处理软件)和半定量(使用调色板参考卡)测定。根据颜色反应评价了PAD的分析性能和稳定性。结果:PAD可用于水、甲醇、乙醇等极性质子溶剂茶叶提取物中酚类物质的测定,准确度(回收率分别为95.5% ~ 104%、110% ~ 116%、104% ~ 110%)和精密度(RSD准确度为95%)均较好。这些器件在4°C的光保护真空密封容器中保存时最稳定。该方法具有简便、快速(~10 ~ 20 min)、准确测定植物提取物中TPC的优点。
{"title":"Paper-Based Device for Phenolic Content Determination in Tea Extracts.","authors":"Rachma Athaya Silver, Eka Noviana, Muhammad Al-Fatih Ash Shiddiq, Nur Kumala Wardani, Anjar Windarsih, Fauzian Sekar Indrasyah, Nanang Fakhrudin, Anastasia Wheni Indrianingsih, Charles S Henry","doi":"10.1002/pca.3494","DOIUrl":"https://doi.org/10.1002/pca.3494","url":null,"abstract":"<p><strong>Introduction: </strong>Phenolic compounds garner interest in developing medicines, nutraceuticals, and cosmeceuticals based on natural products. The quantity of phenolic compounds in a sample is commonly determined via spectrophotometry; however, this instrumented technique is relatively laborious and time consuming and requires a large amount of reagents.</p><p><strong>Objective: </strong>This work aimed to develop a simple, point-of-need colorimetric sensor to rapidly determine total phenolic content (TPC) in tea extracts.</p><p><strong>Methodology: </strong>We developed a radial paper-based analytical device (PAD) for TPC determination based on the established colorimetric reaction between the Folin-Ciocâlteu reagent and phenols. The PAD was designed to enable quantitative (with image capturing device and color processing software) and semiquantitative (using a color palette reference card) determinations. Analytical performance and stability of the PAD were evaluated based on the color responses.</p><p><strong>Results: </strong>The PAD was successfully applied for the determination of phenolics in tea extracts obtained using several polar protic solvents, including water, methanol, and ethanol, with satisfactory accuracy (recovery of 95.5%-104%, 110%-116%, and 104%-110%, respectively) and precision (RSD < 9%). The obtained TPC values also agreed with those from visible spectrophotometry. Semiquantitative determination using the color reference card with three categories of TPC level (i.e., 0-100, 100-500, and 500-1000 mg gallic acid equivalent/L) provided > 95% accuracy. The devices were the most stable when stored at 4°C in a light-protected, vacuum-sealed container. The proposed PAD is promising for simple, rapid (~10-20 min), and accurate estimation of TPC in plant extracts.</p>","PeriodicalId":20095,"journal":{"name":"Phytochemical Analysis","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2024-12-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142895726","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Isomer Differentiation by UHPLC-Q-Exactive-Orbitrap MS led to Enhanced Identification of Daphnane Diterpenoids in Daphne tangutica. 采用uhplc - q - extive - orbitrap MS进行异构体分化,提高了丹古拉中达芙妮二萜类化合物的鉴定水平。
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-12-19 DOI: 10.1002/pca.3491
Kouharu Otsuki, Mi Zhang, Lingjian Tan, Masayoshi Komaki, Akane Shimada, Takashi Kikuchi, Di Zhou, Ning Li, Wei Li

Introduction: Liquid chromatography-mass spectrometry (LC-MS) has enhanced the rapid, accurate analysis of complex plant extracts, eliminating the need for extensive isolation. Tandem mass spectrometry (MS/MS) further enhances this process by providing detailed structural information. However, differentiating structural isomers remains a challenge due to their minor spectral and structural differences.

Objective: This study aimed to extend the applicability of LC-MS/MS for the structural identification of daphnane diterpenoids, with a particular focus on distinguishing functional isomers.

Methods: LC-MS analyses were performed using an UHPLC-Q-Exactive-Orbitrap MS. The MS conditions for distinguishing isomers were optimized using in-source CID and HCD modes with reference compounds. A qualitative analysis was then conducted on the extract of Daphne tangutica. The chemical structures of the detected daphnane diterpenoids were estimated by analyzing the fragmentation patterns in both the mass spectra and product ion spectra. These identifications were further validated by isolation and comparison with an in-house daphnane diterpenoid library.

Results: By optimizing MS conditions, especially in the negative ion mode, it was possible to accurately distinguish structural isomers such as yuanhuajine and gniditrin. Qualitative analysis of D. tangutica identified a total of 28 daphnanes, including seven previously unreported compounds. Furthermore, a novel geometric isomer of gniditrin was isolated by conducting isolation on the crude diterpenoid fraction.

Conclusion: This study demonstrated that LC-MS/MS analysis can effectively distinguish functional isomers of daphnane diterpenoids, thereby enhancing the identification of daphnanes in plant extracts and highlighting its potential as a powerful tool for phytochemical analysis.

液相色谱-质谱(LC-MS)增强了复杂植物提取物的快速、准确分析,消除了广泛分离的需要。串联质谱(MS/MS)通过提供详细的结构信息进一步增强了这一过程。然而,由于其微小的光谱和结构差异,区分结构异构体仍然是一个挑战。目的:本研究旨在扩展LC-MS/MS在水蚤二萜类化合物结构鉴定中的适用性,特别是在区分功能异构体方面。方法:采用UHPLC-Q-Exactive-Orbitrap质谱联用仪进行质谱分析,以参比化合物为对照物,采用内源CID模式和HCD模式优化质谱分离条件。然后对丹参花提取物进行定性分析。通过质谱和生成物离子谱的破碎模式分析了所检测到的萘烷二萜类化合物的化学结构。这些鉴定通过分离和与内部的daphnane二萜文库进行比较进一步验证。结果:通过优化质谱条件,特别是在负离子模式下,可以准确区分元花津和尼地特林等结构异构体。质化分析鉴定出28种达芙妮类化合物,包括7种未见报道的化合物。此外,通过对粗二萜馏分的分离,分离得到了一种新的gniditrin几何异构体。结论:本研究表明LC-MS/MS分析方法可以有效区分水蚤烷二萜的功能异构体,从而提高了对植物提取物中水蚤烷的鉴定,并突出了其作为植物化学分析的有力工具的潜力。
{"title":"Isomer Differentiation by UHPLC-Q-Exactive-Orbitrap MS led to Enhanced Identification of Daphnane Diterpenoids in Daphne tangutica.","authors":"Kouharu Otsuki, Mi Zhang, Lingjian Tan, Masayoshi Komaki, Akane Shimada, Takashi Kikuchi, Di Zhou, Ning Li, Wei Li","doi":"10.1002/pca.3491","DOIUrl":"https://doi.org/10.1002/pca.3491","url":null,"abstract":"<p><strong>Introduction: </strong>Liquid chromatography-mass spectrometry (LC-MS) has enhanced the rapid, accurate analysis of complex plant extracts, eliminating the need for extensive isolation. Tandem mass spectrometry (MS/MS) further enhances this process by providing detailed structural information. However, differentiating structural isomers remains a challenge due to their minor spectral and structural differences.</p><p><strong>Objective: </strong>This study aimed to extend the applicability of LC-MS/MS for the structural identification of daphnane diterpenoids, with a particular focus on distinguishing functional isomers.</p><p><strong>Methods: </strong>LC-MS analyses were performed using an UHPLC-Q-Exactive-Orbitrap MS. The MS conditions for distinguishing isomers were optimized using in-source CID and HCD modes with reference compounds. A qualitative analysis was then conducted on the extract of Daphne tangutica. The chemical structures of the detected daphnane diterpenoids were estimated by analyzing the fragmentation patterns in both the mass spectra and product ion spectra. These identifications were further validated by isolation and comparison with an in-house daphnane diterpenoid library.</p><p><strong>Results: </strong>By optimizing MS conditions, especially in the negative ion mode, it was possible to accurately distinguish structural isomers such as yuanhuajine and gniditrin. Qualitative analysis of D. tangutica identified a total of 28 daphnanes, including seven previously unreported compounds. Furthermore, a novel geometric isomer of gniditrin was isolated by conducting isolation on the crude diterpenoid fraction.</p><p><strong>Conclusion: </strong>This study demonstrated that LC-MS/MS analysis can effectively distinguish functional isomers of daphnane diterpenoids, thereby enhancing the identification of daphnanes in plant extracts and highlighting its potential as a powerful tool for phytochemical analysis.</p>","PeriodicalId":20095,"journal":{"name":"Phytochemical Analysis","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2024-12-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142855059","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Quality Markers of Fufang Shenqi Oral Liquid Based on Integrated Fingerprint Analysis, Chemical Pattern Recognition, and Quantification. 基于指纹分析、化学模式识别和定量分析的扶芳神气口服液质量标记。
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-12-18 DOI: 10.1002/pca.3489
Yingqi Zhang, Yangling Li, Yanwei Cheng, Huiling Nan, Yuqiang Wu, Hongtao Chen, Xuejian Li, Yudong Luo, Anqiang Tan, Qing Chen

Introduction: Fufang Shenqi Oral Liquid (FFSQOL) is an important Chinese medicine compound preparation with a wide range of clinical applications, which is mainly used to regulate immune function, improve cardiovascular function, and have anti-inflammatory and antibacterial effects. At present, it is of great importance to establish the quality evaluation method of FFSQOL and to investigate its quality markers (Q-markers).

Objectives: The aim of this study is to establish a quality evaluation method for FFSQOL and screen its Q-markers to provide a scientific basis for its quality control.

Methods: Fourteen batches of FFSQOL were subjected to high-performance liquid chromatography (HPLC) fingerprint and similarity analysis. The components of FFSQOL were identified, and their content was determined. This was combined with cluster analysis (CA) and principal component analysis (PCA) to determine the Q-markers of FFSQOL.

Results: In this study, an HPLC fingerprint was established for 14 batches of FFSQOL, identifying 12 common peaks and six major components. Four components were identified as stable and reproducible: gallic acid (504.94 ~ 1219.04 μg/mL), caffeic acid (452.15 ~ 783.01 μg/mL), 7-O-glucoside (1097.72 ~ 2440.41 μg/mL), and formononetin (176.2 ~ 177.51 μg/mL). Quality evaluation of the 14 batches was conducted using chemical pattern recognition analysis. CA results indicated two distinct groups, and PCA revealed that principal components 1 and 2 were the main factors influencing batch differences. A combination of HPLC fingerprint, content determination results, and chemical pattern recognition analysis was employed to identify Q-markers for FFSQOL. The markers identified were gallic acid, caffeic acid, calycosin 7-O-glucoside, and formononetin.

Conclusion: In this study, a quality evaluation method for FFSQOL was established through the implementation of fingerprint, content determination, and chemical pattern recognition analysis, resulting in the identification of four Q-Markers of FFSQOL, which laid the foundation for the formulation of FFSQOL quality standards.

简介:复方参芪口服液(FFSQOL)是一种重要的中药复方制剂,临床应用广泛,主要用于调节免疫功能,改善心血管功能,具有抗炎、抗菌作用。目前,建立FFSQOL的质量评价方法,研究其质量标记(q -marker)具有重要意义。前言:目的:建立白芪散的质量评价方法,筛选其q标记物,为其质量控制提供科学依据。方法:对14批药材进行高效液相色谱指纹图谱和相似度分析。对其成分进行鉴定,并测定其含量。结合聚类分析(CA)和主成分分析(PCA)确定FFSQOL的q标记。结果:本研究建立了14批白藜芦醇的HPLC指纹图谱,鉴定了12个共同峰和6个主要成分。结果表明:没食子酸(504.94 ~ 1219.04 μg/mL)、咖啡酸(452.15 ~ 783.01 μg/mL)、7- o -葡萄糖苷(1097.72 ~ 2440.41 μg/mL)、刺芒柄花素(176.2 ~ 177.51 μg/mL)具有稳定的重复性。采用化学模式识别法对14批样品进行质量评价。主成分分析表明,主成分1和主成分2是影响批次差异的主要因素。采用HPLC指纹图谱、含量测定结果和化学模式识别分析相结合的方法,对FFSQOL进行q标记鉴定。鉴定的标记物为没食子酸、咖啡酸、毛蕊花素7- o -葡萄糖苷和刺芒柄花素。结论:本研究通过实施指纹图谱、含量测定、化学模式识别分析,建立了一套FFSQOL的质量评价方法,鉴定出了FFSQOL的4个q标记,为制定FFSQOL质量标准奠定了基础。
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引用次数: 0
HPLC Fingerprint Combined With Chemometrics and Multicomponent Content Determination for Quality Evaluation and Control of Huangma Tincture. HPLC指纹图谱联合化学计量学及多组分含量测定用于黄麻酊质量评价与控制。
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-12-10 DOI: 10.1002/pca.3487
Jing Qiu, Jie Li, Si-Yang Shang, Peng Zhou, Jing Leng

Introduction: Huangma Tincture (HMT) is a Chinese patent medicine with a history of clinical use for more than 60 years, widely used for treating dermal chronic ulcer such as diabetic foot ulcer. However, the overall quality evaluation and control method of HMT has not yet been researched.

Objective: The aim of this study is to establish a comprehensive quality evaluation and control method for HMT based on high-performance liquid chromatography (HPLC) fingerprint, chemometrics, and multicomponent content determination.

Methods: Establishing chemical fingerprint of HMT and carrying out similarity analysis comprehensively reflect the consistency of the formulation in terms of chemical composition. Chemometrics analyses, including hierarchical cluster analysis (HCA), principal component analysis (PCA), and orthogonal partial least squares-discriminant analysis (OPLS-DA), were performed to identify components crucial to quality differences. The content of five potential bioactive ingredients (brucine, strychnine, jatrorrhizine, coptisine, and berberine hydrochloride) was determined as a supplementary quality control measure.

Results: HPLC fingerprint of HMT with similarity index > 0.990 was established, in which five common compounds (brucine, strychnine, jatrorrhizine, coptisine, and berberine hydrochloride) were identified. HCA, PCA, and OPLS-DA results, validated through 200 permutation tests, were basically consistent. The contents of brucine, strychnine, jatrorrhizine, coptisine, and berberine hydrochloride in 20 batches of HMT samples were 0.2088-0.5556, 0.2599-0.9868, 0.1358-0.2092, 0.2634-0.6843, and 1.8301-2.7826 mg/mL, respectively.

Conclusion: HPLC fingerprint combined with chemometrics and multicomponent content determination considering both effect and toxicity provides a robust method for the comprehensive quality evaluation and control of HMT.

黄麻酊(HMT)是一种具有60多年临床使用历史的中成药,广泛用于治疗糖尿病足溃疡等皮肤慢性溃疡。然而,HMT的整体质量评价和控制方法尚未得到研究。目的:建立基于高效液相色谱(HPLC)指纹图谱、化学计量学和多组分含量测定的药材药材质量综合评价与控制方法。方法:建立HMT化学指纹图谱,进行相似度分析,综合反映制剂在化学成分上的一致性。化学计量学分析包括层次聚类分析(HCA)、主成分分析(PCA)和正交偏最小二乘判别分析(OPLS-DA),以确定影响质量差异的关键成分。测定五种潜在生物活性成分(马钱子碱、士的宁、麻风根碱、黄连碱和盐酸小檗碱)的含量作为补充质量控制措施。结果:建立了相似指数为> 0.990的HMT HPLC指纹图谱,其中鉴定出了马钱子碱、士的宁、麻黄碱、黄连碱、盐酸小檗碱5个常见化合物。通过200次排列试验验证的HCA、PCA和OPLS-DA结果基本一致。20批HMT样品中马钱子碱、士的宁、麻风根碱、黄连碱和盐酸小檗碱的含量分别为0.2088 ~ 0.5556、0.2599 ~ 0.9868、0.1358 ~ 0.2092、0.2634 ~ 0.6843和1.8301 ~ 2.7826 mg/mL。结论:高效液相色谱指纹图谱结合化学计量学和多组分含量测定,综合考虑药效和毒性,为药材药材的综合质量评价和控制提供了可靠的方法。
{"title":"HPLC Fingerprint Combined With Chemometrics and Multicomponent Content Determination for Quality Evaluation and Control of Huangma Tincture.","authors":"Jing Qiu, Jie Li, Si-Yang Shang, Peng Zhou, Jing Leng","doi":"10.1002/pca.3487","DOIUrl":"https://doi.org/10.1002/pca.3487","url":null,"abstract":"<p><strong>Introduction: </strong>Huangma Tincture (HMT) is a Chinese patent medicine with a history of clinical use for more than 60 years, widely used for treating dermal chronic ulcer such as diabetic foot ulcer. However, the overall quality evaluation and control method of HMT has not yet been researched.</p><p><strong>Objective: </strong>The aim of this study is to establish a comprehensive quality evaluation and control method for HMT based on high-performance liquid chromatography (HPLC) fingerprint, chemometrics, and multicomponent content determination.</p><p><strong>Methods: </strong>Establishing chemical fingerprint of HMT and carrying out similarity analysis comprehensively reflect the consistency of the formulation in terms of chemical composition. Chemometrics analyses, including hierarchical cluster analysis (HCA), principal component analysis (PCA), and orthogonal partial least squares-discriminant analysis (OPLS-DA), were performed to identify components crucial to quality differences. The content of five potential bioactive ingredients (brucine, strychnine, jatrorrhizine, coptisine, and berberine hydrochloride) was determined as a supplementary quality control measure.</p><p><strong>Results: </strong>HPLC fingerprint of HMT with similarity index > 0.990 was established, in which five common compounds (brucine, strychnine, jatrorrhizine, coptisine, and berberine hydrochloride) were identified. HCA, PCA, and OPLS-DA results, validated through 200 permutation tests, were basically consistent. The contents of brucine, strychnine, jatrorrhizine, coptisine, and berberine hydrochloride in 20 batches of HMT samples were 0.2088-0.5556, 0.2599-0.9868, 0.1358-0.2092, 0.2634-0.6843, and 1.8301-2.7826 mg/mL, respectively.</p><p><strong>Conclusion: </strong>HPLC fingerprint combined with chemometrics and multicomponent content determination considering both effect and toxicity provides a robust method for the comprehensive quality evaluation and control of HMT.</p>","PeriodicalId":20095,"journal":{"name":"Phytochemical Analysis","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2024-12-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142807779","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The Multifaceted Applications of Seaweed and Its Derived Compounds in Biomedicine and Nutraceuticals: A Promising Resource for Future. 海藻及其衍生化合物在生物医药和营养药品中的多方面应用:一种前景广阔的资源。
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-12-10 DOI: 10.1002/pca.3482
Zeeshan Hyderi, Arunachalam Kannappan, Arumugam Veera Ravi

The increasing demand for global food resources and over-dependence on terrestrial agroecosystems pose a significant challenge to the sustainable production of food commodities. Macroalgae are an essential source of food production in the marine environment, and their cultivation is a promising approach to alleviate the impending global food insecurity due to key factors, such as independence from terrestrial agriculture, rapid growth rate, unique biochemical composition, and carbon capture potential. Moreover, in many countries, seaweed has been used as food for decades because of its health and nutritional benefits. Seaweed contains bioactive components that are beneficial against various pathological conditions, including cancer, type 2 diabetes, and neurological disorders. Furthermore, the natural products derived from macroalgae have also been found to have immunostimulatory and antimicrobial properties. Macroalgae are also a significant source of rare sugars such as L-fucose, L-rhamnose, and glucuronic acid. Besides sugars, other bioactive components have been widely reported for their potential in cosmeceuticals. We have outlined the nutrient composition and functional properties of different species of macroalgae, with an emphasis on their potential as value-added products to the functional food market. Beyond being nutritional powerhouses, the variety of biological activities in human health and biomedicine makes them excellent candidates for developing novel drugs. Therefore, this review summarizes the pharmaceutical applications of macroalgae and suggests potential strategies for incorporating macroalgae-derived bioactive compounds into therapeutic products.

对全球粮食资源日益增长的需求和对陆地农业生态系统的过度依赖对粮食商品的可持续生产构成了重大挑战。大型藻类是海洋环境中重要的粮食生产来源,由于其独立于陆地农业、生长速度快、独特的生化成分和碳捕获潜力等关键因素,其种植是缓解迫在眉睫的全球粮食不安全的一种有希望的方法。此外,在许多国家,由于其健康和营养价值,海藻已经被用作食物几十年了。海藻含有生物活性成分,对各种病理状况有益,包括癌症、2型糖尿病和神经系统疾病。此外,从巨藻中提取的天然产物也被发现具有免疫刺激和抗菌特性。大型藻类也是稀有糖的重要来源,如L-焦糖、L-鼠李糖和葡萄糖醛酸。除糖外,其他生物活性成分在药妆中的潜力也被广泛报道。我们概述了不同种类的大型藻类的营养成分和功能特性,重点介绍了它们作为功能食品市场的增值产品的潜力。除了营养丰富之外,它们在人类健康和生物医学方面的各种生物活性使它们成为开发新药的绝佳候选者。因此,本文综述了巨藻的药物应用,并提出了将巨藻衍生的生物活性化合物纳入治疗产品的潜在策略。
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引用次数: 0
Comparison of Pressurized Water Extraction With Ultrasound Assisted Extraction for Isolation of Phycobiliproteins From Arthrospira platensis (Spirulina). 加压水萃取与超声辅助萃取分离平螺旋藻藻胆蛋白的比较。
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-12-10 DOI: 10.1002/pca.3486
Lenka Burdějová, Pavlína Dadajová, Barbora Kudláčková, Filip Duša

Introduction: Cyanobacterium Arthrospira platensis (AP) (Nordstedt) Gomont contains high content of phycobiliproteins (PBP), which are an important source for food industry. Methods effectively extracting proteins contained in AP cells are demanded to provide a supply of the material. Water-based extraction methods are advisable due to the high solubility of the PBP.

Objectives: Extraction techniques such as ultrasound assisted extraction (UAE) and pressurized water extraction (PWE) are popular due to their environmental friendliness, better extraction efficiency, and faster extraction process. In this paper, efficiency of the two methods is compared.

Materials and methods: PWE along with UAE is utilized for release of PBP from the AP cells. The extraction parameters including time, temperature, pressure, and ultrasound intensity are tested to obtain the most efficient setup. The methods were evaluated using sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE), and the replicates of PWE extracts were further analyzed by capillary isoelectric focusing with laser-induced fluorescence (cIEF-LIF).

Results: The developed PWE method using higher pressure treatment at lower temperature was significantly faster than UAE methods, and the SDS-PAGE results showed a high content of phycobiliproteins in the extracts. cIEF-LIF analysis showed that the sequential PWE of individual samples was repeatable, and the mild extraction provided a fluorescent profile similar to the commercially available C-phycocyanin standard.

Conclusion: Pressurized water extraction was shown to be an efficient, rapid, and well-automated extraction method for AP proteins in general, including bioactive phycobiliproteins. Obtained results encourage the use of PWE in small-scale analytical applications for primary extraction of proteins.

摘要蓝藻Arthrospira platensis (AP) (Nordstedt) Gomont含有高含量的藻胆蛋白(PBP),是食品工业的重要来源。需要有效提取AP细胞中所含蛋白质的方法来提供材料的供应。由于PBP的高溶解度,水基提取方法是可取的。目的:超声辅助提取(UAE)和加压水提取(PWE)等提取技术因其环境友好、提取效率高、提取过程快而广受欢迎。本文对两种方法的效率进行了比较。材料和方法:利用PWE和UAE从AP细胞中释放PBP。提取参数包括时间、温度、压力和超声强度进行了测试,以获得最有效的设置。采用十二烷基硫酸钠聚丙烯酰胺凝胶电泳(SDS-PAGE)对方法进行评价,并采用激光诱导荧光毛细管等电聚焦(cIEF-LIF)对PWE提取物的重复进行分析。结果:采用低温高压处理的PWE法明显快于UAE法,SDS-PAGE结果显示,提取液中藻胆蛋白含量高。cIEF-LIF分析表明,单个样品的顺序PWE是可重复的,温和提取提供了类似于市售c -藻蓝蛋白标准的荧光谱图。结论:加压水萃取是一种高效、快速、自动化程度高的AP蛋白提取方法,包括生物活性藻胆蛋白。所得结果鼓励PWE在蛋白质初级提取的小规模分析应用中使用。
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Phytochemical Analysis
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