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Identification of AdipoRon analogues as novel activators of AMPK for the treatment of type 2 diabetes† 将 AdipoRon 类似物鉴定为治疗 2 型糖尿病的新型 AMPK 激活剂
IF 4.1 4区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-21 DOI: 10.1039/D3MD00727H
Chao Lin, Geng Sun and Yi Li

The activation of AMPK has emerged as a promising therapeutic approach for the treatment of metabolic diseases. AdipoRon, an agonist of the adiponectin receptor, has been identified as a compound capable of activating AMPK via the adiponectin receptor. To identify novel AdipoRon analogues with AMPK activation potential, a total of 17 analogues were designed, synthesized, and subjected to biological evaluation. Among these analogues, X-12 was discovered to exhibit potent activation of AMPK. In experimental studies, X-12 demonstrated dose-dependent improvements in glucose tolerance in normal mice. Furthermore, it significantly reduced fasting blood glucose levels and ameliorated insulin resistance in db/db diabetic mice. These findings highlight the therapeutic potential of X-12 as a novel class of AMPK activators for the treatment of metabolic diseases.

激活 AMPK 已成为治疗代谢性疾病的一种很有前景的治疗方法。AdipoRon是一种脂肪连接素受体的激动剂,已被确认为一种能够通过脂肪连接素受体激活AMPK的化合物。为了找出具有激活 AMPK 潜力的新型 AdipoRon 类似物,我们设计、合成了共 17 种类似物,并对其进行了生物学评估。在这些类似物中,X-12 被发现能有效激活 AMPK。在实验研究中,X-12 对正常小鼠葡萄糖耐量的改善具有剂量依赖性。此外,它还能明显降低 db/db 糖尿病小鼠的空腹血糖水平并改善胰岛素抵抗。这些发现凸显了 X-12 作为一类新型 AMPK 激活剂治疗代谢性疾病的潜力。
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引用次数: 0
Design, synthesis and biological evaluation of arylsulfonamides as ADAMTS7 inhibitors† 作为 ADAMTS7 抑制剂的芳基磺酰胺类化合物的设计、合成和生物学评价
IF 4.1 4区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-19 DOI: 10.1039/D4MD00149D
Doretta Cuffaro, Tina Burkhard, Bianca Laura Bernardoni, Riccardo Di Leo, Xiaohan Zhang, Salvatore Galati, Tiziano Tuccinardi, Marco Macchia, Armando Rossello, Salvatore Santamaria, Rens de Groot and Elisa Nuti

The proteolytic activity of the enzyme ADAMTS7 was recently shown to enhance the progression of atherosclerosis, in line with human genetic findings suggesting that ADAMTS7 has a role in the pathophysiology of coronary heart disease. Targeting the active site of ADAMTS7 with a small molecule inhibitor, therefore, has therapeutic potential. Here, we report the design and synthesis of a novel hydroxamate-based arylsulfonamide that is a potent and selective ADAMTS7 inhibitor. In silico studies guided the hit optimization process aiming to improve selectivity of the previously reported (non-selective) inhibitor EDV33. Our lead compound is a p-trifluoromethyl biphenyl sulfonamide, which displayed a 12-fold selectivity for ADAMTS7 (Ki = 9 nM) over ADAMTS5 (Ki = 110 nM) and an 8-fold increase in inhibition of ADAMTS7 compared to EDV33 (Ki = 70 nM). The substitutions switched selectivity and produced a new potent ADAMTS7 inhibitor that can be taken forward for further characterisation.

最近的研究表明,ADAMTS7 酶的蛋白水解活性可促进动脉粥样硬化的发展,这与人类基因研究结果一致,表明 ADAMTS7 在冠心病的病理生理学中发挥作用。因此,用小分子抑制剂靶向 ADAMTS7 的活性位点具有治疗潜力。在此,我们报告了一种新型羟酰胺基芳基磺酰胺的设计与合成,它是一种强效且具有选择性的 ADAMTS7 抑制剂。硅学研究指导了靶点优化过程,旨在提高之前报道的(非选择性)抑制剂 EDV33 的选择性。我们的先导化合物是一种对三氟甲基联苯磺酰胺,它对 ADAMTS7(Ki = 9 nM)的选择性是 ADAMTS5(Ki = 110 nM)的 12 倍,对 ADAMTS7 的抑制作用是 EDV33(Ki = 70 nM)的 8 倍。这些置换转换了选择性,产生了一种新的强效 ADAMTS7 抑制剂,可用于进一步表征。
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引用次数: 0
Correction: Discovery of dibenzylbutane lignan LCA derivatives as potent anti-inflammatory agents 更正:发现作为强效抗炎剂的二苄基丁烷木质素 LCA 衍生物
IF 4.1 4区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-17 DOI: 10.1039/D4MD90023E
Zhen Wang, Juan Zhang, Conghao Gai, Jing Wang, Xiaobin Zhuo, Yan Song, Yan Zou, Peichao Zhang, Guige Hou, Qingguo Meng, Qingjie Zhao and Xiaoyun Chai

Correction for ‘Discovery of dibenzylbutane lignan LCA derivatives as potent anti-inflammatory agents’ by Zhen Wang et al., RSC Med. Chem., 2024, https://doi.org/10.1039/d4md00053f.

对 Zhen Wang 等人的文章 "Discovery of dibenzylbutane lignan LCA derivatives as potent anti-inflammatory agents "的更正,RSC Med.Chem., 2024, https://doi.org/10.1039/d4md00053f.
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引用次数: 0
Synthesis and in vitro evaluation of novel amino-phenylmethylene-imidazolone 5-HT2A receptor antagonists† 新型氨基苯亚甲基咪唑酮 5-HT2A 受体拮抗剂的合成与体外评估
IF 4.1 4区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-14 DOI: 10.1039/D4MD00262H
Gregory E. Dwulet

Many drugs target the serotonin 2A (5-HT2A) receptor, including psychedelics, antidepressants, and antipsychotics. This study investigates the 5-HT2A receptor-binding properties of a series of novel compounds with an amino-phenylmethylene-imidazolone (APMI) core structure. Two compounds (2a and 2c) demonstrated significant 5-HT2A receptor-binding affinity without agonistic activity, instead displaying antagonistic effects. Structurally, these compounds differ from previously reported phenethylamine-based antagonists. This work introduces APMIs as a novel pharmacophore for 5-HT2A receptor interaction and provides a foundation for developing new 5-HT2A receptor-targeting therapeutic agents.

许多药物都以血清素 2A(5-HT2A)受体为靶点,包括迷幻药、抗抑郁药和抗精神病药。本研究调查了一系列具有氨基苯亚甲基咪唑啉酮(APMI)核心结构的新型化合物的 5-HT2A 受体结合特性。其中两种化合物(2a 和 2c)显示出明显的 5-HT2A 受体结合亲和力,但没有激动活性,而是显示出拮抗作用。从结构上看,这些化合物与之前报道的苯乙胺类拮抗剂不同。这项研究将 APMIs 介绍为 5-HT2A 受体相互作用的一种新药源,为开发新的 5-HT2A 受体靶向治疗药物奠定了基础。
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引用次数: 0
Correction: Highly potent and selective phosphatidylinositol 4-kinase IIIβ inhibitors as broad-spectrum anti-rhinoviral agents 更正:作为广谱抗鼻病毒药物的高效力和选择性磷脂酰肌醇 4- 激酶 IIIβ 抑制剂
IF 4.1 4区 医学 Q1 Chemistry Pub Date : 2024-06-12 DOI: 10.1039/D4MD90022G
Avinash G. Vishakantegowda, Dasom Hwang, Prashant Chakrasali, Eunhye Jung, Joo-Youn Lee, Jin Soo Shin and Young-Sik Jung

Correction for ‘Highly potent and selective phosphatidylinositol 4-kinase IIIβ inhibitors as broad-spectrum anti-rhinoviral agents’ by Avinash G. Vishakantegowda et al., RSC Med. Chem., 2024, 15, 704–719, https://doi.org/10.1039/D3MD00630A.

对 Avinash G. Vishakantegowda 等人发表的 "作为广谱抗鼻病毒药物的高效力和选择性磷脂酰肌醇 4- 激酶 IIIβ 抑制剂 "的更正。Vishakantegowda 等人,RSC Med.Chem.,2024,15,704-719,https://doi.org/10.1039/D3MD00630A。
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引用次数: 0
From traditional medicine to nanomedicine: potential of Ginkgo biloba extracts in treating inflammatory skin diseases 从传统医学到纳米医学:银杏叶提取物治疗炎症性皮肤病的潜力
IF 4.1 4区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-11 DOI: 10.1039/D4MD00194J
Itisha Chummun Phul, Andrea Gómez-Llonín and Archana Bhaw-Luximon

The use of plant extracts as a potential cure for various conditions has moved from traditional medicine to evidence-based medicine. Skin diseases have been addressed since time immemorial using plant extracts through observational and traditional knowledge and passed on through generations. With the advent of modern techniques, the molecular mechanisms of action of plant extracts/isolates are being deciphered with more precision, and more nanomedicine-based therapies are being studied to improve their therapeutic efficacy and stability. The leaves and seeds of Ginkgo biloba (G. biloba), an ancient medicinal tree species, have been used in Chinese herbal medicine for thousands of years. G. biloba extracts have been widely studied as a neuroprotective and anti-ischaemic drug for ischaemia-reperfusion injuries in the heart, lungs, brain, kidneys, and other organs. However, the use of G. biloba can be accompanied with side effects and drug interactions. Although, there is now a growing interest for its use in skincare, the mechanisms of action of the extract are not fully understood and vital aspects of G. biloba, such as its neuroprotective and angiogenic properties contributing to the treatment of inflammatory skin diseases and skin ageing, are yet to be investigated. This review critically discusses the mechanisms of action of different constituents of G. biloba extracts linked to their potential interference in the molecular mechanisms underlying the pathogenesis of inflammatory skin diseases. In addition to its ability to act on oxidative stress, G. biloba can regulate angiogenesis through its compounds such as ginkgetin or ginkgolide K, which either inhibit aberrant angiogenesis in eczema/psoriasis or increase microcirculation during skin ageing. G. biloba may also contribute to the control of pruritus in atopic dermatitis via a neuroprotective and anti-inflammatory mechanism by suppressing JAK2/STAT3 signalling pathways. This review also highlights nanomedicine strategies to decrease the side effects and enhance the efficacy of the extracts. Similar strategies have been successfully used for anticancer molecules in targeted chemotherapy and iron delivery in anaemia treatment.

使用植物提取物作为治疗各种疾病的潜在方法,已经从传统医学转变为循证医学。自古以来,人们就通过观察和传统知识,利用世代相传的植物提取物来治疗皮肤病。随着现代技术的发展,植物提取物/分离物的分子作用机制正在被更精确地破解,更多基于纳米药物的疗法正在研究之中,以提高其疗效和稳定性。银杏叶(G. biloba)是一种古老的药用树种,其叶子和种子被用于中草药已有数千年的历史。银杏叶提取物作为一种神经保护和抗缺血药物已被广泛研究,用于治疗心、肺、脑、肾和其他器官的缺血再灌注损伤。然而,使用 G. biloba 可能会产生副作用和药物相互作用。虽然现在人们对其在护肤品中的应用越来越感兴趣,但对其提取物的作用机制还不完全了解,而且其重要的方面,如有助于治疗炎症性皮肤病和皮肤老化的神经保护和血管生成特性,还有待研究。这篇综述批判性地讨论了双叶鹅掌楸萃取物不同成分的作用机制,以及它们对炎症性皮肤病发病机制的潜在干扰。除了对氧化应激有作用外,银杏叶还能通过其化合物(如银杏黄酮或银杏内酯 K)调节血管生成,从而抑制湿疹/银屑病中异常的血管生成,或在皮肤老化过程中增加微循环。银杏叶还可通过抑制 JAK2/STAT3 信号通路,以神经保护和抗炎机制控制特应性皮炎的瘙痒。本综述还重点介绍了减少副作用和提高提取物功效的纳米药物策略。类似的策略已成功用于靶向化疗中的抗癌分子和贫血治疗中的铁输送。
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引用次数: 0
Rhodanine derived enethiols react to give 1,3-dithiolanes and mixed disulfides† 罗丹宁衍生烯硫醇反应生成 1,3-二硫环和混合二硫化物
IF 4.1 4区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-05 DOI: 10.1039/D4MD00157E
Jos J. A. G. Kamps, Dong Zhang, Timothy D. W. Claridge and Christopher J. Schofield

Rhodanines have been characterised as ‘difficult to progress’ compounds for medicinal use, though one rhodanine is used for diabetes mellitus treatment and others are in clinical development. Rhodanines can undergo hydrolysis to enethiols which are inhibitors of metallo-enzymes, such as metallo β-lactamases. We report that in DMSO, rhodanine derived enethiols undergo dimerisations to give 1,3-dithiolanes and mixed disulfides. The results highlight the potential of rhodanines and enethiols to give multiple products. They suggest that where possible DMSO should be avoided as a storage solvent for rhodanines/enethiols and highlight the need for further research on biologically relevant enethiols/mixed disulfides.

尽管有一种罗丹宁被用于治疗糖尿病,其他一些罗丹宁化合物也在临床开发中,但罗丹宁化合物一直被认为是 "难以取得进展 "的药用化合物。罗丹宁可以水解成烯硫醇,而烯硫醇是金属酶(如金属β-内酰胺酶)的抑制剂。我们报告说,在二甲基亚砜中,罗丹宁衍生的烯硫醇会发生二聚反应,生成 1,3-二硫环和混合二硫化物。这些结果凸显了罗丹宁和烯硫醇生成多种产物的潜力。这些结果表明,在可能的情况下,应避免将二甲基亚砜作为罗丹宁/烯硫醇的储存溶剂,并强调了进一步研究与生物相关的烯硫醇/混合二硫化物的必要性。
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引用次数: 0
Discovery of first-in-class PROTACs targeting maternal embryonic leucine zipper kinase (MELK) for the treatment of Burkitt lymphoma† 发现针对母体胚胎亮氨酸拉链激酶 (MELK) 的一流 PROTACs,用于治疗伯基特淋巴瘤
IF 4.1 4区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-04 DOI: 10.1039/D4MD00252K
Yonghui Sun, Xiao Liu, Qiyu He, Naizhen Zhang, Wei Yan, Xucheng Lv and Yanjie Wang

Maternal embryonic leucine zipper kinase (MELK) is a novel target for the treatment of various kinds of B-cell malignancies. However, the toxicity of inhibitors of MELK has led to clinical failures in cancer treatments. Moreover, inactivation of MELK catalytic domain is insufficient for achieving cancer cell apoptosis. To further confirm the role of MELK in Burkitt lymphoma treatment, we describe herein a structure-guided design of PROTACs targeting MELK. Through design, computer-assisted optimization and SAR studies, we developed the first-in-class MELK-targeting PROTAC MGP-39, which promoted a rapid and potent degradation of MELK in RAMOS cells. Additionally, the newly designed MELK degrader induced significant cell cycle arrest and apoptosis in cancer cells. Notably, compared to MELK inhibitors, MGP-39 has better anti-cancer activity and lower toxicity, indicating the practical role of PROTACs in avoiding the side effects of traditional inhibitors. More importantly, our results show that the use of a PROTAC can be adopted as a general and effective strategy for targeted cancer therapy.

母体胚胎亮氨酸拉链激酶(MELK)是治疗各种B细胞恶性肿瘤的新靶点。然而,MELK 抑制剂的毒性导致了癌症治疗的临床失败。此外,灭活 MELK 催化域不足以实现癌细胞凋亡。为了进一步证实 MELK 在伯基特淋巴瘤治疗中的作用,我们在本文中介绍了以 MELK 为靶点的 PROTACs 结构指导设计。通过设计、计算机辅助优化和 SAR 研究,我们开发出了首个 MELK 靶向 PROTAC MGP-39,它能促进 MELK 在 RAMOS 细胞中快速、有效地降解。此外,新设计的 MELK 降解剂还能诱导癌细胞发生明显的细胞周期停滞和凋亡。值得注意的是,与 MELK 抑制剂相比,MGP-39 具有更好的抗癌活性和更低的毒性,这表明 PROTACs 在避免传统抑制剂的副作用方面具有实际作用。更重要的是,我们的研究结果表明,使用 PROTAC 可以作为癌症靶向治疗的一种普遍而有效的策略。
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引用次数: 0
Design and synthesis of phosphoryl-substituted steroidal pyridazines (Pho-STPYRs) as potent estrogen receptor alpha inhibitors: targeted treatment of hormone-dependent breast cancer cells† 设计和合成磷酸基取代的甾体哒嗪(Pho-STPYRs)作为强效雌激素受体α抑制剂:靶向治疗激素依赖性乳腺癌细胞
IF 4.1 4区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-03 DOI: 10.1039/D4MD00153B
Yulia Volkova, Alexander Scherbakov, Yaraslau Dzichenka, Alexander Komkov, Fedor Bogdanov, Diana Salnikova, Andrey Dmitrenok, Antos Sachanka, Danila Sorokin and Igor Zavarzin

Estrogen receptor alpha (ERα) is an important target for the discovery of new therapeutic drugs against hormone-dependent breast cancer. A series of phosphoryl-substituted steroidal pyridazines (Pho-STPYRs) were synthesized and biologically evaluated as potent ERα inhibitors. Pho-STPYRs showed cytotoxicity against breast cancer cells with IC50 values of 5.9 μM and higher. Pho-STPYRs 33 and 34 [IC50 (MCF7) = 6.5 and 5.9 μM, respectively] were found to block the expression of ERα, the main driver of breast cancer growth, and modulate the ERK, cyclin D1, and CDK4 pathways. Compound 34 showed selectivity, anti-estrogenic potency and high antiproliferative efficacy in combination with the AKT inhibitor. Molecular docking was used to more accurately define the binding mode of lead compounds 33 and 34 to ERα. The selectivity analysis showed that lead compounds 33 and 34 produce no effects on cytochromes P450, including CYP7A1, CYP7B1, CYP17A1, CYP19A1, and CYP21A2. In a word, Pho-STPYRs 33 and 34 are promising ERα inhibitors for the treatment of hormone-dependent breast cancer.

雌激素受体α(ERα)是发现治疗激素依赖性乳腺癌新药的重要靶点。研究人员合成了一系列磷酰取代的甾体哒嗪(Pho-STPYRs),并对其进行了生物评估,认为它们是有效的ERα抑制剂。Pho-STPYRs 对乳腺癌细胞具有细胞毒性,IC50 值为 5.9 μM 或更高。研究发现,Pho-STPYRs 33 和 34 [IC50 (MCF7) = 6.5 和 5.9 μM]可阻断乳腺癌生长的主要驱动因素 ERα 的表达,并调节 ERK、细胞周期蛋白 D1 和 CDK4 通路。化合物 34 与 AKT 抑制剂联用显示出选择性、抗雌激素效力和高抗增殖效力。利用分子对接技术更准确地确定了先导化合物 33 和 34 与 ERα 的结合模式。选择性分析表明,先导化合物 33 和 34 不会对细胞色素 P450(包括 CYP7A1、CYP7B1、CYP17A1、CYP19A1 和 CYP21A2)产生影响。总之,Pho-STPYRs 33 和 34 是治疗激素依赖性乳腺癌的很有前途的 ERα 抑制剂。
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引用次数: 0
Geometric deep learning-guided Suzuki reaction conditions assessment for applications in medicinal chemistry 几何深度学习引导的铃木反应条件评估在药物化学中的应用
IF 4.1 4区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-05-31 DOI: 10.1039/D4MD00196F
Kenneth Atz, David F. Nippa, Alex T. Müller, Vera Jost, Andrea Anelli, Michael Reutlinger, Christian Kramer, Rainer E. Martin, Uwe Grether, Gisbert Schneider and Georg Wuitschik

Suzuki cross-coupling reactions are considered a valuable tool for constructing carbon–carbon bonds in small molecule drug discovery. However, the synthesis of chemical matter often represents a time-consuming and labour-intensive bottleneck. We demonstrate how machine learning methods trained on high-throughput experimentation (HTE) data can be leveraged to enable fast reaction condition selection for novel coupling partners. We show that the trained models support chemists in determining suitable catalyst-solvent-base combinations for individual transformations including an evaluation of the need for HTE screening. We introduce an algorithm for designing 96-well plates optimized towards reaction yields and discuss the model performance of zero- and few-shot machine learning. The best-performing machine learning model achieved a three-category classification accuracy of 76.3% (±0.2%) and an F1-score for a binary classification of 79.1% (±0.9%). Validation on eight reactions revealed a receiver operating characteristic (ROC) curve (AUC) value of 0.82 (±0.07) for few-shot machine learning. On the other hand, zero-shot machine learning models achieved a mean ROC-AUC value of 0.63 (±0.16). This study positively advocates the application of few-shot machine learning-guided reaction condition selection for HTE campaigns in medicinal chemistry and highlights practical applications as well as challenges associated with zero-shot machine learning.

铃木交叉偶联反应被认为是小分子药物研发中构建碳-碳键的重要工具。然而,化学物质的合成往往是耗时耗力的瓶颈。我们展示了如何利用在高通量实验(HTE)数据上训练的机器学习方法来快速选择新型偶联剂的反应条件。我们的研究表明,训练有素的模型可帮助化学家为单个转化确定合适的催化剂-溶剂-碱组合,包括对高通量实验筛选需求的评估。我们介绍了一种针对反应产率进行优化的 96 孔板设计算法,并讨论了零次和少次机器学习的模型性能。表现最好的机器学习模型的三类分类准确率为 76.3%(±0.2%),二元分类的 F1 分数为 79.1%(±0.9%)。对八个反应的验证显示,少次机器学习的接收操作特征曲线(ROC)值为 0.82(±0.07)。另一方面,零镜头机器学习模型的平均 ROC-AUC 值为 0.63(±0.16)。本研究积极倡导在药物化学的 HTE 活动中应用少次机器学习指导的反应条件选择,并强调了与零次机器学习相关的实际应用和挑战。
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引用次数: 0
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