首页 > 最新文献

Physics in medicine and biology最新文献

英文 中文
Investigating the timing behavior of compton scattering in BGO for time-of-flight PET. 研究飞行时间PET在BGO中的康普顿散射时序行为。
IF 3.4 3区 医学 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2026-02-13 DOI: 10.1088/1361-6560/ae3eef
Minseok Yi, Daehee Lee, Alberto Gola, Stefano Merzi, Michele Penna, Simon R Cherry, Jae Sung Lee, Sun Il Kwon

Objective. Bismuth germanate (BGO) has regained attention as a promising material for hybrid Cherenkov/scintillation time-of-flight positron emission tomography (TOF-PET). While excellent timing performance has been demonstrated in single-crystal studies using prompt Cherenkov photons, practical pixelated detector modules introduce appreciable inter-crystal scattering (InterCS) events that can degrade timing accuracy. The objective of this work was to experimentally investigate the impact ofInterCSon Cherenkov-based timing in pixelated BGO detectors and to identify optimal timestamp selection strategies.Approach. A dual-pixel BGO detector was constructed and coupled to a segmented SiPM readout to enable spatially resolved energy and timing measurements. Events were classified into full-energy deposition (FED); primary crystal 511 keV absorption),InterCS, andpenetrationcategories using energy-weighted positioning. This experimental classification was validated using GATE simulations, which further revealed that intra-crystal scattering (IntraCS) accounted for more than 25% of the events experimentally classified asFED. Multiple timestamp selection strategies were evaluated, and prompt photon statistics were quantified by integrating the first 1 ns of the timing waveform.Main results. ForInterCSevents, selecting the earlier of the two timestamps yielded a coincidence timing resolution of 221 ps FWHM (831 ps FWTM) measured in coincidence with a LYSO:(Ce, Mg) reference detector, compared to 184 ps FWHM (603 ps FWTM) forFEDevents. Energy-based timestamp selection was found to be suboptimal. Prompt photon analysis showed a measurable reduction in early photon yield forInterCSevents, with an average of 4.73 detected photons in the first 1 ns, compared to 5.76 forFEDevents.Significance. these results demonstrate thatInterCSintroduces systematic timing degradation in pixelated BGO Cherenkov TOF-PET detectors through energy redistribution and reduced prompt photon statistics. The findings highlight the necessity of time-aware, per-pixel timestamp selection strategies to preserve optimal timing performance in realistic BGO-based TOF-PET systems operating in the presence of Compton scattering.

目的:锗酸铋(BGO)作为一种很有前途的混合切伦科夫/闪烁飞行时间正电子发射层析成像(TOF-PET)材料重新受到关注。虽然在使用提示切伦科夫光子的单晶研究中已经证明了出色的定时性能,但实际的像素化探测器模块会引入可观的晶体间散射(InterCS)事件,从而降低定时精度。本研究的目的是通过实验研究基于cherenkov的interson定时对像素化BGO探测器的影响,并确定最佳时间戳选择策略。方法:构建双像素BGO探测器,并将其与分段SiPM读出器耦合,以实现空间分辨能量和定时测量。使用能量加权定位将事件分为全能量沉积(FED;初级晶体511kev吸收)、InterCS和穿透三类。通过GATE模拟验证了这一实验分类,进一步表明晶体内散射(IntraCS)占实验分类为fed的事件的25%以上。对多个时间戳选择策略进行了评估,并通过积分时序波形的前1ns对提示光子统计进行了量化。 ;主要结果:对于截取,选择较早的两个时间戳产生了221 ps FWHM (831 ps FWTM)的符合时间分辨率,与LYSO:(Ce, Mg)参考探测器测量的符合时间分辨率相比,184 ps FWHM (603 ps FWTM)。发现基于能量的时间戳选择是次优的。即时光子分析显示,intersevents的早期光子产量显著降低,在前1ns平均检测到4.73个光子,而在前1ns平均检测到5.76个光子。意义:这些结果表明,晶体间散射通过能量再分配和减少的即时光子统计量,在像素化BGO Cherenkov TOF-PET探测器中引入了系统的时间退化。研究结果强调了在康普顿散射存在的情况下,采用时间感知、逐像素时间戳选择策略来保持现实的基于bgo的TOF-PET系统的最佳时序性能的必要性。
{"title":"Investigating the timing behavior of compton scattering in BGO for time-of-flight PET.","authors":"Minseok Yi, Daehee Lee, Alberto Gola, Stefano Merzi, Michele Penna, Simon R Cherry, Jae Sung Lee, Sun Il Kwon","doi":"10.1088/1361-6560/ae3eef","DOIUrl":"10.1088/1361-6560/ae3eef","url":null,"abstract":"<p><p><i>Objective</i>. Bismuth germanate (BGO) has regained attention as a promising material for hybrid Cherenkov/scintillation time-of-flight positron emission tomography (TOF-PET). While excellent timing performance has been demonstrated in single-crystal studies using prompt Cherenkov photons, practical pixelated detector modules introduce appreciable inter-crystal scattering (<i>InterCS</i>) events that can degrade timing accuracy. The objective of this work was to experimentally investigate the impact of<i>InterCS</i>on Cherenkov-based timing in pixelated BGO detectors and to identify optimal timestamp selection strategies.<i>Approach</i>. A dual-pixel BGO detector was constructed and coupled to a segmented SiPM readout to enable spatially resolved energy and timing measurements. Events were classified into full-energy deposition (<i>FED</i>); primary crystal 511 keV absorption),<i>InterCS</i>, and<i>penetration</i>categories using energy-weighted positioning. This experimental classification was validated using GATE simulations, which further revealed that intra-crystal scattering (<i>IntraCS</i>) accounted for more than 25% of the events experimentally classified as<i>FED</i>. Multiple timestamp selection strategies were evaluated, and prompt photon statistics were quantified by integrating the first 1 ns of the timing waveform.<i>Main results</i>. For<i>InterCS</i>events, selecting the earlier of the two timestamps yielded a coincidence timing resolution of 221 ps FWHM (831 ps FWTM) measured in coincidence with a LYSO:(Ce, Mg) reference detector, compared to 184 ps FWHM (603 ps FWTM) for<i>FED</i>events. Energy-based timestamp selection was found to be suboptimal. Prompt photon analysis showed a measurable reduction in early photon yield for<i>InterCS</i>events, with an average of 4.73 detected photons in the first 1 ns, compared to 5.76 for<i>FED</i>events.<i>Significance</i>. these results demonstrate that<i>InterCS</i>introduces systematic timing degradation in pixelated BGO Cherenkov TOF-PET detectors through energy redistribution and reduced prompt photon statistics. The findings highlight the necessity of time-aware, per-pixel timestamp selection strategies to preserve optimal timing performance in realistic BGO-based TOF-PET systems operating in the presence of Compton scattering.</p>","PeriodicalId":20185,"journal":{"name":"Physics in medicine and biology","volume":" ","pages":""},"PeriodicalIF":3.4,"publicationDate":"2026-02-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12902675/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146106524","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Truth-based physics informed estimation of material composition in spectral CT in terms of density and effective atomic number. 基于真理的物理告知估计材料成分在光谱CT在密度和有效原子序数方面。
IF 3.4 3区 医学 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2026-02-13 DOI: 10.1088/1361-6560/ae4284
Jainam H Valand, Mojtaba Zarei, Jayasai Rajagopal, Nicholas Felice, Joseph Y Cao, Kirti Magudia, Danielle E Kruse, Kevin R Kalisz, Ehsan Abadi, Ehsan Samei

Objective.Spectral computed tomography (CT) data from photon-counting CT (PCCT) enables material decomposition. Mechanistic approaches such as maximum likelihood estimation are noise sensitive. Deep learning alternatives mitigate this issue, but their accuracy remains limited due to lack of incorporation of underlying physics principles and lack of ground truth data. This study aims to develop and validate a physics-informed deep-learning model, trained on validated simulated data, to decompose spectral CT images into density (ρ)and effective atomic number (Zeff) maps.Methods.The training dataset included simulated abdominal PCCT scans from 32 human models with corresponding ground truth. The scans were obtained at two clinical dose levels, four detector energy thresholds, different iodinated contrast agent concentrations and reconstructed using three clinically-used kernels. A generative adversarial network (GAN) was trained with and without a physics-informed regularization loss to estimateρandZeffmaps. Model performance was evaluated on 16 computational phantoms and validated on 6 clinical cases. A reader study was performed on 30 image slices to assess the comparative performance ofρandZeffmaps to multi-rendered virtual monochromatic images (VMIs) for assessing liver lesion conspicuity.Main results.With physics-informed regularization, NRMSE of 1.29% and 0.68%, SSIM of 0.99 and 0.99, and PSNR of 29.8 dB and 29.04 dB were achieved. A maximum RMSE of 5.45% was achieved on clinical data. Reader study results showedρandZeffimages had higher conspicuity scores compared to VMIs (median: 4.52 vs 4.13; 95% CIs: [4.19, 4.52] vs [4.01, 4.31]). The study showed equivalent conspicuity between VMIs and material images within a ±0.5 margin, though the small sample limits generalization.Significance.This study demonstrates the feasibility of material decomposition using a physics-informed GAN model trained on realistic simulated data. The maps provided equivalent conspicuity under a clinically acceptable margin, with a significantly small number of images for interpretation.

目的:利用光子计数CT (PCCT)的光谱CT数据实现物质分解。机械方法,如最大似然估计(MLE)是噪声敏感的。深度学习替代方案缓解了这一问题,但由于缺乏基本物理原理的结合和缺乏基础真实数据,它们的准确性仍然有限。本研究旨在开发和验证一个基于物理的深度学习模型,该模型在经过验证的模拟数据上进行训练,将光谱CT图像分解为密度 (rho)和有效原子数(Zeff)图。方法:训练数据集包括来自32个人体模型的模拟腹部PCCT扫描,具有相应的基础真值。在两种临床剂量水平、四种探测器能量阈值、不同的碘造影剂浓度下获得扫描结果,并使用三种临床使用的核重建。生成对抗网络(GAN)在有和没有物理信息正则化损失的情况下进行训练,以估计ρ和Zeff映射。在16个计算模型上评估模型的性能,并在6个临床病例上进行验证。在30张图像切片上进行了一项读者研究,以评估ρ和Zeff映射在多渲染虚拟单色图像(vmi)上评估肝脏病变显著性的比较性能。 ;主要结果:经过物理信息正则化,NRMSE分别为1.29%和0.68%,SSIM分别为0.99和0.99,PSNR分别为29.8dB和29.04dB。临床数据的最大RMSE为5.45%。读者研究结果显示,ρ和Zeff图像的显著性评分高于VMIs(中位数:4.52比4.13;95% ci:[4.19, 4.52]比[4.01,4.31])。研究表明VMIs和材料图像之间的显著性在±0.5的范围内,尽管小样本限制了推广。意义:本研究证明了使用基于真实模拟数据训练的物理信息GAN模型进行材料分解的可行性。这些图在临床可接受的范围内提供了相当的显著性,用于解释的图像数量明显较少。 。
{"title":"Truth-based physics informed estimation of material composition in spectral CT in terms of density and effective atomic number.","authors":"Jainam H Valand, Mojtaba Zarei, Jayasai Rajagopal, Nicholas Felice, Joseph Y Cao, Kirti Magudia, Danielle E Kruse, Kevin R Kalisz, Ehsan Abadi, Ehsan Samei","doi":"10.1088/1361-6560/ae4284","DOIUrl":"10.1088/1361-6560/ae4284","url":null,"abstract":"<p><p><i>Objective.</i>Spectral computed tomography (CT) data from photon-counting CT (PCCT) enables material decomposition. Mechanistic approaches such as maximum likelihood estimation are noise sensitive. Deep learning alternatives mitigate this issue, but their accuracy remains limited due to lack of incorporation of underlying physics principles and lack of ground truth data. This study aims to develop and validate a physics-informed deep-learning model, trained on validated simulated data, to decompose spectral CT images into density (ρ)and effective atomic number (<i>Z</i><sub>eff</sub>) maps.<i>Methods.</i>The training dataset included simulated abdominal PCCT scans from 32 human models with corresponding ground truth. The scans were obtained at two clinical dose levels, four detector energy thresholds, different iodinated contrast agent concentrations and reconstructed using three clinically-used kernels. A generative adversarial network (GAN) was trained with and without a physics-informed regularization loss to estimate<i>ρ</i>and<i>Z</i><sub>eff</sub>maps. Model performance was evaluated on 16 computational phantoms and validated on 6 clinical cases. A reader study was performed on 30 image slices to assess the comparative performance of<i>ρ</i>and<i>Z</i><sub>eff</sub>maps to multi-rendered virtual monochromatic images (VMIs) for assessing liver lesion conspicuity.<i>Main results.</i>With physics-informed regularization, NRMSE of 1.29% and 0.68%, SSIM of 0.99 and 0.99, and PSNR of 29.8 dB and 29.04 dB were achieved. A maximum RMSE of 5.45% was achieved on clinical data. Reader study results showed<i>ρ</i>and<i>Z</i><sub>eff</sub>images had higher conspicuity scores compared to VMIs (median: 4.52 vs 4.13; 95% CIs: [4.19, 4.52] vs [4.01, 4.31]). The study showed equivalent conspicuity between VMIs and material images within a ±0.5 margin, though the small sample limits generalization.<i>Significance.</i>This study demonstrates the feasibility of material decomposition using a physics-informed GAN model trained on realistic simulated data. The maps provided equivalent conspicuity under a clinically acceptable margin, with a significantly small number of images for interpretation.</p>","PeriodicalId":20185,"journal":{"name":"Physics in medicine and biology","volume":" ","pages":""},"PeriodicalIF":3.4,"publicationDate":"2026-02-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146126116","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Roadmap towards personalized approaches and safety considerations in non-ionizing radiation: from dosimetry to therapeutic and diagnostic applications. 非电离辐射中个性化方法和安全考虑的路线图:从剂量学到治疗和诊断应用。
IF 3.4 3区 医学 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2026-02-13 DOI: 10.1088/1361-6560/ae22b8
Ilkka Laakso, Margarethus Marius Paulides, Sachiko Kodera, Seungyoung Ahn, Christopher L Brace, Marta Cavagnaro, Ji Chen, Zhi-De Deng, Valerio De Santis, Yinliang Diao, Lourdes Farrugia, Mauro Feliziani, Serena Fiocchi, Francesco Fioranelli, Takashi Hikage, Sergey Makaroff, Maya Mizuno, Alexander Opitz, Emma Pickwell-MacPherson, Punit Prakash, Dario B Rodrigues, Kensuke Sasaki, Takuya Sakamoto, Zachary Taylor, Hubregt J Visser, Desmond T B Yeo, Akimasa Hirata

This roadmap provides a comprehensive and forward-looking perspective on the individualized application and safety of non-ionizing radiation (NIR) dosimetry in diagnostic and therapeutic medicine. Covering a wide range of frequencies, i.e. from low-frequency to terahertz, this document provides an overview of the current state of the art and anticipates future research needs in selected key topics of NIR-based medical applications. It also emphasizes the importance of personalized dosimetry, rigorous safety evaluation, and interdisciplinary collaboration to ensure safe and effective integration of NIR technologies in modern therapy and diagnosis.

该路线图为诊断和治疗医学中非电离辐射(NIR)剂量学的个体化应用和安全性提供了全面和前瞻性的视角。该文件涵盖了广泛的频率范围,即从低频到太赫兹,概述了当前的技术状况,并预测了基于nir的医疗应用的选定关键主题的未来研究需求。它还强调了个性化剂量测定、严格的安全性评估和跨学科合作的重要性,以确保安全有效地将近红外技术整合到现代治疗和诊断中。
{"title":"Roadmap towards personalized approaches and safety considerations in non-ionizing radiation: from dosimetry to therapeutic and diagnostic applications.","authors":"Ilkka Laakso, Margarethus Marius Paulides, Sachiko Kodera, Seungyoung Ahn, Christopher L Brace, Marta Cavagnaro, Ji Chen, Zhi-De Deng, Valerio De Santis, Yinliang Diao, Lourdes Farrugia, Mauro Feliziani, Serena Fiocchi, Francesco Fioranelli, Takashi Hikage, Sergey Makaroff, Maya Mizuno, Alexander Opitz, Emma Pickwell-MacPherson, Punit Prakash, Dario B Rodrigues, Kensuke Sasaki, Takuya Sakamoto, Zachary Taylor, Hubregt J Visser, Desmond T B Yeo, Akimasa Hirata","doi":"10.1088/1361-6560/ae22b8","DOIUrl":"10.1088/1361-6560/ae22b8","url":null,"abstract":"<p><p>This roadmap provides a comprehensive and forward-looking perspective on the individualized application and safety of non-ionizing radiation (NIR) dosimetry in diagnostic and therapeutic medicine. Covering a wide range of frequencies, i.e. from low-frequency to terahertz, this document provides an overview of the current state of the art and anticipates future research needs in selected key topics of NIR-based medical applications. It also emphasizes the importance of personalized dosimetry, rigorous safety evaluation, and interdisciplinary collaboration to ensure safe and effective integration of NIR technologies in modern therapy and diagnosis.</p>","PeriodicalId":20185,"journal":{"name":"Physics in medicine and biology","volume":" ","pages":""},"PeriodicalIF":3.4,"publicationDate":"2026-02-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12902664/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145574186","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
DBFANet: a dual-branch feature alignment network for automated detection of breast cancer bone metastasis. DBFANet:用于乳腺癌骨转移自动检测的双分支特征对齐网络。
IF 3.4 3区 医学 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2026-02-12 DOI: 10.1088/1361-6560/ae4166
Gang Liu, Qiang Lin, Xianwu Zeng, Yongchun Cao, Tongtong Li, Caihong Liu, Zhengqi Cai, Xiaodi Huang

Objective.Bone scan imaging for the detection of bone metastasis of breast cancer has been widely adopted; however, noise, anatomy superimposition, and small size for early lesions will severely affect its prediction performance. In this work, we propose a new framework with two major contributions to solve the main problems existing in current deep-learning-based approaches.Approach.In this study, we put forward a new model called the dual branch feature alignment network (DBFANet) for automated breast cancer bone metastases detection in bone scintigraphy. DBFA-net adopts a dual-branch CNN-Transformer structure: the CNN branch focuses on the local details, while the Transformer branch learns the global context. In addition, we design a feature alignment module (FRAT), which employs the bi-directional cross-attention mechanism for the complementary feature from two branches. Moreover, we propose an enhanced multi-scale attention module (EMSA) based on the squeeze-and-excitation (SE) block for stronger multi-scale lesion representations with less background noise suppression.Main results.We validated our proposed model based on a bone scintigraphy dataset containing 5092 images. In terms of bone metastasis prediction, DBFANet achieved an accuracy, precision, and recall value of 93.1%, 84.6%, and 84.7%, respectively, all superior to previous models (such as ResNet-50, EfficientNet-V2, and MaxViT). The ablation study has shown that both FRAT and EMSA have individual effectiveness and complementary benefits. Finally, additional external validation was performed on a publicly available bone scintigraphy dataset (BS-80K).Significance.DBFANet shows the highest detection performance for bone metastasis detection from multiview bone scintigraphy images with imbalanced classes and noise in the image, and the feature alignment with enhanced multiscale attention of DBFANet provides a useful and precise tool for bone metastasis diagnosis in a nuclear medicine imaging scenario.

目的:骨扫描成像检测乳腺癌骨转移已被广泛采用;然而,噪声、解剖重叠、早期病变体积小等因素会严重影响其预测效果。在这项工作中,我们提出了一个新的框架,主要有两个方面的贡献,以解决当前基于深度学习的方法中存在的主要问题。方法:在这项研究中,我们提出了一个新的模型,称为双分支特征对齐网络(DBFANet),用于骨扫描中乳腺癌骨转移的自动检测。DBFA-net采用双分支CNN-变压器结构:CNN分支关注局部细节,而变压器分支学习全局上下文。此外,我们设计了一个特征对齐模块(FRAT),该模块采用双向交叉注意机制来处理两个分支的互补特征。此外,我们提出了一种基于挤压和激发(SE)块的增强多尺度注意模块(EMSA),以获得更强的多尺度病变表征,同时减少背景噪声抑制。 ;主要结果:我们基于包含5,092张图像的骨显像数据集验证了我们提出的模型。在骨转移预测方面,DBFANet的准确率、精密度和召回率分别为93.1%、84.6%和84.7%,均优于先前的模型(如ResNet-50、EfficientNet-V2和MaxViT)。消融研究表明,FRAT和EMSA都具有个体有效性和互补益处。最后,在公开可用的骨闪烁成像数据集(BS-80K)上进行了额外的外部验证。意义:DBFANet对具有不平衡分类和噪声的多视图骨闪烁成像图像的骨转移检测表现出最高的检测性能,DBFANet的特征对准增强了多尺度关注,为核医学成像场景下的骨转移诊断提供了有用和精确的工具。
{"title":"DBFANet: a dual-branch feature alignment network for automated detection of breast cancer bone metastasis.","authors":"Gang Liu, Qiang Lin, Xianwu Zeng, Yongchun Cao, Tongtong Li, Caihong Liu, Zhengqi Cai, Xiaodi Huang","doi":"10.1088/1361-6560/ae4166","DOIUrl":"10.1088/1361-6560/ae4166","url":null,"abstract":"<p><p><i>Objective.</i>Bone scan imaging for the detection of bone metastasis of breast cancer has been widely adopted; however, noise, anatomy superimposition, and small size for early lesions will severely affect its prediction performance. In this work, we propose a new framework with two major contributions to solve the main problems existing in current deep-learning-based approaches.<i>Approach.</i>In this study, we put forward a new model called the dual branch feature alignment network (DBFANet) for automated breast cancer bone metastases detection in bone scintigraphy. DBFA-net adopts a dual-branch CNN-Transformer structure: the CNN branch focuses on the local details, while the Transformer branch learns the global context. In addition, we design a feature alignment module (FRAT), which employs the bi-directional cross-attention mechanism for the complementary feature from two branches. Moreover, we propose an enhanced multi-scale attention module (EMSA) based on the squeeze-and-excitation (SE) block for stronger multi-scale lesion representations with less background noise suppression.<i>Main results.</i>We validated our proposed model based on a bone scintigraphy dataset containing 5092 images. In terms of bone metastasis prediction, DBFANet achieved an accuracy, precision, and recall value of 93.1%, 84.6%, and 84.7%, respectively, all superior to previous models (such as ResNet-50, EfficientNet-V2, and MaxViT). The ablation study has shown that both FRAT and EMSA have individual effectiveness and complementary benefits. Finally, additional external validation was performed on a publicly available bone scintigraphy dataset (BS-80K).<i>Significance.</i>DBFANet shows the highest detection performance for bone metastasis detection from multiview bone scintigraphy images with imbalanced classes and noise in the image, and the feature alignment with enhanced multiscale attention of DBFANet provides a useful and precise tool for bone metastasis diagnosis in a nuclear medicine imaging scenario.</p>","PeriodicalId":20185,"journal":{"name":"Physics in medicine and biology","volume":" ","pages":""},"PeriodicalIF":3.4,"publicationDate":"2026-02-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146113986","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Regional ventilation imaging in normal and bronchoconstrictedin vivorabbit lungs using dynamic shuttle mode Xe-enhanced DECT imaging. 动态穿梭模式x增强DECT成像在正常和支气管收缩兔肺中的局部通气成像。
IF 3.4 3区 医学 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2026-02-12 DOI: 10.1088/1361-6560/ae4164
Emma Verelst, Sam Bayat, Sylvia Verbanck, Gert Van Gompel, Johan de Mey, Nico Buls

Objective.To investigate dynamic shuttle-mode xenon (Xe)-enhanced dual-energy CT (Xe-DECT) imaging for a regional assessment of ventilation inin vivorabbit lungs.Approach.Four mechanically ventilated rabbits were scanned during the washout of a 70% xenon in 30% oxygen gas mixture using dynamic shuttle-mode DECT at baseline and during methacholine (MCh)-induced bronchoconstriction (post-MCh). Material decomposition was applied to generate xenon and tissue density images (mg ml-1). A tissue-based correction was used to isolate the xenon concentration (CXe) in the gas phase of the xenon density images. The resultantCXeimages were used to investigate regional ventilation defects (VDs) by comparing the VD fraction (VDF, expressed as percentage) between baseline and post-MCh conditions. Additionally, regional ventilation efficiency within the VDs and surrounding (non-VD) areas was quantified as specific ventilation (sV˙in min-1). Ventilation was also qualitatively assessed by evaluating ventilation distributions during washout.Main results.MCh-induced bronchoconstriction resulted in an increase in VDF. The average VDF at baseline was 13.8 ± 8.5%, compared to an average post-MCh VDF of 29.6 ± 7.7%,p =0.026. The VDs at baseline did not reveal a reduced ventilation efficiency (sV˙VD:8.4 ± 2.7 min-1), compared to non-VD areas (sV˙non-VD:7.0 ± 3.1 min-1),p =0.306. In contrast, MCh-induced VDs were found to have a reduced ventilation efficiency (sV˙VD:4.9 ± 2.3 min-1), compared to non-VD areas (sV˙non-VD: 6.4 ± 2.3 min-1),p =0.004. Significance.Dynamic shuttle-mode Xe-DECT during washout enabled regional evaluation of ventilation in healthy and pathologicalin vivorabbit lungs. As traditional lung function tests offer only global assessments of respiratory impairment, there is a growing interest in pulmonary functional imaging to enable quantitative evaluation of regional lung function.

目的研究动态穿梭模式氙气(Xe)增强双能CT (Xe-DECT)成像对兔体内肺通气的局部评估。方法在基线和甲基胆碱(MCh)诱导的支气管收缩(MCh后)期间,使用动态穿梭模式DECT扫描4只机械通气兔。材料分解生成氙和组织密度图像(mg/mL)。采用基于组织的校正方法分离氙密度图像气相中的氙浓度(CXe)。通过比较基线和mch后条件下的VD分数(VDF,以百分比表示),所得的CXe图像用于研究区域通风缺陷(VDs)。此外,vd内和周围(非vd)区域的区域通风效率被量化为比通风量(sV / min-1)。通过评估冲洗期间的通风分布,还对通风进行了定性评估。主要结果:mch所致支气管收缩导致VDF升高。基线时平均VDF为13.8%±8.5%,而mch后平均VDF为29.6%±7.7%,p = 0.026。与非vd区(〖sV〗_(非vd): 7.0±3.1 min-1)相比,基线VDs区通气效率(〖sV〗_(非vd): 8.4±2.7 min-1)未出现降低,p = 0.306。与非vd区相比,mch诱导的VDs通气效率(〖sV〗_(非vd): 6.4±2.3 min-1)降低(〖sV〗_(非vd): 4.9±2.3 min-1), p = 0.004. ;显著性 ;洗空期间动态往返模式x - dect可对健康和病理兔体内肺通气进行区域评估。由于传统的肺功能检查只能提供呼吸损伤的全面评估,因此人们对肺功能成像越来越感兴趣,以便能够定量评估区域肺功能。
{"title":"Regional ventilation imaging in normal and bronchoconstricted<i>in vivo</i>rabbit lungs using dynamic shuttle mode Xe-enhanced DECT imaging.","authors":"Emma Verelst, Sam Bayat, Sylvia Verbanck, Gert Van Gompel, Johan de Mey, Nico Buls","doi":"10.1088/1361-6560/ae4164","DOIUrl":"10.1088/1361-6560/ae4164","url":null,"abstract":"<p><p><i>Objective.</i>To investigate dynamic shuttle-mode xenon (Xe)-enhanced dual-energy CT (Xe-DECT) imaging for a regional assessment of ventilation in<i>in vivo</i>rabbit lungs.<i>Approach.</i>Four mechanically ventilated rabbits were scanned during the washout of a 70% xenon in 30% oxygen gas mixture using dynamic shuttle-mode DECT at baseline and during methacholine (MCh)-induced bronchoconstriction (post-MCh). Material decomposition was applied to generate xenon and tissue density images (mg ml<sup>-1</sup>). A tissue-based correction was used to isolate the xenon concentration (<i>C</i><sub>Xe</sub>) in the gas phase of the xenon density images. The resultant<i>C</i><sub>Xe</sub>images were used to investigate regional ventilation defects (VDs) by comparing the VD fraction (VDF, expressed as percentage) between baseline and post-MCh conditions. Additionally, regional ventilation efficiency within the VDs and surrounding (non-VD) areas was quantified as specific ventilation (sV˙in min<sup>-1</sup>). Ventilation was also qualitatively assessed by evaluating ventilation distributions during washout.<i>Main results.</i>MCh-induced bronchoconstriction resulted in an increase in VDF. The average VDF at baseline was 13.8 ± 8.5%, compared to an average post-MCh VDF of 29.6 ± 7.7%,<i>p =</i>0.026. The VDs at baseline did not reveal a reduced ventilation efficiency (sV˙VD:8.4 ± 2.7 min<sup>-1</sup>), compared to non-VD areas (sV˙non-VD:7.0 ± 3.1 min<sup>-1</sup>),<i>p =</i>0.306. In contrast, MCh-induced VDs were found to have a reduced ventilation efficiency (sV˙VD:4.9 ± 2.3 min<sup>-1</sup>), compared to non-VD areas (sV˙non-VD: 6.4 ± 2.3 min<sup>-1</sup>),<i>p =</i>0.004<i>. Significance.</i>Dynamic shuttle-mode Xe-DECT during washout enabled regional evaluation of ventilation in healthy and pathological<i>in vivo</i>rabbit lungs. As traditional lung function tests offer only global assessments of respiratory impairment, there is a growing interest in pulmonary functional imaging to enable quantitative evaluation of regional lung function.</p>","PeriodicalId":20185,"journal":{"name":"Physics in medicine and biology","volume":" ","pages":""},"PeriodicalIF":3.4,"publicationDate":"2026-02-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146113693","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A tumor control probability model for elective nodal irradiation to balance toxicity and regional tumor control in treatment plan optimization for head-and-neck squamous cell carcinoma. 头颈部鳞状细胞癌治疗方案优选中选择性淋巴结照射平衡毒性和局部肿瘤控制的肿瘤控制概率模型。
IF 3.4 3区 医学 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2026-02-12 DOI: 10.1088/1361-6560/ae4165
Kristoffer Moos, Muriel Baldinger, Yoel Perez Haas, Roman Ludwig, Esmee Looman, Panagiotis Balermpas, Stine Sofia Korreman, Jan Unkelbach

Objective.Elective nodal irradiation (ENI) is common clinical practice for many cancer sites including head-and-neck squamous cell carcinoma (HNSCC). ENI is performed to increase regional tumor control probability (TCP) but contributes to normal tissue complication probability (NTCP). We aim to improve the tradeoff between NTCP and regional TCP.Approach.Based on a previously developed model of lymphatic tumor progression for HNSCC, we estimate the probability of occult lymph node metastases in clinically negative lymph node levels (LNLs). We present a TCP model that predicts the regional TCP in the LNL irradiated with an arbitrary dose distribution. The TCP model is used for treatment plan optimization together with NTCP models.Main results.The approach is exemplified using three different HNSCC cases, considering the tradeoff between 1) xerostomia and ENI of contralateral LNL II, 2) dysphagia and ENI of LNL III, and 3) hypothyroidism and ENI of LNL IV. We show that NTCP may be lowered along with only minor reductions in regional TCP by compromising coverage of the LNL near relevant organs at risk.Significance.We present a method to control the trade-off between regional tumor control and risk of normal tissue complications in treatment plan optimization and demonstrate its application in a clinically relevant context.

目的:选择性淋巴结照射(ENI)是包括头颈部鳞状细胞癌(HNSCC)在内的许多癌症部位的常见临床做法。ENI是为了增加局部肿瘤控制(TCP),但会增加正常组织并发症的概率(NTCP)。我们的目标是改善NTCP和区域TCP之间的权衡。方法:基于先前开发的HNSCC淋巴肿瘤进展模型,我们估计临床阴性淋巴结水平(LNLs)中隐匿淋巴结转移的概率。我们提出了一个预测任意剂量分布辐照下LNL区域TCP的TCP模型。采用TCP模型和NTCP模型对治疗方案进行优化。主要结果:我们说明了典型的HNSCC患者的方法,考虑到1)对侧LNL II的口干和ENI, 2) LNL III的吞咽困难和ENI,以及3)甲状腺功能减退和LNL IV的ENI之间的权衡。我们表明,NTCP可能会降低,而区域TCP只有轻微的减少,通过损害相关器官附近LNL的覆盖。意义:我们提出了一种在治疗方案优化中考虑肿瘤控制和正常组织并发症风险之间权衡的方法,并证明了其在临床相关背景下的应用。
{"title":"A tumor control probability model for elective nodal irradiation to balance toxicity and regional tumor control in treatment plan optimization for head-and-neck squamous cell carcinoma.","authors":"Kristoffer Moos, Muriel Baldinger, Yoel Perez Haas, Roman Ludwig, Esmee Looman, Panagiotis Balermpas, Stine Sofia Korreman, Jan Unkelbach","doi":"10.1088/1361-6560/ae4165","DOIUrl":"10.1088/1361-6560/ae4165","url":null,"abstract":"<p><p><i>Objective.</i>Elective nodal irradiation (ENI) is common clinical practice for many cancer sites including head-and-neck squamous cell carcinoma (HNSCC). ENI is performed to increase regional tumor control probability (TCP) but contributes to normal tissue complication probability (NTCP). We aim to improve the tradeoff between NTCP and regional TCP.<i>Approach.</i>Based on a previously developed model of lymphatic tumor progression for HNSCC, we estimate the probability of occult lymph node metastases in clinically negative lymph node levels (LNLs). We present a TCP model that predicts the regional TCP in the LNL irradiated with an arbitrary dose distribution. The TCP model is used for treatment plan optimization together with NTCP models.<i>Main results.</i>The approach is exemplified using three different HNSCC cases, considering the tradeoff between 1) xerostomia and ENI of contralateral LNL II, 2) dysphagia and ENI of LNL III, and 3) hypothyroidism and ENI of LNL IV. We show that NTCP may be lowered along with only minor reductions in regional TCP by compromising coverage of the LNL near relevant organs at risk.<i>Significance.</i>We present a method to control the trade-off between regional tumor control and risk of normal tissue complications in treatment plan optimization and demonstrate its application in a clinically relevant context.</p>","PeriodicalId":20185,"journal":{"name":"Physics in medicine and biology","volume":" ","pages":""},"PeriodicalIF":3.4,"publicationDate":"2026-02-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146114011","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Generative deep learning synthesizes high signal-to-noise ratio sensitivity maps for PET from low count direct normalization data. 生成式深度学习从低计数直接归一化数据中合成PET的高信噪比灵敏度图。
IF 3.4 3区 医学 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2026-02-12 DOI: 10.1088/1361-6560/ae3ec6
Mojtaba Jafaritadi, Andrew Groll, Myungheon Chin, Garry Chinn, Jonathan Fisher, Derek Innes, Craig S Levin

Objective.An accurate and precise normalization procedure is essential to correct for variations in detector efficiency in reconstructed positron emission tomography (PET) images. Direct normalization is a conventional approach that requires a large number of counts per line of response from a known normalization source, which is time-consuming due to the need to acquire very high statistics with a reasonable source strength that does not saturate the system.Approach.To address the challenge of acquiring high signal-to-noise ratio (SNR) PET sensitivity maps efficiently, particularly with the often relatively low-count direct normalization data, this work develops a novel PET data processing and image reconstruction pipeline. This framework integrates sensitivity map features with generative modeling to synthesize high-quality maps, significantly reducing acquisition time while ensuring accurate and efficient normalization. Key contributions comprise a conditional attention-guided generative adversarial network that preserves the geometric and detector-specific characteristics of sensitivity maps, a robust assessment framework to verify synthesized map plausibility, and a comprehensive evaluation of the model's performance across a range of acquisition and scanner conditions.Main Results.Quantitative evaluations were performed by testing the model on totally unseen normalization data, acquired to reconstruct images of a Hoffman brain phantom, a contrast phantom, and a uniform cylinder phantom. This evaluation used high-count, low-count (1%-15% of high count scan), and synthetic high-count sensitivity maps. The Hoffman brain image volume normalized using a synthetic sensitivity map with 15% count statistics as input produced results that closely matched that using the high count normalization data, with peak SNR (PSNR), structural similarity index measure (SSIM), and normalized root mean square error (NRMSE) values (mean ± standard error) of 30.68 ± 0.31, 0.95 ± 0.00, and 0.35 ± 0.00, respectively. In comparison, the unprocessed sensitivity map with 15% count statistics yielded substantially worse PSNR, SSIM, and NRMSE values of 15.93 ± 0.43, 0.54 ± 0.01, and 1.84 ± 0.03, respectively.Significance.This novel, fast, and effective approach enables high SNR direct normalization of PET image volumes through deep learning using synthetic correction factors obtained from a short normalization scan.

目标。在正电子发射断层扫描(PET)重建图像中,精确的归一化过程是纠正探测器效率变化的关键。直接归一化是一种传统的方法,它需要从已知的归一化源中获得大量的每行响应计数,这是耗时的,因为需要以合理的源强度获得非常高的统计数据,而不会使系统饱和。方法:为了解决有效获取高信噪比(SNR) PET灵敏度图的挑战,特别是对于通常相对较低计数的直接归一化数据,本工作开发了一种新的PET数据处理和图像重建管道。该框架将敏感性地图特征与生成建模相结合,合成高质量的地图,在确保准确高效归一化的同时显著减少了采集时间。主要贡献包括一个条件注意引导的生成对抗网络,该网络保留了敏感性地图的几何和探测器特定特征,一个强大的评估框架,用于验证合成地图的合理性,以及对模型在一系列采集和扫描仪条件下的性能进行全面评估。主要的结果。通过在完全看不见的归一化数据上测试模型来进行定量评估,这些数据用于重建霍夫曼脑幻像、对比幻像和均匀圆柱体幻像的图像。该评估使用高计数、低计数(1%-15%的高计数扫描)和合成高计数灵敏度图。霍夫曼脑图像体积归一化的结果与使用高计数归一化数据的结果非常接近,峰值信噪比(PSNR)、结构相似指数测量(SSIM)和归一化均方根误差(NRMSE)值(平均±标准误差)分别为30.68±0.31、0.95±0.00和0.35±0.00。相比之下,未处理的敏感度图具有15%计数统计量,其PSNR、SSIM和NRMSE值分别为15.93±0.43、0.54±0.01和1.84±0.03,明显更差。意义:这种新颖、快速、有效的方法通过深度学习,利用短时间归一化扫描获得的合成校正因子,实现了PET图像体积的高信噪比直接归一化。
{"title":"Generative deep learning synthesizes high signal-to-noise ratio sensitivity maps for PET from low count direct normalization data.","authors":"Mojtaba Jafaritadi, Andrew Groll, Myungheon Chin, Garry Chinn, Jonathan Fisher, Derek Innes, Craig S Levin","doi":"10.1088/1361-6560/ae3ec6","DOIUrl":"https://doi.org/10.1088/1361-6560/ae3ec6","url":null,"abstract":"<p><p><i>Objective.</i>An accurate and precise normalization procedure is essential to correct for variations in detector efficiency in reconstructed positron emission tomography (PET) images. Direct normalization is a conventional approach that requires a large number of counts per line of response from a known normalization source, which is time-consuming due to the need to acquire very high statistics with a reasonable source strength that does not saturate the system.<i>Approach.</i>To address the challenge of acquiring high signal-to-noise ratio (SNR) PET sensitivity maps efficiently, particularly with the often relatively low-count direct normalization data, this work develops a novel PET data processing and image reconstruction pipeline. This framework integrates sensitivity map features with generative modeling to synthesize high-quality maps, significantly reducing acquisition time while ensuring accurate and efficient normalization. Key contributions comprise a conditional attention-guided generative adversarial network that preserves the geometric and detector-specific characteristics of sensitivity maps, a robust assessment framework to verify synthesized map plausibility, and a comprehensive evaluation of the model's performance across a range of acquisition and scanner conditions.<i>Main Results.</i>Quantitative evaluations were performed by testing the model on totally unseen normalization data, acquired to reconstruct images of a Hoffman brain phantom, a contrast phantom, and a uniform cylinder phantom. This evaluation used high-count, low-count (1%-15% of high count scan), and synthetic high-count sensitivity maps. The Hoffman brain image volume normalized using a synthetic sensitivity map with 15% count statistics as input produced results that closely matched that using the high count normalization data, with peak SNR (PSNR), structural similarity index measure (SSIM), and normalized root mean square error (NRMSE) values (mean ± standard error) of 30.68 ± 0.31, 0.95 ± 0.00, and 0.35 ± 0.00, respectively. In comparison, the unprocessed sensitivity map with 15% count statistics yielded substantially worse PSNR, SSIM, and NRMSE values of 15.93 ± 0.43, 0.54 ± 0.01, and 1.84 ± 0.03, respectively.<i>Significance.</i>This novel, fast, and effective approach enables high SNR direct normalization of PET image volumes through deep learning using synthetic correction factors obtained from a short normalization scan.</p>","PeriodicalId":20185,"journal":{"name":"Physics in medicine and biology","volume":"71 3","pages":""},"PeriodicalIF":3.4,"publicationDate":"2026-02-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146166431","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Reinforcement learning-guided segment anything model for MRI prostate and dominant intraprostatic lesions auto-segmentation. 强化学习引导的MRI前列腺和显性前列腺内病变自动分割模型。
IF 3.4 3区 医学 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2026-02-12 DOI: 10.1088/1361-6560/ae4287
Jingchu Chen, Mingzhe Hu, Mojtaba Safari, Ryan Sanford, Jie Ding, Beth Ghavidel, Eric Elder, Justin Roper, Richard L J Qiu, Xiaofeng Yang

Objective. Accurate segmentation of the prostate and dominant intraprostatic lesions (DILs) on magnetic resonance imaging (MRI) is important for prostate cancer radiation therapy treatment planning and targeted dose escalation. However, DIL segmentation remains challenging due to small datasets, institutional bias, and variable imaging protocols. Although the segment anything model (SAM) has shown promise in medical image segmentation, most prior work depends on manual prompts. This study developed a fully automated pipeline that combines localization with a fine-tuned SAM model to segment the prostate and DIL.Approach. Two datasets were utilized: the PI-CAI dataset, comprising 1476 patients, and the cancer imaging archive dataset, comprising 803 patients. The pipeline consisted of two stages: (1) a reinforcement learning-based localization network predicted bounding boxes as segmentation inputs, and (2) a fine-tuned SAM model performed segmentation. Model performance was evaluated using the dice similarity coefficient (DSC), intersection over union (IoU), and detection rates, with additional analysis based on lesion volumes.Main results. The proposed method achieved a mean and median DSC of 0.896 ± 0.070 and 0.915, and an IoU of 0.818 ± 0.100 and 0.844 for prostate segmentation. For DIL segmentation, the mean and median DSC were 0.592 ± 0.192 and 0.636, IoU of 0.446 ± 0.190 and 0.466, with a detection rate of 89%. Four DIL groups were created based on lesion volume percentile. The mean/median DSC and IoU for each volume group are as follows: 0.5-1.0 cubic centimeters (cc): 0.555 ± 0.201/0.562 & 0.414 ± 0.205/0.391; 1.0-1.8 cc: 0.603 ± 0.185/0.660 & 0.454 ± 0.180/0.492; 1.8-4.0 cc: 0.588 ± 0.183/0.627 & 0.439 ± 0.174/0.456; >4.0 cc: 0.621 ± 0.197/0.669 & 0.477 ± 0.197/0.503.Significance. This study presented a fully automated prostate and DIL segmentation framework on MRI by integrating a localization network with fine-tuned SAM. The method achieved robust performance across large multi-institutional datasets and diverse lesion shapes. It shows strong potential for application to clinical workflows for prostate cancer radiation therapy planning and treatment.

目的磁共振成像(MRI)准确分割前列腺和优势前列腺内病变(DILs)对前列腺癌放射治疗计划和靶向剂量增加具有重要意义。然而,由于数据集小、机构偏见和不同的成像方案,DIL分割仍然具有挑战性。尽管任意分割模型(SAM)在医学图像分割中显示出前景,但大多数先前的工作依赖于人工提示。本研究开发了一种完全自动化的管道,将定位与微调的SAM模型相结合,以分割前列腺和DIL。 ;方法 ;使用了两个数据集:PI-CAI数据集,包括1,476名患者,以及癌症成像档案数据集,包括803名患者。该流程包括两个阶段:(1)基于强化学习的定位网络预测边界框作为分割输入,(2)微调的SAM模型进行分割。采用Dice Similarity Coefficient (DSC)、Intersection over Union (IoU)和检出率对模型性能进行评价,并对病变体积进行分析。主要结果:该方法对前列腺分割的DSC均值和中位数分别为0.896±0.070和0.915,IoU均值和中位数分别为0.818±0.100和0.844。DIL分割的DSC均值和中位数分别为0.592±0.192和0.636,IoU均值和中位数分别为0.446±0.190和0.466,检出率为89%。根据病灶体积百分位数分为4个DIL组。各容积组DSC和IoU的平均值/中位数分别为:0.5-1.0立方厘米(cc): 0.555±0.201/0.562和0.414±0.205/0.391;1.0 - -1.8 cc: 0.603±0.185/0.660 & 0.454±0.180/0.492;1.8 - -4.0 cc: 0.588±0.183/0.627 & 0.439±0.174/0.456;>4.0 cc: 0.621±0.197/0.669 & 0.477±0.197/0.503。本研究通过整合定位网络和微调SAM,在MRI上提出了一个全自动前列腺和DIL分割框架。该方法在大型多机构数据集和不同病变形状中具有鲁棒性。它在前列腺癌放射治疗计划和治疗的临床工作流程中显示出强大的应用潜力。
{"title":"Reinforcement learning-guided segment anything model for MRI prostate and dominant intraprostatic lesions auto-segmentation.","authors":"Jingchu Chen, Mingzhe Hu, Mojtaba Safari, Ryan Sanford, Jie Ding, Beth Ghavidel, Eric Elder, Justin Roper, Richard L J Qiu, Xiaofeng Yang","doi":"10.1088/1361-6560/ae4287","DOIUrl":"10.1088/1361-6560/ae4287","url":null,"abstract":"<p><p><i>Objective</i>. Accurate segmentation of the prostate and dominant intraprostatic lesions (DILs) on magnetic resonance imaging (MRI) is important for prostate cancer radiation therapy treatment planning and targeted dose escalation. However, DIL segmentation remains challenging due to small datasets, institutional bias, and variable imaging protocols. Although the segment anything model (SAM) has shown promise in medical image segmentation, most prior work depends on manual prompts. This study developed a fully automated pipeline that combines localization with a fine-tuned SAM model to segment the prostate and DIL.<i>Approach</i>. Two datasets were utilized: the PI-CAI dataset, comprising 1476 patients, and the cancer imaging archive dataset, comprising 803 patients. The pipeline consisted of two stages: (1) a reinforcement learning-based localization network predicted bounding boxes as segmentation inputs, and (2) a fine-tuned SAM model performed segmentation. Model performance was evaluated using the dice similarity coefficient (DSC), intersection over union (IoU), and detection rates, with additional analysis based on lesion volumes.<i>Main results</i>. The proposed method achieved a mean and median DSC of 0.896 ± 0.070 and 0.915, and an IoU of 0.818 ± 0.100 and 0.844 for prostate segmentation. For DIL segmentation, the mean and median DSC were 0.592 ± 0.192 and 0.636, IoU of 0.446 ± 0.190 and 0.466, with a detection rate of 89%. Four DIL groups were created based on lesion volume percentile. The mean/median DSC and IoU for each volume group are as follows: 0.5-1.0 cubic centimeters (cc): 0.555 ± 0.201/0.562 & 0.414 ± 0.205/0.391; 1.0-1.8 cc: 0.603 ± 0.185/0.660 & 0.454 ± 0.180/0.492; 1.8-4.0 cc: 0.588 ± 0.183/0.627 & 0.439 ± 0.174/0.456; >4.0 cc: 0.621 ± 0.197/0.669 & 0.477 ± 0.197/0.503.<i>Significance</i>. This study presented a fully automated prostate and DIL segmentation framework on MRI by integrating a localization network with fine-tuned SAM. The method achieved robust performance across large multi-institutional datasets and diverse lesion shapes. It shows strong potential for application to clinical workflows for prostate cancer radiation therapy planning and treatment.</p>","PeriodicalId":20185,"journal":{"name":"Physics in medicine and biology","volume":" ","pages":""},"PeriodicalIF":3.4,"publicationDate":"2026-02-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146126087","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The long and winding road of radiomics: learnings from two meta-analyses of the radiomics quality score. 放射组学的漫长曲折之路:从放射组学质量评分的两个荟萃分析中学到的教训。
IF 3.4 3区 医学 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2026-02-11 DOI: 10.1088/1361-6560/ae36e0
Nathaniel Barry, Jake Kendrick, Kaylee Molin, Suning Li, Pejman Rowshanfarzad, Ghulam Mubashar Hassan, Jason Dowling, Jeremy S L Ong, Paul M Parizel, Michael S Hofman, Burak Kocak, Renato Cuocolo, Martin A Ebert

The high-throughput extraction of radiomics features from medical images for predictive modelling holds great promise to improve the clinical management of patients. Previous meta-analyses into the radiomics quality score (RQS) applied in the literature have shown that after more than a decade of investigation, issues with workflow standardisation, model reproducibility, validation, and data accessibility persist and impede the clinical translation of radiomics-based models. These systematic findings have informed a timely review of the best practices and pitfalls to avoid within radiomics and predictive modelling, with a focus on realistic radiomics modelling in the context of limited sample sizes. Each section covers a radiomics topic that encompasses one or more RQS criteria and is broken into subsections as follows: (1) a discussion of the background and recommendations on the respective topic, (2) key findings from our meta-analyses and discovered pitfalls, and (3) a succinct list of actionable items that reflect best practice. New and emerging quality appraisal tools and the future direction of radiomics are also discussed.

从医学图像中高通量提取放射组学特征用于预测建模,对改善患者的临床管理具有很大的希望。先前对文献中应用的放射组学质量评分(RQS)的荟萃分析表明,经过十多年的调查,工作流程标准化、模型可重复性、验证和数据可访问性等问题仍然存在,并阻碍了基于放射组学的模型的临床翻译。这些系统的发现及时回顾了放射组学和预测建模中的最佳实践和陷阱,重点是在有限样本量的背景下进行现实放射组学建模。每个部分涵盖一个放射组学主题,包含一个或多个RQS标准,并分为以下小节:1)讨论各自主题的背景和建议,2)我们的荟萃分析的主要发现和发现的陷阱,以及3)反映最佳实践的可操作项目的简洁列表。本文还讨论了新的和新兴的质量评估工具以及放射组学的未来发展方向。
{"title":"The long and winding road of radiomics: learnings from two meta-analyses of the radiomics quality score.","authors":"Nathaniel Barry, Jake Kendrick, Kaylee Molin, Suning Li, Pejman Rowshanfarzad, Ghulam Mubashar Hassan, Jason Dowling, Jeremy S L Ong, Paul M Parizel, Michael S Hofman, Burak Kocak, Renato Cuocolo, Martin A Ebert","doi":"10.1088/1361-6560/ae36e0","DOIUrl":"10.1088/1361-6560/ae36e0","url":null,"abstract":"<p><p>The high-throughput extraction of radiomics features from medical images for predictive modelling holds great promise to improve the clinical management of patients. Previous meta-analyses into the radiomics quality score (RQS) applied in the literature have shown that after more than a decade of investigation, issues with workflow standardisation, model reproducibility, validation, and data accessibility persist and impede the clinical translation of radiomics-based models. These systematic findings have informed a timely review of the best practices and pitfalls to avoid within radiomics and predictive modelling, with a focus on realistic radiomics modelling in the context of limited sample sizes. Each section covers a radiomics topic that encompasses one or more RQS criteria and is broken into subsections as follows: (1) a discussion of the background and recommendations on the respective topic, (2) key findings from our meta-analyses and discovered pitfalls, and (3) a succinct list of actionable items that reflect best practice. New and emerging quality appraisal tools and the future direction of radiomics are also discussed.</p>","PeriodicalId":20185,"journal":{"name":"Physics in medicine and biology","volume":" ","pages":""},"PeriodicalIF":3.4,"publicationDate":"2026-02-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145959785","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Overlap guided adaptive fractionation. 重叠引导自适应分馏。
IF 3.4 3区 医学 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2026-02-11 DOI: 10.1088/1361-6560/ae3fff
Yoel Pérez Haas, Lena Kretzschmar, Bertrand Pouymayou, Stephanie Tanadini-Lang, Jan Unkelbach

Objective.Online-adaptive, magnetic-resonance-(MR)-guided radiotherapy on a hybrid MR-linear accelerators enables stereotactic body radiotherapy (SBRT) of abdominal/pelvic tumors with large interfractional motion. However, overlaps between planning target volume (PTV) and dose-limiting organs at risk (OARs) often force compromises in PTV-coverage. Overlap-guided adaptive fractionation (AF) leverages daily variations in PTV/OAR overlap to improve PTV-coverage by administering variable fraction doses based on measured overlap volume. This study aims to assess the potential benefits of overlap-guided AF.Approach.We analyzed 58 patients with abdominal/pelvic tumors having received five-fraction MR-guided SBRT (>6 Gy/fraction), in whom PTV-overlap with at least one dose-limiting OAR (bowel, duodenum, stomach) occurred in⩾1 fraction. Dose-limiting OARs were constrained to 1cc⩽6 Gy per fraction, rendering overlapping PTV volumes underdosed. AF aims to reduce this underdosage by delivering higher doses to the PTV on days with less overlap volume, lower doses on days with more. PTV-coverage-gain compared to uniform fractionation was quantified by the area above the PTV dose-volume-histogram-curve and expressed in ccGy (1ccGy = 1cc receiving 1 Gy more). The optimal dose for each fraction was determined through dynamic programming by formulating AF as a Markov decision process.Main results.PTV/OAR overlap volume variation (standard deviation) varied substantially between patients (0.02-5.76cc). Algorithm-based calculations showed that 55 of 58 patients benefited in PTV-coverage from AF. Mean cohort benefit was 2.93ccGy (range -4.44 (disadvantage) to 22.42ccGy). Higher PTV/OAR overlap variation correlated with larger AF benefit.Significance.Overlap-guided AF for abdominal/pelvic SBRT is a promising strategy to improve PTV-coverage without compromising OAR sparing. Since the benefit of AF depends on PTV/OAR overlap variation-which is low in many patients-the mean cohort advantage is modest. However, well-selected patients with marked PTV/OAR overlap variation derive a relevant dosimetric benefit. Prospective studies are needed to evaluate AF feasibility and quantify clinical benefits.

目的:在线自适应,磁共振(MR)引导放射治疗在混合磁共振线性加速器上实现立体定向放射治疗(SBRT)腹部/盆腔肿瘤大间距运动。然而,计划靶体积(PTV)和危险剂量限制器官(OARs)之间的重叠常常迫使PTV覆盖范围妥协。重叠引导自适应分馏(AF)利用PTV/OAR重叠的每日变化,通过根据测量的重叠体积施用可变分数剂量来提高PTV覆盖。本研究旨在评估重叠引导AF的潜在益处。方法:我们分析了58例接受5分位mr引导SBRT (bbb6gy /分位)的腹部/盆腔肿瘤患者,其中ptv与至少一个剂量限制性OAR(肠、十二指肠、胃)重叠≥1分位。剂量限制桨被限制在每分数1cc≤6Gy,使得重叠的PTV体积剂量不足。AF旨在通过在重叠量较少的日子向PTV提供更高剂量,在重叠量较多的日子提供更低剂量来减少这种剂量不足。与均匀分馏法相比,PTV覆盖增益通过PTV剂量-体积-直方图曲线上方的面积来量化,并以ccGy表示(1ccGy = 1cc多接受1Gy)。每个部分的最佳剂量是通过动态规划确定的,将AF表述为一个马尔可夫决策过程。主要结果:PTV/OAR重叠体积变化(标准差)在患者之间差异很大(0.02 - 5.76cc)。基于算法的计算显示,58例AF患者中有55例受益于ptv覆盖。平均队列获益为2.93ccGy(范围为-4.44(劣势)至22.42ccGy)。更高的PTV/OAR重叠变化与更大的AF益处相关。 ;意义:腹/盆腔SBRT的重叠引导AF是一种很有前途的策略,可以在不影响OAR保留的情况下提高PTV覆盖。由于房颤的益处取决于PTV/OAR重叠变化,这在许多患者中很低,因此平均队列优势是适度的。然而,经过精心挑选的PTV/OAR重叠变异明显的患者可获得相关的剂量学益处。需要前瞻性研究来评估AF的可行性和量化临床益处。
{"title":"Overlap guided adaptive fractionation.","authors":"Yoel Pérez Haas, Lena Kretzschmar, Bertrand Pouymayou, Stephanie Tanadini-Lang, Jan Unkelbach","doi":"10.1088/1361-6560/ae3fff","DOIUrl":"10.1088/1361-6560/ae3fff","url":null,"abstract":"<p><p><i>Objective.</i>Online-adaptive, magnetic-resonance-(MR)-guided radiotherapy on a hybrid MR-linear accelerators enables stereotactic body radiotherapy (SBRT) of abdominal/pelvic tumors with large interfractional motion. However, overlaps between planning target volume (PTV) and dose-limiting organs at risk (OARs) often force compromises in PTV-coverage. Overlap-guided adaptive fractionation (AF) leverages daily variations in PTV/OAR overlap to improve PTV-coverage by administering variable fraction doses based on measured overlap volume. This study aims to assess the potential benefits of overlap-guided AF.<i>Approach.</i>We analyzed 58 patients with abdominal/pelvic tumors having received five-fraction MR-guided SBRT (>6 Gy/fraction), in whom PTV-overlap with at least one dose-limiting OAR (bowel, duodenum, stomach) occurred in⩾1 fraction. Dose-limiting OARs were constrained to 1cc⩽6 Gy per fraction, rendering overlapping PTV volumes underdosed. AF aims to reduce this underdosage by delivering higher doses to the PTV on days with less overlap volume, lower doses on days with more. PTV-coverage-gain compared to uniform fractionation was quantified by the area above the PTV dose-volume-histogram-curve and expressed in ccGy (1ccGy = 1cc receiving 1 Gy more). The optimal dose for each fraction was determined through dynamic programming by formulating AF as a Markov decision process.<i>Main results.</i>PTV/OAR overlap volume variation (standard deviation) varied substantially between patients (0.02-5.76cc). Algorithm-based calculations showed that 55 of 58 patients benefited in PTV-coverage from AF. Mean cohort benefit was 2.93ccGy (range -4.44 (disadvantage) to 22.42ccGy). Higher PTV/OAR overlap variation correlated with larger AF benefit.<i>Significance.</i>Overlap-guided AF for abdominal/pelvic SBRT is a promising strategy to improve PTV-coverage without compromising OAR sparing. Since the benefit of AF depends on PTV/OAR overlap variation-which is low in many patients-the mean cohort advantage is modest. However, well-selected patients with marked PTV/OAR overlap variation derive a relevant dosimetric benefit. Prospective studies are needed to evaluate AF feasibility and quantify clinical benefits.</p>","PeriodicalId":20185,"journal":{"name":"Physics in medicine and biology","volume":" ","pages":""},"PeriodicalIF":3.4,"publicationDate":"2026-02-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146093829","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Physics in medicine and biology
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1