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European Society of Toxicologic Pathology-Pathology 2.0 Mass Spectrometry Imaging Special Interest Group: Mass Spectrometry Imaging in Diagnostic and Toxicologic Pathology for Label-Free Detection of Molecules-From Basics to Practical Applications.
IF 1.4 4区 医学 Q3 PATHOLOGY Pub Date : 2025-02-04 DOI: 10.1177/01926233241311269
Enrico Vezzali, Michael Becker, Fernando Romero-Palomo, Marjolein van Heerden, Caroline Chipeaux, Gregory Hamm, Dinesh S Bangari, Thomas Lemarchand, Barbara Lenz, Bogdan Munteanu, Bhanu Singh, Celine Thuilliez, Seong-Wook Yun, Andrew Smith, Rob Vreeken

Mass Spectrometry Imaging (MSI) is a powerful tool to understand molecular pathophysiology and therapeutic and toxicity mechanisms, as well as for patient stratification and precision medicine. MSI, a label-free technique offering detailed spatial information on a large number of molecules in different tissues, encompasses various techniques including Matrix-Assisted Laser Desorption Ionization (MALDI), Desorption Electrospray Ionization (DESI), and Secondary Ion Mass Spectrometry (SIMS) that can be applied in diagnostic and toxicologic pathology. Given the utmost importance of high-quality samples, pathologists play a pivotal role in providing comprehensive pathobiology and histopathology knowledge, as well as information on tissue sampling, orientation, morphology, endogenous biomarkers, and pathogenesis, which are crucial for the correct interpretation of targeted experiments. This article introduces MSI and its fundamentals, and reports on case examples, determining the best suited technology to address research questions. High-level principles and characteristics of the most used modalities for spatial metabolomics, lipidomics and proteomics, sensitivity and specific requirements for sample procurement and preparation are discussed. MSI applications for projects focused on drug metabolism, nonclinical safety assessment, and pharmacokinetics/pharmacodynamics and various diagnostic pathology cases from nonclinical and clinical settings are showcased.

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引用次数: 0
Thank You to Reviewers.
IF 1.4 4区 医学 Q3 PATHOLOGY Pub Date : 2025-01-30 DOI: 10.1177/01926233251315826
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引用次数: 0
Characterizing Antisense Oligonucleotide-Induced Histopathology Findings in Spinal Cord of Mauritius Cynomolgus Monkeys by Molecular Localization Investigation.
IF 1.4 4区 医学 Q3 PATHOLOGY Pub Date : 2025-01-30 DOI: 10.1177/01926233241311277
Valérie Dubost, Kuno Wuersch, Kelley Penraat, Eric Johnson, Anja Wekkeli, Ramprasad Ramakrishna, Aline Piequet, Géeraldine Greiner, Magali Jivkov, Esther Erard, Regine Hansen, Dominique Brees, Andreas Hartmann, Kamal Kumar Balavenkatraman, Jairo Nunes

The safety of a 2'-O-methoxyethyl antisense oligonucleotide (ASO) was investigated in Mauritius cynomolgus monkeys in a 41-week Good Laboratory Practice (GLP) toxicity study after multiple intrathecal (IT) administrations. Histopathological examination revealed ectopic formation of lymphoid follicles in the spinal cord (SC) at the injection site at all doses and the presence of granular material in neurons of the SC in high-dose animals. The granular material was seen in all the segments of the SC, but mainly in the lumbar segment and persisted at the end of the 26-week recovery period, while the lymphoid follicles showed a reversibility trend. Findings associated with repeated IT administration of ASOs have been described in nonhuman primate (NHP) toxicity studies, specifically in the brain, but findings in the SC are rarely reported. In the present study, we report a high incidence of findings in the SC compared to brain, especially in the lumbar segment in proximity to IT injection sites. An extensive panel of immunohistochemistry markers showed that the ectopic lymphoid follicle formation (LFF) had a cellular composition and organization consistent with tertiary lymphoid structure (TLS) without associated axonal damage in the adjacent nervous tissue. In situ hybridization with an miRNA probe complementary to the ASO revealed that the granular material represented a dose-dependent ASO accumulation in the cytoplasm of neurons without inducing cell death or apoptosis. Glial and ependymal cells in the SC also showed dose-dependent accumulation of the ASO preceding detection of granular material by hematoxylin and eosin (H&E). Based on these molecular localization data, the presence of LFF in SC suggests a chronic local immune activation. Considering the absence of neuronal dysfunction or injury and transient clinical signs previously reported with other 2'-MOE ASOs, the presence of TLS and ASO was considered non-adverse.

在一项为期41周的良好实验室规范(GLP)毒性研究中,研究人员对毛里求斯绒猴进行了多次鞘内给药后的2'-O-甲氧基乙基反义寡核苷酸(ASO)安全性研究。组织病理学检查显示,在所有剂量下,注射部位的脊髓(SC)中都有异位淋巴滤泡形成,高剂量动物的脊髓神经元中存在颗粒状物质。颗粒状物质出现在脊髓的所有节段,但主要出现在腰椎节段,并且在26周的恢复期结束时仍然存在,而淋巴滤泡则呈现出可逆性趋势。在非人灵长类动物(NHP)的毒性研究中,已经描述了与反复 IT 给药 ASO 相关的结果,特别是在大脑中,但在 SC 中的结果却鲜有报道。在本研究中,我们报告了与脑部相比,腹腔积液的发病率较高,尤其是在靠近 IT 注射部位的腰部。大量免疫组化标记物显示,异位淋巴滤泡形成(LFF)的细胞组成和组织结构与三级淋巴结构(TLS)一致,但邻近神经组织没有相关的轴突损伤。与ASO互补的miRNA探针原位杂交显示,颗粒状物质是神经元胞质中ASO的剂量依赖性积累,不会诱导细胞死亡或凋亡。在苏木精和伊红(H&E)检测到颗粒状物质之前,SC 中的胶质细胞和上皮细胞也显示出剂量依赖性的 ASO 聚集。根据这些分子定位数据,SC 中 LFF 的存在表明存在慢性局部免疫激活。考虑到没有神经元功能障碍或损伤,以及之前报道的其他 2'-MOE ASO 的短暂临床症状,TLS 和 ASO 的存在被认为是非不良反应。
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引用次数: 0
Scientific and Regulatory Policy Committee Points to Consider: Proposal and Recommendations to Reduce Euthanasia of Control Nonhuman Primates in Nonclinical Toxicity Studies.
IF 1.4 4区 医学 Q3 PATHOLOGY Pub Date : 2025-01-29 DOI: 10.1177/01926233241309905
Magali Guffroy, Tara Arndt, Erio Barale-Thomas, Susan Bolin, Armelle Grevot, Joelle Ibanes, Steven T Laing, Michael W Leach, Mandy Meindel, Xavier Palazzi, Lila Ramaiah, Julie Schwartz, Robert L Johnson

Nonhuman primates (NHPs) have been and remain a highly valuable animal model with an essential role in translational research and pharmaceutical drug development. Based on current regulatory guidelines, the nonclinical safety of novel therapeutics should be evaluated in relevant nonclinical species, which commonly includes NHPs for biotherapeutics. Given the practical and ethical limitations on availability and/or use of NHPs and in line with the widely accepted guiding "3Rs" (replace, reduce, and refine) principles, many approaches have been considered to optimize toxicity study designs to meaningfully reduce the number of NHPs used. Standard general toxicity studies usually include four groups of equal size, including one group of vehicle control animals. Here, we describe an approach to achieve an overall significant reduction in control animal use, while also resolving many of the issues that may limit application of fully virtual control animals. We propose in Good Laboratory Practice (GLP)-compliant toxicity studies to maintain concurrent control group animals for the in-life phase of the studies, but to limit euthanasia to a subset of control animals. The nonterminated control animals can then be returned to the facility colony for reuse in subsequent studies. The proposed study design could lead to a 15% to 20% reduction in NHP usage. The scientific, logistical, and animal welfare considerations associated with such an approach and suggested solutions are discussed in detail.

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引用次数: 0
Applications of Molecular Pathology: An Evolving Approach to Toxicologic Pathology.
IF 1.4 4区 医学 Q3 PATHOLOGY Pub Date : 2025-01-28 DOI: 10.1177/01926233241313371
Ingrid Cornax, Dinesh S Bangari, Vinicius Carreira, Kyathanahalli S Janardhan
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引用次数: 0
Applications of Cell-Based Protein Array Technology to Preclinical Safety Assessment of Biological Products.
IF 1.4 4区 医学 Q3 PATHOLOGY Pub Date : 2025-01-28 DOI: 10.1177/01926233241311259
Axel Vicart, Cam Holland, Kathryn Fraser, Frederic Gervais, Mark Aspinall-O'Dea, Nick Brown, Kirk Siddals, Géraldine Greiner, Vinicius Carreira, Elizabeth Galbreath, Maggie Willer, Saravanan Kaliyaperumal, Charles Wood, Tim MacLachlan, Elizabeth Clark

Off-target evaluation is essential in preclinical safety assessments of novel biotherapeutics, supporting lead molecule selection, endpoint selection in toxicology studies, and regulatory requirements for first-in-human trials. Off-target interaction of a therapeutic antibody and antibody derivatives has been historically assessed via the Tissue Cross-Reactivity (TCR) study, in which the candidate molecule is used as a reagent in immunohistochemistry (IHC) to assess binding of the candidate molecule to a panel of human tissue sections. The TCR approach is limited by the performance of the therapeutic as an IHC reagent, which is often suboptimal to outright infeasible. Furthermore, binding of the therapeutic in IHC conditions typically has poor in vitro to in vivo translation and lacks qualitative data of the identity of putative off-targets limiting the decisional value of the data. More recently, cell-based protein arrays (CBPA) that allow for screening against a large portion of the human membrane proteome and secretome have emerged as a complement, and likely a higher value alternative, to IHC-based off-target assessment. These arrays identify specific protein interactions and may be useful for testing nontraditional antibody-based therapeutic formats that are unsuitable for TCR studies. This article presents an overview of CBPA technologies in the context of TCR and off-target assessment studies. Selected case examples and strategic considerations covering a range of different modalities are presented.

脱靶评估对于新型生物治疗药物的临床前安全性评估至关重要,它支持先导分子的选择、毒理学研究的终点选择以及首次人体试验的监管要求。治疗性抗体和抗体衍生物的脱靶相互作用历来是通过组织交叉反应(TCR)研究来评估的,在该研究中,候选分子被用作免疫组织化学(IHC)试剂,以评估候选分子与一组人体组织切片的结合情况。TCR 方法受限于治疗药物作为 IHC 试剂的性能,通常不够理想,甚至完全不可行。此外,IHC 条件下的疗法结合通常在体外到体内的转化率较低,而且缺乏关于假定非靶点身份的定性数据,从而限制了数据的决策价值。最近,可针对大部分人类膜蛋白质组和分泌组进行筛选的细胞基蛋白质阵列(CBPA)已成为基于 IHC 的非靶点评估的补充,也可能是价值更高的替代方法。这些阵列可识别特定的蛋白质相互作用,并可用于测试不适合 TCR 研究的非传统抗体疗法。本文概述了 TCR 和脱靶评估研究中的 CBPA 技术。文章介绍了涵盖各种不同模式的精选案例和战略考虑因素。
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引用次数: 0
Historical Control Data of Spontaneous Lesions of Laboratory New Zealand White and Dutch Belted Rabbits (Oryctolagus Cuniculus) Used in Toxicity Studies.
IF 1.4 4区 医学 Q3 PATHOLOGY Pub Date : 2025-01-26 DOI: 10.1177/01926233241298567
Davide Corbetta, Kaori Isobe, Romaisa Masood, Petrina Rogerson, Alys Bradley

A retrospective study was performed to determine the incidences of spontaneous findings in control laboratory New Zealand White (NZW) and Dutch Belted (DB) rabbits. Terminal body and organ weights data were also collected. A total of 2170 NZW (526 males/1644 females), 100 DB rabbits (50 animals per sex), aged 4- to 7-month-old were obtained from 158 non-clinical studies evaluated between 2013 and 2022. The NZW rabbits had greater mean terminal body weights than DB strain. Mixed cell infiltration in the lung was the most recorded finding in both strains, followed by pulmonary inflammation/mononuclear cell infiltration. Differentiation between pulmonary "infiltration"/"inflammation" remained challenging as interpretation of guidelines for diagnostic terminology may vary amongst pathologists. Other common findings included mineralization and basophilia of the renal tubules; hepatic/renal mononuclear cell infiltration, all more common in females. Cysts were commonly recorded, with high prevalence in the oviduct, thyroid gland, ovary in NZW strain, while uterine, pituitary gland, and thyroid gland cysts were the most identified in DB rabbits. Neoplasms and infectious etiologies were absent. Most of the animals were sexually mature. To our knowledge, this is the most recent comprehensive study of spontaneous lesions and organ weights in both rabbit strains and should facilitate the differentiation of spontaneous and induced lesions in safety studies.

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引用次数: 0
Integration of Chromogenic RNAscope In Situ Hybridization for Target Validation in Drug Discovery. 整合显色RNAscope原位杂交用于药物发现的靶标验证。
IF 1.4 4区 医学 Q3 PATHOLOGY Pub Date : 2025-01-19 DOI: 10.1177/01926233241311275
Rosanna Win, Wesley Minto, In Kyoung Mah, Kelli Boyd

Characterizing the expression of novel targets in normal and diseased tissues is a fundamental component of a target validation data package. Often these targets are presented to the pathology team for assessment with bulk or single-cell RNAseq data and limited to no spatial tissue expression data. In situ hybridization to detect mRNA (RNAscope) is a valuable tool to (1) identify cells that may express the target protein and to corroborate protein expression during immunohistochemical (IHC) assay development or (2) to use as surrogate for single-cell expression IHC when antibodies are not available. Chromogenic RNAscope in situ hybridization (CISH) can be performed on frozen or formalin-fixed, paraffin-embedded (FFPE) tissues. This CISH workflow starts with RNA qualification of the tissue (to assess RNA integrity) by measuring the expression of housekeeping genes. RNA-qualified tissues then undergo CISH for the target in question, and positive CISH signals are quantified in VisioPharm by a combination of color deconvolution, size gating, and dot density thresholding. This RNA workflow can complement IHC or standalone in target validation for spatial characterization of novel targets.

表征新靶标在正常和病变组织中的表达是靶标验证数据包的基本组成部分。通常,这些靶标被提交给病理小组,用大量或单细胞RNAseq数据进行评估,并且仅限于没有空间组织表达数据。原位杂交检测mRNA (RNAscope)是一种有价值的工具,可以(1)识别可能表达目标蛋白的细胞,并在免疫组织化学(IHC)检测过程中证实蛋白表达,或者(2)在没有抗体时用作单细胞表达IHC的替代品。显色RNAscope原位杂交(CISH)可以在冷冻或福尔马林固定、石蜡包埋(FFPE)组织上进行。这个CISH工作流程从组织的RNA鉴定(评估RNA完整性)开始,通过测量管家基因的表达。然后,rna合格的组织对目标进行CISH,阳性CISH信号在VisioPharm中通过颜色反褶积、大小门控和点密度阈值的组合进行量化。这种RNA工作流程可以补充IHC或单独用于新靶标的空间表征的靶标验证。
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引用次数: 0
Multiplexed siRNA Immunoassay Unveils Spatial and Quantitative Dimensions of siRNA Function, Abundance, and Localization In Vitro and In Vivo. 多重siRNA免疫分析揭示了siRNA在体外和体内功能、丰度和定位的空间和定量维度。
IF 1.4 4区 医学 Q3 PATHOLOGY Pub Date : 2025-01-19 DOI: 10.1177/01926233241311539
Michael Ly, Sandra Diaz-Garcia, Nathaniel Roscoe, Irina Ushach, Zhigang Hong, Monique França, Stephanie Schaffer, Tong-Yuan Yang, Mathieu Marella, Glenn Marsboom, Donna Klein, Tamar R Grossman, Vinicius Carreira, Michael Ollmann

Small interfering RNAs (siRNAs) have been successfully used as therapeutics to silence disease-causing genes when conjugated to ligands or formulated in lipid nanoparticles to target relevant cell types for efficacy while sparing other cells for safety. To support the development of new methods for delivery of siRNA therapeutics, we developed and characterized a panel of antibodies generated against chemically modified nucleotides used in therapeutic siRNA molecules, identifying a monoclonal antibody that detects a broad range of siRNA representing distinct sequences and modification patterns. By integrating this anti-siRNA antibody with additional reagents, we created a multiplex siRNA immunoassay that simultaneously quantifies siRNA uptake, trafficking, and silencing activity. Using immunohistochemistry (IHC), we applied our method on tissues from mice treated with unconjugated, GalNAc-conjugated, or cholesterol-conjugated siRNAs and quantitatively assessed the biodistribution and activity of siRNAs in various organs. In addition, we used high-content imaging (HCI) and applied our multiplex siRNA immunoassay in tissue culture to enable simultaneous quantification of siRNA uptake, activity, and intracellular colocalization with endosome markers. These methods provide a robust platform for testing nucleic acid delivery methods in vitro and in vivo, allowing precise analysis and visualization of the pharmacokinetics and pharmacodynamics of siRNA therapeutics with cellular and subcellular resolution.

小干扰rna (sirna)已被成功地用作沉默致病基因的治疗药物,当其与配体结合或在脂质纳米颗粒中配制时,可靶向相关细胞类型以获得疗效,同时保证其他细胞的安全性。为了支持siRNA治疗药物递送新方法的发展,我们开发并鉴定了一组针对用于治疗siRNA分子的化学修饰核苷酸产生的抗体,鉴定了一种单克隆抗体,该抗体可以检测代表不同序列和修饰模式的广泛siRNA。通过将这种抗siRNA抗体与其他试剂整合,我们创建了一种多重siRNA免疫分析法,可以同时量化siRNA的摄取、运输和沉默活性。使用免疫组织化学(IHC),我们将我们的方法应用于未偶联的、galnac偶联的或胆固醇偶联的sirna处理的小鼠组织,并定量评估了sirna在各器官中的生物分布和活性。此外,我们使用了高含量成像(HCI),并在组织培养中应用了多重siRNA免疫分析,以同时量化siRNA的摄取、活性和内核体标记的细胞内共定位。这些方法为体外和体内检测核酸递送方法提供了一个强大的平台,可以精确分析和可视化siRNA治疗药物的细胞和亚细胞分辨率的药代动力学和药效学。
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引用次数: 0
Myelin Methods: A Mini-Review. 髓磷脂方法:一个小型回顾。
IF 1.4 4区 医学 Q3 PATHOLOGY Pub Date : 2025-01-19 DOI: 10.1177/01926233241309332
Brad Bolon, Amber Moser, Elizabeth Chlipala

Hematoxylin and eosin (H&E) staining is a suitable approach for detecting substantial structural changes in neural tissues but is less sensitive for identifying subtle alterations to subcellular structures and various chemical constituents, including myelin. Neurohistological methods to better evaluate myelin integrity by light microscopy include acidophilic dyes (eg, eriochrome cyanine R, toluidine blue [used with hard plastic sections]); lipoprotein-binding dyes (eg, Luxol fast blue [LFB], Weil's iron hematoxylin); lipid impregnation with metals (eg, Marchi's, which uses osmium tetroxide for en bloc staining before embedding); and immunohistochemical (IHC) methods to highlight various antigens (eg, myelin basic protein [MBP] and peripheral myelin protein 22 [PMP22]). Some IHC methods reveal enhanced marker expression in damaged myelin (eg, matrix metalloproteinase-9 [MMP9], S100). In neuropathology investigations, H&E is the first-tier screening method, whereas myelin stains (often LFB alone or in combination with dyes that highlight other structural elements) are second-tier procedures performed in combination with other neurohistological procedures to examine neuroaxonal injury and/or glial responses. The choice of myelin method depends on such considerations as cost, institutional preference, the procedure (fixation and embedding medium), and the study objective.

苏木精和伊红(H&E)染色是检测神经组织实质性结构变化的合适方法,但对于识别亚细胞结构和各种化学成分(包括髓磷脂)的细微变化不太敏感。通过光学显微镜更好地评估髓磷脂完整性的神经组织学方法包括嗜酸染料(例如,eriochrome cyanine R,甲苯胺蓝[用于硬塑料切片]);脂蛋白结合染料(如Luxol耐晒蓝[LFB]、Weil’s铁苏木精);金属脂质浸渍(例如,Marchi's,在包埋前使用四氧化二锇进行整体染色);和免疫组化(IHC)方法来突出各种抗原(如髓鞘碱性蛋白[MBP]和外周髓鞘蛋白22 [PMP22])。一些免疫组化方法显示受损髓磷脂中标记物表达增强(如基质金属蛋白酶-9 [MMP9], S100)。在神经病理学检查中,H&E是第一级筛查方法,而髓磷脂染色(通常单独使用LFB或与突出其他结构元素的染料联合使用)是与其他神经组织学检查联合进行的第二级检查,以检查神经轴突损伤和/或神经胶质反应。髓磷脂方法的选择取决于成本、机构偏好、程序(固定和嵌入介质)和研究目标等因素。
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引用次数: 0
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Toxicologic Pathology
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