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Opinion on the Importance of Sharing Toxicologic Pathology Data for Educational and/or Scientific Purposes. 关于为教育和/或科学目的共享毒理病理学数据的重要性的意见。
IF 1.4 4区 医学 Q3 PATHOLOGY Pub Date : 2025-02-01 Epub Date: 2024-11-18 DOI: 10.1177/01926233241296122
Eveline de Rijk, Phaedra Cole, Anna-Lena Frisk, Frederic Gervais, Joost Lensen, Barbara Lenz, Lars Mecklenburg, Flavia Pasello Dos Santos, Annette Romeike, Catherine Ross

Sharing pathology data is critical for educational and scientific purposes. Since most pharmaceutical or (agro)chemical companies outsource nonclinical safety assessment studies to contract research organizations (CROs), the pathology data of those studies are not owned by the investigator but is the legal property of the respective company sponsoring the work. Although some companies have installed policies that govern sharing of pathology data, many companies generally do not allow the external use of data by either the CRO-based study pathologist or the sponsor pathologist. Policies for governing the external use of data vary significantly. In this article, we present an overview of the different approaches taken across different companies (CROs, pharmaceutical/chemical companies, or other institutes) for sharing pathology material for educational and/or scientific purposes. The results of a survey and interviews with legal departments of different companies will be presented (anonymously) and discussed. In addition, the importance of sharing pathology data is addressed, as well as the challenges and opportunities this presents. Suggestions will be provided regarding what material should be made available and what will be needed to achieve agreement for this to happen.

共享病理数据对于教育和科学目的至关重要。由于大多数制药或(农)化学公司都将非临床安全性评估研究外包给合同研究组织 (CRO),因此这些研究的病理数据不归研究者所有,而是赞助这项工作的各公司的合法财产。尽管有些公司制定了管理病理数据共享的政策,但许多公司通常不允许基于合同研究组织的研究病理学家或赞助商病理学家将数据用于外部用途。管理外部使用数据的政策差异很大。本文概述了不同公司(CRO、制药/化学公司或其他机构)为教育和/或科研目的共享病理资料所采取的不同方法。我们将介绍(匿名)一项调查的结果,并与不同公司的法律部门进行访谈和讨论。此外,还将讨论共享病理资料的重要性以及由此带来的挑战和机遇。还将就哪些资料应予以提供以及为此达成一致所需的条件提出建议。
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引用次数: 0
Virtual Control Groups in Non-clinical Toxicity Studies: Impacts on Toxicologic Clinical Pathology Data Interpretation. 非临床毒性研究中的虚拟对照组:对毒理学临床病理数据解释的影响。
IF 1.4 4区 医学 Q3 PATHOLOGY Pub Date : 2025-02-01 Epub Date: 2024-11-30 DOI: 10.1177/01926233241300310
Adeyemi O Adedeji, Adi Wasserkrug Naor

One of the emerging concepts on the reduction of animal use in non-clinical studies is the use of virtual control group (VCG) to replace concurrent control group (CCG). The VCG involves the generation of a control data from historical control data to match a specific study design. This review focuses on two recently published proof-of-concept (POC) studies conducted in rats. One major issue that was consistently seen across these POC studies was the non-reproducibility of some quantitative endpoints between the CCG and the VCG, with clinical pathology parameters being the most affected. The inconsistencies observed with the clinical pathology parameters when using VCGs may lead to: (1) misconception about the accuracy and sensitivity of traditional clinical pathology biomarkers and its implications on safety monitoring in the clinic; (2) inability to correctly identify and characterize organ dysfunctions; (3) interference with the weight-of-evidence approach used in identifying hazards in toxicologic clinical pathology and toxicology studies at large; and (4) wrong interpretations and data reproducibility issues. Other alternatives to reduce animal use in toxicology studies are also discussed including blood microsampling for toxicokinetics, scientifically justified use of recovery animals, and appropriate use and continuous investments in new alternative methods.

在非临床研究中减少动物使用的新兴概念之一是使用虚拟对照组(VCG)来代替并发对照组(CCG)。VCG包括从历史对照数据中生成对照数据,以匹配特定的研究设计。本文综述了最近发表的两项在大鼠中进行的概念验证(POC)研究。在这些POC研究中一致发现的一个主要问题是CCG和VCG之间的一些定量终点的不可重复性,其中临床病理参数受到的影响最大。使用vcg时观察到的与临床病理参数的不一致可能导致:(1)对传统临床病理生物标志物的准确性和敏感性及其对临床安全监测的影响的误解;(2)不能正确识别和描述器官功能障碍;(3)干扰用于确定毒理学临床病理学和毒理学研究中危害的证据权重法;(4)错误解释和数据可重复性问题。还讨论了减少毒理学研究中动物使用的其他替代方法,包括用于毒性动力学的血液微采样,科学合理地使用恢复动物,以及适当使用和持续投资新的替代方法。
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引用次数: 0
IHI VICT3R: Developing and Implementing Virtual Control Groups to Reduce Animal Use in Toxicology Research. 开发和实施虚拟控制组以减少毒理学研究中动物的使用。
IF 1.4 4区 医学 Q3 PATHOLOGY Pub Date : 2025-02-01 Epub Date: 2024-12-12 DOI: 10.1177/01926233241303906
Thomas Steger-Hartmann, Ferran Sanz, Frank Bringezu, Inari Soininen

The virtual control group (VCG) concept was originally developed in the IMI2 project eTRANSAFE, using data of control animals which pharmaceutical companies have accrued over decades from animal toxicity studies. This control data could be repurposed to create virtual control animals to reduce or replace concurrent controls in animal studies. Initial work demonstrated the general feasibility of the VCG concept, but implementation requires significant further collaborative efforts. The new Innovative Health Initiative (IHI) project VICT3R aims to address these challenges and to obtain regulatory acceptance for the VCG concept. To achieve these goals, VICT3R will build a database comprising high-quality, standardized, and duly annotated control animal data from past and forthcoming toxicity studies. The VICT3R project will create workflows and computational tools to generate adequate VCGs based on statistical and artificial intelligence (AI) approaches. The validity, reproducibility, and robustness of the resulting VCGs will be assessed by comparing the performance of their use with that of real control groups.

虚拟对照组(VCG)概念最初是在IMI2项目eTRANSAFE中开发的,使用了制药公司几十年来从动物毒性研究中积累的对照动物数据。这些对照数据可以重新用于创建虚拟对照动物,以减少或取代动物研究中的并发对照。最初的工作证明了VCG概念的总体可行性,但实施需要进一步的大量合作努力。新的创新健康倡议(IHI)项目VICT3R旨在应对这些挑战,并获得VCG概念的监管认可。为了实现这些目标,VICT3R将建立一个数据库,包括来自过去和即将进行的毒性研究的高质量、标准化和适当注释的对照动物数据。VICT3R项目将创建工作流程和计算工具,以基于统计和人工智能(AI)方法生成足够的vcg。所得到的vcg的有效性、可重复性和稳健性将通过将其与真实对照组的使用性能进行比较来评估。
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引用次数: 0
Historical Control Background Incidence of Spontaneous Nonneoplastic Lesions of Sprague Dawley Rats in 104-Week Carcinogenicity Studies. 在为期 104 周的致癌性研究中,Sprague Dawley 大鼠自发性非肿瘤性病变的历史控制背景发生率。
IF 1.4 4区 医学 Q3 PATHOLOGY Pub Date : 2025-02-01 Epub Date: 2024-10-29 DOI: 10.1177/01926233241289116
Marie Bockenstedt, Amit Kumar, Victoria Laast, Alok Sharma

Microscopic observation data collected from approximately 1800 male and female Sprague Dawley (SD) control rats used on 104-week carcinogenicity studies performed at North American Labcorp Early Development, Inc, Madison, WI, were retrospectively evaluated for spontaneous nonneoplastic findings. This study provides incidence of the most common spontaneous nonneoplastic microscopic findings in each organ system of SD rats encountered during 104-week carcinogenicity studies. Some of the most common spontaneous background findings were cardiomyopathy; chronic progressive nephropathy; uterine cystic endometrial hyperplasia; prostate inflammation; pulmonary alveolar macrophage infiltrates; hepatocyte vacuolation, bile duct hyperplasia, and basophilic foci in the liver; pancreatic fibrosis; splenic extramedullary hematopoiesis and pigment; decreased lymphocytes and epithelial hyperplasia in the thymus; ventral brain compression; cystic degeneration and hyperplasia of the adrenal cortex; and mammary gland hyperplasia. The most common nonneoplastic findings in male SD rats were chronic progressive nephropathy (80.9%) and rodent progressive cardiomyopathy (73.2%). The most common nonnenoplastic findings in female SD rats were cystic degeneration of the adrenal cortex (64.7%) and ventral compression of the brain due to pituitary neoplasms (62.7%).

在威斯康星州麦迪逊市的北美实验室早期开发公司(North American Labcorp Early Development, Inc)进行的为期 104 周的致癌性研究中,从约 1800 只雌雄 Sprague Dawley (SD) 对照组大鼠身上收集了显微镜观察数据,并对这些数据进行了回顾性评估,以确定是否存在自发性非肿瘤性结果。本研究提供了在 104 周致癌性研究期间 SD 大鼠各器官系统中最常见的自发性非肿瘤性显微镜检查结果的发生率。一些最常见的自发性背景发现包括心肌病、慢性进行性肾病、子宫囊性内膜增生、前列腺炎症、肺泡巨噬细胞浸润、肝细胞空泡化、胆管增生和肝脏嗜碱性病灶;胰腺纤维化;脾髓外造血和色素沉着;淋巴细胞减少和胸腺上皮增生;大脑腹侧受压;肾上腺皮质囊性变性和增生;乳腺增生。雄性 SD 大鼠最常见的非肿瘤性病变是慢性进行性肾病(80.9%)和啮齿动物进行性心肌病(73.2%)。雌性SD大鼠最常见的非肿瘤性病变是肾上腺皮质囊性变性(64.7%)和垂体肿瘤导致的大脑腹侧压迫(62.7%)。
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引用次数: 0
Thank You to Reviewers.
IF 1.4 4区 医学 Q3 PATHOLOGY Pub Date : 2025-01-30 DOI: 10.1177/01926233251315826
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引用次数: 0
Scientific and Regulatory Policy Committee Points to Consider: Proposal and Recommendations to Reduce Euthanasia of Control Nonhuman Primates in Nonclinical Toxicity Studies.
IF 1.4 4区 医学 Q3 PATHOLOGY Pub Date : 2025-01-29 DOI: 10.1177/01926233241309905
Magali Guffroy, Tara Arndt, Erio Barale-Thomas, Susan Bolin, Armelle Grevot, Joelle Ibanes, Steven T Laing, Michael W Leach, Mandy Meindel, Xavier Palazzi, Lila Ramaiah, Julie Schwartz, Robert L Johnson

Nonhuman primates (NHPs) have been and remain a highly valuable animal model with an essential role in translational research and pharmaceutical drug development. Based on current regulatory guidelines, the nonclinical safety of novel therapeutics should be evaluated in relevant nonclinical species, which commonly includes NHPs for biotherapeutics. Given the practical and ethical limitations on availability and/or use of NHPs and in line with the widely accepted guiding "3Rs" (replace, reduce, and refine) principles, many approaches have been considered to optimize toxicity study designs to meaningfully reduce the number of NHPs used. Standard general toxicity studies usually include four groups of equal size, including one group of vehicle control animals. Here, we describe an approach to achieve an overall significant reduction in control animal use, while also resolving many of the issues that may limit application of fully virtual control animals. We propose in Good Laboratory Practice (GLP)-compliant toxicity studies to maintain concurrent control group animals for the in-life phase of the studies, but to limit euthanasia to a subset of control animals. The nonterminated control animals can then be returned to the facility colony for reuse in subsequent studies. The proposed study design could lead to a 15% to 20% reduction in NHP usage. The scientific, logistical, and animal welfare considerations associated with such an approach and suggested solutions are discussed in detail.

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引用次数: 0
Multiplexed siRNA Immunoassay Unveils Spatial and Quantitative Dimensions of siRNA Function, Abundance, and Localization In Vitro and In Vivo. 多重siRNA免疫分析揭示了siRNA在体外和体内功能、丰度和定位的空间和定量维度。
IF 1.4 4区 医学 Q3 PATHOLOGY Pub Date : 2025-01-19 DOI: 10.1177/01926233241311539
Michael Ly, Sandra Diaz-Garcia, Nathaniel Roscoe, Irina Ushach, Zhigang Hong, Monique França, Stephanie Schaffer, Tong-Yuan Yang, Mathieu Marella, Glenn Marsboom, Donna Klein, Tamar R Grossman, Vinicius Carreira, Michael Ollmann

Small interfering RNAs (siRNAs) have been successfully used as therapeutics to silence disease-causing genes when conjugated to ligands or formulated in lipid nanoparticles to target relevant cell types for efficacy while sparing other cells for safety. To support the development of new methods for delivery of siRNA therapeutics, we developed and characterized a panel of antibodies generated against chemically modified nucleotides used in therapeutic siRNA molecules, identifying a monoclonal antibody that detects a broad range of siRNA representing distinct sequences and modification patterns. By integrating this anti-siRNA antibody with additional reagents, we created a multiplex siRNA immunoassay that simultaneously quantifies siRNA uptake, trafficking, and silencing activity. Using immunohistochemistry (IHC), we applied our method on tissues from mice treated with unconjugated, GalNAc-conjugated, or cholesterol-conjugated siRNAs and quantitatively assessed the biodistribution and activity of siRNAs in various organs. In addition, we used high-content imaging (HCI) and applied our multiplex siRNA immunoassay in tissue culture to enable simultaneous quantification of siRNA uptake, activity, and intracellular colocalization with endosome markers. These methods provide a robust platform for testing nucleic acid delivery methods in vitro and in vivo, allowing precise analysis and visualization of the pharmacokinetics and pharmacodynamics of siRNA therapeutics with cellular and subcellular resolution.

小干扰rna (sirna)已被成功地用作沉默致病基因的治疗药物,当其与配体结合或在脂质纳米颗粒中配制时,可靶向相关细胞类型以获得疗效,同时保证其他细胞的安全性。为了支持siRNA治疗药物递送新方法的发展,我们开发并鉴定了一组针对用于治疗siRNA分子的化学修饰核苷酸产生的抗体,鉴定了一种单克隆抗体,该抗体可以检测代表不同序列和修饰模式的广泛siRNA。通过将这种抗siRNA抗体与其他试剂整合,我们创建了一种多重siRNA免疫分析法,可以同时量化siRNA的摄取、运输和沉默活性。使用免疫组织化学(IHC),我们将我们的方法应用于未偶联的、galnac偶联的或胆固醇偶联的sirna处理的小鼠组织,并定量评估了sirna在各器官中的生物分布和活性。此外,我们使用了高含量成像(HCI),并在组织培养中应用了多重siRNA免疫分析,以同时量化siRNA的摄取、活性和内核体标记的细胞内共定位。这些方法为体外和体内检测核酸递送方法提供了一个强大的平台,可以精确分析和可视化siRNA治疗药物的细胞和亚细胞分辨率的药代动力学和药效学。
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引用次数: 0
Myelin Methods: A Mini-Review. 髓磷脂方法:一个小型回顾。
IF 1.4 4区 医学 Q3 PATHOLOGY Pub Date : 2025-01-19 DOI: 10.1177/01926233241309332
Brad Bolon, Amber Moser, Elizabeth Chlipala

Hematoxylin and eosin (H&E) staining is a suitable approach for detecting substantial structural changes in neural tissues but is less sensitive for identifying subtle alterations to subcellular structures and various chemical constituents, including myelin. Neurohistological methods to better evaluate myelin integrity by light microscopy include acidophilic dyes (eg, eriochrome cyanine R, toluidine blue [used with hard plastic sections]); lipoprotein-binding dyes (eg, Luxol fast blue [LFB], Weil's iron hematoxylin); lipid impregnation with metals (eg, Marchi's, which uses osmium tetroxide for en bloc staining before embedding); and immunohistochemical (IHC) methods to highlight various antigens (eg, myelin basic protein [MBP] and peripheral myelin protein 22 [PMP22]). Some IHC methods reveal enhanced marker expression in damaged myelin (eg, matrix metalloproteinase-9 [MMP9], S100). In neuropathology investigations, H&E is the first-tier screening method, whereas myelin stains (often LFB alone or in combination with dyes that highlight other structural elements) are second-tier procedures performed in combination with other neurohistological procedures to examine neuroaxonal injury and/or glial responses. The choice of myelin method depends on such considerations as cost, institutional preference, the procedure (fixation and embedding medium), and the study objective.

苏木精和伊红(H&E)染色是检测神经组织实质性结构变化的合适方法,但对于识别亚细胞结构和各种化学成分(包括髓磷脂)的细微变化不太敏感。通过光学显微镜更好地评估髓磷脂完整性的神经组织学方法包括嗜酸染料(例如,eriochrome cyanine R,甲苯胺蓝[用于硬塑料切片]);脂蛋白结合染料(如Luxol耐晒蓝[LFB]、Weil’s铁苏木精);金属脂质浸渍(例如,Marchi's,在包埋前使用四氧化二锇进行整体染色);和免疫组化(IHC)方法来突出各种抗原(如髓鞘碱性蛋白[MBP]和外周髓鞘蛋白22 [PMP22])。一些免疫组化方法显示受损髓磷脂中标记物表达增强(如基质金属蛋白酶-9 [MMP9], S100)。在神经病理学检查中,H&E是第一级筛查方法,而髓磷脂染色(通常单独使用LFB或与突出其他结构元素的染料联合使用)是与其他神经组织学检查联合进行的第二级检查,以检查神经轴突损伤和/或神经胶质反应。髓磷脂方法的选择取决于成本、机构偏好、程序(固定和嵌入介质)和研究目标等因素。
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引用次数: 0
Development of a Deep Learning Tool to Support the Assessment of Thyroid Follicular Cell Hypertrophy in the Rat. 一种支持大鼠甲状腺滤泡细胞肥大评估的深度学习工具的开发。
IF 1.4 4区 医学 Q3 PATHOLOGY Pub Date : 2025-01-17 DOI: 10.1177/01926233241309328
Stuart W Naylor, Elizabeth F McInnes, James Alibhai, Scott Burgess, James Baily

Thyroid tissue is sensitive to the effects of endocrine disrupting substances, and this represents a significant health concern. Histopathological analysis of tissue sections of the rat thyroid gland remains the gold standard for the evaluation for agrochemical effects on the thyroid. However, there is a high degree of variability in the appearance of the rat thyroid gland, and toxicologic pathologists often struggle to decide on and consistently apply a threshold for recording low-grade thyroid follicular hypertrophy. This research project developed a deep learning image analysis solution that provides a quantitative score based on the morphological measurements of individual follicles that can be integrated into the standard pathology workflow. To achieve this, a U-Net convolutional deep learning neural network was used that not just identifies the various tissue components but also delineates individual follicles. Further steps to process the raw individual follicle data were developed using empirical models optimized to produce thyroid activity scores that were shown to be superior to the mean epithelial area approach when compared with pathologists' scores. These scores can be used for pathologist decision support using appropriate statistical methods to assess the presence or absence of low-grade thyroid hypertrophy at the group level.

甲状腺组织对内分泌干扰物质的影响很敏感,这是一个重大的健康问题。大鼠甲状腺组织切片的组织病理学分析仍然是评估农药对甲状腺影响的金标准。然而,大鼠甲状腺的外观存在高度的可变性,毒理学病理学家经常难以确定并一致应用记录低级别甲状腺滤泡肥大的阈值。该研究项目开发了一种深度学习图像分析解决方案,该解决方案基于单个卵泡的形态测量提供定量评分,可集成到标准病理工作流程中。为了实现这一目标,使用了U-Net卷积深度学习神经网络,该网络不仅可以识别各种组织成分,还可以描绘单个卵泡。进一步处理原始个体卵泡数据的步骤是使用经验模型进行优化,以产生甲状腺活动评分,与病理学家的评分相比,该评分显示优于平均上皮面积法。这些评分可用于病理学家决策支持,使用适当的统计方法来评估在组水平上是否存在低级别甲状腺肥大。
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引用次数: 0
Immunohistochemistry-Free Enhanced Histopathology of the Rat Spleen Using Deep Learning. 基于深度学习的无免疫组织化学增强大鼠脾脏组织病理学研究。
IF 1.4 4区 医学 Q3 PATHOLOGY Pub Date : 2025-01-01 Epub Date: 2024-12-26 DOI: 10.1177/01926233241303907
Shima Mehrvar, Kevin Maisonave, Wayne Buck, Magali Guffroy, Bhupinder Bawa, Lauren Himmel

Enhanced histopathology of the immune system uses a precise, compartment-specific, and semi-quantitative evaluation of lymphoid organs in toxicology studies. The assessment of lymphocyte populations in tissues is subject to sampling variability and limited distinctive cytologic features of lymphocyte subpopulations as seen with hematoxylin and eosin (H&E) staining. Although immunohistochemistry is necessary for definitive characterization of T- and B-cell compartments, routine toxicologic assessments are based solely on H&E slides. Here, a deep learning (DL) model was developed using normal rats to quantify relevant compartments of the spleen, including periarteriolar lymphoid sheaths, follicles, germinal centers, and marginal zones from H&E slides. Slides were scanned, destained, dual labeled with CD3 and CD79a chromogenic immunohistochemistry, and rescanned to generate exact co-registered images that served as the ground truth for training and validation. The DL model identified individual splenic compartments with high accuracy (97.8% Dice similarity coefficient) directly from H&E-stained tissue. The DL model was utilized to study the normal range of lymphoid compartment area and cellularity. Future implementation of our DL model and expanding this approach to other lymphoid tissues have the potential to improve accuracy and precision in enhanced histopathology evaluation of the immune system with concurrent gains in time efficiency for the pathologist.

免疫系统强化组织病理学在毒理学研究中对淋巴器官进行精确的、特定区域的半定量评估。组织中淋巴细胞群的评估受取样变化和淋巴细胞亚群细胞学特征的限制,如苏木精和伊红(H&E)染色。虽然免疫组化是确定 T 细胞和 B 细胞区系特征的必要条件,但常规毒理学评估仅基于 H&E 切片。在此,我们利用正常大鼠开发了一种深度学习(DL)模型,以量化脾脏的相关区段,包括H&E切片中的小动脉周围淋巴鞘、滤泡、生发中心和边缘区。对切片进行扫描、去染色、CD3 和 CD79a 色原免疫组化双重标记并重新扫描,以生成精确的共混图像,作为训练和验证的基本真相。DL 模型能直接从 H&E 染色组织中高精度(97.8% Dice 相似系数)地识别出单个脾脏分区。我们利用 DL 模型研究了淋巴区面积和细胞度的正常范围。未来实施我们的 DL 模型并将这种方法扩展到其他淋巴组织,有可能提高免疫系统组织病理学评估的准确性和精确性,同时提高病理学家的时间效率。
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引用次数: 0
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Toxicologic Pathology
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