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Exploring the potential of drug repurposing for treating depression. 探索药物再利用治疗抑郁症的潜力。
3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-05-13 DOI: 10.1016/bs.pmbts.2024.03.037
Chaitenya Verma, Kritika Jain, Ashok Saini, Indra Mani, Vijai Singh

Researchers are interested in drug repurposing or drug repositioning of existing pharmaceuticals because of rising costs and slower rates of new medication development. Other investigations that authorized these treatments used data from experimental research and off-label drug use. More research into the causes of depression could lead to more effective pharmaceutical repurposing efforts. In addition to the loss of neurotransmitters like serotonin and adrenaline, inflammation, inadequate blood flow, and neurotoxins are now thought to be plausible mechanisms. Because of these other mechanisms, repurposing drugs has resulted for treatment-resistant depression. This chapter focuses on therapeutic alternatives and their effectiveness in drug repositioning. Atypical antipsychotics, central nervous system stimulants, and neurotransmitter antagonists have investigated for possible repurposing. Nonetheless, extensive research is required to ensure their formulation, effectiveness, and regulatory compliance.

由于成本上升和新药研发速度放缓,研究人员对现有药物的再利用或药物重新定位很感兴趣。其他授权这些治疗方法的调查使用了实验研究和标示外用药的数据。对抑郁症病因的更多研究可促使更有效的药品再定位工作。除了血清素和肾上腺素等神经递质的流失,炎症、血流量不足和神经毒素现在也被认为是合理的机制。由于存在这些其他机制,治疗耐药性抑郁症的药物也出现了用途调整。本章将重点介绍替代疗法及其在药物重新定位方面的有效性。非典型抗精神病药物、中枢神经系统兴奋剂和神经递质拮抗剂已被研究用于可能的再利用。然而,要确保这些药物的配方、有效性和合规性,还需要进行广泛的研究。
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引用次数: 0
Inhibitors of amyloid fibril formation. 淀粉样蛋白纤维形成抑制剂。
3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-04-22 DOI: 10.1016/bs.pmbts.2024.03.012
Elaheh Tavili, Fatemeh Aziziyan, Khosro Khajeh

Many diseases are caused by misfolded and denatured proteins, leading to neurodegenerative diseases. In recent decades researchers have developed a variety of compounds, including polymeric inhibitors and natural compounds, antibodies, and chaperones, to inhibit protein aggregation, decrease the toxic effects of amyloid fibrils, and facilitate refolding proteins. The causes and mechanisms of amyloid formation are still unclear, and there are no effective treatments for Amyloid diseases. This section describes research and achievements in the field of inhibiting amyloid accumulation and also discusses the importance of various strategies in facilitating the removal of aggregates species (refolding) in the treatment of neurological diseases such as chemical methods like as, small molecules, metal chelators, polymeric inhibitors, and nanomaterials, as well as the use of biomolecules (peptide and, protein, nucleic acid, and saccharide) as amyloid inhibitors, are also highlighted.

许多疾病都是由错误折叠和变性的蛋白质引起的,从而导致神经退行性疾病。近几十年来,研究人员开发了多种化合物,包括高分子抑制剂和天然化合物、抗体和伴侣素,以抑制蛋白质的聚集,降低淀粉样纤维的毒性作用,并促进蛋白质的重新折叠。淀粉样蛋白形成的原因和机制尚不清楚,淀粉样蛋白疾病也没有有效的治疗方法。本节介绍了在抑制淀粉样蛋白积累领域的研究和成就,还讨论了在治疗神经系统疾病中促进清除聚集物种(重折叠)的各种策略的重要性,如化学方法,如小分子、金属螯合剂、聚合物抑制剂和纳米材料,以及使用生物大分子(肽和蛋白质、核酸和糖类)作为淀粉样蛋白抑制剂。
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引用次数: 0
CRISPR-Cas based genome editing for eradication of human viruses. 基于 CRISPR-Cas 的基因组编辑技术,用于根除人类病毒。
3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-08-17 DOI: 10.1016/bs.pmbts.2024.07.012
Dharmisha Solanki, Karan Murjani, Vijai Singh

Clustered regularly interspaced short palindromic repeats (CRISPR)-Cas system possess a broad range of applications for genetic modification, diagnosis and treatment of infectious as well as non-infectious disease. The CRISPR-Cas system is found in bacteria and archaea that possess the Cas protein and guide RNA (gRNA). Cas9 and gRNA forms a complex to target and cleave the desired gene, providing defense against viral infections. Human immunodeficiency virus (HIV), hepatitis B virus (HBV), herpesviruses, human papillomavirus (HPV), and severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) cause major life threatening diseases which cannot cure completely by drugs. This chapter describes the present strategy of CRISPR-Cas systems for altering the genomes of viruses, mostly human ones, in order to control infections.

簇状规则间隔短回文重复序列(CRISPR)-Cas 系统在遗传修饰、诊断和治疗传染性和非传染性疾病方面有着广泛的应用。CRISPR-Cas 系统存在于拥有 Cas 蛋白和引导 RNA(gRNA)的细菌和古细菌中。Cas9 和 gRNA 形成复合物,靶向并切割所需的基因,从而抵御病毒感染。人类免疫缺陷病毒(HIV)、乙型肝炎病毒(HBV)、疱疹病毒、人类乳头状瘤病毒(HPV)和严重急性呼吸系统综合征冠状病毒-2(SARS-CoV-2)会导致严重的生命危险,药物无法完全治愈。本章介绍了目前 CRISPR-Cas 系统改变病毒(主要是人类病毒)基因组以控制感染的策略。
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引用次数: 0
Recent development in CRISPR-Cas systems for human protozoan diseases. 针对人类原生动物疾病的 CRISPR-Cas 系统的最新发展。
3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-08-17 DOI: 10.1016/bs.pmbts.2024.07.010
Utkarsh Gangwar, Himashree Choudhury, Risha Shameem, Yashi Singh, Abhisheka Bansal

Protozoan parasitic diseases pose a substantial global health burden. Understanding the pathogenesis of these diseases is crucial for developing intervention strategies in the form of vaccine and drugs. Manipulating the parasite's genome is essential for gaining insights into its fundamental biology. Traditional genomic manipulation methods rely on stochastic homologous recombination events, which necessitates months of maintaining the cultured parasites under drug pressure to generate desired transgenics. The introduction of mega-nucleases (MNs), zinc-finger nucleases (ZFNs), and transcription activator-like effector nucleases (TALENs) greatly reduced the time required for obtaining a desired modification. However, there is a complexity associated with the design of these nucleases. CRISPR (Clustered regularly interspaced short palindromic repeats)/Cas (CRISPR associated proteins) is the latest gene editing tool that provides an efficient and convenient method for precise genomic manipulations in protozoan parasites. In this chapter, we have elaborated various strategies that have been adopted for the use of CRISPR-Cas9 system in Plasmodium, Leishmania and Trypanosoma. We have also discussed various applications of CRISPR-Cas9 pertaining to understanding of the parasite biology, development of drug resistance mechanism, gene drive and diagnosis of the infection.

原生动物寄生虫病给全球健康造成了巨大负担。了解这些疾病的发病机理对于开发疫苗和药物等干预策略至关重要。操纵寄生虫的基因组对于深入了解其基本生物学特性至关重要。传统的基因组操作方法依赖于随机同源重组事件,这就需要将培养的寄生虫在药物压力下维持数月,以产生所需的转基因。巨型核酸酶(MNs)、锌指核酸酶(ZFNs)和转录激活剂样效应核酸酶(TALENs)的引入大大缩短了获得所需修饰所需的时间。不过,这些核酸酶的设计也有其复杂性。CRISPR(Clustered regularly interspaced short palindromic repeats)/Cas(CRISPR 相关蛋白)是最新的基因编辑工具,为原生动物寄生虫基因组的精确操作提供了高效便捷的方法。在本章中,我们阐述了在疟原虫、利什曼原虫和锥虫中使用 CRISPR-Cas9 系统的各种策略。我们还讨论了 CRISPR-Cas9 在了解寄生虫生物学、开发抗药机制、基因驱动和诊断感染方面的各种应用。
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引用次数: 0
Breakthroughs in synthetic controlling strategies for precision in CAR-T therapy. 为实现 CAR-T 疗法的精确性而制定的合成控制策略取得突破性进展。
3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-02-22 DOI: 10.1016/bs.pmbts.2024.02.002
Wang Tik Tang, Ryohichi Sugimura

Chimeric antigen receptors (CAR) are synthetic receptors engineered to target a user-defined antigen. They comprise an extracellular single-chain variable fragment for target recognition and intracellular signalling domains commonly derived from immune cells. CAR-T cells have proven to be successful in therapy of some cancers. CAR-T cells are activated upon antigen-priming and subsequent intracellular signalling. However, tonic signalling in CAR-T cells remains a challenge in developing CAR-T therapeutics of high efficacy as it causes early T-cell exhaustion, limiting therapeutic persistence. Moreover, a poor choice of target antigen leads to off-target cytotoxicity, often hampering the host's survival. In addition, conventional methods of delivering CAR gene circuits utilise viral vectors, such as lentiviruses and retroviruses, which insert the CAR gene circuits into transcriptionally active sites in the genome. This increases the risks of malignant transformation due to improper genome integration. Optimisation in CAR-T engineering, from the architecture of CAR gene circuits to the structure of CAR and the behaviour of CAR-T cells, is paramount to ensure high efficacy, persistence, and precision in CAR-T therapy. This review provides insights into engineering CAR-T cells for precision in cancer therapy by highlighting the key strategies recently developed to optimise the function and efficiency of CARs. The delivery method of CAR gene circuits, circuit and structural modification of CAR, T-cell phenotype manipulation and T-cell arming will be discussed to accentuate their interplay in regulating CAR-T therapy's safety, precision, and efficacy.

嵌合抗原受体(CAR)是针对用户定义的抗原而设计的合成受体。它们由用于识别目标的胞外单链可变片段和通常来自免疫细胞的胞内信号结构域组成。事实证明,CAR-T 细胞可成功治疗某些癌症。CAR-T 细胞通过抗原刺激和随后的细胞内信号传导被激活。然而,CAR-T 细胞中的强直信号仍是开发高效 CAR-T 疗法的一个挑战,因为它会导致 T 细胞早期衰竭,从而限制治疗的持续性。此外,靶抗原选择不当会导致脱靶细胞毒性,往往会妨碍宿主的生存。此外,传递 CAR 基因回路的传统方法利用慢病毒和逆转录病毒等病毒载体,将 CAR 基因回路插入基因组中转录活跃的位点。由于基因组整合不当,这增加了恶性转化的风险。要确保CAR-T疗法的高效性、持久性和精确性,就必须优化CAR-T工程,从CAR基因回路的架构到CAR的结构以及CAR-T细胞的行为。本综述通过重点介绍最近开发的优化 CAR 功能和效率的关键策略,深入探讨如何通过 CAR-T 细胞工程实现癌症治疗的精准性。将讨论 CAR 基因回路的传递方法、CAR 的回路和结构改造、T 细胞表型操作和 T 细胞武装,以强调它们在调节 CAR-T 疗法的安全性、精确性和有效性方面的相互作用。
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引用次数: 0
Immunotherapy outcomes in non-small cell lung cancer according to a gender perspective. 从性别角度看非小细胞肺癌的免疫疗法效果。
3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-10-11 DOI: 10.1016/bs.pmbts.2024.09.004
Tiziana Vavalà

In the last few years, immune checkpoint inhibitors (ICIs) improved treatment strategies for advanced non-small cell lung cancer (NSCLC) with no targetable driver mutations. Empirical evidence strongly suggests that males and females differ in outcomes following the use of ICIs for treatments of solid cancers. Women in fact exhibit greater humoral and cell-mediated immune responses and an even more advanced immune editing which plays an important role in controlling cancer rising and evolution. However, at present, no conclusive studies have addressed differences in response to ICIs regarding sex and, to note, reproductive status in women or autoimmune diseases in both sexes are often not recorded in clinical trials. Consequently, it can be argued that to assess cancer responses and study cancer spread, results of published studies in men may not unconditionally be applied on female patients treated with ICIs, and vice versa. In this chapter have been discussed recent data about gender differences in the immune system and in NSCLC patients treated with ICIs, highlighting sex as a key factor in evaluating different responses in the two sexes.

过去几年中,免疫检查点抑制剂(ICIs)改善了无靶向驱动突变的晚期非小细胞肺癌(NSCLC)的治疗策略。经验证据有力地表明,使用 ICIs 治疗实体瘤后,男性和女性的疗效有所不同。事实上,女性表现出更强的体液和细胞介导的免疫反应,甚至更先进的免疫编辑,这在控制癌症上升和进化方面发挥着重要作用。然而,目前还没有针对 ICIs 的性别差异反应的确凿研究,而且值得注意的是,女性的生殖状况或两性的自身免疫性疾病在临床试验中往往没有记录。因此,可以说在评估癌症反应和研究癌症扩散时,已发表的男性研究结果不能无条件地应用于接受 ICIs 治疗的女性患者,反之亦然。本章讨论了有关免疫系统和接受 ICIs 治疗的 NSCLC 患者的性别差异的最新数据,强调性别是评估两性不同反应的关键因素。
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引用次数: 0
Advances in RNA therapeutics for modulation of 'undruggable' targets. 调节 "不可药用 "靶点的 RNA 疗法的进展。
3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-01-17 DOI: 10.1016/bs.pmbts.2023.12.003
Emily Martinsen, Tasmia Jinnurine, Saranya Subramani, Marie Rogne

Over the past decades, drug discovery utilizing small pharmacological compounds, fragment-based therapeutics, and antibody therapy have significantly advanced treatment options for many human diseases. However, a major bottleneck has been that>70% of human proteins/genomic regions are 'undruggable' by the above-mentioned approaches. Many of these proteins constitute essential drug targets against complex multifactorial diseases like cancer, immunological disorders, and neurological diseases. Therefore, alternative approaches are required to target these proteins or genomic regions in human cells. RNA therapeutics is a promising approach for many of the traditionally 'undruggable' targets by utilizing methods such as antisense oligonucleotides, RNA interference, CRISPR/Cas-based genome editing, aptamers, and the development of mRNA therapeutics. In the following chapter, we will put emphasis on recent advancements utilizing these approaches against challenging drug targets, such as intranuclear proteins, intrinsically disordered proteins, untranslated genomic regions, and targets expressed in inaccessible tissues.

在过去的几十年里,利用小型药理化合物、片段疗法和抗体疗法进行的药物发现大大推进了许多人类疾病的治疗方案。然而,一个主要的瓶颈是,70% 以上的人类蛋白质/基因组区域是上述方法 "无法治疗 "的。其中许多蛋白质是治疗癌症、免疫性疾病和神经系统疾病等复杂的多因素疾病的重要药物靶点。因此,需要采用其他方法来靶向人体细胞中的这些蛋白质或基因组区域。通过利用反义寡核苷酸、RNA 干扰、基于 CRISPR/Cas 的基因组编辑、aptamers 和 mRNA 疗法的开发等方法,RNA 疗法是一种很有前景的方法,可用于许多传统上 "无法药物治疗 "的靶点。在下一章中,我们将重点介绍利用这些方法对付具有挑战性的药物靶点的最新进展,例如核内蛋白、内在紊乱蛋白、非翻译基因组区以及在无法进入的组织中表达的靶点。
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引用次数: 0
RNA therapeutics for regenerative medicine. 用于再生医学的 RNA 疗法。
3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-01-24 DOI: 10.1016/bs.pmbts.2023.12.002
Yen Vy Nguyen Thi, Anh Dao Ngo, Dinh-Toi Chu, Sheng-Che Lin, Chia-Ching Wu

It is estimated that millions of people around the world experience various types of tissue injuries every year. Regenerative medicine was born and developed for understanding and application with the aim of replacing affected organs or some cells. The research, manufacture, production, and distribution of RNA in cells have acted as a basic foundation for the development and testing of therapies and treatments that are widely applied in different fields of medicine. Vaccines against COVID-19 are considered one of the brilliant and outstanding successes of RNA therapeutics research. With the characteristics of bio-derived RNA therapeutics, the mechanism of rapid implementation, safe production, and flexibility to create proteins depending on actual requirements. Based on the advantages above in this review, we discuss RNA therapeutics for regenerative medicine, and the types of RNA therapies currently being used for regenerative medicine. The relationship between disease and regenerative medicine is currently being studied or tested in RNA therapeutics. We have also covered the mechanisms of action of RNA therapy for regenerative medicine and some of the limitations in our current understanding of the effects of RNA therapy in this area. Additionally, we have also covered developing RNA therapeutics for regenerative medicine, focusing on RNA therapeutics for regenerative medicine. As a final point, we discuss potential applications for therapeutics for regenerative medicine in the future, as well as their mechanisms.

据估计,全世界每年有数百万人遭受各种组织损伤。再生医学应运而生,并在理解和应用方面得到发展,其目的是替换受影响的器官或某些细胞。RNA在细胞中的研究、制造、生产和分布为开发和测试广泛应用于不同医学领域的疗法和治疗方法奠定了基础。针对 COVID-19 的疫苗被认为是 RNA 疗法研究的辉煌成就之一。RNA 疗法具有生物衍生的特点,其机制实施迅速、生产安全、可根据实际需求灵活创建蛋白质。基于上述优势,我们在本综述中讨论了再生医学中的 RNA 疗法,以及目前用于再生医学的 RNA 疗法类型。目前,RNA 疗法正在研究或测试疾病与再生医学之间的关系。我们还介绍了用于再生医学的 RNA 疗法的作用机制,以及我们目前对该领域中 RNA 疗法效果的理解存在的一些局限性。此外,我们还介绍了用于再生医学的 RNA 疗法的开发,重点关注用于再生医学的 RNA 疗法。最后,我们讨论了再生医学疗法在未来的潜在应用及其机制。
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引用次数: 0
Future insights. 未来展望。
3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2023-12-21 DOI: 10.1016/bs.pmbts.2023.11.004
Asiya Kamber Zaidi

This chapter explores two significant aspects of the ongoing COVID-19 pandemic: the realistic prediction of its end and the status of long-term COVID in 2023. While the World Health Organization (WHO) declared an end to COVID-19 as a public health emergency, the possibility of future waves caused by variants remains. Widespread vaccination and prior infections provide substantial protection, but the virus is expected to persist, necessitating continued monitoring and potential reimplementation of control measures. Long-term COVID, characterized by persistent or new symptoms after the acute phase, remains a concern. Recent findings suggest a reduced risk of prolonged COVID with initial Omicron variants. However, targeted treatments are lacking, and current approaches rely on symptomatic and supportive care. Psychological support and multidisciplinary interventions are essential. Comprehensive studies, standardized criteria, and international registries are needed to advance research and develop effective therapies. Understanding these uncertainties will guide us towards effectively managing the pandemic and providing optimal care for long COVID patients.

本章探讨了正在进行的 COVID-19 大流行的两个重要方面:对其结束的现实预测和 2023 年长期 COVID 的状况。尽管世界卫生组织(WHO)宣布 COVID-19 作为公共卫生紧急事件已经结束,但未来由变种引起的大流行的可能性依然存在。广泛的疫苗接种和先前的感染提供了大量的保护,但预计病毒仍将持续存在,因此有必要继续监测并可能重新实施控制措施。以急性期后持续或出现新症状为特征的长期 COVID 仍令人担忧。最近的研究结果表明,使用最初的 Omicron 变体可降低长期 COVID 的风险。然而,目前还缺乏有针对性的治疗方法,目前的方法主要依靠对症治疗和支持性护理。心理支持和多学科干预至关重要。要推进研究和开发有效的疗法,需要进行全面的研究、制定标准化标准和建立国际登记册。了解这些不确定因素将指导我们有效地管理这一流行病,并为长期感染 COVID 的患者提供最佳护理。
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引用次数: 0
SARS-CoV-2-Virus structure and life cycle. SARS-CoV-2 病毒的结构和生命周期。
3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-01-04 DOI: 10.1016/bs.pmbts.2023.09.001
Sameer Saleem Tebha, Aimen Tameezuddin, Sanchit Bajpai, Asiya Kamber Zaidi

This book chapter presents a concise overview of SARS-CoV-2, the virus responsible for the COVID-19 pandemic. It explores viral classification based on morphology and nucleic acid composition with a focus on DNA and RNA viruses, the SARS-CoV-2 structure including the structural as well as nonstructural proteins in detail, and the viral replication mechanisms. The chapter then delves into the characteristics and diversity of coronaviruses, particularly SARS-CoV-2, highlighting its similarities with other beta-coronaviruses. The replication and transcription complex, RNA elongation, and capping, as well as the role of accessory proteins in viral replication and modulation of the host immune response is discussed extensively.

本书简明扼要地概述了导致 COVID-19 大流行的 SARS-CoV-2 病毒。它探讨了基于形态和核酸组成的病毒分类(重点是 DNA 和 RNA 病毒)、SARS-CoV-2 的结构(包括结构蛋白和非结构蛋白的细节)以及病毒复制机制。然后,本章深入探讨了冠状病毒,特别是 SARS-CoV-2 的特征和多样性,强调了它与其他β-冠状病毒的相似之处。本章广泛讨论了复制和转录复合体、RNA 延长和封顶,以及辅助蛋白在病毒复制和调节宿主免疫反应中的作用。
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引用次数: 0
期刊
Progress in molecular biology and translational science
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