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Comprehensive identification of polyphenolic metabolites in aspen knotwood by combination of 2D NMR and HPLC-HRMS. 结合二维 NMR 和 HPLC-HRMS 全面鉴定杨木中的多酚代谢物。
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-01-01 Epub Date: 2024-09-02 DOI: 10.1002/pca.3443
Anna V Faleva, Danil I Falev, Aleksandra A Onuchina, Nikolay V Ulyanovskii, Dmitry S Kosyakov

Introduction: European aspen (Populus tremula L.) knotwood contains large amounts of polyphenolic metabolites, mainly flavonoids, and can be considered as a promising industrial-scale source of valuable bioactive compounds. Valorization of knotwood extractives requires detailed information on their chemical composition and a relevant analytical methodology.

Objective: This study proposes combined analytical strategy for non-targeted screening and identification of polyphenolic plant metabolites and is aimed at comprehensive characterization of knotwood extractives.

Materials and methods: Aspen knotwood acetone extract with determined antioxidant activity was an object of the study. Two-dimensional NMR spectroscopy with Structure Elucidator expert system was used for preliminary search of major components and specific structures. Liquid chromatography-high-resolution mass spectrometry (HPLC-HRMS) with data-dependent MS/MS spectra acquisition was used as a complementary technique providing molecular-level characterization and identification of the detected metabolites.

Results: Twenty-eight phenolic metabolites were found and identified. Among them, flavonoids, aromadendrin and naringenin, as well as their glycosylated derivatives (mainly O-glucosides) and methyl ethers, dominated. Taxifolin and its 7-O-glucoside were detected as minor components. Other detected compounds are represented by p-coumaric acid and its rutinoside and small amounts of glycosylated ferulic acid. Nineteen of the detected compounds were discovered in aspen knotwood for the first time. The results were confirmed by preparative isolation of individual compounds and NMR studies.

Conclusion: The proposed analytical strategy based on 2D NMR and HPLC-HRMS can be considered a powerful tool in the analysis of plant extractives and allowed for the identification and semi-quantification of a large number of polyphenols in aspen knotwood.

导言:欧洲山杨(Populus tremula L.)结材含有大量多酚代谢物,主要是黄酮类化合物,可被视为有价值生物活性化合物的一种有前途的工业级来源。节疤材提取物的价值评估需要有关其化学成分的详细信息和相关的分析方法:本研究提出了非靶向筛选和鉴定植物多酚代谢物的组合分析策略,旨在全面鉴定结缕草提取物的特征:研究对象为具有确定抗氧化活性的杨木结香丙酮提取物。使用二维核磁共振光谱和 Structure Elucidator 专家系统对主要成分和特定结构进行了初步搜索。液相色谱-高分辨质谱(HPLC-HRMS)与数据相关的 MS/MS 图谱采集技术作为补充技术,为检测到的代谢物提供分子级表征和鉴定:结果:发现并鉴定了 28 种酚类代谢物。结果:共发现并鉴定出 28 种酚类代谢物,其中以黄酮类、芳香丹皮苷和柚皮苷及其糖基化衍生物(主要是 O-葡萄糖苷)和甲基醚为主。检测到的次要成分是紫杉叶素及其 7-O-葡萄糖苷。检测到的其他化合物包括对香豆酸及其芸香甙和少量糖基化阿魏酸。检测到的化合物中有 19 种是首次在杨木中发现。个别化合物的制备分离和核磁共振研究证实了这一结果:结论:基于二维 NMR 和 HPLC-HRMS 的拟议分析策略可被视为植物提取物分析的有力工具,可对杨树结香中的大量多酚进行鉴定和半定量。
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引用次数: 0
A strategy to distinguish similar traditional Chinese medicines by liquid chromatography-mass spectrometry, electronic senses, and gas chromatography-ion mobility spectrometry: Marsdeniae tenacissimae Caulis and Paederiae scandens Caulis as examples. 利用液相色谱-质谱联用仪、电子感官和气相色谱-离子迁移谱法区分同类中药的策略:以火星草和白头翁为例。
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-01-01 Epub Date: 2024-07-22 DOI: 10.1002/pca.3425
Jia-Wei Wang, Zhi-Dong Pei, Yue-Hua Chen, Si-Yu Li, Tian-Min Wang, Ting-Guo Kang, Na Li, Ya-Mei Song, Hui-Peng Song, Hui Zhang

Introduction: Marsdeniae tenacissimae Caulis (MTC), a popular traditional Chinese medicine, has been widely used in the treatment of tumor diseases. Paederiae scandens Caulis (PSC), which is similar in appearance to MTC, is a common counterfeit product. It is difficult for traditional methods to effectively distinguish between MTC and PSC. Therefore, there is an urgent need for a rapid and accurate method to identify MTC and PSC.

Objectives: The aim is to distinguish between MTC and PSC by analyzing the differences in nonvolatile organic compounds (NVOCs), taste, odor, and volatile organic compounds (VOCs).

Methods: Liquid chromatography-mass spectrometry (LC-MS) was utilized to analyze the NVOCs of MTC and PSC. Electronic tongue (E-tongue) and electronic nose (E-nose) were used to analyze their taste and odor respectively. Gas chromatography-ion mobility spectrometry (GC-IMS) was applied to analyze VOCs. Finally, multivariate statistical analyses were conducted to further investigate the differences between MTC and PSC, including principal component analysis, orthogonal partial least squares discriminant analysis, discriminant factor analysis, and soft independent modeling of class analysis.

Results: The results of this study indicate that the integrated strategy of LC-MS, E-tongue, E-nose, GC-IMS, and multivariate statistical analysis can be effectively applied to distinguish between MTC and PSC. Using LC-MS, 25 NVOCs were identified in MTC, while 18 NVOCs were identified in PSC. The major compounds in MTC are steroids, while the major compounds in PSC are iridoid glycosides. Similarly, the distinct taste difference between MTC and PSC was precisely revealed by the E-tongue. Specifically, the pronounced bitterness in PSC was proven to stem from iridoid glycosides, whereas the bitterness evident in MTC was intimately tied to steroids. The E-nose detected eight odor components in MTC and six in PSC, respectively. The subsequent statistical analysis uncovered notable differences in their odor profiles. GC-IMS provided a visual representation of the differences in VOCs between MTC and PSC. The results indicated a relatively high relative content of 82 VOCs in MTC, contrasted with 32 VOCs exhibiting a similarly high relative content in PSC.

Conclusion: In this study, for the first time, the combined use of LC-MS, E-tongue, E-nose, GC-IMS, and multivariate statistical analysis has proven to be an effective method for distinguishing between MTC and PSC from multiple perspectives. This approach provides a valuable reference for the identification of other visually similar traditional Chinese medicines.

简介火星菜(Marsdeniae tenacissimae Caulis,MTC)是一种广受欢迎的传统中药,被广泛用于治疗肿瘤疾病。与 MTC 外形相似的 Pederiae scandens Caulis(PSC)是一种常见的假冒产品。传统方法很难有效区分 MTC 和 PSC。因此,迫切需要一种快速准确的方法来鉴别 MTC 和 PSC:目的:旨在通过分析非挥发性有机化合物(NVOC)、味道、气味和挥发性有机化合物 (VOC)的差异来区分 MTC 和 PSC:方法:采用液相色谱-质谱法(LC-MS)分析 MTC 和 PSC 的非挥发性有机化合物。使用电子舌(E-tongue)和电子鼻(E-nose)分别分析其味道和气味。气相色谱-离子迁移谱法(GC-IMS)用于分析挥发性有机化合物。最后,为进一步研究 MTC 和 PSC 之间的差异,进行了多变量统计分析,包括主成分分析、正交偏最小二乘法判别分析、判别因子分析和类分析软独立建模:研究结果表明,LC-MS、E-tongue、E-nose、GC-IMS 和多元统计分析的综合策略可有效区分 MTC 和 PSC。利用 LC-MS 方法,在 MTC 中鉴定出了 25 种 NVOC,而在 PSC 中鉴定出了 18 种 NVOC。MTC 中的主要化合物是类固醇,而 PSC 中的主要化合物是鸢尾甙。同样,E-tongue 也准确地揭示了 MTC 和 PSC 之间明显的味道差异。具体来说,PSC 中明显的苦味被证明来自鸢尾甙,而 MTC 中明显的苦味则与类固醇密切相关。电子鼻分别在 MTC 和 PSC 中检测到八种气味成分。随后的统计分析发现了它们气味特征的显著差异。气相色谱-质谱法直观地显示了 MTC 和 PSC 在挥发性有机化合物方面的差异。结果表明,在 MTC 中,82 种挥发性有机化合物的相对含量较高,而在 PSC 中,32 种挥发性有机化合物的相对含量同样较高:在这项研究中,首次将 LC-MS、电子舌、电子鼻、GC-IMS 和多元统计分析结合使用,证明这是一种从多个角度区分 MTC 和 PSC 的有效方法。这种方法为鉴别其他视觉相似的中药提供了有价值的参考。
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引用次数: 0
Comparative study on metabolite variations of two rose teas by plant metabolomics and revealing their skin-whitening candidates by spectrum-effect relationship analysis. 利用植物代谢组学比较研究两种玫瑰花茶的代谢物变化,并通过谱效关系分析揭示其美白候选物质。
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-01-01 Epub Date: 2024-07-24 DOI: 10.1002/pca.3420
Jian Xu, Hongwei Ye, Xindan Zhang, Yangbin Lv, Shengqiang Tong, Biao Liu, Zhimin Ou, Chu Chu

Introduction: Rosa rugosa var. plena Rehd (CBR) and Rosa chinensis cv. "JinBian" (JBR) are two common species used in rose tea among different original species. CBR, the officially documented original plant of the rose species for food and medicinal purposes, is more costly than JBR. With increasing demand for different rose teas, it is meaningful to compare the chemical constituents for their quality control and reveal their skin-whitening components that will provide in-depth insights for the expansion of the rose tea industry.

Objective: This study aims to reveal the chemical variances between CBR and JBR and determine their skin-whitening components.

Methodology: A strategy obtained by combining MS-based plant-metabolomics with spectrum-effect relationship analysis has been proposed for unveiling chemical differences between CBR and JBR and further exploring their potential skin-whitening components.

Results: A total of 2030 metabolites were found that revealed considerable differences between CBR and JBR. The results of bioactivity assay demonstrated that JBR exhibited stronger tyrosinase inhibition activity than CBR. Six potential skin-whitening compounds (di-O-galloyl-HHDP-glucoside, tri-O-galloyl-HHDP-glucoside, spiraeoside, quinic acid, rugosin A, and 1,2,3,6-tetra-O-galloyl-glucose) were discovered as potential tyrosinase inhibitors, via spectrum-effect relationship analysis. This is the first time that di-O-galloyl-HHDP-glucoside, tri-O-galloyl-HHDP-glucoside, rugosin A, and 1,2,3,6-tetra-O-galloyl-glucose have been reported with tyrosinase inhibitory activity. Additionally, molecular docking analysis was used to reveal the inhibition mechanism of these compounds toward tyrosinase.

Conclusion: The finding of this study will be of great importance for the quality control of the two types of rose teas, and the revealed active ingredients will provide in-depth insights for the expansion of the rose tea industry.

简介Rosa rugosa var. plena Rehd(CBR)和 Rosa chinensis cv. "JinBian"(JBR)是不同原种中用于玫瑰花茶的两个常见品种。CBR 是官方记载的食用和药用玫瑰原种,价格高于 JBR。随着人们对不同玫瑰花茶的需求不断增加,比较其化学成分以控制其质量并揭示其美白成分是很有意义的,这将为玫瑰花茶产业的发展提供深入的见解:本研究旨在揭示 CBR 和 JBR 之间的化学差异,并确定其美白成分:方法:提出了一种基于 MS 的植物代谢组学与谱效关系分析相结合的策略,以揭示 CBR 和 JBR 之间的化学差异,并进一步探索其潜在的美白成分:结果:共发现 2030 种代谢物,揭示了 CBR 和 JBR 之间的显著差异。生物活性测定结果表明,JBR 比 CBR 具有更强的酪氨酸酶抑制活性。通过谱效关系分析,发现了六种潜在的美白化合物(二-O-缩水甘油基-HHDP-葡萄糖苷、三-O-缩水甘油基-HHDP-葡萄糖苷、螺旋苷、奎宁酸、地毯苷 A 和 1,2,3,6-四-O-缩水甘油基-葡萄糖)是潜在的酪氨酸酶抑制剂。这是首次报道二-O-缩水甘油-HHDP-葡萄糖苷、三-O-缩水甘油-HHDP-葡萄糖苷、芦可新 A 和 1,2,3,6- 四-O-缩水甘油-葡萄糖具有抑制酪氨酸酶的活性。此外,还利用分子对接分析揭示了这些化合物对酪氨酸酶的抑制机制:本研究的发现对两种玫瑰花茶的质量控制具有重要意义,所揭示的有效成分将为玫瑰花茶产业的拓展提供深入的见解。
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引用次数: 0
Integrated metabolomic and transcriptomic analysis reveals variation in the metabolites of Dendrobium officinale, Dendrobium huoshanense, Dendrobium nobile. 综合代谢组学和转录组学分析揭示了 officinale 铁皮石斛、 Huoshanense 铁皮石斛和 Dendrobium nobile 铁皮石斛代谢物的变异。
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-01-01 Epub Date: 2024-08-08 DOI: 10.1002/pca.3429
Li Chen, Shuna Duan, Jiahui Huang, Li Hu, Shuping Liu, Qiqian Lan, Gang Wei

Introduction: Dendrobium is a perennial herb of the genus Dendrobium in the orchid family. Generally, Dendrobium officinale (TP) and Dendrobium huoshanense (HS) are both considered to have the function of yin-nourishing, while Dendrobium nobile (JC) has better efficacy of heat-clearing. However, because of the wide variety of Dendrobium species, the classification and clinical application of Dendrobium are often confused clearly distinguished in different medicinal uses.

Objective: In order to compare the differentially accumulated metabolites (DAMs) and differentially expressed genes (DEGs) of the three Dendrobium.

Methods: We selected TP, HS, and JC cultivated on stone for metabolomic and transcriptomic analyses between 2 and 3 years.

Results: The results showed that a total of 489 metabolites were obtained, including 72 were DAMs. The 72 DAMs were mainly enriched in metabolic pathways and biosynthesis of secondary metabolites. Transcriptome analysis results showed that 1,038 annotated DEGs were identified among the three Dendrobium species. The comprehensive analysis showed that the three Dendrobium differed in the distribution of the content of four major active components: flavonoids, amino acids, alkaloids, and sugars and alcohols, among which the DAMs and DEGs were mainly enriched in metabolic pathways and secondary metabolite biosynthesis.

Conclusion: In this study, metabolomics and transcriptomics were utilized to compare the differences among the three species of Dendrobium, to provide theoretical references for future research and selection of different species of Dendrobium based on different medicinal uses, and to lay the foundation for further research on the biosynthesis of flavonoids in Dendrobium.

介绍:铁皮石斛是兰科石斛属多年生草本植物。一般认为,铁皮石斛(TP)和霍山石斛(HS)都具有滋阴的作用,而金钗石斛(JC)则具有较好的清热功效。然而,由于铁皮石斛种类繁多,不同药用价值的铁皮石斛在分类和临床应用上往往分不清楚:目的:比较三种铁皮石斛的差异累积代谢物(DAMs)和差异表达基因(DEGs):方法:选取在石材上栽培2至3年的TP、HS和JC进行代谢组和转录组分析:结果表明,共获得 489 个代谢物,其中 72 个为 DAMs。这 72 个 DAMs 主要富集在代谢途径和次生代谢物的生物合成中。转录组分析结果显示,三个铁皮石斛品种共鉴定出 1,038 个注释 DEGs。综合分析表明,三种铁皮石斛在黄酮类、氨基酸、生物碱、糖类和醇类四种主要活性成分的含量分布上存在差异,其中DAMs和DEGs主要富集在代谢途径和次生代谢物的生物合成中:本研究利用代谢组学和转录组学比较了三种铁皮石斛的差异,为今后研究和根据不同药用价值选择不同品种的铁皮石斛提供了理论参考,也为进一步研究铁皮石斛中黄酮类化合物的生物合成奠定了基础。
{"title":"Integrated metabolomic and transcriptomic analysis reveals variation in the metabolites of Dendrobium officinale, Dendrobium huoshanense, Dendrobium nobile.","authors":"Li Chen, Shuna Duan, Jiahui Huang, Li Hu, Shuping Liu, Qiqian Lan, Gang Wei","doi":"10.1002/pca.3429","DOIUrl":"10.1002/pca.3429","url":null,"abstract":"<p><strong>Introduction: </strong>Dendrobium is a perennial herb of the genus Dendrobium in the orchid family. Generally, Dendrobium officinale (TP) and Dendrobium huoshanense (HS) are both considered to have the function of yin-nourishing, while Dendrobium nobile (JC) has better efficacy of heat-clearing. However, because of the wide variety of Dendrobium species, the classification and clinical application of Dendrobium are often confused clearly distinguished in different medicinal uses.</p><p><strong>Objective: </strong>In order to compare the differentially accumulated metabolites (DAMs) and differentially expressed genes (DEGs) of the three Dendrobium.</p><p><strong>Methods: </strong>We selected TP, HS, and JC cultivated on stone for metabolomic and transcriptomic analyses between 2 and 3 years.</p><p><strong>Results: </strong>The results showed that a total of 489 metabolites were obtained, including 72 were DAMs. The 72 DAMs were mainly enriched in metabolic pathways and biosynthesis of secondary metabolites. Transcriptome analysis results showed that 1,038 annotated DEGs were identified among the three Dendrobium species. The comprehensive analysis showed that the three Dendrobium differed in the distribution of the content of four major active components: flavonoids, amino acids, alkaloids, and sugars and alcohols, among which the DAMs and DEGs were mainly enriched in metabolic pathways and secondary metabolite biosynthesis.</p><p><strong>Conclusion: </strong>In this study, metabolomics and transcriptomics were utilized to compare the differences among the three species of Dendrobium, to provide theoretical references for future research and selection of different species of Dendrobium based on different medicinal uses, and to lay the foundation for further research on the biosynthesis of flavonoids in Dendrobium.</p>","PeriodicalId":20095,"journal":{"name":"Phytochemical Analysis","volume":" ","pages":"181-193"},"PeriodicalIF":3.0,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141907365","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Feature-based molecular networking and MS2LDA analysis for the dereplication of adjacent bis-tetrahydrofuran Annonaceous acetogenins. 基于特征的分子网络和 MS2LDA 分析,用于相邻双四氢呋喃芒柄蜡素的去复制。
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-01-01 Epub Date: 2024-09-05 DOI: 10.1002/pca.3444
Aleksandra Gurgul, Chun-Tao Che

Introduction: Annonaceous acetogenins are a group of natural polyketide compounds possessing notable cytotoxic and antitumor properties. Mass spectrometry (MS) techniques can be used for the structural determination of these compounds, including the location of functional groups along the long alkyl chain.

Objective: This study aims to develop a convenient liquid chromatography (LC)-MS-based method for the dereplication of acetogenins in plant extracts using a molecular networking approach.

Methodology: The LC-electrospray ionization (ESI)-MS/MS spectra of pure adjacent bis-tetrahydrofuran (THF) acetogenins isolated from Uvaria rufa (Annonaceae) were acquired, along with those of the crude ethyl acetate and hexanes fractions of the plant extract, followed by dereplication and molecular networking analysis using the Global Natural Products Social Molecular Networking (GNPS) platform.

Results: A high level of fragmentation of the protonated molecules [M + H]+ was observed at collision energies of 37.5 and 25.0 eV. The application of feature-based molecular networking (FBMN) allowed for distinguishing diastereoisomers based on different retention times in the reversed-phase high-performance liquid chromatography method. The acetogenin possessing one or more additional OH groups on the methyl-terminal chain side of the OH-flanked bis-THF ring unit were grouped separately from those lacking such substructure. Furthermore, the MS2LDA analysis revealed shared Mass2Motifs among acetogenins, confirming the structural relations within the molecular network.

Conclusions: The ESI-MS/MS-based molecular networking method provided an effective strategy for the dereplication of acetogenins in plant extracts. It is anticipated that this molecular networking approach could be extended to other types of acetogenins to facilitate rapid identification of this class of compounds.

简介茴香属植物苷元是一类天然多酮化合物,具有显著的细胞毒性和抗肿瘤特性。质谱(MS)技术可用于确定这些化合物的结构,包括沿长烷基链的官能团的位置:本研究旨在开发一种基于液相色谱(LC)-质谱(MS)的简便方法,利用分子网络方法去除植物提取物中的炔苷元:方法:利用全球天然产品社会分子网络(GNPS)平台,对从 Uvaria rufa(芒柄菊科)中分离得到的纯邻近双四氢呋喃(THF)乙酰苷元以及植物提取物的乙酸乙酯粗馏分和己烷馏分进行去复制和分子网络分析,获得其液相色谱-电喷雾电离(ESI)-MS/MS 图谱:结果:质子化分子[M + H]+ 在 37.5 和 25.0 eV 的碰撞能量下发生了高水平的碎片化。应用基于特征的分子网络(FBMN),可以根据反相高效液相色谱法中不同的保留时间区分非对映异构体。在羟基侧翼双 THF 环单元的甲基末端链侧具有一个或多个额外羟基的乙酰皂苷元与缺乏此类亚结构的乙酰皂苷元被分开分组。此外,MS2LDA 分析还发现了苷元之间共享的 Mass2Motifs,证实了分子网络中的结构关系:基于 ESI-MS/MS 的分子网络方法为植物提取物中萃取苷元的去复制提供了一种有效的策略。预计这种分子网络方法可扩展到其他类型的苷元,以促进该类化合物的快速鉴定。
{"title":"Feature-based molecular networking and MS2LDA analysis for the dereplication of adjacent bis-tetrahydrofuran Annonaceous acetogenins.","authors":"Aleksandra Gurgul, Chun-Tao Che","doi":"10.1002/pca.3444","DOIUrl":"10.1002/pca.3444","url":null,"abstract":"<p><strong>Introduction: </strong>Annonaceous acetogenins are a group of natural polyketide compounds possessing notable cytotoxic and antitumor properties. Mass spectrometry (MS) techniques can be used for the structural determination of these compounds, including the location of functional groups along the long alkyl chain.</p><p><strong>Objective: </strong>This study aims to develop a convenient liquid chromatography (LC)-MS-based method for the dereplication of acetogenins in plant extracts using a molecular networking approach.</p><p><strong>Methodology: </strong>The LC-electrospray ionization (ESI)-MS/MS spectra of pure adjacent bis-tetrahydrofuran (THF) acetogenins isolated from Uvaria rufa (Annonaceae) were acquired, along with those of the crude ethyl acetate and hexanes fractions of the plant extract, followed by dereplication and molecular networking analysis using the Global Natural Products Social Molecular Networking (GNPS) platform.</p><p><strong>Results: </strong>A high level of fragmentation of the protonated molecules [M + H]<sup>+</sup> was observed at collision energies of 37.5 and 25.0 eV. The application of feature-based molecular networking (FBMN) allowed for distinguishing diastereoisomers based on different retention times in the reversed-phase high-performance liquid chromatography method. The acetogenin possessing one or more additional OH groups on the methyl-terminal chain side of the OH-flanked bis-THF ring unit were grouped separately from those lacking such substructure. Furthermore, the MS2LDA analysis revealed shared Mass2Motifs among acetogenins, confirming the structural relations within the molecular network.</p><p><strong>Conclusions: </strong>The ESI-MS/MS-based molecular networking method provided an effective strategy for the dereplication of acetogenins in plant extracts. It is anticipated that this molecular networking approach could be extended to other types of acetogenins to facilitate rapid identification of this class of compounds.</p>","PeriodicalId":20095,"journal":{"name":"Phytochemical Analysis","volume":" ","pages":"317-325"},"PeriodicalIF":3.0,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142133460","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Rapidly screening of pancreatic lipase inhibitors from Clematis tangutica using affinity ultrafiltration-HPLC-QTOFMS technique combined with targeted separation, in vitro validation, and molecular docking. 利用亲和超滤-高效液相色谱-QTOFMS技术,结合靶向分离、体外验证和分子对接,快速筛选唐铁线莲中的胰脂肪酶抑制剂。
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-01-01 Epub Date: 2024-07-15 DOI: 10.1002/pca.3422
Yangfei Wei, Tao Chen, Hai Song, Shuo Wang, Cheng Shen, Xiaojun Wang, Yulin Li, Junke Wang

Introduction: Screening of novel pancreatic lipase inhibitors from complex natural products is a meaningful task.

Objectives: Through accurately screening and separating pancreatic lipase inhibitors from Clematis tangutica (C. tangutica), to discover new leading compounds for slimming and accelerate the development and utilization of Tibetan medicine resources.

Methods: An integrated strategy that combines affinity ultrafiltration and high-performance liquid chromatography-quadrupole time-of-flight mass spectrometry (AU-HPLC-QTOFMS), targeted separation, in vitro validation, and molecular docking was developed to screen pancreatic lipase inhibitors from C. tangutica. The AU-HPLC-QTOFMS technique was performed to fish for the potential active substances. Macroporous resin, preparative liquid chromatography, and high-speed countercurrent chromatography were implemented for the accurate and targeted separation of active compounds. The inhibitory activities of target compounds to pancreatic lipase were detected by the inhibition experiments in vitro. The binding affinities and binding sites were analyzed using molecular docking.

Results: A total of eleven kinds of pancreatic lipase inhibitory substances were screened from C. tangutica. Seven triterpenoid saponins were screened for the first time as lipase inhibitors and successfully prepared with purities higher than 97%. Tanguticoside B, clematangoticoside J, hederoside H1, and rutin showed stronger inhibitory effects with IC50 values of 1.539 ± 0.048, 1.661 ± 0.092, 1.793 ± 0.069, and 1.792 ± 0.094 mmol/l. Moreover, they have the lowest ΔG values of -10.84, -9.97, -10.87, and -9.39 kcal/mol to pancreatic lipase.

Conclusion: The integrated strategy using AU-HPLC-QTOFMS, targeted separation, in vitro validation, and molecular docking was feasible for rapidly screening and directionally isolating pancreatic lipase inhibitors from C. tangutica.

简介:从复杂的天然产物中筛选新型胰脂肪酶抑制剂是一项有意义的任务:从复杂的天然产物中筛选新型胰脂肪酶抑制剂是一项有意义的工作:方法:采用亲和超滤、高效液相色谱-四极杆质谱联用技术,从唐古拉山金线莲(Clematis tangutica)中准确筛选分离出胰脂肪酶抑制剂,发现新的减肥主导化合物,加速藏药资源的开发利用:方法:采用亲和超滤、高效液相色谱-四极杆飞行时间质谱(AU-HPLC-QTOFMS)、靶向分离、体外验证和分子对接相结合的方法筛选唐古拉胰脂肪酶抑制剂。采用 AU-HPLC-QTOFMS 技术筛选潜在的活性物质。采用大孔树脂、制备液相色谱法和高速逆流色谱法准确而有针对性地分离了活性化合物。体外抑制实验检测了目标化合物对胰脂肪酶的抑制活性。通过分子对接分析了目标化合物与胰脂肪酶的结合亲和力和结合位点:结果:从唐古拉山草药中筛选出 11 种抑制胰脂肪酶的物质。首次筛选出7种三萜类皂苷作为脂肪酶抑制剂,并成功制备出纯度高于97%的抑制剂。唐古特皂甙 B、夹竹桃皂甙 J、大戟皂甙 H1 和芦丁具有较强的抑制作用,其 IC50 值分别为 1.539 ± 0.048、1.661 ± 0.092、1.793 ± 0.069 和 1.792 ± 0.094 mmol/l。此外,与胰脂肪酶相比,它们的ΔG值最低,分别为-10.84、-9.97、-10.87和-9.39 kcal/mol:采用 AU-HPLC-QTOFMS、靶向分离、体外验证和分子对接等综合策略从唐古拉菌中快速筛选并定向分离出胰脂肪酶抑制剂是可行的。
{"title":"Rapidly screening of pancreatic lipase inhibitors from Clematis tangutica using affinity ultrafiltration-HPLC-QTOFMS technique combined with targeted separation, in vitro validation, and molecular docking.","authors":"Yangfei Wei, Tao Chen, Hai Song, Shuo Wang, Cheng Shen, Xiaojun Wang, Yulin Li, Junke Wang","doi":"10.1002/pca.3422","DOIUrl":"10.1002/pca.3422","url":null,"abstract":"<p><strong>Introduction: </strong>Screening of novel pancreatic lipase inhibitors from complex natural products is a meaningful task.</p><p><strong>Objectives: </strong>Through accurately screening and separating pancreatic lipase inhibitors from Clematis tangutica (C. tangutica), to discover new leading compounds for slimming and accelerate the development and utilization of Tibetan medicine resources.</p><p><strong>Methods: </strong>An integrated strategy that combines affinity ultrafiltration and high-performance liquid chromatography-quadrupole time-of-flight mass spectrometry (AU-HPLC-QTOFMS), targeted separation, in vitro validation, and molecular docking was developed to screen pancreatic lipase inhibitors from C. tangutica. The AU-HPLC-QTOFMS technique was performed to fish for the potential active substances. Macroporous resin, preparative liquid chromatography, and high-speed countercurrent chromatography were implemented for the accurate and targeted separation of active compounds. The inhibitory activities of target compounds to pancreatic lipase were detected by the inhibition experiments in vitro. The binding affinities and binding sites were analyzed using molecular docking.</p><p><strong>Results: </strong>A total of eleven kinds of pancreatic lipase inhibitory substances were screened from C. tangutica. Seven triterpenoid saponins were screened for the first time as lipase inhibitors and successfully prepared with purities higher than 97%. Tanguticoside B, clematangoticoside J, hederoside H<sub>1</sub>, and rutin showed stronger inhibitory effects with IC<sub>50</sub> values of 1.539 ± 0.048, 1.661 ± 0.092, 1.793 ± 0.069, and 1.792 ± 0.094 mmol/l. Moreover, they have the lowest ΔG values of -10.84, -9.97, -10.87, and -9.39 kcal/mol to pancreatic lipase.</p><p><strong>Conclusion: </strong>The integrated strategy using AU-HPLC-QTOFMS, targeted separation, in vitro validation, and molecular docking was feasible for rapidly screening and directionally isolating pancreatic lipase inhibitors from C. tangutica.</p>","PeriodicalId":20095,"journal":{"name":"Phytochemical Analysis","volume":" ","pages":"101-112"},"PeriodicalIF":3.0,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141620665","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Integrating DNA Barcoding Within an Orthogonal Approach for Herbal Product Authentication: A Narrative Review. 将 DNA 条形码纳入草药产品认证的正交方法:叙述性综述。
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-01-01 Epub Date: 2024-11-12 DOI: 10.1002/pca.3466
Nazia Nazar, Akanksha Saxena, Anu Sebastian, Adrian Slater, Velusamy Sundaresan, Tiziana Sgamma

Introduction: Existing methods for morphological, organoleptic, and chemical authentication may not adequately ensure the accurate identification of plant species or guarantee safety. Herbal raw material authentication remains a major challenge in herbal medicine. Over the past decade, DNA barcoding, combined with an orthogonal approach integrating various testing methods for quality assurance, has emerged as a new trend in plant authentication.

Objective: The review evaluates DNA barcoding and common alternative testing in plant-related sectors to enhance quality assurance and accurate authentication.

Method: Studies were selected based on their relevance to the identification, quality assurance, and safety of herbal products. Inclusion criteria were peer-reviewed articles, systematic reviews, and relevant case studies from the last two decades focused on DNA barcoding, identification methods, and their applications. Exclusion criteria involved studies lacking empirical data, those not peer-reviewed, or those unrelated to the main focus. This ensured the inclusion of high-quality, pertinent sources while excluding less relevant studies.

Results: An orthogonal approach refers to the use of multiple, independent methods that provide complementary information for more accurate plant identification and quality assurance. This reduces false positives or negatives by confirming results through different techniques, combining DNA barcoding with morphological analysis or chemical profiling. It enhances confidence in results, particularly in cases of potential adulteration or misidentification of plant materials.

Conclusion: This study highlights the persistent challenges in assuring the quality, purity, and safety of plant materials. Additionally, it stresses the importance of incorporating DNA-based authentication alongside traditional methods, to enhance plant material identification.

导言:现有的形态、感官和化学鉴定方法可能无法充分确保植物物种的准确鉴定或保证安全性。中草药原料鉴定仍是中草药领域的一大挑战。在过去的十年中,DNA 条形编码结合各种检测方法的正交方法已成为植物鉴定的新趋势:本综述评估了 DNA 条形码和植物相关领域常用的替代检测方法,以提高质量保证和准确鉴定:方法:根据研究与草药产品的鉴定、质量保证和安全性的相关性选择研究。纳入标准为同行评议文章、系统综述以及过去二十年中关于 DNA 条形码、鉴定方法及其应用的相关案例研究。排除标准包括缺乏经验数据的研究、未经同行评议的研究或与主要关注点无关的研究。这样既能确保纳入高质量的相关资料,又能排除相关性较低的研究:正交方法是指使用多种独立的方法提供互补信息,以实现更准确的植物鉴定和质量保证。这种方法通过不同的技术确认结果,将 DNA 条形码与形态分析或化学分析相结合,从而减少假阳性或假阴性。它增强了对结果的信心,特别是在植物材料可能掺假或识别错误的情况下:本研究强调了在确保植物材料的质量、纯度和安全性方面长期存在的挑战。此外,它还强调了将基于 DNA 的鉴定与传统方法相结合以提高植物材料鉴定水平的重要性。
{"title":"Integrating DNA Barcoding Within an Orthogonal Approach for Herbal Product Authentication: A Narrative Review.","authors":"Nazia Nazar, Akanksha Saxena, Anu Sebastian, Adrian Slater, Velusamy Sundaresan, Tiziana Sgamma","doi":"10.1002/pca.3466","DOIUrl":"10.1002/pca.3466","url":null,"abstract":"<p><strong>Introduction: </strong>Existing methods for morphological, organoleptic, and chemical authentication may not adequately ensure the accurate identification of plant species or guarantee safety. Herbal raw material authentication remains a major challenge in herbal medicine. Over the past decade, DNA barcoding, combined with an orthogonal approach integrating various testing methods for quality assurance, has emerged as a new trend in plant authentication.</p><p><strong>Objective: </strong>The review evaluates DNA barcoding and common alternative testing in plant-related sectors to enhance quality assurance and accurate authentication.</p><p><strong>Method: </strong>Studies were selected based on their relevance to the identification, quality assurance, and safety of herbal products. Inclusion criteria were peer-reviewed articles, systematic reviews, and relevant case studies from the last two decades focused on DNA barcoding, identification methods, and their applications. Exclusion criteria involved studies lacking empirical data, those not peer-reviewed, or those unrelated to the main focus. This ensured the inclusion of high-quality, pertinent sources while excluding less relevant studies.</p><p><strong>Results: </strong>An orthogonal approach refers to the use of multiple, independent methods that provide complementary information for more accurate plant identification and quality assurance. This reduces false positives or negatives by confirming results through different techniques, combining DNA barcoding with morphological analysis or chemical profiling. It enhances confidence in results, particularly in cases of potential adulteration or misidentification of plant materials.</p><p><strong>Conclusion: </strong>This study highlights the persistent challenges in assuring the quality, purity, and safety of plant materials. Additionally, it stresses the importance of incorporating DNA-based authentication alongside traditional methods, to enhance plant material identification.</p>","PeriodicalId":20095,"journal":{"name":"Phytochemical Analysis","volume":" ","pages":"7-29"},"PeriodicalIF":3.0,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11743069/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142626236","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effective strategy for distinguishing raw and vinegar Schisandrae Chinensis Fructus based on electronic eye and electronic tongue combined with chemometrics. 基于电子眼和电子舌结合化学计量学的五味子生醋鉴别有效策略
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-01-01 Epub Date: 2024-08-05 DOI: 10.1002/pca.3427
Lixia Wang, Kaiyang Liu, Tong Wu, Xiaoxu Chen, Yingying Chen, Chunyu Yue, Zhuju Wang, Hongwei Wu, Liying Tang

Introduction: Schisandrae Chinensis Fructus (SCF), a traditional Chinese medicine, has been used in treating virtual injury and strain since ancient times. The Chinese Pharmacopoeia reveals that SCF includes raw (RSCF) and vinegar-processed (VSCF) decoction pieces.

Objective: This study developed an effective method combining the electronic eye (e-eye), electronic tongue (e-tongue), and chemometrics to discriminate RSCF and VSCF from the perspective of chemical composition, color, and taste.

Material and methods: First, RSCF were collected and processed into VSCF, and their color parameters, e-tongue sensory properties, high-performance liquid chromatography (HPLC) and ultra-HPLC (UPLC) characteristic fingerprints, and nominal ingredients were determined. Multivariate statistical analyses, including principal component, linear discriminant, similarity, and partial least squares discriminant analyses, were conducted.

Results: HPLC and UPLC fingerprints were established, demonstrating a > 0.900 similarity. The content determination indicated increased schisantherin A, schisantherin B, and schisandrin A contents in VSCF. The e-eye data demonstrated a > 1.5 total color difference before and after processing ΔE*ab, indicating the significantly changed sample color and appearance before and after processing. The e-tongue technology was used to quantitatively characterize the taste of RSCF and VSCF. The t-test revealed significantly reduced sourness, aftertaste-bitter, and aftertaste-astringent values of SCF after vinegar processing. Principal component and partial least squares discriminant analyses indicated that e-eye and e-tongue realize the rapid RSCF and VSCF identification.

Conclusion: The proposed comprehensive strategy of electronic eye and electronic tongue combined with chemometrics demonstrated satisfactory results with high efficiency, accuracy, and reliability. This can be developed into a novel and accurate method for discriminating RSCF and VSCF.

简介五味子是一种传统中药,自古以来就被用于治疗虚损劳损。中国药典》记载,五味子包括生煎和醋煎两种:本研究开发了一种结合电子眼(e-eye)、电子舌(e-tongue)和化学计量学的有效方法,从化学成分、颜色和味道的角度来鉴别生煎和醋煎:首先,收集 RSCF 并加工成 VSCF,测定其颜色参数、电子舌感官特性、高效液相色谱(HPLC)和超高效液相色谱(UPLC)特征指纹图谱以及标称成分。进行了多变量统计分析,包括主成分分析、线性判别分析、相似性分析和偏最小二乘法判别分析:结果:确定了 HPLC 和 UPLC 指纹,相似度大于 0.900。含量测定表明,VSCF 中的五味子苷 A、五味子苷 B 和五味子苷 A 含量增加。电子眼数据显示,加工前后的总色差ΔE*ab > 1.5,表明加工前后样品的颜色和外观发生了显著变化。电子舌技术用于定量描述 RSCF 和 VSCF 的味道。t 检验表明,醋加工后 SCF 的酸味、后味-苦味和后味-涩味值明显降低。主成分分析和偏最小二乘法判别分析表明,电子眼和电子舌实现了对 RSCF 和 VSCF 的快速识别:结论:所提出的电子眼和电子舌与化学计量学相结合的综合策略取得了令人满意的结果,具有高效性、准确性和可靠性。结论:所提出的电子眼和电子舌与化学计量学相结合的综合策略取得了令人满意的结果,具有高效、准确、可靠的特点,可以发展成为一种新颖、准确的 RSCF 和 VSCF 识别方法。
{"title":"Effective strategy for distinguishing raw and vinegar Schisandrae Chinensis Fructus based on electronic eye and electronic tongue combined with chemometrics.","authors":"Lixia Wang, Kaiyang Liu, Tong Wu, Xiaoxu Chen, Yingying Chen, Chunyu Yue, Zhuju Wang, Hongwei Wu, Liying Tang","doi":"10.1002/pca.3427","DOIUrl":"10.1002/pca.3427","url":null,"abstract":"<p><strong>Introduction: </strong>Schisandrae Chinensis Fructus (SCF), a traditional Chinese medicine, has been used in treating virtual injury and strain since ancient times. The Chinese Pharmacopoeia reveals that SCF includes raw (RSCF) and vinegar-processed (VSCF) decoction pieces.</p><p><strong>Objective: </strong>This study developed an effective method combining the electronic eye (e-eye), electronic tongue (e-tongue), and chemometrics to discriminate RSCF and VSCF from the perspective of chemical composition, color, and taste.</p><p><strong>Material and methods: </strong>First, RSCF were collected and processed into VSCF, and their color parameters, e-tongue sensory properties, high-performance liquid chromatography (HPLC) and ultra-HPLC (UPLC) characteristic fingerprints, and nominal ingredients were determined. Multivariate statistical analyses, including principal component, linear discriminant, similarity, and partial least squares discriminant analyses, were conducted.</p><p><strong>Results: </strong>HPLC and UPLC fingerprints were established, demonstrating a > 0.900 similarity. The content determination indicated increased schisantherin A, schisantherin B, and schisandrin A contents in VSCF. The e-eye data demonstrated a > 1.5 total color difference before and after processing ΔE*<sub>ab</sub>, indicating the significantly changed sample color and appearance before and after processing. The e-tongue technology was used to quantitatively characterize the taste of RSCF and VSCF. The t-test revealed significantly reduced sourness, aftertaste-bitter, and aftertaste-astringent values of SCF after vinegar processing. Principal component and partial least squares discriminant analyses indicated that e-eye and e-tongue realize the rapid RSCF and VSCF identification.</p><p><strong>Conclusion: </strong>The proposed comprehensive strategy of electronic eye and electronic tongue combined with chemometrics demonstrated satisfactory results with high efficiency, accuracy, and reliability. This can be developed into a novel and accurate method for discriminating RSCF and VSCF.</p>","PeriodicalId":20095,"journal":{"name":"Phytochemical Analysis","volume":" ","pages":"156-165"},"PeriodicalIF":3.0,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141894094","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Separation of astragaloside IV from Astragalus membranaceus based on high-speed countercurrent chromatography in continuous injection mode. 基于高速逆流色谱连续进样模式分离黄芪中的黄芪皂苷 IV
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-01-01 Epub Date: 2024-08-26 DOI: 10.1002/pca.3438
Yin-Di Zhao, Qian-Xia Su, Ning-Li Wang, Dong Pei, Xin-Yi Huang

Introduction: Astragaloside IV (AS-IV) is an index for the quality evaluation of the traditional Chinese medicine Astragalus and an important material basis for Astragalus to exert its medicinal effects, and it is difficult to obtain a single AS-IV by ordinary separation methods.

Objective: To find a new isolation method that can prepare AS-IV quickly and efficiently.

Methodology: AS-IV was isolated from Astragalus membranaceus extract by high-speed countercurrent chromatography using a two-phase solvent system consisting of ethyl acetate/n-butanol/water (4.2:0.8:5, v/v) at a speed of 950 rpm at a flow rate of 2 mL/min using one of the high-speed countercurrent chromatographic sequential injection models developed during the previous study.

Results: Compared with the common countercurrent chromatographic separation, this separation method increased the injection volume and yield by 4-fold and 4.47-fold, respectively, with only about 1.2-fold increase in solvent consumption and separation time, and the purity was basically not reduced, and 55.9 mg of AS-IV, with a purity of 96.95%, was finally prepared from 400 mg of the crude extract in 240 min.

Conclusion: The continuous injection mode of high-speed countercurrent chromatography was able to successfully prepare a large amount of AS-IV with high purity at one time.

引言黄芪皂苷IV(AS-IV)是评价中药黄芪质量的一项指标,也是黄芪发挥药效的重要物质基础,而普通的分离方法很难获得单一的AS-IV:方法:从黄芪中分离出 AS-IV:从黄芪提取物中采用高速逆流色谱法分离AS-IV,使用的溶剂系统为乙酸乙酯/正丁醇/水(4.2:0.8:5, v/v),流速为2 mL/min,转速为950 rpm:结果:与普通逆流色谱分离相比,该分离方法的进样量和收率分别提高了4倍和4.47倍,而溶剂消耗量和分离时间仅增加了约1.2倍,纯度基本没有降低,400 mg粗提物在240 min内最终制备出55.9 mg AS-IV,纯度为96.95%:结论:高速逆流色谱的连续进样模式能够一次性成功制备大量高纯度的 AS-IV。
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引用次数: 0
Comprehensive metabolome characterization of leaves, internodes, and aerial roots of Vanilla planifolia by untargeted LC-MS and GC × GC-MS. 利用非靶向液相色谱-质谱联用仪和气相色谱-质谱联用仪对香草叶、节间和气生根的代谢组进行综合表征。
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-01-01 Epub Date: 2024-07-21 DOI: 10.1002/pca.3414
Falco Beer, Christoph H Weinert, Johannes Wellmann, Silke Hillebrand, Jakob Peter Ley, Sebastian T Soukup, Sabine E Kulling

Introduction: Untargeted metabolomics is a powerful tool that provides strategies for gaining a systematic understanding of quantitative changes in the levels of metabolites, especially when combining different metabolomic platforms. Vanilla is one of the world's most popular flavors originating from cured pods of the orchid Vanilla planifolia. However, only a few studies have investigated the metabolome of V. planifolia, and no LC-MS or GC-MS metabolomics studies with respect to leaves have been performed.

Objective: The aim of the study was to comprehensively characterize the metabolome of different organs (leaves, internodes, and aerial roots) of V. planifolia.

Material and methods: Characterization of the metabolome was achieved using two complementary platforms (GC × GC-MS, LC-QToF-MS), and metabolite identification was based on a comparison with in-house databases or curated external spectral libraries.

Results: In total, 127 metabolites could be identified with high certainty (confidence level 1 or 2) including sugars, amino acids, fatty acids, organic acids, and amines/amides but also secondary metabolites such as vanillin-related metabolites, flavonoids, and terpenoids. Ninty-eight metabolites showed significantly different intensities between the plant organs. Most strikingly, aglycons of flavonoids and vanillin-related metabolites were elevated in aerial roots, whereas its O-glycoside forms tended to be higher in leaves and/or internodes. This suggests that the more bioactive aglycones may accumulate where preferably needed, e.g. for defense against pathogens.

Conclusion: The results derived from the study substantially expand the knowledge regarding the vanilla metabolome forming a valuable basis for more targeted investigations in future studies, e.g. towards an optimization of vanilla plant cultivation.

简介非靶向代谢组学是一种强大的工具,它提供了系统了解代谢物水平定量变化的策略,尤其是在结合不同代谢组学平台时。香草是世界上最受欢迎的香料之一,源自兰花香草的荚果。然而,只有少数研究调查了香荚兰的代谢组,而且还没有针对叶片进行 LC-MS 或 GC-MS 代谢组学研究:该研究旨在全面描述 V. planifolia 不同器官(叶片、节间和气生根)的代谢组特征:使用两个互补平台(GC × GC-MS、LC-QToF-MS)对代谢组进行表征,代谢物的鉴定基于与内部数据库或外部光谱库的比较:结果:总共有 127 种代谢物可以非常确定地鉴定出来(置信度为 1 或 2),包括糖类、氨基酸、脂肪酸、有机酸、胺/酰胺以及次生代谢物,如香兰素相关代谢物、黄酮类化合物和萜类化合物。植物器官之间有 98 种代谢物的强度存在明显差异。最明显的是,黄酮类化合物和香兰素相关代谢物的苷元在气生根中含量较高,而其 O-糖苷形式在叶片和/或节间中含量较高。这表明,生物活性更强的苷元可能积聚在更需要的地方,例如用于抵御病原体:这项研究的结果大大扩展了人们对香草代谢组的了解,为今后开展更有针对性的研究奠定了宝贵的基础,例如优化香草植物的种植。
{"title":"Comprehensive metabolome characterization of leaves, internodes, and aerial roots of Vanilla planifolia by untargeted LC-MS and GC × GC-MS.","authors":"Falco Beer, Christoph H Weinert, Johannes Wellmann, Silke Hillebrand, Jakob Peter Ley, Sebastian T Soukup, Sabine E Kulling","doi":"10.1002/pca.3414","DOIUrl":"10.1002/pca.3414","url":null,"abstract":"<p><strong>Introduction: </strong>Untargeted metabolomics is a powerful tool that provides strategies for gaining a systematic understanding of quantitative changes in the levels of metabolites, especially when combining different metabolomic platforms. Vanilla is one of the world's most popular flavors originating from cured pods of the orchid Vanilla planifolia. However, only a few studies have investigated the metabolome of V. planifolia, and no LC-MS or GC-MS metabolomics studies with respect to leaves have been performed.</p><p><strong>Objective: </strong>The aim of the study was to comprehensively characterize the metabolome of different organs (leaves, internodes, and aerial roots) of V. planifolia.</p><p><strong>Material and methods: </strong>Characterization of the metabolome was achieved using two complementary platforms (GC × GC-MS, LC-QToF-MS), and metabolite identification was based on a comparison with in-house databases or curated external spectral libraries.</p><p><strong>Results: </strong>In total, 127 metabolites could be identified with high certainty (confidence level 1 or 2) including sugars, amino acids, fatty acids, organic acids, and amines/amides but also secondary metabolites such as vanillin-related metabolites, flavonoids, and terpenoids. Ninty-eight metabolites showed significantly different intensities between the plant organs. Most strikingly, aglycons of flavonoids and vanillin-related metabolites were elevated in aerial roots, whereas its O-glycoside forms tended to be higher in leaves and/or internodes. This suggests that the more bioactive aglycones may accumulate where preferably needed, e.g. for defense against pathogens.</p><p><strong>Conclusion: </strong>The results derived from the study substantially expand the knowledge regarding the vanilla metabolome forming a valuable basis for more targeted investigations in future studies, e.g. towards an optimization of vanilla plant cultivation.</p>","PeriodicalId":20095,"journal":{"name":"Phytochemical Analysis","volume":" ","pages":"30-51"},"PeriodicalIF":3.0,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11743222/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141734911","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Phytochemical Analysis
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