首页 > 最新文献

Sheng wu gong cheng xue bao = Chinese journal of biotechnology最新文献

英文 中文
[Preparation of bacterial outer membrane vesicles modified with anti-angiogenic peptide AP25 on the surface and evaluation of their anti-tumor effects]. [表面抗血管生成肽AP25修饰细菌外膜囊泡的制备及抗肿瘤效果评价]。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2025-12-08 DOI: 10.13345/j.cjb.250702
Shuo Zhao, Huilin Wang, Qing Wang, Xiaorui Li, Weihong Ren

Bacterial outer membrane vesicles (OMVs) have attracted widespread attention in the field of drug delivery due to their excellent biocompatibility, tumor penetration, and loading capacity. The anti-angiogenic peptide AP25 can block malignant tumor angiogenesis and has broad-spectrum anti-cancer activity. To achieve efficient delivery of AP25, we modified AP25 on the surface of OMVs through genetic engineering and explored their inhibitory effects on breast cancer and gastric cancer in vitro. The results indicated that the engineered OMVs had typical morphological characteristics of OMVs, and the particle size distribution conformed to the theoretical. Proteinase K digestion combined with Western blotting confirmed that AP25 was modified on the membrane surface of OMVs. Cell experiments showed that WAP25 OMVs significantly inhibited the proliferation, migration, and invasion of MDA-MB-231 and HGC-27 cells, promoted the cell apoptosis, and downregulated the expression of tumor migration and angiogenesis-related proteins: integrin beta 1 (integrin β1), Homo sapiens inhibitor of DNA binding 1 (ID1), nuclear factor kappa-B (NF-κB), and vascular endothelial growth factor (VEGF). This study achieves effective delivery of protein drugs based on OMVs for the first time, providing new ideas for the anti-angiogenesis therapy for tumors and the functional development of bacterial OMVs.

细菌外膜囊泡(omv)因其优异的生物相容性、穿透性和负载能力在药物传递领域受到广泛关注。抗血管生成肽AP25能阻断恶性肿瘤血管生成,具有广谱抗癌活性。为了实现AP25的高效递送,我们通过基因工程技术将AP25修饰在omv表面,并在体外探索其对乳腺癌和胃癌的抑制作用。结果表明,工程制备的纳米颗粒具有典型的纳米颗粒形态特征,粒径分布符合理论要求。蛋白酶K酶切结合Western blotting证实AP25在omv膜表面被修饰。细胞实验显示,WAP25 omv显著抑制MDA-MB-231和HGC-27细胞的增殖、迁移和侵袭,促进细胞凋亡,下调肿瘤迁移和血管生成相关蛋白:整合素β1 (integrin β1)、DNA结合抑制剂1 (ID1)、核因子κ b (NF-κB)、血管内皮生长因子(VEGF)的表达。本研究首次实现了基于omv的蛋白药物的有效递送,为肿瘤抗血管生成治疗和细菌omv的功能开发提供了新的思路。
{"title":"[Preparation of bacterial outer membrane vesicles modified with anti-angiogenic peptide AP25 on the surface and evaluation of their anti-tumor effects].","authors":"Shuo Zhao, Huilin Wang, Qing Wang, Xiaorui Li, Weihong Ren","doi":"10.13345/j.cjb.250702","DOIUrl":"10.13345/j.cjb.250702","url":null,"abstract":"<p><p>Bacterial outer membrane vesicles (OMVs) have attracted widespread attention in the field of drug delivery due to their excellent biocompatibility, tumor penetration, and loading capacity. The anti-angiogenic peptide AP25 can block malignant tumor angiogenesis and has broad-spectrum anti-cancer activity. To achieve efficient delivery of AP25, we modified AP25 on the surface of OMVs through genetic engineering and explored their inhibitory effects on breast cancer and gastric cancer <i>in vitro</i>. The results indicated that the engineered OMVs had typical morphological characteristics of OMVs, and the particle size distribution conformed to the theoretical. Proteinase K digestion combined with Western blotting confirmed that AP25 was modified on the membrane surface of OMVs. Cell experiments showed that WAP25 OMVs significantly inhibited the proliferation, migration, and invasion of MDA-MB-231 and HGC-27 cells, promoted the cell apoptosis, and downregulated the expression of tumor migration and angiogenesis-related proteins: integrin beta 1 (integrin β1), <i>Homo sapiens</i> inhibitor of DNA binding 1 (ID1), nuclear factor kappa-B (NF-κB), and vascular endothelial growth factor (VEGF). This study achieves effective delivery of protein drugs based on OMVs for the first time, providing new ideas for the anti-angiogenesis therapy for tumors and the functional development of bacterial OMVs.</p>","PeriodicalId":21778,"journal":{"name":"Sheng wu gong cheng xue bao = Chinese journal of biotechnology","volume":"42 2","pages":"797-810"},"PeriodicalIF":0.0,"publicationDate":"2025-12-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147309542","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
[Research progress and future trends of field-effect transistor biosensors in the detection of Staphylococcus aureus]. [场效应晶体管生物传感器在金黄色葡萄球菌检测中的研究进展及未来趋势]。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2025-12-02 DOI: 10.13345/j.cjb.250546
Yanping Hu, Weilin Guo, Hongbin Zhang, Jinyi Yang

Staphylococcus aureus, a common foodborne pathogen, is one of the main causes of bacterial food poisoning. Therefore, developing rapid and highly sensitive detection technologies for this pathogen is of great significance for ensuring food safety and public health. Field-effect transistor (FET) biosensors have become a technical platform with significant development potential in the research on Staphylococcus aureus detection due to their high sensitivity, rapid response, and miniaturization capabilities. This review comprehensively summarizes recent advances in FET biosensors based on silicon nanowires, carbon nanotubes, graphene, molybdenum disulfide, and gold nanoporous structures, with a focus on their breakthroughs in limit of detection, selectivity, and response time. Nowadays, challenges such as fabrication complexity and limited anti-interference capability hinder the practical applications of FET biosensors. Future development requires innovations in nanomaterials, microfluidic integration, and intelligent design to advance their applications in food safety and clinical diagnostics. This study systematically reviews the recent advances in FET biosensors for the detection of Staphylococcus aureus, providing a valuable reference for performance optimization and innovative breakthroughs, and has positive significance for promoting the practical development of food safety monitoring technology.

金黄色葡萄球菌是一种常见的食源性病原体,是引起细菌性食物中毒的主要原因之一。因此,开发快速、高灵敏度的病原菌检测技术对保障食品安全和公众健康具有重要意义。场效应晶体管(FET)生物传感器以其高灵敏度、快速响应和小型化能力成为金黄色葡萄球菌检测研究中具有重要发展潜力的技术平台。本文综述了近年来基于硅纳米线、碳纳米管、石墨烯、二硫化钼和金纳米孔结构的场效应晶体管生物传感器的研究进展,重点介绍了它们在检测极限、选择性和响应时间等方面的突破。目前,FET生物传感器制造复杂、抗干扰能力有限等问题阻碍了其实际应用。未来的发展需要在纳米材料、微流控集成和智能设计方面进行创新,以推进其在食品安全和临床诊断方面的应用。本研究系统综述了用于检测金黄色葡萄球菌的FET生物传感器的最新进展,为性能优化和创新突破提供了有价值的参考,对促进食品安全监测技术的实体化发展具有积极意义。
{"title":"[Research progress and future trends of field-effect transistor biosensors in the detection of <i>Staphylococcus aureus</i>].","authors":"Yanping Hu, Weilin Guo, Hongbin Zhang, Jinyi Yang","doi":"10.13345/j.cjb.250546","DOIUrl":"10.13345/j.cjb.250546","url":null,"abstract":"<p><p><i>Staphylococcus aureus</i>, a common foodborne pathogen, is one of the main causes of bacterial food poisoning. Therefore, developing rapid and highly sensitive detection technologies for this pathogen is of great significance for ensuring food safety and public health. Field-effect transistor (FET) biosensors have become a technical platform with significant development potential in the research on <i>Staphylococcus aureus</i> detection due to their high sensitivity, rapid response, and miniaturization capabilities. This review comprehensively summarizes recent advances in FET biosensors based on silicon nanowires, carbon nanotubes, graphene, molybdenum disulfide, and gold nanoporous structures, with a focus on their breakthroughs in limit of detection, selectivity, and response time. Nowadays, challenges such as fabrication complexity and limited anti-interference capability hinder the practical applications of FET biosensors. Future development requires innovations in nanomaterials, microfluidic integration, and intelligent design to advance their applications in food safety and clinical diagnostics. This study systematically reviews the recent advances in FET biosensors for the detection of <i>Staphylococcus aureus</i>, providing a valuable reference for performance optimization and innovative breakthroughs, and has positive significance for promoting the practical development of food safety monitoring technology.</p>","PeriodicalId":21778,"journal":{"name":"Sheng wu gong cheng xue bao = Chinese journal of biotechnology","volume":"42 2","pages":"713-727"},"PeriodicalIF":0.0,"publicationDate":"2025-12-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147309612","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
[Building on 40 Years, Now Pioneering the Future: Preface to the 40th Anniversary Issue of the Chinese Journal of Biotechnology]. [立足40年,开创未来:《中国生物技术杂志》40周年刊序]。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2025-11-25 DOI: 10.13345/j.cjb.250804
Yin Li

On the 40th anniversary of the Chinese Journal of Biotechnology, this special issue presents 40 articles highlighting advances in synthetic biology, biomanufacturing, health, energy, agriculture and related fields. The preface reflects on the journal's contributions to the discipline and its role in promoting innovation and translation in biotechnology in China.

在《中国生物技术杂志》创刊40周年之际,本期特刊刊载了40篇文章,重点介绍了合成生物学、生物制造、健康、能源、农业及相关领域的研究进展。前言反映了该期刊对该学科的贡献及其在促进中国生物技术创新和转化方面的作用。
{"title":"[Building on 40 Years, Now Pioneering the Future: Preface to the 40th Anniversary Issue of the <i>Chinese Journal of Biotechnology</i>].","authors":"Yin Li","doi":"10.13345/j.cjb.250804","DOIUrl":"10.13345/j.cjb.250804","url":null,"abstract":"<p><p>On the 40th anniversary of the <i>Chinese Journal of Biotechnology</i>, this special issue presents 40 articles highlighting advances in synthetic biology, biomanufacturing, health, energy, agriculture and related fields. The preface reflects on the journal's contributions to the discipline and its role in promoting innovation and translation in biotechnology in China.</p>","PeriodicalId":21778,"journal":{"name":"Sheng wu gong cheng xue bao = Chinese journal of biotechnology","volume":"41 11","pages":"I-VI"},"PeriodicalIF":0.0,"publicationDate":"2025-11-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145850267","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
[DNA modification by sulfur: mechanistic insights drives synthetic biotechnologies forward]. [硫修饰DNA:推动合成生物技术向前发展的机理]。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2025-11-25 DOI: 10.13345/j.cjb.250474
Yuting Shuai, Zhaoxi Han, Xinyi He, Lianrong Wang, Shi Chen, Zixin Deng, Guang Liu

As the genetic material of living organisms, DNA contains diverse chemical modifications beyond the four bases. Since the first discovery of DNA methylation a century ago, over 17 natural DNA modifications have been identified, including 5-methylcytosine (5mC), N6-methyladenosine (6mA), N4-methylcytosine (4mC), and 5-hydroxymethylcytosine (5hmC). These modifications typically do not affect base pairing but may modulate DNA-protein interactions, thereby playing critical roles in physiological processes and disease occurrence. Early studies predominantly focused on base modifications, while the discovery of DNA sulfur modification marked a breakthrough-the first natural modification involving a new element (sulfur) replacing the non-bridging oxygen species in the DNA phosphodiester bond backbone, forming a phosphorothioate (PT) linkage. Recent studies have elucidated the genomic distribution, sequence context, and biological functions of PT modifications. This review highlights the bacterial defense systems associated with PT modifications, their molecular recognition mechanisms, and emerging applications as enabling technologies in gene editing, nucleic acid detection, and bacteriophage-resistant industrial strain development, providing insights for synthetic biology.

DNA作为生物体的遗传物质,除了这四种碱基之外,还包含多种化学修饰。自一个世纪前首次发现DNA甲基化以来,已经确定了超过17种天然DNA修饰,包括5-甲基胞嘧啶(5mC), n6 -甲基腺苷(6mA), n4 -甲基胞嘧啶(4mC)和5-羟甲基胞嘧啶(5hmC)。这些修饰通常不影响碱基配对,但可能调节dna -蛋白质相互作用,从而在生理过程和疾病发生中发挥关键作用。早期的研究主要集中在碱基修饰上,而DNA硫修饰的发现标志着一个突破,这是第一个涉及新元素(硫)取代DNA磷酸二酯键主链中非桥接氧的自然修饰,形成一个磷硫酸(PT)键。最近的研究已经阐明了PT修饰的基因组分布、序列背景和生物学功能。本文综述了与PT修饰相关的细菌防御系统及其分子识别机制,以及在基因编辑、核酸检测和噬菌体抗性工业菌株开发中的新兴应用,为合成生物学提供了新的见解。
{"title":"[DNA modification by sulfur: mechanistic insights drives synthetic biotechnologies forward].","authors":"Yuting Shuai, Zhaoxi Han, Xinyi He, Lianrong Wang, Shi Chen, Zixin Deng, Guang Liu","doi":"10.13345/j.cjb.250474","DOIUrl":"https://doi.org/10.13345/j.cjb.250474","url":null,"abstract":"<p><p>As the genetic material of living organisms, DNA contains diverse chemical modifications beyond the four bases. Since the first discovery of DNA methylation a century ago, over 17 natural DNA modifications have been identified, including 5-methylcytosine (5mC), N6-methyladenosine (6mA), N4-methylcytosine (4mC), and 5-hydroxymethylcytosine (5hmC). These modifications typically do not affect base pairing but may modulate DNA-protein interactions, thereby playing critical roles in physiological processes and disease occurrence. Early studies predominantly focused on base modifications, while the discovery of DNA sulfur modification marked a breakthrough-the first natural modification involving a new element (sulfur) replacing the non-bridging oxygen species in the DNA phosphodiester bond backbone, forming a phosphorothioate (PT) linkage. Recent studies have elucidated the genomic distribution, sequence context, and biological functions of PT modifications. This review highlights the bacterial defense systems associated with PT modifications, their molecular recognition mechanisms, and emerging applications as enabling technologies in gene editing, nucleic acid detection, and bacteriophage-resistant industrial strain development, providing insights for synthetic biology.</p>","PeriodicalId":21778,"journal":{"name":"Sheng wu gong cheng xue bao = Chinese journal of biotechnology","volume":"41 11","pages":"3991-4003"},"PeriodicalIF":0.0,"publicationDate":"2025-11-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145850622","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
[Research progress in avian leukosis virus subgroup J in China]. [中国禽白血病病毒J亚群研究进展]。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2025-11-25 DOI: 10.13345/j.cjb.250525
Yuntong Chen, Wenrui Fan, Yulong Gao

Avian leukosis is a major neoplastic disease caused by avian leukosis viruses (ALVs), which are classified into 11 subgroups (ALV-A to ALV-K). Among them, ALV subgroup J (ALV-J) has undergone significant epidemiological changes since its introduction into China in 1999. It initially transmitted among broilers and then rapidly spread to commercial layer chickens and local chicken breeds. ALV-J infection typically induces myeloid leukosis in chickens and, in some layers, can also lead to hemangiomas. As a retrovirus, ALV-J exhibits high genetic variability. Compared with the prototype strain HPRS-103, the prevalent ALV-J strains in China show notable mutations in the gp85 gene, U3 region, and untranslated region (UTR). The variations in gp85 have led to the emergence of distinct evolutionary clusters of strains derived from layers and local chicken breeds, significantly enhancing viral replication and transmission. Additionally, a 205-nucleotide deletion in UTR and key mutations in the U3 region contribute to increased viral pathogenicity. For disease control, China has adopted an integrated strategy focusing on surveillance and eradication, supported by advanced ALV detection and eradication technologies. This review systematically summarizes the epidemiological evolution, molecular variations, and control measures of ALV-J in China over the past two decades, providing critical insights into its biological characteristics and guiding the development of more effective control strategies.

禽白血病是由禽白血病病毒(alv)引起的一种重要的肿瘤疾病,禽白血病病毒可分为11个亚群(ALV-A ~ ALV-K)。其中,ALV J亚群(ALV-J)自1999年传入中国以来发生了显著的流行病学变化。它最初在肉鸡中传播,然后迅速蔓延到商品蛋鸡和地方鸡品种。ALV-J感染通常在鸡中诱发髓性白血病,在某些蛋鸡中,也可导致血管瘤。作为一种逆转录病毒,ALV-J表现出高度的遗传变异性。与原型株HPRS-103相比,中国流行的ALV-J株在gp85基因、U3区和非翻译区(UTR)存在显著的突变。gp85的变异导致了来自蛋鸡和地方鸡品种的不同进化菌株群的出现,显著增强了病毒的复制和传播。此外,UTR中205个核苷酸的缺失和U3区域的关键突变有助于增加病毒的致病性。在疾病控制方面,中国采取了以监测和根除为重点的综合战略,以先进的ALV检测和根除技术为支撑。本文系统总结了近20年来中国ALV-J的流行病学演变、分子变异和防治措施,为进一步了解其生物学特性和制定更有效的防治策略提供重要依据。
{"title":"[Research progress in avian leukosis virus subgroup J in China].","authors":"Yuntong Chen, Wenrui Fan, Yulong Gao","doi":"10.13345/j.cjb.250525","DOIUrl":"https://doi.org/10.13345/j.cjb.250525","url":null,"abstract":"<p><p>Avian leukosis is a major neoplastic disease caused by avian leukosis viruses (ALVs), which are classified into 11 subgroups (ALV-A to ALV-K). Among them, ALV subgroup J (ALV-J) has undergone significant epidemiological changes since its introduction into China in 1999. It initially transmitted among broilers and then rapidly spread to commercial layer chickens and local chicken breeds. ALV-J infection typically induces myeloid leukosis in chickens and, in some layers, can also lead to hemangiomas. As a retrovirus, ALV-J exhibits high genetic variability. Compared with the prototype strain HPRS-103, the prevalent ALV-J strains in China show notable mutations in the <i>gp85</i> gene, U3 region, and untranslated region (UTR). The variations in gp85 have led to the emergence of distinct evolutionary clusters of strains derived from layers and local chicken breeds, significantly enhancing viral replication and transmission. Additionally, a 205-nucleotide deletion in UTR and key mutations in the U3 region contribute to increased viral pathogenicity. For disease control, China has adopted an integrated strategy focusing on surveillance and eradication, supported by advanced ALV detection and eradication technologies. This review systematically summarizes the epidemiological evolution, molecular variations, and control measures of ALV-J in China over the past two decades, providing critical insights into its biological characteristics and guiding the development of more effective control strategies.</p>","PeriodicalId":21778,"journal":{"name":"Sheng wu gong cheng xue bao = Chinese journal of biotechnology","volume":"41 11","pages":"4467-4473"},"PeriodicalIF":0.0,"publicationDate":"2025-11-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145850736","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
[Yeast biotechnology and green biomanufacturing: current status and future prospects]. 酵母生物技术与绿色生物制造:现状与展望
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2025-11-25 DOI: 10.13345/j.cjb.250747
Cheng Cheng, Mengrui Tao, Weibin Wang, Bei Liao, Yixin Ding, Junxiang Chen, Hui Chen, Kai Li, Xinqing Zhao

Yeasts have a long history of worldwide applications in the production of foods, pharmaceuticals, chemicals, and cosmetics. In recent years, continuous advancements in yeast strain engineering and fermentation technologies, combined with increasing societal emphasis on environmental sustainability and human health, have significantly expanded and deepened the industrial applications of yeast biotechnology. The use of yeasts to produce alternative proteins and cosmetics is emerging as a promising industry trend. Additionally, yeast-based production platforms are increasingly being industrialized for manufacturing biodegradable materials and bioactive compounds with medical and health-promoting properties, highlighting their broad application potential. To ensure a sustainable feedstock supply for yeast biomanufacturing, the use of fermentable sugars derived from renewable biomass, especially the hydrolysate of lignocellulosic renewable biomass, represents a research direction of great significance. This review systematically summarizes the current state of development in yeast-based biotechnology industries and offers a perspective on emerging trends and future prospects for the next generation of yeast-driven industrial processes. This review provides insights into further expanding the industrial applications of yeast, advancing the development of the bioeconomy, and improving the efficiency of green biomanufacturing.

酵母在食品、药品、化学品和化妆品的生产中有着悠久的世界应用历史。近年来,酵母菌种工程和发酵技术的不断进步,加上社会对环境可持续性和人类健康的日益重视,极大地扩展和深化了酵母生物技术的工业应用。利用酵母生产替代蛋白质和化妆品正在成为一个有前途的行业趋势。此外,基于酵母的生产平台越来越多地用于制造具有医疗和健康特性的生物降解材料和生物活性化合物,凸显了其广泛的应用潜力。为了确保酵母生物制造的可持续原料供应,利用可再生生物质,特别是木质纤维素可再生生物质的水解产物,是一个具有重要意义的研究方向。本文系统地总结了目前以酵母为基础的生物技术产业的发展现状,并对下一代酵母驱动的工业过程的新兴趋势和未来前景进行了展望。本文对进一步扩大酵母的工业应用,促进生物经济的发展,提高绿色生物制造的效率具有重要意义。
{"title":"[Yeast biotechnology and green biomanufacturing: current status and future prospects].","authors":"Cheng Cheng, Mengrui Tao, Weibin Wang, Bei Liao, Yixin Ding, Junxiang Chen, Hui Chen, Kai Li, Xinqing Zhao","doi":"10.13345/j.cjb.250747","DOIUrl":"https://doi.org/10.13345/j.cjb.250747","url":null,"abstract":"<p><p>Yeasts have a long history of worldwide applications in the production of foods, pharmaceuticals, chemicals, and cosmetics. In recent years, continuous advancements in yeast strain engineering and fermentation technologies, combined with increasing societal emphasis on environmental sustainability and human health, have significantly expanded and deepened the industrial applications of yeast biotechnology. The use of yeasts to produce alternative proteins and cosmetics is emerging as a promising industry trend. Additionally, yeast-based production platforms are increasingly being industrialized for manufacturing biodegradable materials and bioactive compounds with medical and health-promoting properties, highlighting their broad application potential. To ensure a sustainable feedstock supply for yeast biomanufacturing, the use of fermentable sugars derived from renewable biomass, especially the hydrolysate of lignocellulosic renewable biomass, represents a research direction of great significance. This review systematically summarizes the current state of development in yeast-based biotechnology industries and offers a perspective on emerging trends and future prospects for the next generation of yeast-driven industrial processes. This review provides insights into further expanding the industrial applications of yeast, advancing the development of the bioeconomy, and improving the efficiency of green biomanufacturing.</p>","PeriodicalId":21778,"journal":{"name":"Sheng wu gong cheng xue bao = Chinese journal of biotechnology","volume":"41 11","pages":"4052-4063"},"PeriodicalIF":0.0,"publicationDate":"2025-11-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145850770","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
[Characterization of cbm2813 encoding the cytochrome P450 enzyme in the biosynthetic gene cluster of carbomycin]. [编码卡霉素生物合成基因簇中细胞色素P450酶的cbm2813的表征]。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2025-11-25 DOI: 10.13345/j.cjb.250364
Yue Chang, Shuai Fan, Tianyi Hao, Jianlu Dai, Weiqing He

Carbomycin, a 16-membered macrolide antibiotic produced in Streptomyces thermotolerans, comprises two components, carbomycin A (CA) and carbomycin B (CB). CB is converted into CA through epoxidation of the C12-C13 double bond. The gene cbm2813, located in the biosynthetic gene cluster of carbomycin, encodes a cytochrome P450 enzyme considered to catalyze this epoxidation. In this study, the functional and enzymatic properties of the cytochrome P450 enzyme Cbm2813 in the carbomycin biosynthesis gene cluster were characterized by in vivo gene inactivation and in vitro enzymatic reactions. We employed the CRISPR-Cas9 system to delete cbm2813 and obtained the mutant Δcbm2813. The fermentation products of the mutant contained CB but not CA. Complementation of Δcbm2813 restored CA production. Cbm2813 was successfully expressed in Escherichia coli and then purified. In vitro enzyme assays confirmed that Cbm2813 specifically recognized CB but not structurally similar 16-membered macrolide antibiotics, such as josamycin, midecamycin, and isovalerylspiramycin I. Cbm2813 exhibited the maximal activity at pH 5.5 and 36 ℃, with the catalytic efficiency kcat/Km of 4.39×103 L/(mol·s). Molecular docking suggested that the C9 carbonyl group of CB coordinated with the heme iron in the active site of the enzyme, ensuring strict substrate specificity. This study expands the toolbox of characterized P450 enzymes and advances the understanding of carbomycin biosynthesis.

Carbomycin是一种由耐热链霉菌产生的16元环内酯类抗生素,由Carbomycin a (CA)和Carbomycin B (CB)两种成分组成。CB通过C12-C13双键的环氧化反应转化为CA。cbm2813基因位于卡霉素的生物合成基因簇中,其编码的细胞色素P450酶被认为可以催化这种环氧化反应。本研究通过体内基因失活和体外酶促反应表征了卡霉素生物合成基因簇中细胞色素P450酶Cbm2813的功能和酶学性质。我们使用CRISPR-Cas9系统删除cbm2813,获得突变体Δcbm2813。突变体的发酵产物中含有CB,但不含CA。Δcbm2813的补充恢复了CA的产生。Cbm2813在大肠杆菌中成功表达并纯化。体外酶学实验证实,Cbm2813特异性识别CB,但不识别结构相似的16元大环内酯类抗生素,如乔霉素、米霉素和异戊基螺旋霉素i。Cbm2813在pH 5.5和36℃条件下具有最大活性,催化效率kcat/Km为4.39×103 L/(mol·s)。分子对接表明,CB的C9羰基与酶活性位点的血红素铁配合,确保了严格的底物特异性。这项研究扩大了表征P450酶的工具箱,并推进了对卡霉素生物合成的理解。
{"title":"[Characterization of <i>cbm2813</i> encoding the cytochrome P450 enzyme in the biosynthetic gene cluster of carbomycin].","authors":"Yue Chang, Shuai Fan, Tianyi Hao, Jianlu Dai, Weiqing He","doi":"10.13345/j.cjb.250364","DOIUrl":"https://doi.org/10.13345/j.cjb.250364","url":null,"abstract":"<p><p>Carbomycin, a 16-membered macrolide antibiotic produced in <i>Streptomyces thermotolerans</i>, comprises two components, carbomycin A (CA) and carbomycin B (CB). CB is converted into CA through epoxidation of the C12-C13 double bond. The gene <i>cbm2813</i>, located in the biosynthetic gene cluster of carbomycin, encodes a cytochrome P450 enzyme considered to catalyze this epoxidation. In this study, the functional and enzymatic properties of the cytochrome P450 enzyme Cbm2813 in the carbomycin biosynthesis gene cluster were characterized by <i>in vivo</i> gene inactivation and <i>in vitro</i> enzymatic reactions. We employed the CRISPR-Cas9 system to delete <i>cbm2813</i> and obtained the mutant Δ<i>cbm2813</i>. The fermentation products of the mutant contained CB but not CA. Complementation of Δ<i>cbm2813</i> restored CA production. Cbm2813 was successfully expressed in <i>Escherichia coli</i> and then purified. <i>In vitro</i> enzyme assays confirmed that Cbm2813 specifically recognized CB but not structurally similar 16-membered macrolide antibiotics, such as josamycin, midecamycin, and isovalerylspiramycin I. Cbm2813 exhibited the maximal activity at pH 5.5 and 36 ℃, with the catalytic efficiency <i>k</i><sub>cat</sub>/<i>K</i><sub>m</sub> of 4.39×10<sup>3</sup> L/(mol·s). Molecular docking suggested that the C9 carbonyl group of CB coordinated with the heme iron in the active site of the enzyme, ensuring strict substrate specificity. This study expands the toolbox of characterized P450 enzymes and advances the understanding of carbomycin biosynthesis.</p>","PeriodicalId":21778,"journal":{"name":"Sheng wu gong cheng xue bao = Chinese journal of biotechnology","volume":"41 11","pages":"4125-4137"},"PeriodicalIF":0.0,"publicationDate":"2025-11-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145850528","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
[Mechanisms of foot-and-mouth disease virus replication and host-targeted intervention strategies]. [口蹄疫病毒复制机制及宿主靶向干预策略]。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2025-11-25 DOI: 10.13345/j.cjb.250503
Tingyu Peng, Zixiang Zhu, Haixue Zheng

The research on the interactions between foot-and-mouth disease virus (FMDV) and its host has progressed from pathological analysis to systematic investigations of multi-dimensional and refined interaction networks. This review aims to summarize major advances in this field. First, the studies of viral entry mechanisms have expanded beyond simple receptor-ligand binding models to elucidate the spatiotemporal regulation of multi-receptor collaboration and endocytic pathways. Second, viral strategies, such as metabolic reprogramming and immune evasion, collaboratively hijack host cells to establish an intracellular microenvironment conducive to viral replication. Furthermore, elucidating mechanisms of persistent infection in ruminants and deciphering the regulatory networks of host factors involved in viral replication and assembly have significantly advanced our understanding about the latency and replication cycles of FMDV. These mechanism insights provide a theoretical foundation for developing novel intervention strategies, such as broad-spectrum vaccines, host factor-targeted antiviral agents, and breeding for disease resistance, which hold promise for overcoming the limitations of current control measures. Future research should focus on integrating cutting-edge multidisciplinary technologies to unravel virus-host co-evolution dynamics, facilitate the translation of basic research into clinical and applied outcomes, and ultimately provide new paradigms and strategic support for the effective control of foot-and-mouth disease. The significance of this work lies in its systematic elucidation of the multidimensional mechanisms underlying FMDV-host interactions. This not only deepens our theoretical understanding of viral latency and the replication cycle but also provides a critical foundation for developing novel control strategies, such as broad-spectrum vaccines and targeted antiviral agents, which could potentially overcome prevailing constraints in controlling the disease.

口蹄疫病毒(FMDV)与宿主相互作用的研究已从病理学分析发展到多维度、精细化相互作用网络的系统研究。本文综述了该领域的主要进展。首先,对病毒进入机制的研究已经超越了简单的受体-配体结合模型,以阐明多受体协作和内吞途径的时空调节。其次,病毒策略,如代谢重编程和免疫逃避,协同劫持宿主细胞,建立有利于病毒复制的细胞内微环境。此外,阐明反刍动物持续感染的机制和破译参与病毒复制和组装的宿主因子的调控网络,大大提高了我们对FMDV的潜伏期和复制周期的理解。这些机制见解为开发新的干预策略提供了理论基础,如广谱疫苗、宿主因子靶向抗病毒药物和抗病育种,有望克服当前控制措施的局限性。未来的研究应着眼于整合前沿多学科技术,揭示病毒-宿主协同进化动力学,促进基础研究向临床和应用成果的转化,最终为有效控制口蹄疫提供新的范式和战略支持。这项工作的意义在于它系统地阐明了fmdv -宿主相互作用的多维机制。这不仅加深了我们对病毒潜伏期和复制周期的理论理解,而且为开发新的控制策略(如广谱疫苗和靶向抗病毒药物)提供了关键基础,这些策略可能会克服控制疾病的普遍限制。
{"title":"[Mechanisms of foot-and-mouth disease virus replication and host-targeted intervention strategies].","authors":"Tingyu Peng, Zixiang Zhu, Haixue Zheng","doi":"10.13345/j.cjb.250503","DOIUrl":"https://doi.org/10.13345/j.cjb.250503","url":null,"abstract":"<p><p>The research on the interactions between foot-and-mouth disease virus (FMDV) and its host has progressed from pathological analysis to systematic investigations of multi-dimensional and refined interaction networks. This review aims to summarize major advances in this field. First, the studies of viral entry mechanisms have expanded beyond simple receptor-ligand binding models to elucidate the spatiotemporal regulation of multi-receptor collaboration and endocytic pathways. Second, viral strategies, such as metabolic reprogramming and immune evasion, collaboratively hijack host cells to establish an intracellular microenvironment conducive to viral replication. Furthermore, elucidating mechanisms of persistent infection in ruminants and deciphering the regulatory networks of host factors involved in viral replication and assembly have significantly advanced our understanding about the latency and replication cycles of FMDV. These mechanism insights provide a theoretical foundation for developing novel intervention strategies, such as broad-spectrum vaccines, host factor-targeted antiviral agents, and breeding for disease resistance, which hold promise for overcoming the limitations of current control measures. Future research should focus on integrating cutting-edge multidisciplinary technologies to unravel virus-host co-evolution dynamics, facilitate the translation of basic research into clinical and applied outcomes, and ultimately provide new paradigms and strategic support for the effective control of foot-and-mouth disease. The significance of this work lies in its systematic elucidation of the multidimensional mechanisms underlying FMDV-host interactions. This not only deepens our theoretical understanding of viral latency and the replication cycle but also provides a critical foundation for developing novel control strategies, such as broad-spectrum vaccines and targeted antiviral agents, which could potentially overcome prevailing constraints in controlling the disease.</p>","PeriodicalId":21778,"journal":{"name":"Sheng wu gong cheng xue bao = Chinese journal of biotechnology","volume":"41 11","pages":"4474-4484"},"PeriodicalIF":0.0,"publicationDate":"2025-11-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145850705","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
[Plant synthetic biology technologies and natural product biosynthesis]. 植物合成生物学技术与天然产物生物合成
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2025-11-25 DOI: 10.13345/j.cjb.250445
Cuihuan Zhao, Jie Wu, Jinlong Qiu

Synthetic biology, as a pivotal frontier in 21st-century life sciences, is accelerating the expansion of engineering principles from unicellular microbes to multicellular higher plants. Plant synthetic biology aims to rationally design and reconstruct complex biological functions through the modular assembly of genetic elements, regulatory components, and metabolic pathways. This review outlines the foundational research landscape and major application directions of plant synthetic biology, with a particular focus on recent advances in synthetic promoters and regulatory elements, precision genome editing technologies, and the design of programmable gene circuits. Moreover, we highlight the transformative potential of plant synthetic biology in natural product biosynthesis. In addition to summarizing technological progress, this article critically examines current challenges facing the field and provides perspectives on future development trends of plant synthetic biology.

合成生物学作为21世纪生命科学的关键前沿,正在加速工程原理从单细胞微生物到多细胞高等植物的扩展。植物合成生物学旨在通过基因元件、调控元件和代谢途径的模块化组装,合理设计和重构复杂的生物功能。本文综述了植物合成生物学的基础研究现状和主要应用方向,重点介绍了合成启动子和调控元件、精密基因组编辑技术、可编程基因电路设计等方面的最新进展。此外,我们强调了植物合成生物学在天然产物生物合成中的变革潜力。除了总结技术进步外,本文还批判性地审视了该领域当前面临的挑战,并对植物合成生物学的未来发展趋势进行了展望。
{"title":"[Plant synthetic biology technologies and natural product biosynthesis].","authors":"Cuihuan Zhao, Jie Wu, Jinlong Qiu","doi":"10.13345/j.cjb.250445","DOIUrl":"https://doi.org/10.13345/j.cjb.250445","url":null,"abstract":"<p><p>Synthetic biology, as a pivotal frontier in 21st-century life sciences, is accelerating the expansion of engineering principles from unicellular microbes to multicellular higher plants. Plant synthetic biology aims to rationally design and reconstruct complex biological functions through the modular assembly of genetic elements, regulatory components, and metabolic pathways. This review outlines the foundational research landscape and major application directions of plant synthetic biology, with a particular focus on recent advances in synthetic promoters and regulatory elements, precision genome editing technologies, and the design of programmable gene circuits. Moreover, we highlight the transformative potential of plant synthetic biology in natural product biosynthesis. In addition to summarizing technological progress, this article critically examines current challenges facing the field and provides perspectives on future development trends of plant synthetic biology.</p>","PeriodicalId":21778,"journal":{"name":"Sheng wu gong cheng xue bao = Chinese journal of biotechnology","volume":"41 11","pages":"4064-4075"},"PeriodicalIF":0.0,"publicationDate":"2025-11-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145850757","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
[Research progress in flavonoid apiosides from plants and their biosynthetic pathways]. [植物类黄酮苷及其生物合成途径的研究进展]。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2025-11-25 DOI: 10.13345/j.cjb.250441
Zhen Xu, Jianqiang Kong

Flavonoid apiosides are flavonoid glycosides containing the apiosyl group, with wide distribution in nature. According to the different types of aglycones, flavonoid apiosides can be classified into flavanone apiosides, chalcone apiosides, flavone apiosides, flavonol apiosides, and isoflavone apiosides. Existing research results indicate that flavonoid apiosides exhibit various pharmacological activities such as antioxidation, anti-inflammation, and bone formation-promoting properties, displaying promising medicinal prospects. However, due to the low content of flavonoid apiosides in plants and the cumbersome chemical synthesis steps, there are considerable difficulties in obtaining flavonoid apiosides, which greatly limit the research on their druggability. The discovery of enzymes in the biosynthetic pathways of flavonoid apiosides lays a foundation for the large-scale preparation of flavonoid apiosides through biosynthesis. This article reviews the structural diversity, pharmacological activities, and biosynthesis studies of flavonoid apiosides identified in plants, intending to pave a way for the development and application of flavonoid apiosides.

类黄酮皂苷是含芹菜基的类黄酮苷,在自然界中分布广泛。根据苷元类型的不同,类黄酮苷类可分为黄酮苷类、查尔酮苷类、黄酮苷类、黄酮醇苷类和异黄酮苷类。现有研究结果表明,类黄酮皂苷具有抗氧化、抗炎、促进骨形成等多种药理活性,具有广阔的药用前景。然而,由于植物中类黄酮苷含量低,化学合成步骤繁琐,类黄酮苷的提取难度较大,极大地限制了其药性的研究。类黄酮苷生物合成途径中酶的发现,为大规模生物合成制备类黄酮苷奠定了基础。本文综述了植物中已鉴定的类黄酮苷类化合物的结构多样性、药理活性和生物合成研究,旨在为类黄酮苷类化合物的开发和应用奠定基础。
{"title":"[Research progress in flavonoid apiosides from plants and their biosynthetic pathways].","authors":"Zhen Xu, Jianqiang Kong","doi":"10.13345/j.cjb.250441","DOIUrl":"https://doi.org/10.13345/j.cjb.250441","url":null,"abstract":"<p><p>Flavonoid apiosides are flavonoid glycosides containing the apiosyl group, with wide distribution in nature. According to the different types of aglycones, flavonoid apiosides can be classified into flavanone apiosides, chalcone apiosides, flavone apiosides, flavonol apiosides, and isoflavone apiosides. Existing research results indicate that flavonoid apiosides exhibit various pharmacological activities such as antioxidation, anti-inflammation, and bone formation-promoting properties, displaying promising medicinal prospects. However, due to the low content of flavonoid apiosides in plants and the cumbersome chemical synthesis steps, there are considerable difficulties in obtaining flavonoid apiosides, which greatly limit the research on their druggability. The discovery of enzymes in the biosynthetic pathways of flavonoid apiosides lays a foundation for the large-scale preparation of flavonoid apiosides through biosynthesis. This article reviews the structural diversity, pharmacological activities, and biosynthesis studies of flavonoid apiosides identified in plants, intending to pave a way for the development and application of flavonoid apiosides.</p>","PeriodicalId":21778,"journal":{"name":"Sheng wu gong cheng xue bao = Chinese journal of biotechnology","volume":"41 11","pages":"4138-4156"},"PeriodicalIF":0.0,"publicationDate":"2025-11-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145850775","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Sheng wu gong cheng xue bao = Chinese journal of biotechnology
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1