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Journal of Multiscale Neuroscience 多尺度神经科学杂志
Pub Date : 2023-04-28 DOI: 10.56280/1567939485
Luis H. Favela
Neuroscience has become a big data enterprise. This is due in large part to the rapidly growing quantity and quality of data and increased appreciation of non-neuronal physiology and environments in explaining behavior, cognition, and consciousness. One way neuroscience is dealing with this embarrassment of riches is by appealing to investigative frameworks that put the multiscale nature of neural systems at the forefront. The current work offers one such approach: Nested dynamical modeling, a strategy for creating models of phenomena comprised of multiple spatial and/or temporal scales for purposes of exploration, explanation, and understanding. Building from dynamical systems theory and synergetics, nested dynamical modeling applies a methodological approach aimed at nesting models at one scale of inquiry within models at other scales without compromising biological realism. This strategy is demonstrated via a proof of concept. Some consequences this approach has for the epistemological and theoretical commitments of neuroscience are discussed.
神经科学已经成为一个大数据企业。这在很大程度上是由于数据的数量和质量的快速增长,以及对解释行为、认知和意识的非神经元生理学和环境的日益欣赏。神经科学处理这种财富尴尬的一种方法是诉诸于将神经系统的多尺度特性置于前沿的研究框架。目前的工作提供了一种这样的方法:嵌套动态建模,这是一种创建由多个空间和/或时间尺度组成的现象模型的策略,用于探索、解释和理解。从动态系统理论和协同学出发,嵌套动态建模应用了一种方法论方法,旨在在不影响生物真实性的情况下,在其他尺度的模型中以一个调查尺度嵌套模型。该策略通过概念验证进行了演示。讨论了这种方法对神经科学的认识论和理论承诺的一些后果。
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引用次数: 0
Journal of Multiscale Neuroscience 多尺度神经科学杂志
Pub Date : 2023-04-28 DOI: 10.56280/1566923773
M. Silberstein
There is growing evidence that brain processes involve multiscale overlapping networks and that the mapping between such neural processes and cognitive functions is many-to-many. So, the answer to the question what spatiotemporal scales in the brain are most relevant for cognition, action, experience, etc., is that several inextricably interconnected and integrated scales are relevant. There is also growing evidence that brains and embodied agents (people) are part of “larger” distributed “bio-psycho-social networks.” One cannot fully appreciate what brains do and how they work in isolation from these larger multiscale, multi-level, and multi-faceted “4E” networks (embodied, embedded, extended, and enactive). Nor can one explain human experience, cognition, or action without such an understanding. Establishing these claims is the purpose of this paper. Section 2 will unpack the claim that the brain itself is best viewed as several multiscale, dynamical, multifunctional, coordinated, and fully integrated overlapping networks. Furthermore, such individual brain networks and conscious cognitive agents are embedded in “larger” “4E” dynamical networks. Section 3 argues that the best characterization of such 4E networks is not in terms of mechanistic reduction or modularity, but contextual emergence. Section 4 will draw key connections between contextual emergence and the related work of other philosophers and neuroscientists. Lastly, Section 4 will conclude that conscious cognitive agents are reasonably conceived of as highly non-decomposable “4E” contextually emergent multiscale dynamical systems. In short, people are not brains and brains are not computers.
越来越多的证据表明,大脑过程涉及多尺度重叠网络,并且这种神经过程和认知功能之间的映射是多对多的。所以,对于大脑中哪些时空尺度与认知、行动、经验等最相关的问题,答案是,有几个不可分割地相互联系、相互整合的尺度是相关的。也有越来越多的证据表明,大脑和具体化的代理人(人)是“更大的”分布式“生物-心理-社会网络”的一部分。如果脱离这些更大的、多尺度的、多层次的、多方面的“4E”网络(具体的、嵌入的、扩展的和主动的),我们就不能完全理解大脑在做什么,以及它们是如何工作的。没有这样的理解,也不能解释人类的经验、认知或行为。确立这些主张是本文的目的。第2节将解释大脑本身最好被视为几个多尺度、动态、多功能、协调和完全集成的重叠网络的主张。此外,这样的个体大脑网络和有意识的认知代理被嵌入到“更大的”“4E”动态网络中。第3节认为,这种4E网络的最佳特征不是机械简化或模块化,而是上下文涌现。第4节将绘制上下文涌现与其他哲学家和神经科学家的相关工作之间的关键联系。最后,第4节将得出结论,有意识的认知代理被合理地认为是高度不可分解的“4E”上下文涌现的多尺度动力系统。总之,人不是大脑,大脑也不是电脑。
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引用次数: 0
Temporary disruption in language processing reflected as multiscale temporal discoordination in a recurrent network 语言处理的暂时中断反映为循环网络中的多尺度时间失调
Pub Date : 2023-04-28 DOI: 10.56280/1570699699
Benjamin Nguyen, Michael J. Spivey
By juxtaposing time series analyses of activity measured from a fully recurrent network undergoing disrupted processing and of activity measured from a continuous meta-cognitive report of disruption in real-time language comprehension, we present an opportunity to compare the temporal statistics of the state-space trajectories inherent to both systems. Both the recurrent network and the human language comprehension process appear to exhibit long-range temporal correlations and low entropy when processing is undisrupted and coordinated. However, when processing is disrupted and discoordinated, they both exhibit more short-range temporal correlations and higher entropy. We conclude that by measuring human language comprehension in a dense-sampling manner similar to how we analyze the networks, and analyzing the resulting data stream with nonlinear time series analysis techniques, we can obtain more insight into the temporal character of these discoordination phases than by simply marking the points in time at which they peak.
通过对经历中断处理的完全循环网络测量的活动的时间序列分析和实时语言理解中断的连续元认知报告测量的活动进行并列分析,我们提供了一个比较两个系统固有的状态空间轨迹的时间统计的机会。当处理不受干扰和协调时,循环网络和人类语言理解过程都表现出长期的时间相关性和低熵。然而,当处理被中断和不协调时,它们都表现出更多的短期时间相关性和更高的熵。我们得出的结论是,通过以类似于我们分析网络的密集采样方式测量人类语言理解能力,并使用非线性时间序列分析技术分析结果数据流,我们可以更深入地了解这些不协调阶段的时间特征,而不是简单地标记它们达到峰值的时间点。
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引用次数: 0
Journal of Multiscale Neuroscience 多尺度神经科学杂志
Pub Date : 2023-04-28 DOI: 10.56280/1564010613
T. Nichols, M. Berman, J. Tuszynski
The etiology of Alzheimer's dementia is, at best multifactorial. Before the emergence of cognitive impairment, symptoms such as thinning of the cortex, accumulation of β-amyloid, and decreased hippocampal volume are common. Hence, the accumulation of β-amyloid and hyperphosphorylated tau fibrillary tangles are two pathological hallmarks in Alzheimer's disease brains, but antibody therapy aimed to decrease β-amyloid has been a failure and, in most optimistic opinions, may delay somewhat disease progression. However, 31-38 % of subjects develop cerebral micro-hemorrhages in aducanumab therapy, an antibody to the amyloid beta plaque by Biogen. Genetics such as Apo E3/E3 have demonstrated defects in the blood-brain barrier in early-onset dementia. Late Onset Alzheimer’s Dementia, has implicated microbe cerebral infections and numerous genetic single nucleotide polymorphisms. However, several cellular biological signatures of Alzheimer's disease have been identified, such as synaptic dysfunction, β-amyloid plaques, hyperphosphorylated tau, cofilin-actin rods, and Hirano bodies which are related to the actin cytoskeleton. Cofilin is one of the most affluent and common actin-binding proteins and plays a role in cell motility, migration, shape, and metabolism. They also play an important role in severing actin filament, nucleating, depolymerizing, and bundling activities. This review summarizes the structure of cofilins appearing after ATP interruptions and deficits in mitochondrial and microtubules and their functional and regulating roles, focusing on the synaptic dysfunction, β-amyloid plaques, hyperphosphorylated tau, cofilin-actin rods, and Hirano bodies of Alzheimer's disease. These findings strengthen our hypothesis that Alzheimer’s dementia is characterized by “Quantum Decoherence” resulting from mitochondrial and microtubular deterioration and responding to near-infrared transcranial photobiomodulation to support mitochondrial and microtubule repair, regrowth and neuronal synaptic renormalization.
阿尔茨海默氏痴呆症的病因最多是多因素的。在出现认知障碍之前,皮层变薄、β-淀粉样蛋白积聚和海马体积减小等症状是常见的。因此,β-淀粉样蛋白的积累和过度磷酸化的tau纤维缠结是阿尔茨海默病大脑的两个病理标志,但旨在减少β-淀粉样蛋白的抗体治疗失败了,在大多数乐观的观点中,可能会延迟疾病的进展。然而,31- 38%的受试者在aducanumab治疗中出现脑出血,aducanumab是百健公司的一种淀粉样蛋白斑块抗体。基因如载脂蛋白E3/E3已经证明在早发性痴呆中血脑屏障存在缺陷。晚发性阿尔茨海默氏痴呆症,涉及微生物脑感染和许多遗传单核苷酸多态性。然而,已经确定了阿尔茨海默病的几个细胞生物学特征,如突触功能障碍、β-淀粉样蛋白斑块、过度磷酸化的tau、cofilin-actin棒和与肌动蛋白细胞骨架相关的平野小体。Cofilin是最丰富和最常见的肌动蛋白结合蛋白之一,在细胞运动,迁移,形状和代谢中起作用。它们在切断肌动蛋白丝、成核、解聚和成束活动中也起重要作用。本文综述了线粒体和微管ATP中断和缺陷后出现的cofilin的结构及其功能和调节作用,重点介绍了阿尔茨海默病的突触功能障碍、β-淀粉样蛋白斑块、过度磷酸化的tau、cofilin-actin棒和Hirano小体。这些发现加强了我们的假设,即阿尔茨海默氏痴呆症的特征是由线粒体和微管退化引起的“量子退相干”,并响应近红外经颅光生物调节,以支持线粒体和微管修复、再生和神经元突触的再正常化。
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引用次数: 0
Journal of Multiscale Neuroscience 多尺度神经科学杂志
Pub Date : 2023-04-28 DOI: 10.56280/1565486655
Tadhg Waddington, R. Balasubramaniam
A wide body of research is currently being devoted to investigating the multiscale processes across the brain and body, and the nature of their interactions. The purpose of this paper is to supplement these analyses of brain and body dynamics by providing a comprehensive account of the multiscale organisations also found in music, and ways in which these systems interact. We proceed in identifying scaling laws as a signature for multiscale features of a system and make the methodological choice of distinguishing 1) scale free structure from 2) scale free dynamics. We follow these distinctions in demonstrating how specifically i.) hierarchical temporal structures, ii.) long-range temporal correlations, and iii.) musical information as scale free structures relate to activity in the brain and body at various temporal or spatial scales during music perception and performance. Further, this is paralleled by fixing our focus to a limited choice of scale free dynamics, namely, iv.) resonance and entrainment, v.) power law distributions, and vi.) 1/f scaling. Though the ubiquitous scaling relations across musical activities, performance and music itself touch on the theme of universality, we outline how differing theoretical proposals concerning the relation between brain, body and musical environment arise in such contexts. Using these examples, we identify their overlap and divergence, and propose future directions for inquiry along these lines.
目前有大量的研究致力于研究大脑和身体的多尺度过程,以及它们相互作用的本质。本文的目的是通过对音乐中发现的多尺度组织以及这些系统相互作用的方式进行全面的描述,来补充对大脑和身体动力学的分析。我们继续识别标度律作为系统多尺度特征的标志,并做出区分1)无标度结构和2)无标度动力学的方法选择。我们遵循这些区别来展示如何具体i.)分层时间结构,ii.)远程时间相关性,以及iii.)音乐信息作为无音阶结构在音乐感知和表演过程中与大脑和身体在各种时间或空间尺度上的活动相关。此外,这与将我们的重点固定在有限的无尺度动力学选择上是平行的,即,iv.)共振和卷入,v.)幂律分布,vi.) 1/f缩放。尽管音乐活动、表演和音乐本身无处不在的比例关系涉及普遍性的主题,但我们概述了在这种背景下,关于大脑、身体和音乐环境之间关系的不同理论建议。通过这些例子,我们确定了它们的重叠和分歧,并提出了未来的研究方向。
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引用次数: 0
Journal of Multiscale Neuroscience 多尺度神经科学杂志
Pub Date : 2023-04-28 DOI: 10.56280/1567588756
Benjamin Nguyen, Michael J. Spivey
Welcome to a special issue of Journal of Multiscale Neuroscience focused on The Mind and The Brain: A Multiscale Interpretation of Cognitive Brain Functionality. This special issue contains six articles that come from different disciplinary perspectives and methods that themselves span a range of spatiotemporal scales for analyzing cognition and behavior. At a time when the field of cognitive science is transitioning away from the computer metaphor of the mind and toward complex interactive frameworks (Spivey, 2023), these articles serve as waypoints for how to go about building those new theories. The articles include philosophical reviews of the processes that allow for self-organization to emerge in a multiscale cognitive system (Silberstein, 2023) and how best to model such multiscale processes (Favela, 2023). They include dense-sampling measures of postural movements (Corbin et al., 2023), time series analyses of music perception (Waddington & Balasubramaniam, 2023), and recurrence quantification analysis of spoken sentence comprehension (Nguyen & Spivey, 2023). And it all culminates in a big-picture perspective on how mental activity across any and all life forms may be best understood as emerging from collective action among sub-elements interacting to form self-organized metastable cognitive structures (Falandays et al., 2023).
欢迎来到《多尺度神经科学杂志》的特刊,关注心灵和大脑:认知大脑功能的多尺度解释。本期特刊包含六篇来自不同学科视角和方法的文章,这些文章本身跨越了一系列时空尺度,用于分析认知和行为。当认知科学领域正在从大脑的计算机隐喻过渡到复杂的互动框架时(Spivey, 2023),这些文章可以作为如何构建这些新理论的路标。这些文章包括对允许自组织在多尺度认知系统中出现的过程的哲学回顾(Silberstein, 2023),以及如何最好地模拟这种多尺度过程(Favela, 2023)。它们包括姿势运动的密集采样测量(Corbin et al., 2023),音乐感知的时间序列分析(Waddington & Balasubramaniam, 2023)以及口语句子理解的重复量化分析(Nguyen & Spivey, 2023)。这一切都以一个宏观的视角达到高潮,即任何和所有生命形式的心理活动如何最好地理解为来自子元素之间相互作用的集体行动,形成自组织的亚稳态认知结构(Falandays et al., 2023)。
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引用次数: 0
Journal of Multiscale Neuroscience 多尺度神经科学杂志
Pub Date : 2023-04-28 DOI: 10.56280/1560617630
Roman Poznanski, Eda Alemdar, Cacha Lleuvelyn, Gerry Leisman, Erkki Brandas
This pioneering research on how specific molecules deep inside our brains form a dynamic information holarchy in phase space, linking mind and consciousness, is not only provocative but also revolutionary. Holonomic is a dynamic encapsulation of the holonic view that originates from the word “holon” and designates a holarchical rather than a hierarchical, dynamic brain organization to encompass multiscale effects. The unitary nature of consciousness being interconnected stems from a multiscalar organization of the brain. We aim to give a holonomic modification of the thermodynamic approach to the problem of consciousness using spatiotemporal intermittency. Starting with quasiparticles as the minimalist material composition of the dynamical brain where interferences patterns between incoherent waves of quasiparticles and their quantum-thermal fluctuations constrain the kinetic internal energy of endogenous molecules through informational channels of the negentropically-derived quantum potential. This indicates that brains are not multifractal involving avalanches but are multiscalar, suggesting that unlike the hologram, where the functional interactions occur in the spectral domain, the spatiotemporal binding is multiscalar because of self-referential amplification occurring via long-range correlative information. The associated negentropic entanglement permeates the unification of the functional information architecture across multiple scales. As such, the holonomic brain theory is suitable for active consciousness, proving that consciousness is not fundamental. The holonomic model of the brain’s internal space is nonmetric and nonfractal. It contains a multiscalar informational structure decoded by intermittency spikes in the fluctuations of the negentropically-derived quantum potential. It is therefore, a more realistic approach than the platonic models in phase space.
这项开创性的研究是关于我们大脑深处的特定分子如何在相空间中形成一个动态的信息整体,将思想和意识联系起来,不仅具有挑衅性,而且具有革命性。Holonomic是对holonic观点的动态封装,起源于“holon”这个词,它指的是一个整体的、而不是一个分层的、动态的大脑组织,它包含了多尺度效应。意识相互联系的单一性源于大脑的多标量组织。我们的目标是给出一个完整的修改热力学方法的问题,意识使用时空间歇性。从准粒子作为动态大脑的极简物质组成开始,其中准粒子的非相干波及其量子热涨落之间的干涉模式通过负熵衍生量子势的信息通道约束内源性分子的动能内能。这表明大脑不是涉及雪崩的多重分形,而是多标量的,这表明与全息图不同,功能相互作用发生在光谱域,时空结合是多标量的,因为通过远程相关信息发生的自我参照放大。相关的负熵纠缠渗透到跨多个尺度的功能信息架构的统一中。因此,完整的大脑理论适用于主动意识,证明意识不是基本的。大脑内部空间的完整模型是非度量的和非分形的。它包含一个多标量信息结构,由负熵衍生量子势波动中的间歇性尖峰解码。因此,它是一种比相空间中的柏拉图式模型更现实的方法。
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引用次数: 0
Journal of Multiscale Neuroscience 多尺度神经科学杂志
Pub Date : 2022-10-27 DOI: 10.56280/1545724982
Xiaoxia Wu, Lei Ding, Neng Chen, Lijuan Gao
Patients with the major depressive disorder usually manifest with sleep disturbance. Early morning awakening is more closely related to major depressive disorder than other sleep disturbances. This study aimed to assess the effect of early morning awakening in treating patients with major depressive disorder. The eligible patients were divided into two groups according to whether they woke up at 2-4 a.m: early morning awakening and non-early morning awakening group. All patients were assessed using the Hamilton Depression Scale, Hamilton Anxiety Scale, and Repeatable Battery for the Assessment of Neuropsychological Status scores at baseline and the fourth week. Twenty-one men and 31 women (mean age 25.13 ±10.67 years) were enrolled. There was a significant main effect of early morning awakening in the Hamilton Depression Scale (P = 0.04) and Hamilton Anxiety Scale (P = 0.01) at the fourth week after treatment. But there was no significant difference in cognitive changes between the two groups. In conclusion, a major depressive disorder with early morning awakening may result in statistically and clinically significant delay in recovery.
重性抑郁症患者通常表现为睡眠障碍。与其他睡眠障碍相比,早起与重度抑郁症的关系更为密切。本研究旨在评估早起对重度抑郁症患者的治疗效果。将符合条件的患者根据是否在凌晨2-4点起床分为早醒组和非早醒组。所有患者在基线和第四周使用汉密尔顿抑郁量表、汉密尔顿焦虑量表和可重复电池评估神经心理状态评分进行评估。男性21例,女性31例,平均年龄25.13±10.67岁。治疗后第4周的汉密尔顿抑郁量表(P = 0.04)和汉密尔顿焦虑量表(P = 0.01)中,早起的主效应显著。但两组之间的认知变化没有显著差异。综上所述,重度抑郁症伴早醒可能导致统计学和临床意义上的恢复延迟。
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引用次数: 0
Journal of Multiscale Neuroscience 多尺度神经科学杂志
Pub Date : 2022-06-27 DOI: 10.56280/1532964696
Zhang Sumei
We found a rare case of Kleine-Levin syndrome in an adolescent female with decreased intracranial pressure. The patient developed symptoms of decreased appetite, depression and anhedonia. The clinical symptoms were similar to an affective disorder of depression attack since the patient had periodic symptoms of excessive sleep and gluttony, accompanied by an involuntary special "Crouching phenomenon" involving hip and knee flexion while holding her legs tightly and lying on her knees. She was not considered narcoleptic after polysomnography and multiple sleep latency tests. Finally, a lumbar puncture revealed low intracranial pressure (65mm H2O). Hypotha- lamic orexin-A detected in the cerebrospinal fluid was at the lower normal limit. After symptomatic treatment involving fluid infusion and increasing intracranial perfusion pressure, the patient's periodic symptoms and social functioning improved with reduced instances of the special "Crouching phenomenon."
我们发现了一例罕见的Kleine-Levin综合征在一个青少年女性颅内压下降。患者出现食欲减退、抑郁和快感缺乏的症状。临床症状类似于抑郁症发作的情感性障碍,患者有周期性的过度睡眠和暴食症状,并伴有不自觉的特殊“蹲伏现象”,包括紧抱腿和跪卧时髋和膝关节弯曲。经多导睡眠图和多次睡眠潜伏期试验后,她未被认为是发作性睡症。最后,腰椎穿刺显示低颅内压(65mm H2O)。脑脊液下丘脑-层状食欲素- a呈正常下限值。在对症治疗包括输注液体和增加颅内灌注压后,患者的周期性症状和社会功能得到改善,特殊的“蹲伏现象”减少了。
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引用次数: 0
Geomagnetism came first: Implications for animal translocation and the two-brains hypothesis. 地磁首先出现:对动物易位和双脑假说的影响。
Pub Date : 2022-05-28 DOI: 10.56280/1580132048
G. Goodman, R. Poznanski, L. Cacha, D. Bercovich
The relevance of the Two-Brains Hypothesis for induction between peripheral Schwann cells and their axon hosts and for intra- and trans-cranial bioengineering at the humanrobotics interface is accompanied by particular attention to its significance for a biological wonder: the involvement of geomagnetism in avian directional behavior in migration, homing and navigation. Two sources of magnetism are considered here. The simpler is the polar (compass) direction, long reported as resulting in some birds in a manner unknown from the presence of magnetite (Fe3O4) in the avian ethmoid region. The second is certain chemical reactions that respond to applied magnetic fields. These usually involve radicals, molecules with unpaired electrons that spin in one of two possible states. A radicalpair mechanism, a light-dependent, chemical initiation of magnetic orientation, has been considered responsive to the axial inclination of the field in relation to Earth's field, but not to its polarity. The initiation is by optic but nonvisually responsive cellular absorption of a photon of a specific wavelength. Radical pairs are short-lived and must be correctly aligned in the host receptors for directional sensitivity. The firmest evidence for the radical-pair theory of magneto-reception in birds remains the cryptochromes, the blue-light absorbing flavoproteins, but the receptor molecule has not been identified yet. Subjective thought and consciousness are also unexplained in birds, as in humans and animals. However, the novel, structured dichotomy of the Two-Brains Hypothesis may provide a fresh, biophysical approach to the connection between geomagnetism, life and the evolution of vertebrate translocation without recourse to philosophy or a universe expanding beyond imagination.
双脑假说与外周雪旺细胞及其轴突宿主之间的诱导,以及与人-机器人界面的颅内和跨颅生物工程的相关性,伴随着对其对生物学奇迹的重要性的特别关注:地磁在鸟类迁徙、归巢和导航中的定向行为中的参与。这里考虑了两种磁源。较简单的是极地(指南针)方向,长期以来报道,由于鸟类筛骨区存在磁铁矿(Fe3O4),导致一些鸟类以一种未知的方式存在。第二种是对外加磁场有反应的某些化学反应。这通常涉及到自由基,即带有未配对电子的分子,这些电子以两种可能的状态之一自旋。一个基对机制,一个依赖于光的,化学引发的磁取向,被认为是响应于磁场相对于地球磁场的轴向倾斜,但不响应其极性。起始是由光学而非视觉响应的细胞吸收特定波长的光子引起的。自由基对是短暂的,必须在宿主受体中正确排列以获得方向敏感性。鸟类磁接受的基对理论最有力的证据仍然是隐色素,一种吸收蓝光的黄素蛋白,但受体分子尚未被确定。与人类和动物一样,鸟类的主观思想和意识也无法解释。然而,“双脑假说”这种新颖的、结构化的二分法可能为地磁、生命和脊椎动物易位进化之间的联系提供了一种新的、生物物理学的方法,而无需求助于哲学或超越想象的宇宙。
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引用次数: 0
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Journal of Multiscale Neuroscience
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