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Novelties in nomenclature and typification appearing in Phycological Research 71 (3) 生理学研究中出现的命名法和类型学的新奇之处71 (3)
IF 1.5 4区 生物学 Q2 MARINE & FRESHWATER BIOLOGY Pub Date : 2023-07-01 DOI: 10.1111/pre.12527
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引用次数: 0
Issue Information 问题信息
IF 1.5 4区 生物学 Q2 MARINE & FRESHWATER BIOLOGY Pub Date : 2023-07-01 DOI: 10.1111/pre.12494
Left panel: Lateral view of a lenticular cell of Valonia utricularis at the beginning (upper) and the end (lower) of a 22‐hr observation. Arrowheads with numbers indicate carbon particles along the cell outline. Right panel: (upper) Changes in cell outline and position of the numbered carbon particles in the lenticular cell at 2‐hr intervals. (lower) The segmental extension profile of the lenticular cell showing the anisotropic cell surface growth. Numbers represent those used for labelling the carbon particles. See Mine et al. in this issue for details.
左图:22小时观察开始时(上)和结束时(下)的椭圆肌谷透镜状细胞的侧视图。带数字的箭头表示沿着细胞轮廓的碳颗粒。右图:(上)透镜状细胞中编号碳颗粒的细胞轮廓和位置每隔2小时发生变化。(下)显示各向异性细胞表面生长的透镜状细胞的节段延伸轮廓。数字代表用于标记碳颗粒的数字。详见本期Mine等人。
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引用次数: 0
Confirmation of Neoporphyra cf. dentata on Shikinejima, Izu Islands, southcentral Japan, and comparison with co‐occurring Neoporphyra haitanensis 日本中南部伊豆群岛岛岛上新鼠海豚的确认(参见dentata),以及与同时发生的海地新鼠海豚比较
IF 1.5 4区 生物学 Q2 MARINE & FRESHWATER BIOLOGY Pub Date : 2023-04-30 DOI: 10.1111/pre.12522
Miku Okamoto, Airi Ikeura, M. Tamaki, K. Niwa
The Izu Islands of southcentral Japan are thought to fall within the distribution range of Neoporphyra dentata. However, the gametophytic blades of Bangiales collected from Shikinejima and Hachijojima, Izu Islands, were identified as Neoporphyra haitanensis in our previous study. Thus, it became uncertain whether N. dentata is distributed in the Izu Islands, including Shikinejima. To clarify whether N. dentata grows on Shikinejima, we conducted a further distribution survey of N. dentata on the island. The morphological features of the blade samples collected from an additional sampling site on Shikinejima were more similar to those of N. dentata than to those of N. haitanensis: the blade thickness and the division formula of spermatangia resembled those of the former species rather than the latter species. However, the division formula of zygotosporangia was different from those of either species. The phylogenetic analyses of the rbcL gene indicated that the samples were resolved in a clade including N. dentata collected from Shirahama, Chiba Prefecture, and Enoshima, Kanagawa Prefecture, Honshu, Japan. The p‐distances of the chloroplast rbcL gene and nuclear 18S rRNA also supported identification of the samples as N. dentata. The results demonstrated that N. dentata is also distributed on Shikinejima with co‐occurring N. haitanensis, and that the island materials of the two species are genetically different from other materials of the two species, respectively.
日本中南部的伊豆群岛被认为属于齿新鼠藻的分布范围。然而,在我们之前的研究中,从伊豆群岛的志根岛和八重岛采集的Bangiales的配子体叶片被鉴定为坛新鼠藻。因此,齿齿猪笼草是否分布在伊豆群岛(包括志根岛)变得不确定。为了明确齿猪笼草是否生长在岛上,我们对齿猪笼菜在岛上的分布进行了进一步的调查。从石根岛的另一个采样点采集的叶片样本的形态特征与齿猪笼草的形态特征更相似,而与坛猪笼草相似:受精巢的叶片厚度和分裂公式与前一种而非后一种相似。然而,合子孢子虫的分裂公式与任何一种都不同。rbcL基因的系统发育分析表明,这些样本被解析为一个分支,包括千叶县白滨和日本本州神奈川县隐岛的齿猪笼草。叶绿体rbcL基因和细胞核18S rRNA的p距离也支持将样品鉴定为齿猪笼草。结果表明,齿猪笼草也与共生的坛猪笼草分布在石龟岛上,并且这两个物种的岛屿材料分别与这两个种群的其他材料在基因上不同。
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引用次数: 0
Morphology and molecular phylogeny of the marine diatom genus Nagumoea (Bacillariophyceae) from Japan 日本海洋硅藻属(硅藻科)的形态和分子系统发育
IF 1.5 4区 生物学 Q2 MARINE & FRESHWATER BIOLOGY Pub Date : 2023-04-25 DOI: 10.1111/pre.12521
K. Sugawara, Hidekazu Suzuki, M. Kamiya, Keigo Osada, A. Witkowski
The canal‐bearing diatom genus Nagumoea, described based on only morphological evidence, was tentatively assigned to the order Bacillariales, although its phylogenetic position remained unclear. Because three isolates of Nagumoea (SK002, SK024 and SK053) were successfully established from Japanese coasts, we performed their morphological observations and molecular phylogenetic analyses to discuss the phylogeny and taxonomic position of this genus. Strains SK002 and SK024 were identified as Nagumoea africana, whereas SK053 conformed with Nagumoea serrata. There was high interspecific divergence between N. africana and N. serrata in the rbcL sequences (8.03–8.17%), indicating their distinctness. Furthermore, intraspecific variations were detected within N. africana (2.35%) in the rbcL, implying its cryptic diversity. The maximum likelihood and Bayesian phylogenetic trees inferred from the plastid rbcL, psbC and nuclear 18S rDNA genes recovered Nagumoea as monophyletic with strong statistical support and embedded within an unresolved, poorly supported lineage containing Achnanthes, Craspedostauros, Staurotropis and Undatella in the canal‐bearing order Bacillariales (= the family Bacillariaceae). Although the constrained tree based on the monophyly of Nagumoea and the other canal‐bearing clade (Surirellales and Rhopalodiales) was statistically rejected by the topology tests, the phylogenetic position of Nagumoea with other Bacillarialean members remains equivocal. The possession of two plastids positioned fore and aft, observed in the present study, and lack of keel, typical of the Bacillariales, indicate the possibility of Nagumoea being part of the ingroup of the Bacillariales or its closely related outgroup.
仅根据形态学证据描述的带管硅藻属Nagumoea,暂时被归入Bacillarales目,尽管其系统发育位置尚不清楚。由于从日本海岸成功建立了三个名瘤菌分离株(SK002、SK024和SK053),我们对它们进行了形态学观察和分子系统发育分析,以讨论该属的系统发育和分类地位。菌株SK002和SK024被鉴定为非洲名瘤菌,而SK053与锯齿名瘤菌一致。在rbcL序列中,非洲猪笼草和锯齿猪笼草之间存在较高的种间差异(8.03–8.17%),表明它们的差异性。此外,在rbcL中,在非洲猪笼草(2.35%)中检测到种内变异,这意味着其隐蔽的多样性。从质体rbcL、psbC和核18S rDNA基因推断出的最大似然和贝叶斯系统发育树将Nagumoea恢复为单系,具有强大的统计支持,并嵌入到一个未解决的、支持不足的谱系中,该谱系包含Bacillariales目(=Bacillariaceae科)中的Achnanthes、Craspedostauros、Staurotropis和Undatella。尽管基于Nagumoea和其他含管分支(Surirellales和Rhopalodiales)的单系的约束树在拓扑测试中被统计学拒绝,但Nagumoe与其他Bacillaralean成员的系统发育位置仍然模糊不清。在本研究中观察到,拥有两个位于前后的质体,并且缺乏龙骨,这是贝母目的典型特征,这表明Nagumoea可能是贝母目的内群或其密切相关的外群的一部分。
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引用次数: 0
Anisotropic cell growth and cell wall structure in lenticular cell of Valonia utricularis (Ulvophyceae) 圆叶球藻(Ulvophyceae)透镜状细胞的各向异性细胞生长和细胞壁结构
IF 1.5 4区 生物学 Q2 MARINE & FRESHWATER BIOLOGY Pub Date : 2023-04-05 DOI: 10.1111/pre.12520
I. Mine, Y. Inoue, Takuji Yamamoto, S. Sekida
During cell division of the giant‐celled green alga, Valonia utricularis, a lenticular cell is newly formed, which grows from disc‐shaped to globular to obovoid. During the early developmental stages of growth, the cell surface shows a remarkable outward protrusion. In the present study, the anisotropy of cell growth, i.e. the difference between cell surface extension in meridional and radial orientation, was investigated by analyzing the movement of the surface markers in a living cell. Growth was isotropic around the cell zenith but of two different kinds of anisotropic growth in other regions; radial extension was dominant in cell periphery and meridional extension in intermediate regions between zenith and periphery. Moreover, local orientation of cellulose microfibrils was observed on the inner surface of the cell wall during different stages of early development in lenticular cell using an atomic force microscope. Cellulose microfibrils showed meridional orientation overall and this phenomenon was most remarkable in the periphery of the cell, suggesting the possibility of cellulose microfibrils promoting radial extension of cells by suppressing meridional extension of cell wall.
在巨细胞绿藻三角藻的细胞分裂过程中,新形成了一个透镜状细胞,从圆盘状生长到球状,再生长到倒卵球形。在生长的早期发育阶段,细胞表面表现出显著的向外突起。在本研究中,通过分析活细胞中表面标记物的运动,研究了细胞生长的各向异性,即细胞表面在经向和径向延伸之间的差异。细胞天顶周围的生长是各向同性的,但在其他区域有两种不同类型的各向异性生长;径向伸展在细胞外围占主导地位,经向伸展在天顶和外围之间的中间区域。此外,在透镜状细胞早期发育的不同阶段,使用原子力显微镜观察到纤维素微纤维在细胞壁内表面的局部取向。纤维素微纤维总体上显示出经向取向,这种现象在细胞的外围最为显著,这表明纤维素微纤维可能通过抑制细胞壁的经向延伸来促进细胞的径向延伸。
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引用次数: 0
Issue Information 问题信息
IF 1.5 4区 生物学 Q2 MARINE & FRESHWATER BIOLOGY Pub Date : 2023-04-01 DOI: 10.1111/pre.12493
A tidal pool dinoflagellate, Chiharadinium hexapraecingulum (T. Horiguchi & Chihara) Dawut & T. Horiguchi gen. & comb. nov. Upper row: Light micrographs of lateral view, ventral view, epifluorescence micrograph of motile cells and scanning electron micrograph of apical view of a cell. Lower row: Scanning electron micrographs of ventral view, left lateral view and antapical view of motile cells. Establishment of a new genus Chiharadinium is reported by Dawut et al. in this issue.
潮池甲藻,Chiharadinium hexapraecingulum(T.Horiguchi&Chihara)Dawut&T.Horigchi gen.&comb。nov.上排:细胞的侧视图、腹视图、活动细胞的表观荧光显微照片和顶端视图的扫描电子显微照片。下排:运动细胞的腹侧视图、左侧视图和根尖前视图的扫描电子显微照片。Dawut等人在本期报道了一个新属Chiharadinium的建立。
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引用次数: 0
Novelties in nomenclature and typification appearing in Phycological Research 71 (2). 命名法和典型化方面的新颖性出现在《生态学研究》71(2)中。
IF 1.5 4区 生物学 Q2 MARINE & FRESHWATER BIOLOGY Pub Date : 2023-04-01 DOI: 10.1111/pre.12519
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引用次数: 0
Galactolipid composition of the star‐shaped dinoflagellate Asterodinium gracile (Kareniaceae): presence of hexadecatetraenoic acid (16:4(n‐3))‐containing monogalactosyldiacylglycerol as the predominant galactolipid and chemotaxonomic closeness to Karenia mikimotoi as the only other known Kareniacean 星形双鞭毛虫Asterodinium gracile (Kareniaceae)的半乳糖脂组成:含有16 -四烯酸(16:4(n‐3))-含单半乳糖二酰基甘油作为主要的半乳糖脂,并且在化学分类上与Karenia mikimotoi接近,是唯一已知的Kareniaceae
IF 1.5 4区 生物学 Q2 MARINE & FRESHWATER BIOLOGY Pub Date : 2023-03-20 DOI: 10.1111/pre.12518
Jeffrey D. Leblond, Braedyn E. Hollingsworth, Daniel Ayoub, Mackenzie B. Mckinnon, Chelsea S. Myers, Tawakalit J. Busari, Kyra Sabir
Asterodinium gracile is a morphologically distinct, star‐shaped member of the Kareniaceae with, like canonical Kareniaceae, a tertiary plastid of haptophyte origin. However, A. gracile's complement of carotenoid photosynthetic pigments has been shown to be chemotaxonomically atypical in that it possesses much less fucoxanthin when compared to that of other, canonical Kareniaceae in the genera Karenia, Karlodinium, and Takayama, also with a tertiary plastid of haptophyte origin. To date, Karenia mikimotoi, Karenia papilionacea, and Karenia selliformis are the only canonical Kareniaceae that have been shown to have a chemotaxonomically atypical carotenoid pigment composition in that they possess a gyroxanthin diester‐like carotenoid not observed in other species of Karenia, Karlodinium, or Takayama (recognizing that Karenia, in general, produces fucoxanthin derivatives not observed in Karlodinium or Takayama). As a photosynthetic organism, K. mikimotoi has been shown to resemble Karenia brevis such that both species possess the chloroplast‐associated galactolipids mono‐ and digalactosyldiacylglycerol (MGDG and DGDG, respectively) enriched with octadecapentaenoic acid (18:5(n‐3)) in the sn‐1 position, and hexadecenoic acid (16:0) and tetradecanoic acid (14:0) at the sn‐2 position. However, K. mikimotoi is chemotaxonomically atypical beyond its carotenoid composition in that it possesses MGDG and DGDG with hexadecatetraenoic acid (16:4(n‐3)), which has not been observed in any other members of the Kareniaceae, in the sn‐2 position as major galactolipids. The goal of this study was to characterize the galactolipids of A. gracile with the hypothesis that they would also be atypical when compared to other canonical Kareniaceae because of A. gracile's atypical carotenoid pigment composition. To this end, we report that like K. brevis and K. mikimotoi, A. gracile produces MGDG and DGDG enriched in 18:5(n‐3) at the sn‐1 position and C14 fatty acids, such as 14:0, at the sn‐2 position, and like K. mikimotoi, it produces 18:5(n‐3)/16:4(n‐3) MGDG, yet here as its most abundant galactolipid.
扁角蕨是蕨科的一个形态独特的星形成员,与典型蕨科一样,它是一个由附着体起源的第三纪质体。然而,与其他典型的Karenia属、Karlodinium属和Takayama属的Karenia科植物相比,a . gracile的类胡萝卜素光合色素补体已被证明是化学分类上不典型的,因为它的岩藻黄质要少得多,同样具有来自于附着体的第三纪质体。迄今为止,mikimotoi Karenia, Karenia papilionacea和Karenia selliformis是唯一被证明具有化学分类上非典型类胡萝卜素成分的典型Kareniaceae,因为它们具有在其他Karenia, Karlodinium或Takayama物种中未观察到的类陀旋黄质二酯(认识到Karenia通常产生在Karlodinium或Takayama中未观察到的岩藻黄质衍生物)。作为一种光合生物,K. mikimotoi已被证明与短Karenia相似,这两个物种都具有与叶绿体相关的半乳糖脂,分别含有十八碳五烯酸(18:5(n‐3))和十八碳六烯酸(16:0)和十四碳四酸(14:0),在sn‐1位置。然而,K. mikimotoi在化学分类上是不典型的,除了它的类胡萝卜素成分,因为它含有MGDG和DGDG,其中十六烯四烯酸(16:4(n‐3)),这在任何其他蛤兰科成员中都没有观察到,在sn‐2的位置作为主要的半乳糖脂。本研究的目的是表征的半乳糖脂与假设,他们也将是非典型的,当比较其他典型的角孢杆菌科,因为角孢杆菌的非典型类胡萝卜素的色素组成。为此,我们报道,与K. brevis和K. mikimotoi一样,A. gracile在sn‐1位置产生富含18:5(n‐3)脂肪酸的MGDG和DGDG,在sn‐2位置产生富含14:0脂肪酸的C14脂肪酸,与K. mikimotoi一样,它产生18:5(n‐3)/16:4(n‐3)MGDG,但这里是其最丰富的半乳糖脂。
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引用次数: 0
Stenomitos terricola sp. nov. (Leptolyngbyaceae, Cyanobacteria) from the moist soil of Mt. Gwanggyo, Republic of Korea 大韩民国光州山潮湿土壤中的Stenomitos terricola sp.nov.(细胞菌科,蓝细菌门)
IF 1.5 4区 生物学 Q2 MARINE & FRESHWATER BIOLOGY Pub Date : 2023-03-18 DOI: 10.1111/pre.12517
Nam‐Ju Lee, Do‐Hyun Kim, Ok‐Min Lee
Stenomitos terricola FBCC‐A190 was collected from soils around the trees of Mt. Gwanggyo, located in Yeongtong‐gu, Suwon‐si, Gyeonggi‐do. S. terricola FBCC‐A190 is a thin and simple filament with a cell length that is longer than its width. It has a thin and firm sheath, exhibiting a blue‐green color. Species belonging to genus Stenomitos is semi‐cryptic species with slight morphological differences from each other. They were confirmed as Stenomitos species by analysis using 16S rRNA and 16S–23S ITS. A monophyletic cluster was formed with the previously reported genus Stenomitos, with 16S rRNA gene sequences sharing similarities of 95.9–97.9% except for S. pantisii TAU‐MAC 4318. In addition, 16S–23S ITS gene sequencing showed tRNAAla, tRNAIle and V2, similar to the previously reported genus Stenomitos. From these results, Stenomitos terricola sp. nov. was proposed as a new species belonging to genus Stenomitos.
Stenomitos terricola FBCC‐A190是从位于京畿道水原寺杨同谷的光镜山树木周围的土壤中采集的。S.tericola FBCC‐A190是一种细而简单的细丝,细胞长度比宽度长。它有一个薄而坚固的鞘,呈现出蓝绿色。Stenomitos属的物种是半隐蔽物种,彼此之间有轻微的形态差异。通过使用16S rRNA和16S–23S ITS的分析,它们被确认为Stenomitos物种。与先前报道的Stenomitos属形成了一个单系簇,除S.pantisii TAU‐MAC 4318外,16S rRNA基因序列的相似性为95.9–97.9%。此外,16S–23S ITS基因测序显示tRNAAla、tRNAIle和V2,与之前报道的Stenomitos属相似。从这些结果来看,Stenomitos terricola sp.nov.被认为是Steromitos属的一个新种。
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引用次数: 0
Drouetiella epilithica sp. nov. and Drouetiella lurida (Oculatellaceae, Synechococcales) isolated in the Republic of Korea based on the polyphasic approach 基于多相方法在大韩民国分离的Droueella epilithica sp.nov.和Droueeiela lurida(Oculatellaceae,Synechococcales)
IF 1.5 4区 生物学 Q2 MARINE & FRESHWATER BIOLOGY Pub Date : 2023-03-09 DOI: 10.1111/pre.12515
Do‐Hyun Kim, Nam‐Ju Lee, Hye‐Ryeung Wang, A. Lim, Ok‐Min Lee
Five strains of Drouetiella (ACKU666, 667, 668, 669 and 670) were isolated from gravels in water, stone monument and coastal mudflat in Korea, and were studied using morphological and molecular traits. All five strains had thin and simple trichomes and exhibited false branching. From these strains, four strains (ACKU666, 667, 668 and 669) exhibited similar cell lengths with reddish–brown colored cells such as Drouetiella lurida. The 16S rRNA gene phylogeny showed the four strains formed a clade with Drouetiella lurida, and their DNA similarity was calculated to be 99.1–100%. The color of strain ACKU670 appeared to be in bright blue–green color like Drouetiella fasciculata, and their thylakoids showed a parietal arrangement, which is a characteristic feature of the family Oculatellaceae. Strain ACKU670 turned out to be a sister clade to the D. lurida according to the phylogenetic analysis of the 16S rRNA gene. The 16–23S rRNA internal transcribed spacer secondary folding structure (D1–D1′, Box‐B and V3 helices) confirmed the uniqueness of strain ACKU670, therefore indicating differences from the related species. Considering all the results, we described our strain ACKU670 as Drouetiella epilithica sp. nov. in accordance with the International Code of Nomenclature for Algae, Fungi and Plants.
从韩国水域、石碑和海岸泥滩的砾石中分离到5株杜洛埃氏菌(ACKU666、667、668、669和670),对其形态和分子特征进行了研究。5个菌株均具有单薄的毛状体和假分支。从这些菌株中,4株ACKU666、667、668和669的细胞长度与德鲁埃氏菌(Drouetiella lurida)等红褐色细胞相似。16S rRNA基因系统发育结果表明,4株菌株与德鲁埃氏菌属同源,DNA相似性为99.1 ~ 100%。菌株ACKU670的颜色呈与束状杜洛埃氏菌相似的亮蓝绿色,其类囊体呈顶状排列,这是眼苔科的特征。根据16S rRNA基因的系统发育分析,菌株ACKU670被证明是D. lurida的姐妹分支。16-23S rRNA内部转录间隔段二级折叠结构(D1-D1 ', Box‐B和V3螺旋)证实了菌株ACKU670的独特性,因此表明与相关物种存在差异。综合以上结果,根据《国际藻类、真菌和植物命名规范》,将菌株ACKU670命名为Drouetiella epilithica sp. 11。
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引用次数: 0
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Phycological Research
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