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Novel roles for Arabidopsis dynamin-related proteins DRP1A and DRP2B in resistance against Botrytis cinerea fungal infection. 拟南芥动力蛋白相关蛋白DRP1A和DRP2B在抗灰葡萄孢真菌感染中的新作用
IF 2.9 4区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2022-12-31 DOI: 10.1080/15592324.2022.2129296
Grant Mc Gowan, Gayani Ekanayake, Robert A Ingle, Antje Heese

Arabidopsis DYNAMIN-RELATED PROTEIN1A (AtDRP1A) and AtDRP2B are large GTPases that function together in endocytosis for effective cytokinesis, cell enlargement and development. A recent study shows that these DRPs contribute to ligand-induced endocytosis of the immune receptor FLAGELLIN SENSING2 (AtFLS2) to modulate flg22-immune signaling, and they are required for immunity against Pseudomonas syringae pv. tomato bacteria. Here, we demonstrate that atdrp1a and atdrp2b single mutants showed increased susceptibility to Botrytis cinerea indicating that AtDRP1A and AtDRP2B are necessary for effective resistance against this necrotrophic fungus. Thus, we expanded our limited understanding of clathrin endocytic accessory proteins in immunity against plant pathogens.

拟南芥动力蛋白相关蛋白1a (AtDRP1A)和AtDRP2B是大的gtpase,它们在胞吞作用中共同起作用,有效地进行细胞分裂、细胞扩大和发育。最近的一项研究表明,这些DRPs参与配体诱导的免疫受体FLAGELLIN SENSING2 (AtFLS2)的内吞,以调节flg22免疫信号,并且它们是对丁香假单胞菌pv的免疫所必需的。番茄细菌。在这里,我们证明了atdrp1a和atdrp2b单突变体对灰霉病的易感性增加,这表明atdrp1a和atdrp2b是有效抵抗这种坏死性真菌所必需的。因此,我们扩大了对网格蛋白内吞辅助蛋白在植物病原体免疫中的有限认识。
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引用次数: 0
Chemically defined elicitors activate priming in tomato seedlings. 化学定义的激发子激活番茄幼苗的启动。
IF 2.9 4区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2022-12-31 DOI: 10.1080/15592324.2022.2095143
Kiran R Kharat, Raveendran Pottathil

Tomato (Solanum lycopersicum L.) is an important crop that possesses about 35,000 genes. The treatment of plants with elicitors or pathogen attacks causes a cascade of defense reactions. We investigated tomato responses to the BamFXTM solution containing Zn and Cu elicitors and report the results of comparative transcriptome analysis of tomato seeds treated with Zn and Cu elicitors. The seeds were treated with optimum concentrations of Bam-FX solutions and subjected to cold methanolic extraction methods to obtain the secondary metabolites produced within them at different time intervals post-Bam-FX treatment. The metabolite mixture was analyzed using gas chromatography-mass spectrometry (GCMS). In transcriptome sequencing, GO and KEGG analyses revealed that the majority of the DEGs in BamFx-treated tomato was associated with primary and secondary metabolism, plant hormone signal transduction, TF regulation, transport, and responses to stimuli.The secondary metabolites found in the BamFX treated tomato seedlings - Esters of Fumaric acid, Succinic acid etc. The transcript levels of most auxin transporter-encoding genes changed significantly in the BamFX-treated seedlings (e.g., Solyc01g007010.3, a RING-type E3 ubiquitin transferase). The gene Solyc07g061720.3 for Gibberellin 2-oxidase and the Phorbol-ester/DAG-type domain-containing protein (Solyc02g068680.1) associated with the intracellular signaling genes were found upregulated in the BamFx-treated seeds. The time-dependent effect of the BamFX (1:500 for 60 min) was found to be regulating Abscisic acid signaling pathway genes (Solyc09g015380.1). This study identified many candidate genes for future functional analyses and laid a theoretical foundation for an improved understanding of the molecular mechanisms involved in the BamFx treatment of tomatoes to improve stress resistance.

番茄(Solanum lycopersicum L.)是一种重要的作物,拥有约35000个基因。用激发子或病原体攻击处理植物会引起一连串的防御反应。我们研究了番茄对含有Zn和Cu激发子的BamFXTM溶液的反应,并报道了Zn和Cu激发子处理番茄种子的比较转录组分析结果。用最佳浓度的Bam-FX溶液处理种子,并进行冷甲醇提取,以获得Bam-FX处理后不同时间间隔产生的次生代谢物。采用气相色谱-质谱法(GCMS)对代谢物混合物进行分析。在转录组测序中,GO和KEGG分析显示,bamfx处理的番茄中的大多数deg与初级和次级代谢、植物激素信号转导、TF调节、运输和对刺激的反应有关。经BamFX处理的番茄幼苗次生代谢产物富马酸酯、琥珀酸酯等。在bamfx处理的幼苗中,大多数生长素转运蛋白编码基因的转录水平发生了显著变化(例如,Solyc01g007010.3,一种ring型E3泛素转移酶)。与赤霉素2-氧化酶相关的基因Solyc07g061720.3和与细胞内信号基因相关的phorboll -酯/ dag型结构域蛋白(Solyc02g068680.1)在bamfx处理的种子中表达上调。BamFX的时间依赖性效应(1:500 60 min)被发现调节脱落酸信号通路基因(Solyc09g015380.1)。本研究确定了许多候选基因用于未来的功能分析,为进一步了解BamFx处理番茄提高抗逆性的分子机制奠定了理论基础。
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引用次数: 0
Phenotypic effect of growth media on Arabidopsis thaliana root hair growth. 生长培养基对拟南芥根毛生长的表型影响。
IF 2.9 4区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2022-12-31 DOI: 10.1080/15592324.2022.2104002
Naomi Claeijs, Kris Vissenberg

Over the years, many different growth media have been used to grow Arabidopsis thaliana in vitro in petri dishes. For these media the nutrient composition may vary, sugars may or may not be added, the medium may or may not be buffered and there is a choice between different gelling agents. The magnitude of possible combinations of these variables obstructs easy comparison of seedling phenotypes grown on the different media. This is especially obvious when it concerns the study of root hairs that are extremely sensitive to changes in their environment. To demonstrate this effect, we have grown Arabidopsis thaliana wild-type seeds on 18 different combinations of growth media and quantified root hair development. Comparison of root hair length and the respective root hair profiles identified the media that result in the formation of the longest root hairs. On these favored media they elongate through tip growth at a constant growth rate until they reach their final length (around 0.6 mm) at a distance of ±4 mm from the root tip.

多年来,许多不同的生长介质已被用于在培养皿中体外培养拟南芥。对于这些培养基,营养成分可以变化,可以添加糖也可以不添加糖,培养基可以缓冲也可以不缓冲,并且可以在不同的胶凝剂之间进行选择。这些变量可能组合的大小阻碍了在不同培养基上生长的幼苗表型的比较。当研究对环境变化极其敏感的根毛时,这一点尤为明显。为了证明这一效应,我们将拟南芥野生型种子生长在18种不同的生长介质组合上,并对根毛发育进行了量化。根毛长度和各自的根毛轮廓的比较确定了导致最长根毛形成的介质。在这些有利的培养基上,它们通过尖端生长以恒定的生长速率延长,直到它们在距离根尖±4mm处达到最终长度(约0.6 mm)。
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引用次数: 1
Genome-wide identification and characterization of the HD-Zip gene family and expression analysis in response to stress in Rehmannia glutinosa Libosch. 地黄HD-Zip基因家族的全基因组鉴定与表达分析
IF 2.9 4区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2022-12-31 DOI: 10.1080/15592324.2022.2096787
Yunhao Zhu, Shuping Peng, Le Zhao, Weisheng Feng, Chengming Dong

The HD-Zip family of transcription factors is unique to the plant kingdom, and play roles in modulation of plant growth and response to environmental stresses. R. glutinosa is an important Chinese medicinal material. Its yield and quality are susceptible to various stresses. The HD-Zip transcription factors is unique to the plant, and roles in modulation of plant growth and response to environmental stresses. However, there is no relevant research on the HD-ZIP of R. glutinosa. In this study, 92 HD-Zip transcription factors were identified in R. glutinosa, and denominated as RgHDZ1-RgHDZ92. Members of RgHDZ were classified into four groups (HD-ZipI-IV) based on the phylogenetic relationship of Arabidopsis HD-Zip proteins, and each group contains 38, 18, 17, and 19 members, respectively. Expression analyses of RgHDZ genes based on transcriptome data showed that the expression of these genes could be induced by the endophytic fungus of R. glutinosa. Additionally, we showed that RgHDZ genes were differentially expressed in response to drought, waterlogging, temperature, and salinity treatments. This study provides important information for different expression patterns of stress-responsive HD-Zip and may contribute to the better understanding of the different responses of plants to biotic and abiotic stresses, and provide a molecular basis for the cultivation of resistant varieties of R. glutinosa.

HD-Zip转录因子家族是植物界特有的转录因子,在植物生长和对环境胁迫的响应中起调节作用。地黄是一种重要的中药材。其产量和质量易受各种应力的影响。HD-Zip转录因子是植物特有的转录因子,在调节植物生长和对环境胁迫的响应中起着重要作用。但目前尚无相关研究对地黄的HD-ZIP进行分析。本研究共鉴定出92个HD-Zip转录因子,编号为RgHDZ1-RgHDZ92。根据拟南芥HD-Zip蛋白的系统发育关系,将RgHDZ成员分为4组(HD-ZipI-IV),每组分别包含38、18、17和19个成员。基于转录组数据的RgHDZ基因表达分析表明,这些基因可以通过内生真菌诱导表达。此外,我们还发现RgHDZ基因在干旱、涝渍、温度和盐度处理下存在差异表达。本研究为了解HD-Zip基因的不同表达模式提供了重要信息,有助于更好地了解植物对生物和非生物胁迫的不同反应,并为培养耐药品种提供分子基础。
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引用次数: 0
HRM and CRAC in MxIRT1 act as iron sensors to determine MxIRT1 vesicle-PM fusion and metal transport. MxIRT1中的HRM和CRAC作为铁传感器来确定MxIRT1囊泡- pm融合和金属运输。
IF 2.9 4区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2022-12-31 Epub Date: 2021-11-23 DOI: 10.1080/15592324.2021.2005881
Song Tan, Xi Zhang, Qi Zhang, Yu-Meng Li, Peng Zhang, Li-Ping Yin

The IRON-REGULATED TRANSPORTER1 (IRT1) is critical for iron uptake in roots, and its exocytosis to the plasma membrane (PM) is regulated by detergent-resistant membranes. However, studies on IRT1 exocytosis and function in response to iron status are limited. Presently, we found that the histidine-rich motif (HRM) of MxIRT1 could bind to iron directly and HRM determined the delivery of MxIRT1 to the PM, after which the cholesterol recognition amino acid consensus (CRAC) motif-regulated MxIRT1 mediated metal transport. IMAC assay revealed that H192 was the vital site for HRM binding to Fe2+, and metal-binding activity was stopped after the deletion of HRM (MxIRT1∆HM) or in H192 site-directed mutants (H192A). MxIRT1∆HM or H192A in transgenic yeast and Arabidopsis failed to localize in the PM and displayed impaired iron absorption. In the PM, Y266 in CRAC was required for metal transport; Y266A transgenic Arabidopsis displayed the same root length, Cd2+ flux, and Fe concentration as Arabidopsis mutant irt1 under iron-deficient conditions. Therefore, H192 in HRM may be an iron sensor to regulate delivery of MxIRT1 vesicles to the PM after binding with iron; Y266 in CRAC acts as an iron sensor for active metal transport under iron-deficient conditions.

铁调节转运蛋白1 (IRT1)对根的铁吸收至关重要,其向质膜(PM)的胞吐作用受耐洗涤剂膜的调节。然而,有关IRT1胞吐及其功能对铁状态的响应的研究有限。目前,我们发现MxIRT1的富组氨酸基元(HRM)可以直接与铁结合,HRM决定了MxIRT1向PM的传递,之后胆固醇识别氨基酸共识(CRAC)基元调节MxIRT1介导的金属运输。IMAC实验显示H192是HRM与Fe2+结合的重要位点,在HRM (MxIRT1∆HM)缺失或H192位点导向突变体(H192A)中,金属结合活性停止。转基因酵母和拟南芥中的MxIRT1∆HM或H192A无法在PM中定位,并表现出铁吸收受损。在PM中,crc中需要Y266用于金属运输;在缺铁条件下,Y266A转基因拟南芥表现出与突变体irt1相同的根长、Cd2+通量和铁浓度。因此,HRM中的H192可能是一个铁传感器,在与铁结合后调节MxIRT1囊泡向PM的传递;CRAC中的Y266作为铁传感器,用于缺铁条件下的活性金属运输。
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引用次数: 3
Altered carbon status in Glycine max hairy roots induced by Agrobacterium rhizogenes. 根瘤农杆菌诱导的甘氨酸最大发根中碳状态的改变。
IF 2.9 4区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2022-12-31 DOI: 10.1080/15592324.2022.2097469
Satoru Okamoto, Yukiko Ueki

Plants fix CO2 into carbohydrates through photosynthesis, and various organisms interact with plants to obtain carbohydrates. Agrobacterium rhizogenes is a soil bacterium known as a plant pathogen that induces hairy root disease. Through A. rhizogenes-plant interactions, transfer-DNA (T-DNA) of the Ri plasmid is inserted into the host plant genome, leading to excessive formation of hairy roots and the synthesis of opines that are carbon and nitrogen sources for A. rhizogenes. In this study, we analyzed the carbohydrate contents in soybean (Glycine max) hairy roots. We found that the starch content was strongly increased in hairy roots, whereas the glucose was significantly decreased. On the other hand, no significant differences were observed in sucrose levels between the main roots and hairy roots of A. rhizogenes-inoculated plants. This result suggests that A. rhizogenes infection caused a change in primary carbon metabolism in the host plant cells.

植物通过光合作用将二氧化碳固定为碳水化合物,各种生物与植物相互作用以获取碳水化合物。根瘤农杆菌(Agrobacterium rhizogenes)是一种被称为植物病原体的土壤细菌,可诱发毛细根病。通过根瘤农杆菌与植物的相互作用,Ri 质粒的转移 DNA(T-DNA)被插入寄主植物基因组,导致毛细根的过度形成,并合成作为根瘤农杆菌碳源和氮源的鸦片。本研究分析了大豆(Glycine max)毛细根中的碳水化合物含量。我们发现,毛根中的淀粉含量显著增加,而葡萄糖含量则明显减少。另一方面,在根瘤菌接种植株的主根和毛根中,蔗糖含量没有明显差异。这一结果表明,根瘤菌感染导致寄主植物细胞的初级碳代谢发生了变化。
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引用次数: 0
Cesium could be used as a proxy for potassium in mycorrhizal Medicago truncatula. 铯可以作为菌根紫花苜蓿中钾的代用物。
IF 2.9 4区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2022-12-31 DOI: 10.1080/15592324.2022.2134676
Arjun Kafle, Kevin Garcia

Arbuscular mycorrhizal (AM) fungi interact with the roots of most land plants and help them to acquire various mineral resources from the soil, including potassium (K+). However, tracking K+ movement in AM symbiosis remains challenging. Recently, we reported that rubidium can be used as a proxy for K+ in mycorrhizal Medicago truncatula. In the present work, we investigated the possibility of using cesium (Cs+) as another proxy for K+ in AM symbiosis. Plants were placed in growing systems that include a separate compartment only accessible to the AM fungus Rhizophagus irregularis isolate 09 and in which various amounts of cesium chloride (0 mM, 0.5 mM, 1.5 mM, or 3.75 mM) were supplied. Plants were watered with sufficient K+ or K+-free nutrient solutions, and shoot and root biomass, fungal colonization, and K+ and Cs+ concentrations were recorded seven weeks after inoculation. Our results indicate that Cs+ accumulated in plant tissues only when K+ was present in the nutrient solution and when the highest concentration of Cs+ was used in the fungal compartment. Consequently, we conclude that Cs+ could be used as a proxy for K+ in AM symbiosis, but with serious limitations.

丛枝菌根(AM)真菌与大多数陆地植物的根相互作用,并帮助它们从土壤中获取各种矿物资源,包括钾(K+)。然而,在AM共生关系中追踪K+的运动仍然具有挑战性。最近,我们报道了铷可以作为菌根紫花苜蓿中K+的代用物。在目前的工作中,我们研究了在AM共生中使用铯(Cs+)作为K+的另一个代理的可能性。植物被放置在生长系统中,该系统包括一个单独的隔间,只有AM真菌Rhizophagus irregularis分离株09才能进入,并提供不同量的氯化铯(0 mM, 0.5 mM, 1.5 mM或3.75 mM)。接种7周后,用充足的K+或不含K+的营养液浇灌植株,记录茎部和根系生物量、真菌定植量以及K+和Cs+浓度。结果表明,只有营养液中含有K+和真菌室中Cs+浓度最高时,Cs+才会在植物组织中积累。因此,我们得出结论,Cs+可以作为AM共生中K+的代理,但存在严重的局限性。
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引用次数: 0
Aluminum stress signaling, response, and adaptive mechanisms in plants. 铝胁迫在植物中的信号、反应和适应机制。
IF 2.9 4区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2022-12-31 DOI: 10.1080/15592324.2022.2057060
Huabin Liu, Rong Zhu, Kai Shu, Weixiang Lv, Song Wang, Chengliang Wang

Over 40% of arable land in the world is acidic. Al stress has become a global agricultural problem affecting plant growth and limiting crop production in acidic soils. Plants have evolved different regulatory mechanisms of adaptation to exogenous environmental challenges, such as Al stress, by altering their growth patterns. In the past decades, several key genes involved in plant response to Al stress and the mechanism of Al detoxification have been revealed. However, the signaling pathways of plant response to Al stress and the regulatory mechanism of plant Al tolerance remain poorly understood. In this review, we summarized the findings of recent studies on the plant Al tolerance mechanism and the molecular regulation mechanism of phytohormones in response to Al stress. This review improves our understanding of the regulatory mechanisms of plants in response to Al stress and provides a reference for the breeding of Al-tolerant crops.

世界上超过40%的可耕地是酸性的。铝胁迫已成为影响酸性土壤植物生长和限制作物生产的全球性农业问题。植物通过改变生长模式,进化出了适应外源环境挑战(如铝胁迫)的不同调节机制。在过去的几十年里,植物对铝胁迫反应的几个关键基因和铝解毒机制已经被揭示出来。然而,植物对铝胁迫的信号通路和铝耐受性的调控机制尚不清楚。本文综述了近年来植物对铝的耐受机制和植物激素对铝胁迫的分子调控机制的研究进展。本文综述有助于进一步了解植物对铝胁迫的调控机制,为耐铝作物的选育提供参考。
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引用次数: 14
Mechanism of calcium signal response to cadmium stress in duckweed. 浮萍钙信号对镉胁迫的响应机制。
IF 2.9 4区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2022-12-31 DOI: 10.1080/15592324.2022.2119340
Qiuting Ren, Ziyi Xu, Ying Xue, Rui Yang, Xu Ma, Jinge Sun, Jing Wang, Shuang Lin, Wenqiao Wang, Lin Yang, Zhanpeng Sun

Cadmium (Cd) causes serious damage to plants. Although calcium (Ca) signal has been found to respond to certain stress, the localization of Ca and molecular mechanisms underlying Ca signal in plants during Cd stress are largely unknown. In this study, Ca2+-sensing fluorescent reporter (GCaMP3) transgenic duckweed showed the Ca2+ signal response in Lemna turionifera 5511 (duckweed) during Cd stress. Subsequently, the subcellular localization of Ca2+ has been studied during Cd stress by transmission electron microscopy, showing the accumulation of Ca2+ in vacuoles. Also, Ca2+ flow during Cd stress has been measured. At the same time, the effects of exogenous glutamic acid (Glu) and γ-aminobutyric (GABA) on duckweed can better clarify the signal operation mechanism of plants to Cd stress. The molecular mechanism of Ca2+ signal responsed during Cd stress showed that Cd treatment promotes the positive response of Ca signaling channels in plant cells, and thus affects the intracellular Ca content. These novel signal studies provided an important Ca2+ signal molecular mechanism during Cd stress.

镉(Cd)对植物造成严重危害。虽然已经发现钙(Ca)信号对某些胁迫有响应,但Cd胁迫下植物体内钙的定位和钙信号的分子机制仍不清楚。在本研究中,转Ca2+感应荧光报告基因(GCaMP3)的浮萍在Cd胁迫下显示了lena turionifera 5511对Ca2+信号的响应。随后,通过透射电镜研究了镉胁迫下Ca2+的亚细胞定位,显示了Ca2+在液泡中的积累。还测量了镉胁迫下Ca2+的流动。同时,外源谷氨酸(Glu)和γ-氨基丁酸(GABA)对浮萍的影响可以更好地阐明植物对Cd胁迫的信号操作机制。Cd胁迫下Ca2+信号响应的分子机制表明,Cd处理促进了植物细胞内Ca信号通道的积极响应,从而影响细胞内Ca含量。这些新的信号研究提供了镉胁迫下Ca2+信号的重要分子机制。
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引用次数: 3
AKR2A is involved in the flowering process of Arabidopsis thaliana. AKR2A参与拟南芥的开花过程。
IF 2.9 4区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2022-12-31 DOI: 10.1080/15592324.2022.2100685
Qian Tang, Ya-Nan Zhao, Shan Luo, Shan Lu

Flowering at an appropriate time is crucial for plant development and reproduction. In Arabidopsis, the flowering process is managed by a regulatory network composed of at least 6 independent pathways. As a core protein in flowering regulation, FLOWERING LOCUS T (FT) participates in almost all these pathways. ANKYRIN REPEAT-CONTAINING PROTEIN 2A (AKR2A) was initially discovered as a 14-3-3-interacting protein. It was then found to be involved in the transportation of chloroplast outer membrane proteins and the resistance to low-temperature stress. Here, we identified an akr2a null mutant with a delayed flowering phenotype. Through the quantitative real-time PCR (qRT-PCR) and bimolecular fluorescence complementation (BiFC) assays, we demonstrated that AKR2A modulates the flowering process through its interaction with FT.

适时开花对植物的发育和繁殖至关重要。在拟南芥中,开花过程由至少6个独立通路组成的调控网络管理。开花位点T作为开花调控的核心蛋白,几乎参与了上述所有通路。ANKYRIN REPEAT-CONTAINING PROTEIN 2A (AKR2A)最初是作为14-3-3相互作用蛋白被发现的。随后发现它参与叶绿体外膜蛋白的运输和对低温胁迫的抗性。在这里,我们鉴定了一个akr2a零突变体,具有延迟开花表型。通过实时荧光定量PCR (qRT-PCR)和双分子荧光互补(BiFC)分析,我们证实AKR2A通过与FT的相互作用调节开花过程。
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引用次数: 1
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Plant Signaling & Behavior
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