Pub Date : 2024-01-28DOI: 10.1016/j.sjbs.2024.103940
Bader Alshehri
The geranium genus consists of about 400 species, which have been utilized for a long time in ancient medical practices throughout the world. As a result, herbal medications based on species are commonly utilized to treat a range of illnesses. This investigation aims to provide an extensive assessment of the literature on the phytochemistry, ethnomedicinal and pharmacological importance of the genus Geranium. Data were collected through systemic computer searches among the most reputable scientific databases, Web of Science, Google Scholar, and Scopus. Occasionally, information published as peer-reviewed literature was added to data from sources that these databases do not include. This review includes all published works through the end of 2022. The assessment of the biological characteristics of medicinal plant species in the genus Geranium has received a great deal of attention, primarily in the last 20 years, in tandem with the growing interest in herbal remedies in general. The detailed and systematic comparative analysis presented here provides valuable information on the current Geranium species. It paves the way for other beneficial species of Geranium to be studied in the fields of ethnobotany, phytochemistry, and new drug discovery.
天竺葵属约有 400 个品种,长期以来一直被用于世界各地的古代医疗实践中。因此,以这些物种为基础的草药通常被用来治疗一系列疾病。本次调查旨在对有关天竺葵属植物化学、民族医药学和药理学重要性的文献进行广泛评估。数据是通过在最著名的科学数据库 Web of Science、Google Scholar 和 Scopus 中进行系统的计算机搜索收集的。偶尔也会在这些数据库未包含的数据来源中添加作为同行评审文献发表的信息。本综述包括截至 2022 年底的所有出版作品。对天竺葵属药用植物生物特性的评估受到了广泛关注,这主要是在过去 20 年中,随着人们对草药的兴趣日益浓厚。本文所介绍的详细而系统的比较分析为目前的天竺葵物种提供了宝贵的信息。它为民族植物学、植物化学和新药发现领域研究天竺葵的其他有益物种铺平了道路。
{"title":"The geranium genus: A comprehensive study on ethnomedicinal uses, phytochemical compounds, and pharmacological importance","authors":"Bader Alshehri","doi":"10.1016/j.sjbs.2024.103940","DOIUrl":"10.1016/j.sjbs.2024.103940","url":null,"abstract":"<div><p><em>The geranium</em> genus consists of about 400 species, which have been utilized for a long time in ancient medical practices throughout the world. As a result, herbal medications based on species are commonly utilized to treat a range of illnesses. This investigation aims to provide an extensive assessment of the literature on the phytochemistry, ethnomedicinal and pharmacological importance of the genus <em>Geranium</em>. Data were collected through systemic computer searches among the most reputable scientific databases, Web of Science, Google Scholar, and Scopus. Occasionally, information published as peer-reviewed literature was added to data from sources that these databases do not include. This review includes all published works through the end of 2022. The assessment of the biological characteristics of medicinal plant species in the genus <em>Geranium</em> has received a great deal of attention, primarily in the last 20 years, in tandem with the growing interest in herbal remedies in general.<!--> <!-->The detailed and systematic comparative analysis presented here provides valuable information on the current <em>Geranium</em> species. It paves the way for other beneficial species of <em>Geranium</em> to be studied in the fields of ethnobotany, phytochemistry, and new drug discovery.</p></div>","PeriodicalId":21540,"journal":{"name":"Saudi Journal of Biological Sciences","volume":"31 4","pages":"Article 103940"},"PeriodicalIF":4.4,"publicationDate":"2024-01-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1319562X24000184/pdfft?md5=57e604b9ebe6bb7ca3a85662d5b17b29&pid=1-s2.0-S1319562X24000184-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139588291","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
In the current study the assessment of the antimicrobial and phytochemical properties of Cassia fistula, Musa paradisiaca, Ficus religiosa and Murraya koenigii plants extracts was carried out. The antibacterial potential of these plants extracts was tested against S. aureus and E. coli. The Cassia fistula and Ficus religiosa leaves showed the larger zone of inhibition in aqueous and butanolic extract respectively against Escherichia coli. Musa paradisiaca and Murraya koenigii leaves showed larger zone of inhibition in ethanolic extract against S. aureus. Qualitative phytochemical analysis showed the presence of alkaloids, flavonoids, phenols, terpenoids, steroids, glycosides, saponins, carbohydrates, proteins and tannins in all extracts while phylobatannins, emodins, anthocyanins and leucoanthocyanins were not present in these extracts. Quantitative phytochemical analysis showed the highest alkaloid content in the Murraya koenigii leaves. Highest tannin content and flavonoid content was found in Ficus religiosa leaves, while highest phenolic content was found in case of Cassia fistula. In addition to this antioxidant potential of all the extracts was determined. Musa paradisiaca leaves showed highest antioxidant potential as compared to other plant extracts. In silico analysis of bioactive components present in plant extracts was performed by molecular docking. The rutin and Glu from Musa paradisiaca and Murraya koenigii respectively, were docked with Glycogen Synthase Kinase 3 beta (1GSK-3beta) protein. Quercetin and rutin from Cassia fistula and Ficus religiosa respectively, were docked with C- reactive protein (CRP). The tested bioactive compounds showed good binding affinity with significant number of hydrogen bonds and can be used as a good alternative of synthetic drugs to treat rheumatism and wounds.
在本研究中,对拳果、天堂木、榕树和鹅掌楸植物提取物的抗菌和植物化学特性进行了评估。测试了这些植物提取物对金黄色葡萄球菌和大肠杆菌的抗菌潜力。在水提取物和丁醇提取物中,决明子和榕树叶对大肠杆菌的抑制区分别较大。麝香草和鹅掌楸叶在乙醇提取物中对金黄色葡萄球菌的抑制面积较大。定性植物化学分析显示,所有提取物中都含有生物碱、黄酮类、酚类、萜类、甾体类、苷类、皂苷、碳水化合物、蛋白质和单宁,而植物单宁、大黄素、花青素和白花青素不存在于这些提取物中。定量植物化学分析显示,墨角兰叶中的生物碱含量最高。榕树叶中的单宁和黄酮含量最高,而决明子叶中的酚含量最高。此外,还测定了所有提取物的抗氧化潜力。与其他植物提取物相比,巴西麝香叶的抗氧化潜力最高。通过分子对接对植物提取物中的生物活性成分进行了硅学分析。麝香草和鹅掌楸中的芦丁和甘露分别与糖原合成酶激酶 3 beta(1GSK-3beta)蛋白对接。槲皮素和芦丁分别来自肉桂和薜荔,与 C 反应蛋白(CRP)对接。所测试的生物活性化合物显示出良好的结合亲和力和大量的氢键,可用作治疗风湿病和伤口的合成药物的良好替代品。
{"title":"Phytochemical and antimicrobial properties of different plants and in silico investigation of their bioactive compounds in wound healing and rheumatism","authors":"Roheena Abdullah, Qamar Younas, Afshan Kaleem, Mehwish Iqtedar, Mahwish Aftab, Faiza Saleem","doi":"10.1016/j.sjbs.2024.103942","DOIUrl":"10.1016/j.sjbs.2024.103942","url":null,"abstract":"<div><p>In the current study the assessment of the antimicrobial and phytochemical properties of <em>Cassia fistula, Musa paradisiaca, Ficus religiosa</em> and <em>Murraya koenigii</em> plants extracts was carried out. The antibacterial potential of these plants extracts was tested against <em>S. aureus</em> and <em>E. coli</em>. The <em>Cassia fistula</em> and <em>Ficus religiosa</em> leaves showed the larger zone of inhibition in aqueous and butanolic extract respectively against <em>Escherichia coli. Musa paradisiaca</em> and <em>Murraya koenigii</em> leaves showed larger zone of inhibition in ethanolic extract against <em>S. aureus</em>. Qualitative phytochemical analysis showed the presence of alkaloids, flavonoids, phenols, terpenoids, steroids, glycosides, saponins, carbohydrates, proteins and tannins in all extracts while phylobatannins, emodins, anthocyanins and leucoanthocyanins were not present in these extracts. Quantitative phytochemical analysis showed the highest alkaloid content in the <em>Murraya koenigii</em> leaves. Highest tannin content and flavonoid content was found in <em>Ficus religiosa</em> leaves, while highest phenolic content was found in case of <em>Cassia fistula</em>. In addition to this antioxidant potential of all the extracts was determined. <em>Musa paradisiaca</em> leaves showed highest antioxidant potential as compared to other plant extracts. <em>In silico</em> analysis of bioactive components present in plant extracts was performed by molecular docking. The rutin and Glu from <em>Musa paradisiaca</em> and <em>Murraya koenigii</em> respectively, were docked with Glycogen Synthase Kinase 3 beta (1GSK-3beta) protein. Quercetin and rutin from <em>Cassia fistula</em> and <em>Ficus religiosa</em> respectively, were docked with C- reactive protein (CRP). The tested bioactive compounds showed good binding affinity with significant number of hydrogen bonds and can be used as a good alternative of synthetic drugs to treat rheumatism and wounds.</p></div>","PeriodicalId":21540,"journal":{"name":"Saudi Journal of Biological Sciences","volume":"31 3","pages":"Article 103942"},"PeriodicalIF":4.4,"publicationDate":"2024-01-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1319562X24000202/pdfft?md5=a296bb2765e2158a9e526eb941fa424a&pid=1-s2.0-S1319562X24000202-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139632990","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-01-28DOI: 10.1016/j.sjbs.2024.103944
Adel A. Rezk , Heba I. Mohamed , Hossam S. El-Beltagi
The present study was aimed at evaluating the genetic variation and population structure in a collection of 22 rice genotypes. Twenty-two rice genotypes were assessed using quantitative traits and SSR molecular markers for genetic variability and genetic diversity. As for genetic diversity, the genotypes were clarified based on twelve quantitative traits. Clustering produced two large groups: the IR70423-169-2-2 variety was in a branch alone due to its long duration, while, the second group included all rest of genotypes and was split up into two sub-groups. The first sub-group included IR67418-131-2-3-3-3, IR67420-206-3-1-3-3, Giza181, Giza182, Sakha104, and P1044-86-5-3-3-2M. However, pedigree played in divided clustering with Giza181 and Giza182, which were belonging to the Indica type and produced from the same parents. SSR markers produced 87 alleles, with a mean of 4.3 alleles per locus, which were detected in 22 rice genotypes. A higher number of alleles were found with primers RM262, RM244, RM3843, RM212, and RM3330. With an overall mean of 0.837, the polymorphic information content values were high for all SSR markers, ranging from a low of 0.397 for M254 to a high of 0.837 for RM244. The dendogram was divided into six groups according to the types of genotypes, with the pedigree playing a major role for the genetic distance. In order to help breeders choose parents and create suitable hybrids to achieve genetic improvement in crops, particularly rice, SSR is a useful technique for analysing genotype diversity and aiding in the genetic fingerprinting of each variety.
{"title":"Genetic variability and diversity analysis in Oryza sativa L. genotypes using quantitative traits and SSR markers","authors":"Adel A. Rezk , Heba I. Mohamed , Hossam S. El-Beltagi","doi":"10.1016/j.sjbs.2024.103944","DOIUrl":"10.1016/j.sjbs.2024.103944","url":null,"abstract":"<div><p>The present study was aimed at evaluating the genetic variation and population structure in a collection of 22 rice genotypes. Twenty-two rice genotypes were assessed using quantitative traits and SSR molecular markers for genetic variability and genetic diversity. As for genetic diversity, the genotypes were clarified based on twelve quantitative traits. Clustering produced two large groups: the IR70423-169-2-2 variety was in a branch alone due to its long duration, while, the second group included all rest of genotypes and was split up into two sub-groups. The first sub-group included IR67418-131-2-3-3-3, IR67420-206-3-1-3-3, Giza181, Giza182, Sakha104, and P1044-86-5-3-3-2M. However, pedigree played in divided clustering with Giza181 and Giza182, which were belonging to the Indica type and produced from the same parents. SSR markers produced 87 alleles, with a mean of 4.3 alleles per locus, which were detected in 22 rice genotypes. A higher number of alleles were found with primers RM262, RM244, RM3843, RM212, and RM3330. With an overall mean of 0.837, the polymorphic information content values were high for all SSR markers, ranging from a low of 0.397 for M254 to a high of 0.837 for RM244. The dendogram was divided into six groups according to the types of genotypes, with the pedigree playing a major role for the genetic distance. In order to help breeders choose parents and create suitable hybrids to achieve genetic improvement in crops, particularly rice, SSR is a useful technique for analysing genotype diversity and aiding in the genetic fingerprinting of each variety.</p></div>","PeriodicalId":21540,"journal":{"name":"Saudi Journal of Biological Sciences","volume":"31 3","pages":"Article 103944"},"PeriodicalIF":4.4,"publicationDate":"2024-01-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1319562X24000226/pdfft?md5=7cfe419e3caf07c3e6e7f30fdc5bbc06&pid=1-s2.0-S1319562X24000226-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139588229","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The current research endeavor seeks to unlock the potential of orally administered insulin formulations by utilizing liposomes derived from the fat globule membrane (MFGM) of camel milk as carriers for insulin. This pursuit emerges as a result of the recognized limitations of subcutaneous insulin therapy. The liposomes were meticulously created using the thin film hydration method, followed by comprehensive chemical and morphological analyses. Additionally, comprehensive safety assessments were carried out in vitro and in vivo, revealing significant findings.
The Fourier-transform infrared (FTIR) spectrum confirmed the presence of insulin within the liposomes, demonstrating changes in their size and charge. The in vitro cytotoxicity analysis, performed on HEK-293 cell lines through the MTT assay, yielded results indicating a cell viability of over 90%. In the in vivo investigation, diabetic rats induced by STZ were utilized to evaluate the effects of the liposomes, revealing substantial reductions in blood glucose levels, bilirubin, alkaline phosphatase (ALP), albumin, and alanine aminotransferase (ALT) levels. Hepatic histopathological assessments showed signs of recovery across all treatment groups, with no observable microscopic changes in renal tissue. This investigation highlights the significant hypoglycemic effects observed in insulin-loaded liposomes derived from MFGM obtained from camel milk when administered orally.
{"title":"A novel approach to insulin delivery via oral route: Milk fat globule membrane derived liposomes as a delivery vehicle","authors":"Shaheer Shafiq , Maisa Siddiq Abduh , Fareeha Iqbal , Kousain Kousar , Sadia Anjum , Tahir Ahmad","doi":"10.1016/j.sjbs.2024.103945","DOIUrl":"10.1016/j.sjbs.2024.103945","url":null,"abstract":"<div><p>The current research endeavor seeks to unlock the potential of orally administered insulin formulations by utilizing liposomes derived from the fat globule membrane (MFGM) of camel milk as carriers for insulin. This pursuit emerges as a result of the recognized limitations of subcutaneous insulin therapy. The liposomes were meticulously created using the thin film hydration method, followed by comprehensive chemical and morphological analyses. Additionally, comprehensive safety assessments were carried out <em>in vitro</em> and <em>in vivo</em>, revealing significant findings.</p><p>The Fourier-transform infrared (FTIR) spectrum confirmed the presence of insulin within the liposomes, demonstrating changes in their size and charge. The <em>in vitro</em> cytotoxicity analysis, performed on HEK-293 cell lines through the MTT assay, yielded results indicating a cell viability of over 90%. In the <em>in vivo</em> investigation, diabetic rats induced by STZ were utilized to evaluate the effects of the liposomes, revealing substantial reductions in blood glucose levels, bilirubin, alkaline phosphatase (ALP), albumin, and alanine aminotransferase (ALT) levels. Hepatic histopathological assessments showed signs of recovery across all treatment groups, with no observable microscopic changes in renal tissue. This investigation highlights the significant hypoglycemic effects observed in insulin-loaded liposomes derived from MFGM obtained from camel milk when administered orally.</p></div>","PeriodicalId":21540,"journal":{"name":"Saudi Journal of Biological Sciences","volume":"31 3","pages":"Article 103945"},"PeriodicalIF":4.4,"publicationDate":"2024-01-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1319562X24000238/pdfft?md5=ee03f9a852c5f660c22df3e4dd697882&pid=1-s2.0-S1319562X24000238-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139588295","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-01-26DOI: 10.1016/j.sjbs.2024.103936
Lienda Bashier Eltayeb
In response to growing concerns about the efficacy of antibiotic treatment, there has been a significant increase in research on bacteria that are resistant to antibiotics over the past two centuries. Such investigations might bring a spotlight on the field's evolution and future prospects. The study was aimed at conducting a measurable bibliometric review of the scientific literature on bacterial persistence and dormancy in the 21st Century. A scientific literature published during 21st Century was analyzed to gain insights into and identify research trends and outputs in persistent bacteria. Bibliometrix (R language package) and the VOS viewer were used to conduct a bibliometric investigation to determine the globally indexed persistent bacteria research output. WoS Core Collection databases were searched for persistent bacteria selected as the subject. A total of 1,160 published documents from 495 sources from the preceding two decades were reviewed. Maximum publications of 112 were observed in 2021 with 860 citations; however, 82 publications appeared in 2015 and were able to get the highest number of citations (4,214), only 43 (3.7%) were single-authored, whereas 1,117 (96.3%) publications are the result of collaborative works. Out of the top 10 countries ranked for publications, the USA took the top spot for the most highly productive country with 435 articles. Dormancy’ appeared 2,351 times, followed by ‘Escherichia coli“ (1,744, and ‘Growth’ 1,184 times) in research publications on bacterial persistence research. The findings from this study will aid in the creation of strategies and guidelines for regulating and avoiding bacterial persistence status.
{"title":"Analyzing bacterial persistence and dormancy: A bibliometric exploration of 21st century scientific literature","authors":"Lienda Bashier Eltayeb","doi":"10.1016/j.sjbs.2024.103936","DOIUrl":"10.1016/j.sjbs.2024.103936","url":null,"abstract":"<div><p>In response to growing concerns about the efficacy of antibiotic treatment, there has been a significant increase in research on bacteria that are resistant to antibiotics over the past two centuries. Such investigations might bring a spotlight on the field's evolution and future prospects. The study was aimed at conducting a measurable bibliometric review of the scientific literature on bacterial persistence and dormancy in the 21st Century. A scientific literature published during 21st Century was analyzed to gain insights into and identify research trends and outputs in persistent bacteria. Bibliometrix (R language package) and the VOS viewer were used to conduct a bibliometric investigation to determine the globally indexed persistent bacteria research output. WoS Core Collection databases were searched for persistent bacteria selected as the subject. A total of 1,160 published documents from 495 sources from the preceding two decades were reviewed. Maximum publications of 112 were observed in 2021 with 860 citations; however, 82 publications appeared in 2015 and were able to get the highest number of citations (4,214), only 43 (3.7%) were single-authored, whereas 1,117 (96.3%) publications are the result of collaborative works. Out of the top 10 countries ranked for publications, the USA took the top spot for the most highly productive country with 435 articles. Dormancy’ appeared 2,351 times, followed by ‘<em>Escherichia coli</em>“ (1,744, and ‘Growth’ 1,184 times) in research publications on bacterial persistence research<strong><em>.</em></strong> The findings from this study will aid in the creation of strategies and guidelines for regulating and avoiding bacterial persistence status.</p></div>","PeriodicalId":21540,"journal":{"name":"Saudi Journal of Biological Sciences","volume":"31 3","pages":"Article 103936"},"PeriodicalIF":4.4,"publicationDate":"2024-01-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1319562X24000147/pdfft?md5=bf63a3a074cae78a90e93272084f0a93&pid=1-s2.0-S1319562X24000147-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139588296","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-01-20DOI: 10.1016/j.sjbs.2024.103938
Manishkumar Tamilselvan, Sudhakaran Raja
Shrimp aquaculture has rapidly developed into a significant industry worldwide, providing not only financial gain and high-quality food but also tens of thousands of trained and competent workers. Frequent diseases are now regarded as a significant risk factor for shrimp aquaculture, as they have the potential to significantly reduce shrimp production and result in economic losses. Over the years various traditional methods including the use of antibiotics have been followed to control diseases yet unsuccessful. Probiotic is considered potential supplements for shrimps during farming, they may also act beneficially as disease control and increased production. Probiotics are described as a live microbial supplement that benefits the host by modifying the microbial population associated with the host and its ambient. The present state of research about probiotics demonstrates notable impacts on the immune defences of the host's gastrointestinal system, which play a crucial role in safeguarding against diseases and managing inflammation inside the digestive tract. In the past ten years, many studies on probiotics have been published. However, there is a lack of information about the processes by which probiotics exert their effects in aquaculture systems, with only limited elucidations being offered. This study explores the variety of procedures behind the positive effects of probiotics in shrimp culture. These mechanisms include the augmentation of the immune system, control of growth, antagonistic action against pathogens, competitive exclusion, and modification of the gut microbiota. Mechanisms involved in the probiotic mode of action are mostly interlinked. This provides a greater understanding of the importance of probiotics in shrimp culture as an environmentally friendly practice.
{"title":"Exploring the role and mechanism of potential probiotics in mitigating the shrimp pathogens","authors":"Manishkumar Tamilselvan, Sudhakaran Raja","doi":"10.1016/j.sjbs.2024.103938","DOIUrl":"10.1016/j.sjbs.2024.103938","url":null,"abstract":"<div><p>Shrimp aquaculture has rapidly developed into a significant industry worldwide, providing not only financial gain and high-quality food but also tens of thousands of trained and competent workers. Frequent diseases are now regarded as a significant risk factor for shrimp aquaculture, as they have the potential to significantly reduce shrimp production and result in economic losses. Over the years various traditional methods including the use of antibiotics have been followed to control diseases yet unsuccessful. Probiotic is considered potential supplements for shrimps during farming, they may also act beneficially as disease control and increased production. Probiotics are described as a live microbial supplement that benefits the host by modifying the microbial population associated with the host and its ambient. The present state of research about probiotics demonstrates notable impacts on the immune defences<!--> <!-->of the host's gastrointestinal system, which play a crucial role in safeguarding against diseases and managing inflammation inside the digestive tract. In the past ten years, many studies on probiotics have been published. However, there is a lack of information about the processes by which probiotics exert their effects in aquaculture systems, with only limited elucidations being offered. This study explores the variety of procedures behind the positive effects of probiotics in shrimp culture. These mechanisms include the augmentation of the immune system, control of growth, antagonistic action against pathogens, competitive exclusion, and modification of the gut microbiota. Mechanisms involved in the probiotic mode of action are mostly interlinked. This provides a greater understanding of the importance of probiotics in shrimp culture as an environmentally friendly practice.</p></div>","PeriodicalId":21540,"journal":{"name":"Saudi Journal of Biological Sciences","volume":"31 3","pages":"Article 103938"},"PeriodicalIF":4.4,"publicationDate":"2024-01-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1319562X24000160/pdfft?md5=e4e5e44500c302c24cfd8403e64176f9&pid=1-s2.0-S1319562X24000160-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139507271","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-01-20DOI: 10.1016/j.sjbs.2024.103935
Abdullah Almilaibary
Cancer of the breast is the mainly prevalent class of cancer in females diagnosed over the globe. It also happens to be the 2nd most prevalent reason of cancer-related deaths among females worldwide. Some of the most common type’s therapies for carcinoma of the breast involve radiation therapy, chemotherapy, and resection. Many studies are being conducted to develop new therapeutic strategies for better diagnosis of breast cancer. An enormous number of anticancer medications have been developed as a result of growing understanding of the molecular pathways behind the advancement of cancer. Over the past few decades, the general survival rate has not greatly increased due to the usage of chemically manufactured medications. Therefore, in order to increase the effectiveness of current cancer treatments, new tactics and cutting-edge chemoprevention drugs are required. Phytochemicals, which are naturally occurring molecules derived from plants, are important sources for both cancer therapy and innovative medication development. These phytochemicals frequently work by controlling molecular pathways linked to the development and spread of cancer. Increasing antioxidant status, inactivating carcinogens, preventing proliferation, causing cell cycle arrest and apoptosis, and immune system control are some of the specific ways. This primary objective of this review is to provide an overview of the active ingredients found in natural goods, including information on their pharmacologic action, molecular targets, and current state of knowledge. We have given a thorough description of a number of natural substances that specifically target the pathways linked to breast carcinoma in this study. We've conducted a great deal of study on a few natural compounds that may help us identify novel targets for the detection of breast carcinoma.
{"title":"Phyto-therapeutics as anti-cancer agents in breast cancer: Pathway targeting and mechanistic elucidation","authors":"Abdullah Almilaibary","doi":"10.1016/j.sjbs.2024.103935","DOIUrl":"10.1016/j.sjbs.2024.103935","url":null,"abstract":"<div><p>Cancer of the breast is the mainly prevalent class of cancer in females diagnosed over the globe. It also happens to be the 2nd most prevalent reason of cancer-related deaths among females worldwide. Some of the most common type’s therapies for carcinoma of the breast involve radiation therapy, chemotherapy, and resection. Many studies are being conducted to develop new therapeutic strategies for better diagnosis of breast cancer. An enormous number of anticancer medications have been developed as a result of growing understanding of the molecular pathways behind the advancement of cancer. Over the past few decades, the general survival rate has not greatly increased due to the usage of chemically manufactured medications. Therefore, in order to increase the effectiveness of current cancer treatments, new tactics and cutting-edge chemoprevention drugs are required. Phytochemicals, which are naturally occurring molecules derived from plants, are important sources for both cancer therapy and innovative medication development. These phytochemicals frequently work by controlling molecular pathways linked to the development and spread of cancer. Increasing antioxidant status, inactivating carcinogens, preventing proliferation, causing cell cycle arrest and apoptosis, and immune system control are some of the specific ways. This primary objective of this review is to provide an overview of the active ingredients found in natural goods, including information on their pharmacologic action, molecular targets, and current state of knowledge. We have given a thorough description of a number of natural substances that specifically target the pathways linked to breast carcinoma in this study. We've conducted a great deal of study on a few natural compounds that may help us identify novel targets for the detection of breast carcinoma.</p></div>","PeriodicalId":21540,"journal":{"name":"Saudi Journal of Biological Sciences","volume":"31 3","pages":"Article 103935"},"PeriodicalIF":4.4,"publicationDate":"2024-01-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1319562X24000135/pdfft?md5=d425af42d1b0bc9e40430e5d784813ed&pid=1-s2.0-S1319562X24000135-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139507265","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-01-20DOI: 10.1016/j.sjbs.2024.103937
Ranjitha Dhevi V. Sundar , Sathiavelu Arunachalam
Antimicrobial resistance (AMR) has emerged as one of the most serious worldwide public health issues of the twenty-first century. The expeditious rise of AMR has urged the development of new, natural effective therapeutic strategies against drug-resistant pathogens. Endophytic fungi, which inhabit distinctive environments like endosymbiotic relationships with plants, are gaining interest as alternative reservoirs for novel compounds that exhibit a broad range of chemical diversity and unique modes of action by releasing a variety of secondary metabolites with antimicrobial properties. The objective of the current research was to isolate and identify endophytic fungal species from leaves of Tradescantia pallida and to investigate their antagonistic effects on Multi-Drug-Resistant human pathogens. Endophytic fungus TPL11 and TPL14 showed maximum inhibition in agar plug and agar well diffusion assay. The ethyl acetate crude extract effectively suppressed growth of MRSA (Methicillin-resistant Staphylococcus aureus) ATCC 43300,700699 strains and VRE (Vancomycin-resistant Enterococcus) with the Inhibition zone of 22 ± 0.05, 23 ± 0.11 and 24 ± 0.11 mm respectively with minimum inhibitory concentration (MIC) of 3.125 µg/mL. Whereas TPL11 fungus revealed antibiosis of 22 ± 0.05 and 21 ± 0.15 mm against MRSA(ATCC 43300,700699) and 24 ± 0.05 mm for VRE with MIC of 6.25,3.125 and 1.56 μg/mL respectively. The MIC (Minimum inhibitory concentration) index further confirmed that both the extracts were bacteriostatic against MRSA and bactericidal against VRE. The isolates TPL11 and TPL14 were identified as Fusarium oxysporum and Nigrospora sphaerica by 18S rRNA internal transcribed spacer (ITS) sequencing. To our insight, it is the first report to reveal the presence of F.oxysporum and N.sphaerica in T.pallida and their antibacterial activity.
{"title":"Endophytic fungi of Tradescantia pallida mediated targeting of Multi-Drug resistant human pathogens","authors":"Ranjitha Dhevi V. Sundar , Sathiavelu Arunachalam","doi":"10.1016/j.sjbs.2024.103937","DOIUrl":"10.1016/j.sjbs.2024.103937","url":null,"abstract":"<div><p>Antimicrobial resistance (AMR) has emerged as one of the most serious worldwide public health issues of the twenty-first century. The expeditious rise of AMR has urged the development of new, natural effective therapeutic strategies against drug-resistant pathogens. Endophytic fungi, which inhabit distinctive environments like endosymbiotic relationships with plants, are gaining interest as alternative reservoirs for novel compounds that exhibit a broad range of chemical diversity and unique modes of action by releasing a variety of secondary metabolites with antimicrobial properties. The objective of the current research was to isolate and identify endophytic fungal species from leaves of <em>Tradescantia pallida</em> and to investigate their antagonistic effects on Multi-Drug-Resistant human pathogens. Endophytic fungus TPL11 and TPL14 showed maximum inhibition in agar plug and agar well diffusion assay. The ethyl acetate crude extract effectively suppressed growth of MRSA (Methicillin-resistant <em>Staphylococcus aureus</em>) ATCC 43300,700699 strains and VRE (Vancomycin-resistant <em>Enterococcus</em>) with the Inhibition zone of 22 ± 0.05, 23 ± 0.11 and 24 ± 0.11 mm respectively with minimum inhibitory concentration (MIC) of 3.125 µg/mL. Whereas TPL11 fungus revealed antibiosis of 22 ± 0.05 and 21 ± 0.15 mm against MRSA(ATCC 43300,700699) and 24 ± 0.05 mm for VRE with MIC of 6.25,3.125 and 1.56 μg/mL respectively. The MIC (Minimum inhibitory concentration) index further confirmed that both the extracts were bacteriostatic against MRSA and bactericidal against VRE. The isolates TPL11 and TPL14 were identified as <em>Fusarium oxysporum</em> and <em>Nigrospora sphaerica</em> by 18S rRNA internal transcribed spacer (ITS) sequencing. To our insight, it is the first report to reveal the presence of <em>F.oxysporum</em> and <em>N.sphaerica</em> in <em>T.pallida</em> and their antibacterial activity.</p></div>","PeriodicalId":21540,"journal":{"name":"Saudi Journal of Biological Sciences","volume":"31 3","pages":"Article 103937"},"PeriodicalIF":4.4,"publicationDate":"2024-01-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1319562X24000159/pdfft?md5=a148b375cb4d433f01246aad09abb88c&pid=1-s2.0-S1319562X24000159-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139507130","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-01-14DOI: 10.1016/j.sjbs.2024.103934
Mohammad Zubair
Pneumonia is declared a global emergency public health crisis in children less than five age and the geriatric population. Recent advancements in deep learning models could be utilized effectively for the timely and early diagnosis of pneumonia in immune-compromised patients to avoid complications. This systematic review and meta-analysis utilized PRISMA guidelines for the selection of ten articles included in this study. The literature search was done through electronic databases including PubMed, Scopus, and Google Scholar from 1st January 2016 till 1 July 2023. Overall studies included a total of 126,610 images and 1706 patients in this meta-analysis. At a 95% confidence interval, for pooled sensitivity was 0.90 (0.85–0.94) and I2 statistics 90.20 (88.56 – 91.92). The pooled specificity for deep learning models' diagnostic accuracy was 0.89 (0.86–––0.92) and I2 statistics 92.72 (91.50 – 94.83). I2 statistics showed low heterogeneity across studies highlighting consistent and reliable estimates, and instilling confidence in these findings for researchers and healthcare practitioners. The study highlighted the recent deep learning models single or in combination with high accuracy, sensitivity, and specificity to ensure reliable use for bacterial pneumonia identification and differentiate from other viral, fungal pneumonia in children and adults through chest x-rays and radiographs.
{"title":"Clinical applications of artificial intelligence in identification and management of bacterial infection: Systematic review and meta-analysis","authors":"Mohammad Zubair","doi":"10.1016/j.sjbs.2024.103934","DOIUrl":"10.1016/j.sjbs.2024.103934","url":null,"abstract":"<div><p>Pneumonia is declared a global emergency public health crisis in children less than five age and the geriatric population. Recent advancements in deep learning models could be utilized effectively for the timely and early diagnosis of pneumonia in immune-compromised patients to avoid complications. This systematic review and <em>meta</em>-analysis utilized PRISMA guidelines for the selection of ten articles included in this study. The literature search was done through electronic databases including PubMed, Scopus, and Google Scholar from 1st January 2016 till 1 July 2023. Overall studies included a total of 126,610 images and 1706 patients in this <em>meta</em>-analysis. At a 95% confidence interval, for pooled sensitivity was 0.90 (0.85–0.94) and I2 statistics 90.20 (88.56 – 91.92). The pooled specificity for deep learning models' diagnostic accuracy was 0.89 (0.86–––0.92) and I2 statistics 92.72 (91.50 – 94.83). I2 statistics showed low heterogeneity across studies highlighting consistent and reliable estimates, and instilling confidence in these findings for researchers and healthcare practitioners. The study highlighted the recent deep learning models single or in combination with high accuracy, sensitivity, and specificity to ensure reliable use for bacterial pneumonia identification and differentiate from other viral, fungal pneumonia in children and adults through chest x-rays and radiographs.</p></div>","PeriodicalId":21540,"journal":{"name":"Saudi Journal of Biological Sciences","volume":"31 3","pages":"Article 103934"},"PeriodicalIF":4.4,"publicationDate":"2024-01-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1319562X24000123/pdfft?md5=6bd2c19df3ab270879b92313437183b0&pid=1-s2.0-S1319562X24000123-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139469987","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-01-14DOI: 10.1016/j.sjbs.2024.103933
Muhammad Adnan Shan , Warda Ishtiaq , Shamsa Kanwal , Muhammad Umer Khan , Ayesha Iftikhar , Samiullah Khan
Background
Stress is a pervasive issue in modern life, affecting both physical and mental health. Identifying biomarkers like cell-free DNA (cfDNA) could provide insights into stress response and help detect individuals at risk for stress-related disorders.
Objective
The aim of this study is to investigate the potential use of cfDNA as a diagnostic biomarker in individuals experiencing stress.
Methodology
A case-control analysis was conducted using convenient sampling on university participants (N = 285 cases, N = 500 controls) aged 18–24. The study assessed haematological and lipid profile parameters using the Sysmex XP-300TM automated analyzer and an automated biochemistry analyzer, and cfDNA was extracted using a standardized in house developed Phenol-Chloroform protocol and estimated using Agarose Gel Electrophoresis and Nanodrop. Statistical analysis was performed using SPSS ver. 21.0.
Results
The results indicated a significant difference between stressed individuals and healthy controls in demographic, haematological and biochemical parameters. Specifically, stressed cases had significantly higher levels of cholesterol, LDL cholesterol, triglycerides, glucose, VLDL cholesterol, and lower levels of HDL compared to healthy controls. Stressed cases also showed significantly elevated levels of circulating cfDNA relative to healthy controls.
Conclusion
These findings suggest that cfDNA may have potential as a diagnostic biomarker for stress.
{"title":"Cell-free DNA as a potential diagnostic biomarker in academic stress: A case-control study in young adults","authors":"Muhammad Adnan Shan , Warda Ishtiaq , Shamsa Kanwal , Muhammad Umer Khan , Ayesha Iftikhar , Samiullah Khan","doi":"10.1016/j.sjbs.2024.103933","DOIUrl":"https://doi.org/10.1016/j.sjbs.2024.103933","url":null,"abstract":"<div><h3>Background</h3><p>Stress is a pervasive issue in modern life, affecting both physical and mental health. Identifying biomarkers like cell-free DNA (cfDNA) could provide insights into stress response and help detect individuals at risk for stress-related disorders.</p></div><div><h3>Objective</h3><p>The aim of this study is to investigate the potential use of cfDNA as a diagnostic biomarker in individuals experiencing stress.</p></div><div><h3>Methodology</h3><p>A case-control analysis was conducted using convenient sampling on university participants (N = 285 cases, N = 500 controls) aged 18–24. The study assessed haematological and lipid profile parameters using the Sysmex XP-300TM automated analyzer and an automated biochemistry analyzer, and cfDNA was extracted using a standardized in house developed Phenol-Chloroform protocol and estimated using Agarose Gel Electrophoresis and Nanodrop. Statistical analysis was performed using SPSS ver. 21.0.</p></div><div><h3>Results</h3><p>The results indicated a significant difference between stressed individuals and healthy controls in demographic, haematological and biochemical parameters. Specifically, stressed cases had significantly higher levels of cholesterol, LDL cholesterol, triglycerides, glucose, VLDL cholesterol, and lower levels of HDL compared to healthy controls. Stressed cases also showed significantly elevated levels of circulating cfDNA relative to healthy controls.</p></div><div><h3>Conclusion</h3><p>These findings suggest that cfDNA may have potential as a diagnostic biomarker for stress.</p></div>","PeriodicalId":21540,"journal":{"name":"Saudi Journal of Biological Sciences","volume":"31 3","pages":"Article 103933"},"PeriodicalIF":4.4,"publicationDate":"2024-01-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1319562X24000111/pdfft?md5=41d744090f0b51c64cc021935ccb5ba9&pid=1-s2.0-S1319562X24000111-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139493918","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}