Pub Date : 2022-12-31DOI: 10.1080/15592324.2022.2152224
Xiaomin Wang, Zengyuan Tian, Yu Xi, Yuqi Guo
Seashore mallow (Kosteletzkya virginica), as a noninvasive perennial halophytic oilseed-producing dicot, is native from the Gulf to the Atlantic coasts of the U.S. The purpose of our research was to investigate 1-aminocyclopropane-1carboxylic acid deaminase (ACCD) producing endophytic fungi from K.virginica. A total of 59 endophytic fungal strains, isolated from roots in K.virginica of seedlings, were grouped into 12 genera including in Penicillium, Aspergillus, Fusarium, Trichoderma, Rhizopycnis sp., Ceriporia Donk, Trametes sp., Schizophyllum commune sp., Alternaria, Cladosporium, Cylindrocarpon, and Scytalidium according to sequences of ITS. The ACD activity of 10 endophytic fungi isolated was detected. T.asperellum had the highest ACC deaminase activity among all 10 isolated genera of fungal strains, followed by T. viride. Dry weight and fresh weight of plant, plant height, root length, SOD activity, and chlorophyll content of wheat and soybean inoculated with T.asperellumorT. viride was increased compared with non-inoculated control plants under non salt or salt stress. Further analysis showed that T.asperellum or T.viride strains induced downregulation of the expression of ethylene synthesis-related genes such as ACC oxidase (ACO) and ACC synthase (ACS), thereby reducing ethylene synthesis and damage to plants under salt stress. These endophytic fungi can be used as alternative bioinoculants to increase crop yield in saline soil.
{"title":"Identification of endophytic fungi with ACC deaminase-producing isolated from halophyte <i>Kosteletzkya Virginica</i>.","authors":"Xiaomin Wang, Zengyuan Tian, Yu Xi, Yuqi Guo","doi":"10.1080/15592324.2022.2152224","DOIUrl":"https://doi.org/10.1080/15592324.2022.2152224","url":null,"abstract":"<p><p>Seashore mallow (<i>Kosteletzkya virginica</i>), as a noninvasive perennial halophytic oilseed-producing dicot, is native from the Gulf to the Atlantic coasts of the U.S. The purpose of our research was to investigate 1-aminocyclopropane-1carboxylic acid deaminase (ACCD) producing endophytic fungi from <i>K.virginica</i>. A total of 59 endophytic fungal strains, isolated from roots in <i>K.virginica</i> of seedlings, were grouped into 12 genera including in <i>Penicillium, Aspergillus, Fusarium, Trichoderma, Rhizopycnis</i> sp., <i>Ceriporia Donk, Trametes</i> sp., <i>Schizophyllum commune</i> sp., <i>Alternaria, Cladosporium, Cylindrocarpon</i>, and <i>Scytalidium</i> according to sequences of ITS. The ACD activity of 10 endophytic fungi isolated was detected. <i>T.asperellum</i> had the highest ACC deaminase activity among all 10 isolated <b>genera of</b> fungal strains, followed by <i>T. viride</i>. <b>Dry weight and fresh weight of plant</b>, plant height, root length, SOD activity, and chlorophyll content of wheat and soybean inoculated with <i>T.asperellum</i> <b>or</b> <i>T. viride</i> was increased compared with non-inoculated control plants under non salt or salt stress. Further analysis showed that <i>T.asperellum</i> or <i>T.viride</i> strains induced downregulation of the expression of ethylene synthesis-related genes such as ACC oxidase (ACO) and ACC synthase (ACS), thereby reducing ethylene synthesis and damage to plants under salt stress. These endophytic fungi can be used as alternative bioinoculants to increase crop yield in saline soil.</p>","PeriodicalId":20232,"journal":{"name":"Plant Signaling & Behavior","volume":null,"pages":null},"PeriodicalIF":2.9,"publicationDate":"2022-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9721417/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10481704","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-12-31Epub Date: 2022-01-10DOI: 10.1080/15592324.2021.2021649
Baolu Cui, Min Huang, Chongdai Guo, Ruihong Li, Yuqi Wang
WD40 repeat proteins, the homologs of yeast MSI1, are conserved in plants, participating in protein complexes and playing fundamental functions in plant development. Although several MSI1-like proteins have been cloned and characterized in plants, the roles of MSI1-like proteins in the biennial ornamental plant, Dendrobium nobile Lindl, are still unclear. Here, we report the cloning of the DnMSI1 gene from Dendrobium nobile Lindl with RACE technology. We found that DnMSI1 expression was induced by GA3 and TDZ but inhibited by ABA, PP333, and drought and salt stress. Furthermore, DnMSI1 over-expression in Arabidopsis resulted in decreased tolerance to NaCl stress. These results suggest that DnMSI1 plays negative regulation roles in regulating salinity-stress resistance in Dendrobium nobile Lindl.
{"title":"Cloning and expression analysis of DnMSI1 gene in orchid species <i>Dendrobium nobile</i> Lindl.","authors":"Baolu Cui, Min Huang, Chongdai Guo, Ruihong Li, Yuqi Wang","doi":"10.1080/15592324.2021.2021649","DOIUrl":"https://doi.org/10.1080/15592324.2021.2021649","url":null,"abstract":"<p><p>WD40 repeat proteins, the homologs of yeast MSI1, are conserved in plants, participating in protein complexes and playing fundamental functions in plant development. Although several MSI1-like proteins have been cloned and characterized in plants, the roles of MSI1-like proteins in the biennial ornamental plant, <i>Dendrobium nobile</i> Lindl, are still unclear. Here, we report the cloning of the <i>DnMSI1</i> gene from <i>Dendrobium nobile</i> Lindl with RACE technology. We found that <i>DnMSI1</i> expression was induced by GA<sub>3</sub> and TDZ but inhibited by ABA, PP333, and drought and salt stress. Furthermore, <i>DnMSI1</i> over-expression in <i>Arabidopsis</i> resulted in decreased tolerance to NaCl stress. These results suggest that DnMSI1 plays negative regulation roles in regulating salinity-stress resistance in <i>Dendrobium nobile</i> Lindl.</p>","PeriodicalId":20232,"journal":{"name":"Plant Signaling & Behavior","volume":null,"pages":null},"PeriodicalIF":2.9,"publicationDate":"2022-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9176244/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39680213","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-12-31Epub Date: 2022-02-03DOI: 10.1080/15592324.2022.2025678
Haining Li, Yitong Mu, Xu Chang, GuanRong Li, Zhongquan Dong, Jun Sun, Shengxuan Jin, Xiaolu Wang, Ling Zhang, Shumei Jin
slPHB3 was cloned from Salix linearistipularis, the amino acid sequence blast and phylogenetic tree analysis showed that slPHB3 has the most similarity with PHB3 from Populus trichocarpa using DNAMAN software and MEGA7 software. RT-qPCR results confirmed that the expression of slPHB3 was induced obviously under stress treatments. The growth of recombinant yeast cells was better than that of the control group under the stress treatment, indicating that slPHB3 may be involved in the stress response of yeast cells. The transgenic tobacco was treated with different concentrations of NaCl, NaHCO3 and H2O2, fresh weigh of overexpression tobacco were heavier than wild-types. The results showed that transgenic tobacco was more tolerant to salt and oxidation than wild-type tobacco. Expression of important genes including NHX1 and SOS1 in salt stress response pathways are steadily higher in overexpression tobacco than that in wild-types. We identified 17 proteins interacting with slPHB3 by yeast two-hybrid technique, most of these proteins were relation to the stresses. The salt tolerance of slPHB3 expressing yeast and slPHB3 overexpressing plants were better than that of the control. Ten stress-related proteins may interact with slPHB3, which preliminarily indicated that slPHB3 had a certain response relationship with salt stress. The study of slPHB3 under abiotic stress can improve our understanding of PHB3 gene function.
{"title":"Functional verification and screening of protein interacting with the slPHB3.","authors":"Haining Li, Yitong Mu, Xu Chang, GuanRong Li, Zhongquan Dong, Jun Sun, Shengxuan Jin, Xiaolu Wang, Ling Zhang, Shumei Jin","doi":"10.1080/15592324.2022.2025678","DOIUrl":"10.1080/15592324.2022.2025678","url":null,"abstract":"<p><p><i>slPHB3</i> was cloned from <i>Salix linearistipularis</i>, the amino acid sequence blast and phylogenetic tree analysis showed that slPHB3 has the most similarity with PHB3 from <i>Populus trichocarpa</i> using DNAMAN software and MEGA7 software. RT-qPCR results confirmed that the expression of <i>slPHB3</i> was induced obviously under stress treatments. The growth of recombinant yeast cells was better than that of the control group under the stress treatment, indicating that <i>slPHB3</i> may be involved in the stress response of yeast cells. The transgenic tobacco was treated with different concentrations of NaCl, NaHCO<sub>3</sub> and H<sub>2</sub>O<sub>2</sub>, fresh weigh of overexpression tobacco were heavier than wild-types. The results showed that transgenic tobacco was more tolerant to salt and oxidation than wild-type tobacco. Expression of important genes including <i>NHX1</i> and <i>SOS1</i> in salt stress response pathways are steadily higher in overexpression tobacco than that in wild-types. We identified 17 proteins interacting with slPHB3 by yeast two-hybrid technique, most of these proteins were relation to the stresses. The salt tolerance of <i>slPHB3</i> expressing yeast and <i>slPHB3</i> overexpressing plants were better than that of the control. Ten stress-related proteins may interact with slPHB3, which preliminarily indicated that <i>slPHB3</i> had a certain response relationship with salt stress. The study of <i>slPHB3</i> under abiotic stress can improve our understanding of <i>PHB3</i> gene function.</p>","PeriodicalId":20232,"journal":{"name":"Plant Signaling & Behavior","volume":null,"pages":null},"PeriodicalIF":2.9,"publicationDate":"2022-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9176260/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39585653","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-12-31DOI: 10.1080/15592324.2022.2084955
Matthew D Lemke, Jesse D Woodson
Photosynthesis is an essential process that plants must regulate to survive in dynamic environments. Thus, chloroplasts (the sites of photosynthesis in plant and algae cells) use multiple signaling mechanisms to report their health to the cell. Such signals are poorly understood but often involve reactive oxygen species (ROS) produced from the photosynthetic light reactions. One ROS, singlet oxygen (1O2), can signal to initiate chloroplast degradation, but the cellular machinery involved in identifying and degrading damaged chloroplasts (i.e., chloroplast quality control pathways) is unknown. To provide mechanistic insight into these pathways, two recent studies have investigated degrading chloroplasts in the Arabidopsis thaliana1O2 over-producing plastid ferrochelatase two (fc2) mutant. First, a structural analysis of degrading chloroplasts was performed with electron microscopy, which demonstrated that damaged chloroplasts can protrude into the central vacuole compartment with structures reminiscent of fission-type microautophagy. 1O2-stressed chloroplasts swelled before these interactions, which may be a mechanism for their selective degradation. Second, the roles of autophagosomes and canonical autophagy (macroautophagy) were shown to be dispensable for 1O2-initiated chloroplast degradation. Instead, putative fission-type microautophagy genes were induced by chloroplast 1O2. Here, we discuss how these studies implicate this poorly understood cellular degradation pathway in the dismantling of 1O2-damaged chloroplasts.
{"title":"Targeted for destruction: degradation of singlet oxygen-damaged chloroplasts.","authors":"Matthew D Lemke, Jesse D Woodson","doi":"10.1080/15592324.2022.2084955","DOIUrl":"https://doi.org/10.1080/15592324.2022.2084955","url":null,"abstract":"<p><p>Photosynthesis is an essential process that plants must regulate to survive in dynamic environments. Thus, chloroplasts (the sites of photosynthesis in plant and algae cells) use multiple signaling mechanisms to report their health to the cell. Such signals are poorly understood but often involve reactive oxygen species (ROS) produced from the photosynthetic light reactions. One ROS, singlet oxygen (<sup>1</sup>O<sub>2</sub>), can signal to initiate chloroplast degradation, but the cellular machinery involved in identifying and degrading damaged chloroplasts (<i>i.e</i>., chloroplast quality control pathways) is unknown. To provide mechanistic insight into these pathways, two recent studies have investigated degrading chloroplasts in the <i>Arabidopsis thaliana</i><sup>1</sup>O<sub>2</sub> over-producing <i>plastid ferrochelatase two</i> (<i>fc2</i>) mutant. First, a structural analysis of degrading chloroplasts was performed with electron microscopy, which demonstrated that damaged chloroplasts can protrude into the central vacuole compartment with structures reminiscent of fission-type microautophagy. <sup>1</sup>O<sub>2</sub>-stressed chloroplasts swelled before these interactions, which may be a mechanism for their selective degradation. Second, the roles of autophagosomes and canonical autophagy (macroautophagy) were shown to be dispensable for <sup>1</sup>O<sub>2</sub>-initiated chloroplast degradation. Instead, putative fission-type microautophagy genes were induced by chloroplast <sup>1</sup>O<sub>2</sub>. Here, we discuss how these studies implicate this poorly understood cellular degradation pathway in the dismantling of <sup>1</sup>O<sub>2</sub>-damaged chloroplasts.</p>","PeriodicalId":20232,"journal":{"name":"Plant Signaling & Behavior","volume":null,"pages":null},"PeriodicalIF":2.9,"publicationDate":"2022-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9196835/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10476646","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-12-31DOI: 10.1080/15592324.2022.2129290
Yue Cao, Qing Zhao, Fubin Liu, Lei Zheng, Xingdong Lin, Mingyue Pan, Xuejun Tan, Ge Sun, Kewei Zhao
Extracellular vesicles (EVs) are nano-sized membrane vesicles released by various cell types. Mammalian EVs have been studied in-depth, but the role of plant EVs has rarely been explored. For the first time, EVs from Drynariae Rhizoma roots were isolated and identified using transmission electron microscopy and a flow nano analyzer. Proteomics and bioinformatics were applied to determine the protein composition and complete the functional analysis of the EVs. Seventy-seven proteins were identified from Drynariae Rhizoma root-derived EVs, with enzymes accounting for 47% of the proteins. All of the enzymes were involved in important biological processes in plants. Most of them, including NAD(P)H-quinone oxidoreductase, were enriched in the oxidative phosphorylation pathway in plants and humans, and Alzheimer's disease, Huntington's disease, and Parkinson's disease, which are associated with oxidative stress in humans. These findings suggested that EVs from Drynariae Rhizoma roots could alleviate such neurological diseases and that enzymes, especially NAD(P)H-quinone oxidoreductase, might play an important role in the process.
细胞外囊泡(EVs)是由各种细胞类型释放的纳米级膜囊泡。哺乳动物的电动汽车已经被深入研究,但植物电动汽车的作用很少被探索。首次利用透射电镜和流动纳米分析仪分离鉴定了干麻根中的ev。利用蛋白质组学和生物信息学技术对其进行了蛋白质组成分析和功能分析。共鉴定出77种蛋白质,其中酶类蛋白占47%。所有这些酶都参与了植物的重要生物过程。其中,包括NAD(P) h -醌氧化还原酶在内的大部分在植物和人类的氧化磷酸化途径中富集,以及与人类氧化应激相关的阿尔茨海默病、亨廷顿病和帕金森病。上述结果提示,干风根EVs具有一定的缓解神经系统疾病的作用,其中以NAD(P) h -醌氧化还原酶为代表的酶可能在这一过程中起重要作用。
{"title":"Drug Value of Drynariae Rhizoma Root-Derived Extracellular Vesicles for Neurodegenerative Diseases Based on Proteomics and Bioinformatics.","authors":"Yue Cao, Qing Zhao, Fubin Liu, Lei Zheng, Xingdong Lin, Mingyue Pan, Xuejun Tan, Ge Sun, Kewei Zhao","doi":"10.1080/15592324.2022.2129290","DOIUrl":"https://doi.org/10.1080/15592324.2022.2129290","url":null,"abstract":"<p><p>Extracellular vesicles (EVs) are nano-sized membrane vesicles released by various cell types. Mammalian EVs have been studied in-depth, but the role of plant EVs has rarely been explored. For the first time, EVs from <i>Drynariae Rhizoma</i> roots were isolated and identified using transmission electron microscopy and a flow nano analyzer. Proteomics and bioinformatics were applied to determine the protein composition and complete the functional analysis of the EVs. Seventy-seven proteins were identified from <i>Drynariae Rhizoma</i> root-derived EVs, with enzymes accounting for 47% of the proteins. All of the enzymes were involved in important biological processes in plants. Most of them, including NAD(P)H-quinone oxidoreductase, were enriched in the oxidative phosphorylation pathway in plants and humans, and Alzheimer's disease, Huntington's disease, and Parkinson's disease, which are associated with oxidative stress in humans. These findings suggested that EVs from <i>Drynariae Rhizoma</i> roots could alleviate such neurological diseases and that enzymes, especially NAD(P)H-quinone oxidoreductase, might play an important role in the process.</p>","PeriodicalId":20232,"journal":{"name":"Plant Signaling & Behavior","volume":null,"pages":null},"PeriodicalIF":2.9,"publicationDate":"2022-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9542947/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"33489070","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-12-31DOI: 10.1080/15592324.2022.2096790
Qian-Qian Deng, Mao Ye, Xiao-Bao Wu, Jia Song, Jun Wang, Li-Na Chen, Zhong-Yan Zhu, Jing Xie
Herbivore-induced defense responses are often specific, whereas plants could induce distinct defense responses corresponding to infestation by different herbivorous insects. Brown plant hopper (BPH) Nilaparvata lugens, a phloem-feeding insect, and rice leaf folder (LF) Cnaphalocrocis medinalis, a chewing insect, are both specialist herbivores on rice. To characterize the distinct resistance primed by prior damage to these two specialist herbivores, we challenged rice plants with two herbivores during vegetative growth of parent plants and assessed plant resistance in subsequent ratoons. Here, we show that LF and BPH induce different suites of defense responses in parent rice plants, LF induced higher level of JA accumulation and OsAOS, OsCOI1 transcripts, while BPH induced higher accumulation of SA and OsPAL1 transcripts. Moreover, an apparent loss of LF resistance was observed in OsAOS, OsCOI1 RNAi lines. Ratoon plants generated from parents receiving prior LF infestation exhibited higher jasmonic acid (JA) levels and elevated levels of transcripts of defense-related genes associated with JA signaling, while ratoon generated from parents receiving prior BPH infestation exhibited higher salicylic acid (SA) levels and elevated levels of transcripts of defense-related genes associated with SA signaling. Moreover, previous LF infestation obviously elevated ratoons resistance to LF, while previous infestation by BPH led to enhanced resistance in ratoons to BPH. Pre-priming of ratoons defense to LF was significantly reduced in OsAOS and OsCOI1 RNAi plant, but silencing OsAOS and OsCOI1 did not attenuate ratoons resistance to BPH. These results suggest that infestation of two specialist herbivores with different feeding styles in parent crop led to distinct defense responses in subsequent rations, and the acquired resistance to LF in ratoons is associated with priming of jasmonic acid-dependent defense responses.
{"title":"Damage of brown planthopper (BPH) <i>Nilaparvata lugens</i> and rice leaf folder (LF) <i>Cnaphalocrocis medinalis</i> in parent plants lead to distinct resistance in ratoon rice.","authors":"Qian-Qian Deng, Mao Ye, Xiao-Bao Wu, Jia Song, Jun Wang, Li-Na Chen, Zhong-Yan Zhu, Jing Xie","doi":"10.1080/15592324.2022.2096790","DOIUrl":"10.1080/15592324.2022.2096790","url":null,"abstract":"<p><p>Herbivore-induced defense responses are often specific, whereas plants could induce distinct defense responses corresponding to infestation by different herbivorous insects. Brown plant hopper (BPH) <i>Nilaparvata lugens</i>, a phloem-feeding insect, and rice leaf folder (LF) <i>Cnaphalocrocis medinalis</i>, a chewing insect, are both specialist herbivores on rice. To characterize the distinct resistance primed by prior damage to these two specialist herbivores, we challenged rice plants with two herbivores during vegetative growth of parent plants and assessed plant resistance in subsequent ratoons. Here, we show that LF and BPH induce different suites of defense responses in parent rice plants, LF induced higher level of JA accumulation and <i>OsAOS, OsCOI1</i> transcripts, while BPH induced higher accumulation of SA and <i>OsPAL1</i> transcripts. Moreover, an apparent loss of LF resistance was observed in <i>OsAOS, OsCOI1</i> RNAi lines. Ratoon plants generated from parents receiving prior LF infestation exhibited higher jasmonic acid (JA) levels and elevated levels of transcripts of defense-related genes associated with JA signaling, while ratoon generated from parents receiving prior BPH infestation exhibited higher salicylic acid (SA) levels and elevated levels of transcripts of defense-related genes associated with SA signaling. Moreover, previous LF infestation obviously elevated ratoons resistance to LF, while previous infestation by BPH led to enhanced resistance in ratoons to BPH. Pre-priming of ratoons defense to LF was significantly reduced in <i>OsAOS</i> and <i>OsCOI1</i> RNAi plant, but silencing <i>OsAOS</i> and <i>OsCOI1</i> did not attenuate ratoons resistance to BPH. These results suggest that infestation of two specialist herbivores with different feeding styles in parent crop led to distinct defense responses in subsequent rations, and the acquired resistance to LF in ratoons is associated with priming of jasmonic acid-dependent defense responses.</p>","PeriodicalId":20232,"journal":{"name":"Plant Signaling & Behavior","volume":null,"pages":null},"PeriodicalIF":2.9,"publicationDate":"2022-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9318313/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40536530","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-12-31DOI: 10.1080/15592324.2022.2098645
Rina Carrillo, David A Christopher
The ability to measure the activation of the unfolded protein response (UPR) in plants is important when they are exposed to stressful environments. To this end, we developed a unique and versatile biosensor-reporter system to indicate the activation of UPR in living plant cells. The small cytoplasmically spliced intron from the bZIP60 locus was incorporated into the 5' end of the GFP gene, creating the 35S::bZIP60 intron:GFP construct. When this construct is transiently expressed in Arabidopsis protoplasts, the presence of the bZIP60 intron prevents GFP mRNA from being translated under non-UPR conditions. However, when UPR is activated, the IRE1 kinase/ribonuclease splices this intron from the GFP mRNA and its translation proceeds, generating GFP fluorescence. We demonstrated the utility of the system in Arabidopsis leaf protoplasts treated with DTT, which is a chemical inducer of UPR, followed by visualization and quantification using confocal microscopy. The 35S::bZIP60 intron:GFP construct was also expressed in protoplasts from an overexpressor line containing the coding sequence for the UPR-induced, protein folding chaperone, protein disulfide isomerase-9 (PDI9). PDI9 also influences the strength of the UPR signaling pathway. Protoplasts from WT and PDI9 overexpressor plants treated with DTT exhibited significantly higher GFP fluorescence relative to untreated protoplasts, indicating that the bZIP60 intron was spliced from the GFP mRNA in response to activation of UPR. RT-PCR further confirmed the higher induction of PDI9 and bZIP60 (total and spliced) mRNA levels in DTT-treated protoplasts relative to controls. This system can be adapted for monitoring crop stress and for basic studies dissecting the UPR signaling pathway.
{"title":"Development of a GFP biosensor reporter for the unfolded protein response-signaling pathway in plants: incorporation of the bZIP60 intron into the GFP gene.","authors":"Rina Carrillo, David A Christopher","doi":"10.1080/15592324.2022.2098645","DOIUrl":"https://doi.org/10.1080/15592324.2022.2098645","url":null,"abstract":"<p><p>The ability to measure the activation of the unfolded protein response (UPR) in plants is important when they are exposed to stressful environments. To this end, we developed a unique and versatile biosensor-reporter system to indicate the activation of UPR in living plant cells. The small cytoplasmically spliced intron from the <i>bZIP60</i> locus was incorporated into the 5' end of the GFP gene, creating the 35S::<i>bZIP60</i> intron:GFP construct. When this construct is transiently expressed in <i>Arabidopsis</i> protoplasts, the presence of the <i>bZIP60</i> intron prevents GFP mRNA from being translated under non-UPR conditions. However, when UPR is activated, the IRE1 kinase/ribonuclease splices this intron from the GFP mRNA and its translation proceeds, generating GFP fluorescence. We demonstrated the utility of the system in <i>Arabidopsis</i> leaf protoplasts treated with DTT, which is a chemical inducer of UPR, followed by visualization and quantification using confocal microscopy. The 35S::<i>bZIP60</i> intron:GFP construct was also expressed in protoplasts from an overexpressor line containing the coding sequence for the UPR-induced, protein folding chaperone, protein disulfide isomerase-9 (PDI9). PDI9 also influences the strength of the UPR signaling pathway. Protoplasts from WT and <i>PDI9</i> overexpressor plants treated with DTT exhibited significantly higher GFP fluorescence relative to untreated protoplasts, indicating that the <i>bZIP60</i> intron was spliced from the GFP mRNA in response to activation of UPR. RT-PCR further confirmed the higher induction of <i>PDI9</i> and <i>bZIP60</i> (total and spliced) mRNA levels in DTT-treated protoplasts relative to controls. This system can be adapted for monitoring crop stress and for basic studies dissecting the UPR signaling pathway.</p>","PeriodicalId":20232,"journal":{"name":"Plant Signaling & Behavior","volume":null,"pages":null},"PeriodicalIF":2.9,"publicationDate":"2022-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9302528/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"40606940","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-12-31Epub Date: 2022-01-17DOI: 10.1080/15592324.2021.2013646
Yongwei Liu, Wenye Chen, Linbin Liu, Yuhuan Su, Yuan Li, Weizhe Jia, Bo Jiao, Jiao Wang, Fan Yang, Fushuang Dong, Jianfang Chai, He Zhao, Mengyu Lv, Yanyi Li, Shuo Zhou
Calmodulin (CaM) and calmodulin-like (CML) genes are widely involved in plant growth and development and mediating plant stress tolerance. However, the whole genome scale studies about CaM and CML gene families have not been done in wheat, and the possible functions of most wheat CaM/CML gene members are still unknown. In this study, a total of 18 TaCaM and 230 TaCML gene members were identified in wheat genome. Among these genes, 28 TaCaM/CML gene members have 74 duplicated copies, while 21 genes have 48 transcript variants, resulting in 321 putative TaCaM/CML transcripts totally. Phylogenetic tree analysis showed that they can be classified into 7 subfamilies. Similar gene structures and protein domains can be found in members of the same gene cluster. The TaCaM/CML genes were spread among all 21 chromosomes with unbalanced distributions, while most of the gene clusters contained 3 homoeologous genes located in the same homoeologous chromosome group. Synteny analysis showed that most of TaCaM/CMLs gene members can be found with 1-4 paralogous genes in T. turgidum and Ae. Tauschii. High numbers of cis-acting elements related to plant hormones and stress responses can be observed in the promoters of TaCaM/CMLs. The spatiotemporal expression patterns showed that most of the TaCaM/TaCML genes can be detected in at least one tissue. The expression levels of TaCML17, 21, 30, 50, 59 and 75 in the root or shoot can be up-regulated by abiotic stresses, suggesting that TaCML17, 21, 30, 50, 59 and 75 may be related with responses to abiotic stresses in wheat. The spatiotemporal expression patterns of TaCaM/CML genes indicated they may be involved widely in wheat growth and development. Our results provide important clues for exploring functions of TaCaMs/CMLs in growth and development as well as responses to abiotic stresses in wheat in the future.
{"title":"Genome-wide identification and expression analysis of calmodulin and calmodulin-like genes in wheat (<i>Triticum aestivum</i> L.).","authors":"Yongwei Liu, Wenye Chen, Linbin Liu, Yuhuan Su, Yuan Li, Weizhe Jia, Bo Jiao, Jiao Wang, Fan Yang, Fushuang Dong, Jianfang Chai, He Zhao, Mengyu Lv, Yanyi Li, Shuo Zhou","doi":"10.1080/15592324.2021.2013646","DOIUrl":"10.1080/15592324.2021.2013646","url":null,"abstract":"<p><p>Calmodulin (<i>CaM</i>) and calmodulin-like (<i>CML</i>) genes are widely involved in plant growth and development and mediating plant stress tolerance. However, the whole genome scale studies about <i>CaM</i> and <i>CML</i> gene families have not been done in wheat, and the possible functions of most wheat <i>CaM/CML</i> gene members are still unknown. In this study, a total of 18 <i>TaCaM</i> and 230 <i>TaCML</i> gene members were identified in wheat genome. Among these genes, 28 <i>TaCaM/CML</i> gene members have 74 duplicated copies, while 21 genes have 48 transcript variants, resulting in 321 putative <i>TaCaM/CML</i> transcripts totally. Phylogenetic tree analysis showed that they can be classified into 7 subfamilies. Similar gene structures and protein domains can be found in members of the same gene cluster. The <i>TaCaM/CML</i> genes were spread among all 21 chromosomes with unbalanced distributions, while most of the gene clusters contained 3 homoeologous genes located in the same homoeologous chromosome group. Synteny analysis showed that most of <i>TaCaM/CMLs</i> gene members can be found with 1-4 paralogous genes in <i>T. turgidum</i> and <i>Ae. Tauschii</i>. High numbers of <i>cis</i>-acting elements related to plant hormones and stress responses can be observed in the promoters of <i>TaCaM/CMLs</i>. The spatiotemporal expression patterns showed that most of the <i>TaCaM/TaCML</i> genes can be detected in at least one tissue. The expression levels of <i>TaCML17, 21, 30, 50, 59</i> and <i>75</i> in the root or shoot can be up-regulated by abiotic stresses, suggesting that <i>TaCML17, 21, 30, 50, 59</i> and <i>75</i> may be related with responses to abiotic stresses in wheat. The spatiotemporal expression patterns of <i>TaCaM/CML</i> genes indicated they may be involved widely in wheat growth and development. Our results provide important clues for exploring functions of <i>TaCaMs/CMLs</i> in growth and development as well as responses to abiotic stresses in wheat in the future.</p>","PeriodicalId":20232,"journal":{"name":"Plant Signaling & Behavior","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2022-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8959510/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39824646","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-12-31DOI: 10.1080/15592324.2022.2129291
Matthew Adam Thomas, Robin Lewis Cooper
Whether through root secretions or by emitting volatile organic compounds, plant communication has been well-documented. While electrical activity has been documented in plants and mycorrhizal bodies on the individual and ramet, electrical propagation as a means of communication between plants has been hypothesized but understudied. This study aimed to test the hypothesis that plants can communicate with one another electrically via conductively isolated mycelial pathways. We created a bio-electric circuit linking two plants using a mycelial network grown from a blend of mycorrhizal fungi which was directly inoculated onto potato dextrose agar, or onto the host plants placed on the agar. The mycelium that grew was forced to cross, or "bridge," an air gap between the two islands of agar - thus forming the isolated conductive pathway between plants. Using this plant-fungal biocircuit we assessed electrical propagation between Pisum sativum and Cucumis sativus. We found that electrical signals were reliably conducted across the mycelial bridges from one plant to another upon the induction of a wound response. Our findings provide evidence that mechanical input can be communicated between plant species and opens the door to testing how this information can affect plant and fungal physiology.
{"title":"Building bridges: mycelium-mediated plant-plant electrophysiological communication.","authors":"Matthew Adam Thomas, Robin Lewis Cooper","doi":"10.1080/15592324.2022.2129291","DOIUrl":"https://doi.org/10.1080/15592324.2022.2129291","url":null,"abstract":"<p><p>Whether through root secretions or by emitting volatile organic compounds, plant communication has been well-documented. While electrical activity has been documented in plants and mycorrhizal bodies on the individual and ramet, electrical propagation as a means of communication <i>between</i> plants has been hypothesized but understudied. This study aimed to test the hypothesis that plants can communicate with one another <i>electrically</i> via conductively isolated mycelial pathways. We created a bio-electric circuit linking two plants using a mycelial network grown from a blend of mycorrhizal fungi which was directly inoculated onto potato dextrose agar, or onto the host plants placed on the agar. The mycelium that grew was forced to cross, or \"bridge,\" an air gap between the two islands of agar - thus forming the isolated conductive pathway between plants. Using this plant-fungal biocircuit we assessed electrical propagation between <i>Pisum sativum</i> and <i>Cucumis sativus</i>. We found that electrical signals were reliably conducted across the mycelial bridges from one plant to another upon the induction of a wound response. Our findings provide evidence that mechanical input can be communicated between plant species and opens the door to testing how this information can affect plant and fungal physiology.</p>","PeriodicalId":20232,"journal":{"name":"Plant Signaling & Behavior","volume":null,"pages":null},"PeriodicalIF":2.9,"publicationDate":"2022-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9673936/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10426697","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-12-31DOI: 10.1080/15592324.2022.2142725
Muhammad Ilyas, Safdar Hussain Shah, Yasunari Fujita, Kyonoshin Maruyama, Kazuo Nakashima, Kazuko Yamaguchi-Shinozaki, Asad Jan
Different abiotic stresses induce OsTZF1, a tandem CCCH-type zinc finger domain gene, in rice. Here, we report that transgenic rice plants overexpressing OsTZF1 under own promoter (POsTZF1:OsTZF1-OX [for overexpression]) transferred to soil showed normal growth similar to vector control plants. The POsTZF1:OsTZF1-OX produced normal leaves without any lesion mimic phenotype and exhibited normal seed setting. The POsTZF1:OsTZF1-OX plants showed significantly increased tolerance to salt and drought stresses and enhanced post stress recovery. Microarray analysis revealed a total of 846 genes up-regulated and 360 genes down-regulated in POsTZF1:OsTZF1-OX salt-treated plants. Microarray analysis of POsTZF1:OsTZF1-OX plants showed the regulation of many abiotic stress tolerance genes. These results suggest that OsTZF1-OX under own promoter show abiotic stress tolerance and produces no pleiotropic effect on phenotype of transgenic rice plant.
{"title":"OsTZF1, a CCCH-tandem zinc finger protein gene, driven under own promoter produces no pleiotropic effects and confers salt and drought tolerance in rice.","authors":"Muhammad Ilyas, Safdar Hussain Shah, Yasunari Fujita, Kyonoshin Maruyama, Kazuo Nakashima, Kazuko Yamaguchi-Shinozaki, Asad Jan","doi":"10.1080/15592324.2022.2142725","DOIUrl":"https://doi.org/10.1080/15592324.2022.2142725","url":null,"abstract":"<p><p>Different abiotic stresses induce <i>OsTZF1</i>, a tandem CCCH-type zinc finger domain gene, in rice. Here, we report that transgenic rice plants overexpressing <i>OsTZF1</i> under own promoter (<i>P<sub>OsTZF1</sub>:OsTZF1-</i>OX [for overexpression]) transferred to soil showed normal growth similar to vector control plants. The <i>P<sub>OsTZF1</sub>:OsTZF1-</i>OX produced normal leaves without any lesion mimic phenotype and exhibited normal seed setting. The <i>P<sub>OsTZF1</sub>:OsTZF1-</i>OX plants showed significantly increased tolerance to salt and drought stresses and enhanced post stress recovery. Microarray analysis revealed a total of 846 genes up-regulated and 360 genes down-regulated in <i>P<sub>OsTZF1</sub>:OsTZF1-</i>OX salt-treated plants. Microarray analysis of <i>P<sub>OsTZF1:</sub>OsTZF1-</i>OX plants showed the regulation of many abiotic stress tolerance genes. These results suggest that <i>OsTZF1</i>-OX under own promoter show abiotic stress tolerance and produces no pleiotropic effect on phenotype of transgenic rice plant.</p>","PeriodicalId":20232,"journal":{"name":"Plant Signaling & Behavior","volume":null,"pages":null},"PeriodicalIF":2.9,"publicationDate":"2022-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9677997/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10426699","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}