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Computational drug repositioning identifies niclosamide and tribromsalan as inhibitors of Mycobacterium tuberculosis and Mycobacterium abscessus 计算药物重新定位确定烟酰胺和三溴沙兰为结核分枝杆菌和脓肿分枝杆菌的抑制剂
IF 3.2 3区 医学 Q3 IMMUNOLOGY Pub Date : 2024-02-27 DOI: 10.1016/j.tube.2024.102500
Jeremy J. Yang , Aaron Goff , David J. Wild , Ying Ding , Ayano Annis , Randy Kerber , Brian Foote , Anurag Passi , Joel L. Duerksen , Shelley London , Ana C. Puhl , Thomas R. Lane , Miriam Braunstein , Simon J. Waddell , Sean Ekins

Tuberculosis (TB) is still a major global health challenge, killing over 1.5 million people each year, and hence, there is a need to identify and develop novel treatments for Mycobacterium tuberculosis (M. tuberculosis). The prevalence of infections caused by nontuberculous mycobacteria (NTM) is also increasing and has overtaken TB cases in the United States and much of the developed world. Mycobacterium abscessus (M. abscessus) is one of the most frequently encountered NTM and is difficult to treat. We describe the use of drug-disease association using a semantic knowledge graph approach combined with machine learning models that has enabled the identification of several molecules for testing anti-mycobacterial activity. We established that niclosamide (M. tuberculosis IC90 2.95 μM; M. abscessus IC90 59.1 μM) and tribromsalan (M. tuberculosis IC90 76.92 μM; M. abscessus IC90 147.4 μM) inhibit M. tuberculosis and M. abscessus in vitro. To investigate the mode of action, we determined the transcriptional response of M. tuberculosis and M. abscessus to both compounds in axenic log phase, demonstrating a broad effect on gene expression that differed from known M. tuberculosis inhibitors. Both compounds elicited transcriptional responses indicative of respiratory pathway stress and the dysregulation of fatty acid metabolism.

结核病(TB)仍然是一项重大的全球健康挑战,每年造成 150 多万人死亡,因此有必要确定和开发治疗结核分枝杆菌(M. tuberculosis)的新型疗法。由非结核分枝杆菌(NTM)引起的感染率也在不断上升,在美国和大部分发达国家已经超过了结核病病例。脓肿分枝杆菌(M. abscessus)是最常见的非结核分枝杆菌之一,而且难以治疗。我们介绍了利用语义知识图谱方法结合机器学习模型进行药物-疾病关联分析的方法,该方法使我们能够识别出几种用于测试抗霉菌活性的分子。我们确定了烟酰胺(结核杆菌 IC90 2.95 μM;脓疽霉菌 IC90 59.1 μM)和三溴沙兰(结核杆菌 IC90 76.92 μM;脓疽霉菌 IC90 147.4 μM)在体外对结核杆菌和脓疽霉菌的抑制作用。为了研究其作用模式,我们测定了轴生对数期结核杆菌和脓肿病菌对这两种化合物的转录反应,结果表明这两种化合物对基因表达有广泛的影响,不同于已知的结核杆菌抑制剂。两种化合物都引起了转录反应,表明呼吸途径压力和脂肪酸代谢失调。
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引用次数: 0
Lysosomal enzymes and the oxygen burst capability of monocyte-derived macrophages in active drug-resistant tuberculosis patients in relation to cell attachment 活动性耐药性结核病患者单核巨噬细胞的溶酶体酶和氧爆发能力与细胞附着的关系
IF 3.2 3区 医学 Q3 IMMUNOLOGY Pub Date : 2024-02-24 DOI: 10.1016/j.tube.2024.102498
Febriana Catur Iswanti , Kurnia Maidarmi Handayani , Ardiana Kusumaningrum , Tomohiko Yamazaki , Diah Handayani , Mohamad Sadikin

Drug resistance to tuberculosis (TB) has become an obstacle in eliminating tuberculosis. The transmission of drug-resistant TB from patients increases the incidence of primary drug-resistant (DR) TB in individuals who are in close contact. Therefore, it is necessary to incorporate an immunological approach into preventive therapy. This study focuses on the activity of lysosomal enzymes, oxygen bursts, and the attachment ability of macrophages among individuals diagnosed with active drug-resistant TB compared with close contacts with latent TB or healthy cases. We measured macrophage oxygen burst ability (Water-soluble tetrazolium salt (WST) test, Nitric Oxide production, and myeloperoxidase activity) and the degradative ability of lysosomes (activity of the β-glucuronidase and acid phosphatase enzymes). Six active DR-TB patients and 18 close-contact cases (8 Latent Tuberculosis Infection (LTBI); 10 healthy) were recruited at Universitas Indonesia Hospital. The macrophage attachment of the LTBI group was higher than in the other groups. NO production, myeloperoxidase activity, β-glucuronidase, and acid phosphatase were higher in the active DR-TB group. A negative correlation was uncovered between phagocytosis and NO production, myeloperoxidase activity, and lysosomal enzymes. The difference in macrophage function is expected to be a further reference in active DR-TB treatment or preventive therapy.

结核病(TB)的耐药性已成为消除结核病的障碍。患者耐药性结核病的传播增加了密切接触者原发性耐药性结核病的发病率。因此,有必要在预防性治疗中加入免疫学方法。本研究重点研究了与潜伏肺结核患者或健康病例的密切接触者相比,确诊为活动性耐药肺结核患者的溶酶体酶活性、氧爆发以及巨噬细胞的附着能力。我们测量了巨噬细胞的氧爆发能力(水溶性四唑盐(WST)试验、一氧化氮产生量和髓过氧化物酶活性)和溶酶体的降解能力(β-葡糖醛酸酶和酸性磷酸酶的活性)。印度尼西亚大学医院招募了 6 名活动性 DR-TB 患者和 18 名密切接触者(8 名潜伏肺结核感染者(LTBI);10 名健康者)。LTBI组的巨噬细胞附着率高于其他组。活动性 DR-TB 组的 NO 生成量、髓过氧化物酶活性、β-葡萄糖醛酸酶和酸性磷酸酶较高。吞噬作用与 NO 生成、髓过氧化物酶活性和溶酶体酶之间呈负相关。巨噬细胞功能的差异有望成为活动性 DR-TB 治疗或预防性治疗的进一步参考。
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引用次数: 0
Steroid immune responsive gene regulation in Mycobacterium tuberculosis infection in vitro 结核分枝杆菌体外感染中的类固醇免疫反应基因调控
IF 3.2 3区 医学 Q3 IMMUNOLOGY Pub Date : 2024-02-20 DOI: 10.1016/j.tube.2024.102497
Maria Eduarda de Albuquerque Borborema , Débora Elienai de Oliveira Miranda , Thays Maria Costa de Lucena , Virgínia Maria Barros de Lorena , Michelle Christiane da Silva Rabello , Jaqueline de Azevêdo Silva

Tuberculosis (TB) is an infectious disease displaying a multifactorial pathology. The immunomodulatory role attributed to steroid hormones, such as vitamin D3 (VD3) and 17β-estradiol (E2), highlighted the importance of these hormones against Mycobacterium tuberculosis (Mtb) infection. In order to understand their influence upon gene expression of immune and inflammatory responsive genes against Mtb we tested it in vitro using peripheral blood mononuclear cells (PBMCs). Cells were pretreated with VD3 (50 ng/mL) or E2 (100 nM/mL) and co-cultured with H37Rv Mtb or stimulated with lipopolysaccharide from Escherichia coli (LPS). After 24 h and 72 h of co-culture the Mtb viability in macrophages test was performed, as well the total RNA isolation for gene expression analysis by RT-qPCR of the following target genes: NLRP3, DC-SIGN, IL-1β, and IL-10. We also measured IL-10, TNF, IFN-γ, IL-4, IL-6, and IL-2 supernatant levels. As the main results, we found that VD3 and E2 downregulated the expression of inflammatory genes NLRP3, IL-1β, and IL-10 expression in Mtb co-cultured cells. Finally, VD3 treatment increased the release of the cytokine IFN-γ in Mtb-infected cells, while E2 treatment inhibited the release of IL-10, TNF, IFN-γ, and IL-6. Therefore, we report an immunogenetic influence of VD3 and E2 upon Mtb co-culture.

结核病(TB)是一种多因素致病的传染性疾病。维生素 D3(VD3)和 17β-雌二醇(E2)等类固醇激素具有免疫调节作用,这凸显了这些激素对结核分枝杆菌(Mtb)感染的重要性。为了了解这些激素对结核分枝杆菌免疫和炎症反应基因表达的影响,我们使用外周血单核细胞(PBMCs)进行了体外测试。用 VD3(50 ng/mL)或 E2(100 nM/mL)预处理细胞,然后与 H37Rv Mtb 共同培养或用大肠杆菌脂多糖(LPS)刺激细胞。共培养 24 小时和 72 小时后,检测巨噬细胞中 Mtb 的存活率,并分离总 RNA,通过 RT-qPCR 对以下目标基因进行基因表达分析:NLRP3、DC-SIGN、IL-1β 和 IL-10。我们还测定了 IL-10、TNF、IFN-γ、IL-4、IL-6 和 IL-2 上清水平。主要结果显示,VD3 和 E2 下调了 Mtb 共培养细胞中炎症基因 NLRP3、IL-1β 和 IL-10 的表达。最后,VD3 处理增加了 Mtb 感染细胞中细胞因子 IFN-γ 的释放,而 E2 处理则抑制了 IL-10、TNF、IFN-γ 和 IL-6 的释放。因此,我们报告了 VD3 和 E2 对 Mtb 协同培养的免疫原性影响。
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引用次数: 0
Analysis of T-lymphocyte subsets and risk factors in children with tuberculosis 结核病患儿的 T 淋巴细胞亚群和风险因素分析
IF 3.2 3区 医学 Q3 IMMUNOLOGY Pub Date : 2024-02-20 DOI: 10.1016/j.tube.2024.102496
Wei-Wei Ma , Ling-Chao Wang , De-An Zhao , Na Wei , Jun-Wei Cui , Shu-Jun Li
<div><h3>Background</h3><p>Tuberculosis (TB) is not only related to infection but also involves immune factors. This study explores the changes in T-lymphocyte subsets in children with TB who are human immunodeficiency virus (HIV)-negative and examines their relationship using chest computed tomography (CT) scans. Additionally, the study identifies risk factors for severe TB (STB) in children and establishes relevant risk prediction models.</p></div><div><h3>Methods</h3><p>We recruited 235 participants between 2018 and 2022, comprising 176 paediatric patients with TB who were HIV-negative and 59 age-matched children with bacterial community-acquired pneumonia (CAP). We quantitatively analysed and compared T-lymphocyte subsets between the two groups and among different types of TB infection. Both univariate and multivariate analyses of clinical and laboratory characteristics were conducted to identify independent risk factors for STB in children and to establish a risk prediction model.</p></div><div><h3>Results</h3><p>The absolute counts of CD3, CD4 and CD8 T-cells in children with TB infection decreased significantly compared with bacterial CAP. The percentage of CD8 T-cells increased, whereas the percentage of CD4 T-cells did not change significantly. The absolute count of CD3, CD4 and CD8 T-cells in extrapulmonary TB (EPTB) was significantly higher than in extra-respiratory TB, with unchanged subset percentages. According to chest CT lesion classification, CD4 T-cell counts decreased significantly in S3 compared with S1 or S2, with no significant change in CD3 and CD8 T-cell counts and percentages. No significant differences were observed in lymphocyte subset counts and percentages between S1 and S2. Univariate analyses indicated that factors such as age, symptom duration, white blood cell count, platelet count, neutrophil-to-lymphocyte ratio (NLR), erythrocyte sedimentation rate, prealbumin level, albumin level, globulin level, albumin/globulin (A/G) ratio, high-sensitivity C-reactive protein (Hs-CRP) level and CD4 and CD8 T-cell counts are associated with STB. Multivariate logistic regression analysis revealed that age, Hs-CRP level, NLR, symptom duration and A/G ratio are independent risk factors for STB in children. Increased age, Hs-CRP levels and NLR, along with decreased A/G, correlate with increased susceptibility to STB. A nomogram model, based on these independent risk factors, demonstrated an area under the receiver operating characteristics curve of 0.867 (95% CI: 0.813–0.921). Internal verification confirmed the model's accuracy, with the calibration curve approaching the ideal and the Hosmer–Lemeshow goodness-of-fit test showing consistent results (χ<sup>2</sup> = 12.212, p = 0.142).</p></div><div><h3>Conclusion</h3><p>In paediatric patients with TB, the absolute counts of all lymphocyte subsets were considerably reduced compared with those in patients with bacterial CAP. Clinicians should consider the possibility of EPTB infecti
背景结核病(TB)不仅与感染有关,还涉及免疫因素。本研究探讨了人类免疫缺陷病毒(HIV)阴性肺结核患儿T淋巴细胞亚群的变化,并使用胸部计算机断层扫描(CT)检查了它们之间的关系。此外,该研究还确定了儿童重症结核病(STB)的风险因素,并建立了相关的风险预测模型。方法我们在 2018 年至 2022 年间招募了 235 名参与者,其中包括 176 名 HIV 阴性的结核病儿科患者和 59 名年龄匹配的细菌性社区获得性肺炎(CAP)患儿。我们定量分析并比较了两组患者之间以及不同类型肺结核感染之间的 T 淋巴细胞亚群。我们对临床和实验室特征进行了单变量和多变量分析,以确定儿童 STB 的独立风险因素并建立风险预测模型。CD8 T 细胞的百分比有所增加,而 CD4 T 细胞的百分比变化不大。肺外结核(EPTB)中 CD3、CD4 和 CD8 T 细胞的绝对数量明显高于呼吸道外结核,但亚群百分比没有变化。根据胸部 CT 病变分类,与 S1 或 S2 相比,S3 的 CD4 T 细胞数量明显减少,CD3 和 CD8 T 细胞数量和百分比无明显变化。S1 和 S2 的淋巴细胞亚群数量和百分比没有明显差异。单变量分析表明,年龄、症状持续时间、白细胞计数、血小板计数、中性粒细胞与淋巴细胞比值(NLR)、红细胞沉降率、前白蛋白水平、白蛋白水平、球蛋白水平、白蛋白/球蛋白(A/G)比值、高敏 C 反应蛋白(Hs-CRP)水平以及 CD4 和 CD8 T 细胞计数等因素与 STB 相关。多变量逻辑回归分析表明,年龄、Hs-CRP水平、NLR、症状持续时间和A/G比值是儿童STB的独立危险因素。年龄、Hs-CRP水平和NLR的增加以及A/G比值的降低与STB的易感性增加相关。基于这些独立风险因素的提名图模型显示,接收器操作特征曲线下的面积为 0.867(95% CI:0.813-0.921)。内部验证证实了该模型的准确性,校准曲线接近理想值,Hosmer-Lemeshow 拟合度检验显示结果一致(χ2 = 12.212,P = 0.142)。对于 CD3、CD4 和 CD8 T 细胞计数高于 ERTB 组的肺结核患儿,临床医生应考虑其除呼吸道感染外还感染 EPTB 的可能性。此外,CD4 T 细胞计数与胸部 CT 病变的严重程度密切相关。年龄、症状持续时间、A/G 比值、Hs-CRP 水平和 NLR 被确定为 STB 的独立风险因素。基于这些因素的提名图模型可有效区分和校准儿童 STB 的预测。
{"title":"Analysis of T-lymphocyte subsets and risk factors in children with tuberculosis","authors":"Wei-Wei Ma ,&nbsp;Ling-Chao Wang ,&nbsp;De-An Zhao ,&nbsp;Na Wei ,&nbsp;Jun-Wei Cui ,&nbsp;Shu-Jun Li","doi":"10.1016/j.tube.2024.102496","DOIUrl":"10.1016/j.tube.2024.102496","url":null,"abstract":"&lt;div&gt;&lt;h3&gt;Background&lt;/h3&gt;&lt;p&gt;Tuberculosis (TB) is not only related to infection but also involves immune factors. This study explores the changes in T-lymphocyte subsets in children with TB who are human immunodeficiency virus (HIV)-negative and examines their relationship using chest computed tomography (CT) scans. Additionally, the study identifies risk factors for severe TB (STB) in children and establishes relevant risk prediction models.&lt;/p&gt;&lt;/div&gt;&lt;div&gt;&lt;h3&gt;Methods&lt;/h3&gt;&lt;p&gt;We recruited 235 participants between 2018 and 2022, comprising 176 paediatric patients with TB who were HIV-negative and 59 age-matched children with bacterial community-acquired pneumonia (CAP). We quantitatively analysed and compared T-lymphocyte subsets between the two groups and among different types of TB infection. Both univariate and multivariate analyses of clinical and laboratory characteristics were conducted to identify independent risk factors for STB in children and to establish a risk prediction model.&lt;/p&gt;&lt;/div&gt;&lt;div&gt;&lt;h3&gt;Results&lt;/h3&gt;&lt;p&gt;The absolute counts of CD3, CD4 and CD8 T-cells in children with TB infection decreased significantly compared with bacterial CAP. The percentage of CD8 T-cells increased, whereas the percentage of CD4 T-cells did not change significantly. The absolute count of CD3, CD4 and CD8 T-cells in extrapulmonary TB (EPTB) was significantly higher than in extra-respiratory TB, with unchanged subset percentages. According to chest CT lesion classification, CD4 T-cell counts decreased significantly in S3 compared with S1 or S2, with no significant change in CD3 and CD8 T-cell counts and percentages. No significant differences were observed in lymphocyte subset counts and percentages between S1 and S2. Univariate analyses indicated that factors such as age, symptom duration, white blood cell count, platelet count, neutrophil-to-lymphocyte ratio (NLR), erythrocyte sedimentation rate, prealbumin level, albumin level, globulin level, albumin/globulin (A/G) ratio, high-sensitivity C-reactive protein (Hs-CRP) level and CD4 and CD8 T-cell counts are associated with STB. Multivariate logistic regression analysis revealed that age, Hs-CRP level, NLR, symptom duration and A/G ratio are independent risk factors for STB in children. Increased age, Hs-CRP levels and NLR, along with decreased A/G, correlate with increased susceptibility to STB. A nomogram model, based on these independent risk factors, demonstrated an area under the receiver operating characteristics curve of 0.867 (95% CI: 0.813–0.921). Internal verification confirmed the model's accuracy, with the calibration curve approaching the ideal and the Hosmer–Lemeshow goodness-of-fit test showing consistent results (χ&lt;sup&gt;2&lt;/sup&gt; = 12.212, p = 0.142).&lt;/p&gt;&lt;/div&gt;&lt;div&gt;&lt;h3&gt;Conclusion&lt;/h3&gt;&lt;p&gt;In paediatric patients with TB, the absolute counts of all lymphocyte subsets were considerably reduced compared with those in patients with bacterial CAP. Clinicians should consider the possibility of EPTB infecti","PeriodicalId":23383,"journal":{"name":"Tuberculosis","volume":"146 ","pages":"Article 102496"},"PeriodicalIF":3.2,"publicationDate":"2024-02-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1472979224000222/pdfft?md5=d9f92cecb2ef90ab4b025bcead611fc8&pid=1-s2.0-S1472979224000222-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139920177","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Demonstrating the utility of the ex vivo murine mycobacterial growth inhibition assay (MGIA) for high-throughput screening of tuberculosis vaccine candidates against multiple Mycobacterium tuberculosis complex strains 展示体内外鼠分枝杆菌生长抑制试验 (MGIA) 在高通量筛选结核病候选疫苗中对多种结核分枝杆菌复合菌株的效用
IF 3.2 3区 医学 Q3 IMMUNOLOGY Pub Date : 2024-02-13 DOI: 10.1016/j.tube.2024.102494
Hannah Painter , Sam Willcocks , Andrea Zelmer , Rajko Reljic , Rachel Tanner , Helen Fletcher

Human tuberculosis (TB) is caused by various members of the Mycobacterium tuberculosis (Mtb) complex. Differences in host response to infection have been reported, illustrative of a need to evaluate efficacy of novel vaccine candidates against multiple strains in preclinical studies. We previously showed that the murine lung and spleen direct mycobacterial growth inhibition assay (MGIA) can be used to assess control of ex vivo mycobacterial growth by host cells. The number of mice required for the assay is significantly lower than in vivo studies, facilitating testing of multiple strains and/or the incorporation of other cellular analyses. Here, we provide proof-of-concept that the murine MGIA can be applied to evaluate vaccine-induced protection against multiple Mtb clinical isolates. Using an ancient and modern strain of the Mtb complex, we demonstrate that ex vivo bacillus Calmette–Guérin (BCG)-mediated mycobacterial growth inhibition recapitulates protection observed in the lung and spleen following in vivo infection of mice. Further, we provide the first report of cellular and transcriptional correlates of BCG-induced growth inhibition in the lung MGIA. The ex vivo MGIA represents a promising platform to gain early insight into vaccine performance against a collection of Mtb strains and improve preclinical evaluation of TB vaccine candidates.

人类结核病(TB)是由结核分枝杆菌(Mtb)复合体的不同成员引起的。据报道,宿主对感染的反应存在差异,这说明需要在临床前研究中评估新型候选疫苗对多种菌株的疗效。我们之前研究表明,小鼠肺和脾脏直接分枝杆菌生长抑制试验(MGIA)可用于评估宿主细胞对体内外分枝杆菌生长的控制。该试验所需的小鼠数量明显少于体内研究,便于对多个菌株进行检测和/或纳入其他细胞分析。在此,我们提供了小鼠 MGIA 可用于评估疫苗诱导的对多种 Mtb 临床分离株的保护作用的概念证明。通过使用一种古老和现代的 Mtb 复合菌株,我们证明了体内外卡介苗(BCG)介导的分枝杆菌生长抑制再现了小鼠体内感染后在肺部和脾脏观察到的保护作用。此外,我们还首次报道了卡介苗诱导的肺部 MGIA 生长抑制的细胞和转录相关性。体内外 MGIA 是一个很有前景的平台,它能让我们及早了解疫苗对一系列 Mtb 菌株的免疫效果,并改进结核病候选疫苗的临床前评估。
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引用次数: 0
Caveolin-1 affects early mycobacterial infection and apoptosis in macrophages and mice Caveolin-1 影响巨噬细胞和小鼠的早期分枝杆菌感染和细胞凋亡
IF 3.2 3区 医学 Q3 IMMUNOLOGY Pub Date : 2024-02-12 DOI: 10.1016/j.tube.2024.102493
Yuqing Wu , Andrea Riehle , Barbara Pollmeier , Stephanie Kadow , Fabian Schumacher , Marek Drab , Burkhard Kleuser , Erich Gulbins , Heike Grassmé

Tuberculosis, caused by Mycobacterium tuberculosis, remains one of the deadliest infections in humans. Because Mycobacterium bovis Bacillus Calmette-Guérin (BCG) share genetic similarities with Mycobacterium tuberculosis, it is often used as a model to elucidate the molecular mechanisms of more severe tuberculosis infection. Caveolin-1 has been implied in many physiological processes and diseases, but it's role in mycobacterial infections has barely been studied. We isolated macrophages from Wildtype or Caveolin-1 deficient mice and analyzed hallmarks of infection, such as internalization, induction of autophagy and apoptosis. For in vivo assays we intravenously injected mice with BCG and investigated tissues for bacterial load with colony-forming unit assays, bioactive lipids with mass spectrometry and changes of protein expressions by Western blotting. Our results revealed that Caveolin-1 was important for early killing of BCG infection in vivo and in vitro, controlled acid sphingomyelinase (Asm)-dependent ceramide formation, apoptosis and inflammatory cytokines upon infection with BCG. In accordance, Caveolin-1 deficient mice and macrophages showed higher bacterial burdens in the livers. The findings indicate that Caveolin-1 plays a role in infection of mice and murine macrophages with BCG, by controlling cellular apoptosis and inflammatory host response. These clues might be useful in the fight against tuberculosis.

由结核分枝杆菌引起的结核病仍然是人类最致命的传染病之一。由于牛分枝杆菌(Bacillus Calmette-Guérin,BCG)与结核分枝杆菌在基因上有相似之处,因此经常被用作模型来阐明更严重的结核感染的分子机制。Caveolin-1在许多生理过程和疾病中都有暗示作用,但它在结核分枝杆菌感染中的作用却鲜有研究。我们从野生型或Caveolin-1缺陷型小鼠体内分离出巨噬细胞,并分析了感染的特征,如内化、诱导自噬和细胞凋亡。在体内试验中,我们给小鼠静脉注射卡介苗,并用菌落形成单位测定法检测组织中的细菌量,用质谱法检测生物活性脂质,用 Western 印迹法检测蛋白质表达的变化。我们的研究结果表明,Caveolin-1 在体内和体外对卡介苗感染的早期杀灭具有重要作用,在卡介苗感染时可控制酸性鞘磷脂酶(Asm)依赖的神经酰胺形成、细胞凋亡和炎性细胞因子。因此,缺乏 Caveolin-1 的小鼠和巨噬细胞在肝脏中显示出更高的细菌负荷。研究结果表明,Caveolin-1 通过控制细胞凋亡和宿主炎症反应,在小鼠和巨噬细胞感染卡介苗时发挥作用。这些线索可能有助于抗击结核病。
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引用次数: 0
Transmission of drug-resistant Mycobacterium tuberculosis isolates between Finnish- and foreign-born cases, 2014–2021: A molecular epidemiological study 2014-2021年芬兰和外国出生病例之间耐药结核分枝杆菌分离株的传播:分子流行病学研究
IF 3.2 3区 医学 Q3 IMMUNOLOGY Pub Date : 2024-02-12 DOI: 10.1016/j.tube.2024.102492
Jiahui Zhu , Marjo Haanpera , Silja Mentula , Olli Vapalahti , Hanna Soini , Tarja Sironen , Ravi Kant , Fathiah Zakham

Background

Data on the molecular epidemiology and transmission of drug-resistant Mycobacterium tuberculosis (MTB) in low-incidence settings with immigration from high-incidence settings is limited.

Method

We included 115 drug-resistant (DR) MTB isolates with whole-genome sequencing data isolated in Finland between 2014 and 2021. Potential transmission clusters were identified using a threshold of 12 single-nucleotide polymorphisms (SNPs). Highly related clusters were identified using a threshold of 5 SNPs.

Result

Of the 115 DR MTB isolates, 31 (27.0%) isolates were from Finnish-born cases and 84 (73.0%) were from foreign-born cases. The proportion of multidrug-resistant (MDR) MTB isolates (30/84, 35.7%) from foreign-born cases was higher than that of MDR MTB isolates from Finnish-born cases (8/31, 25.8%). Lineage 2 (40/115, 34.8%) and lineage 4 (40/115, 34.8%) were the most prevalent lineages. A total of 25 (21.7%) isolates were classified into eight potential transmission clusters (≤12 SNPs). Furthermore, five highly related clusters (≤5 SNPs) were identified, including three DR MTB isolates from Finnish-born cases and 14 DR isolates from foreign-born cases.

Conclusion

The risk of DR MTB transmission between Finnish- and foreign-born persons is not negligible. Further research on clustering analysis in drug-susceptible MTB is worth to inform tuberculosis management and control in low-incidence settings with increasing immigration.

背景有关耐药结核分枝杆菌(MTB)的分子流行病学和在低发病率地区的传播以及从高发病率地区移民的数据十分有限。方法我们纳入了 2014 年至 2021 年期间在芬兰分离的 115 例具有全基因组测序数据的耐药(DR)MTB 分离物。以 12 个单核苷酸多态性(SNPs)为阈值,确定潜在的传播集群。在115个DR MTB分离株中,31个(27.0%)来自芬兰出生的病例,84个(73.0%)来自外国出生的病例。来自外国出生病例的耐多药(MDR)MTB分离株比例(30/84,35.7%)高于来自芬兰出生病例的耐多药MTB分离株比例(8/31,25.8%)。2系(40/115,34.8%)和4系(40/115,34.8%)是最常见的菌系。共有 25 个(21.7%)分离株被归入 8 个潜在传播集群(≤12 个 SNPs)。此外,还发现了五个高度相关的集群(≤5个SNPs),其中包括3个来自芬兰出生病例的DR MTB分离株和14个来自外国出生病例的DR分离株。在移民日益增多的低发病率地区,对药物敏感型 MTB 的聚类分析值得进一步研究,以便为结核病的管理和控制提供信息。
{"title":"Transmission of drug-resistant Mycobacterium tuberculosis isolates between Finnish- and foreign-born cases, 2014–2021: A molecular epidemiological study","authors":"Jiahui Zhu ,&nbsp;Marjo Haanpera ,&nbsp;Silja Mentula ,&nbsp;Olli Vapalahti ,&nbsp;Hanna Soini ,&nbsp;Tarja Sironen ,&nbsp;Ravi Kant ,&nbsp;Fathiah Zakham","doi":"10.1016/j.tube.2024.102492","DOIUrl":"https://doi.org/10.1016/j.tube.2024.102492","url":null,"abstract":"<div><h3>Background</h3><p>Data on the molecular epidemiology and transmission of drug-resistant <em>Mycobacterium tuberculosis</em> (MTB) in low-incidence settings with immigration from high-incidence settings is limited.</p></div><div><h3>Method</h3><p>We included 115 drug-resistant (DR) MTB isolates with whole-genome sequencing data isolated in Finland between 2014 and 2021. Potential transmission clusters were identified using a threshold of 12 single-nucleotide polymorphisms (SNPs). Highly related clusters were identified using a threshold of 5 SNPs.</p></div><div><h3>Result</h3><p>Of the 115 DR MTB isolates, 31 (27.0%) isolates were from Finnish-born cases and 84 (73.0%) were from foreign-born cases. The proportion of multidrug-resistant (MDR) MTB isolates (30/84, 35.7%) from foreign-born cases was higher than that of MDR MTB isolates from Finnish-born cases (8/31, 25.8%). Lineage 2 (40/115, 34.8%) and lineage 4 (40/115, 34.8%) were the most prevalent lineages. A total of 25 (21.7%) isolates were classified into eight potential transmission clusters (≤12 SNPs). Furthermore, five highly related clusters (≤5 SNPs) were identified, including three DR MTB isolates from Finnish-born cases and 14 DR isolates from foreign-born cases.</p></div><div><h3>Conclusion</h3><p>The risk of DR MTB transmission between Finnish- and foreign-born persons is not negligible. Further research on clustering analysis in drug-susceptible MTB is worth to inform tuberculosis management and control in low-incidence settings with increasing immigration.</p></div>","PeriodicalId":23383,"journal":{"name":"Tuberculosis","volume":"146 ","pages":"Article 102492"},"PeriodicalIF":3.2,"publicationDate":"2024-02-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1472979224000180/pdfft?md5=59447be64e2ef863c826da394eb7ac1e&pid=1-s2.0-S1472979224000180-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139744237","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Efficacies of three drug regimens containing omadacycline to treat Mycobacteroides abscessus disease 含有奥马他环素的三种药物方案治疗脓肿分枝杆菌病的疗效
IF 3.2 3区 医学 Q3 IMMUNOLOGY Pub Date : 2024-02-09 DOI: 10.1016/j.tube.2024.102482
Binayak Rimal , Chandra M. Panthi , Yi Xie , Daniel C. Belz , Elisa H. Ignatius , Christopher K. Lippincott , Daniel H. Deck , Alisa W. Serio , Gyanu Lamichhane

Mycobacteroides abscessus (Mab, also known as Mycobacterium abscessus) causes opportunistic pulmonary and soft tissue infections that are difficult to cure with existing treatments. Omadacycline, a new tetracycline antibiotic, exhibits potent in vitro and in vivo activity against Mab. As regimens containing multiple antibiotics are required to produce a durable cure for Mab disease, we assessed efficacies of three three-drug combinations in a pre-clinical mouse model of pulmonary Mab disease to identify companion drugs with which omadacycline exhibits the highest efficacy. Additionally, we assessed the susceptibility of Mab recovered from mouse lungs after four weeks of exposure to the three triple-drug regimens. Among the three-drug regimens, omadacycline + imipenem + amikacin produced the largest reduction in Mab burden, whereas omadacycline + imipenem + linezolid exhibited the most effective early bactericidal activity. Omadacycline + linezolid + clofazimine, a regimen that can be administered orally, lacked early bactericidal activity but produced a gradual reduction in the lung Mab burden over time. The robust efficacy exhibited by these three regimens in the mouse model supports their further evaluation in patients with Mab lung disease. As we were unable to isolate drug-resistant Mab mutants at the completion of four weeks of treatment, these triple-drug combinations show promise of producing durable cure and minimizing selection of resistant mutants.

脓肿分枝杆菌(Mab,又称脓肿分枝杆菌)会引起机会性肺部和软组织感染,现有疗法难以治愈。奥马他环素是一种新型四环素类抗生素,在体外和体内对马巴表现出强大的抗药性。由于需要使用多种抗生素才能持久治愈马布病,我们在临床前小鼠肺马布病模型中评估了三种药物组合的疗效,以确定与奥美拉唑霉素一起使用疗效最高的配套药物。此外,我们还评估了小鼠肺部在接触三种三联疗法四周后回收的马布病的易感性。在三种药物方案中,奥美拉唑霉素+亚胺培南+阿米卡星能最大程度地减少马巴菌负荷,而奥美拉唑霉素+亚胺培南+利奈唑胺则表现出最有效的早期杀菌活性。奥马大环素+利奈唑烷+氯法齐明是一种可口服的方案,缺乏早期杀菌活性,但随着时间的推移,肺部的马巴菌负荷会逐渐减少。这三种方案在小鼠模型中表现出的强大疗效支持了对马布肺病患者的进一步评估。由于我们无法在完成四周治疗后分离出耐药的马布病突变体,因此这三种药物组合有望产生持久的治愈效果,并最大限度地减少耐药突变体的选择。
{"title":"Efficacies of three drug regimens containing omadacycline to treat Mycobacteroides abscessus disease","authors":"Binayak Rimal ,&nbsp;Chandra M. Panthi ,&nbsp;Yi Xie ,&nbsp;Daniel C. Belz ,&nbsp;Elisa H. Ignatius ,&nbsp;Christopher K. Lippincott ,&nbsp;Daniel H. Deck ,&nbsp;Alisa W. Serio ,&nbsp;Gyanu Lamichhane","doi":"10.1016/j.tube.2024.102482","DOIUrl":"https://doi.org/10.1016/j.tube.2024.102482","url":null,"abstract":"<div><p><em>Mycobacteroides abscessus</em> (<em>Mab,</em> also known as <em>Mycobacterium abscessus</em>) causes opportunistic pulmonary and soft tissue infections that are difficult to cure with existing treatments. Omadacycline, a new tetracycline antibiotic, exhibits potent <em>in vitro</em> and <em>in vivo</em> activity against <em>Mab</em>. As regimens containing multiple antibiotics are required to produce a durable cure for <em>Mab</em> disease, we assessed efficacies of three three-drug combinations in a pre-clinical mouse model of pulmonary <em>Mab</em> disease to identify companion drugs with which omadacycline exhibits the highest efficacy. Additionally, we assessed the susceptibility of <em>Mab</em> recovered from mouse lungs after four weeks of exposure to the three triple-drug regimens. Among the three-drug regimens, omadacycline + imipenem + amikacin produced the largest reduction in <em>Mab</em> burden, whereas omadacycline + imipenem + linezolid exhibited the most effective early bactericidal activity. Omadacycline + linezolid + clofazimine, a regimen that can be administered orally, lacked early bactericidal activity but produced a gradual reduction in the lung <em>Mab</em> burden over time. The robust efficacy exhibited by these three regimens in the mouse model supports their further evaluation in patients with <em>Mab</em> lung disease. As we were unable to isolate drug-resistant <em>Mab</em> mutants at the completion of four weeks of treatment, these triple-drug combinations show promise of producing durable cure and minimizing selection of resistant mutants.</p></div>","PeriodicalId":23383,"journal":{"name":"Tuberculosis","volume":"146 ","pages":"Article 102482"},"PeriodicalIF":3.2,"publicationDate":"2024-02-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1472979224000088/pdfft?md5=386b6f32525281577510225b87d29728&pid=1-s2.0-S1472979224000088-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139744238","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Corrigendum to “Quantitative proteomics reveals plasma protein profile and potential pathways in pulmonary tuberculosis patients with and without diabetes” [Tuberculosis 143 (2023) 102424] 定量蛋白质组学揭示伴有和不伴有糖尿病的肺结核患者的血浆蛋白谱和潜在通路》[结核病 143 (2023) 1024]更正
IF 3.2 3区 医学 Q3 IMMUNOLOGY Pub Date : 2024-02-02 DOI: 10.1016/j.tube.2024.102481
Xinxin He , Yunguang Wang , Yue Yang , Qiang He , Lifang Sun , Juan Jin
{"title":"Corrigendum to “Quantitative proteomics reveals plasma protein profile and potential pathways in pulmonary tuberculosis patients with and without diabetes” [Tuberculosis 143 (2023) 102424]","authors":"Xinxin He ,&nbsp;Yunguang Wang ,&nbsp;Yue Yang ,&nbsp;Qiang He ,&nbsp;Lifang Sun ,&nbsp;Juan Jin","doi":"10.1016/j.tube.2024.102481","DOIUrl":"10.1016/j.tube.2024.102481","url":null,"abstract":"","PeriodicalId":23383,"journal":{"name":"Tuberculosis","volume":"146 ","pages":"Article 102481"},"PeriodicalIF":3.2,"publicationDate":"2024-02-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1472979224000076/pdfft?md5=2955bfccfbe165c5c7d79146cfbbd789&pid=1-s2.0-S1472979224000076-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139661463","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Diagnosing osteoarticular tuberculosis and detecting rifampicin resistance: A comparative analysis of Truenat MTB Plus vs GeneXpert Ultra 诊断骨关节结核并检测利福平耐药性:Truenat MTB Plus 与 GeneXpert Ultra 的比较分析
IF 3.2 3区 医学 Q3 IMMUNOLOGY Pub Date : 2024-02-01 DOI: 10.1016/j.tube.2024.102483
Kusum Sharma , Megha Sharma , Aman Sharma , Mandeep Singh Dhillon

Setting

Diagnosing osteoarticular tuberculosis (OATB) and detecting drug resistance is a challenge in an endemic country like India.

Objective

Truenat MTB Plus assay (TruPlus), a chip-based portable machine, was compared with GeneXpert Ultra (GxUltra) for diagnosing drug-resistant OATB.

Design

115 synovial fluid and pus specimens [22 culture-positive confirmed, 58 culture-negative clinically-suspected, 35 non-TB controls] processed between 2017 and 2023 were subjected to TruPlus, GxUltra and multiplex-PCR for diagnosing OATB. They were further screened for rifampicin resistance using TruRif chip. The performance was evaluated against composite reference standard, phenotypic drug susceptibility testing and rpoB gene sequencing.

Results

TruPlus, GxUltra and MPCR detected 77.5 %, 71.25 %, and 83.75 %, cases of OATB, respectively. TruPlus detected five additional cases missed by GxUltra. The performance of TruPlus was comparable to GxUltra (p = 0.074) and to MPCR (p = 0.074), while performance of GxUltra was significantly inferior to MPCR (p = 0.004). The overall agreement with reference standard was substantial for TruPlus and MPCR and moderate for GxUltra. Both TruRif and GxUltra reported 4 cases as rifampicin resistant.

Conclusion

TruPlus along with TruRif offers better sensitivity than GxUltra. Its compact and portable platform allows wider application in peripheral settings, thus making it a pragmatic solution for diagnosing OATB and its drug resistance.

背景在印度这样一个结核病流行的国家,诊断骨关节结核(OATB)和检测耐药性是一项挑战。目的将基于芯片的便携式设备Truenat MTB Plus测定(TruPlus)与GeneXpert Ultra(GxUltra)进行比较,以诊断耐药OATB。对2017年至2023年间处理的1115份滑液和脓液标本[22份培养阳性确诊标本、58份培养阴性临床疑似标本、35份非结核病对照标本]进行了TruPlus、GxUltra和多重PCR检测,以诊断OATB。使用 TruRif 芯片进一步筛查利福平耐药性。结果TruPlus、GxUltra 和 MPCR 分别检测出 77.5%、71.25% 和 83.75% 的 OATB 病例。TruPlus 发现了 GxUltra 错过的另外 5 个病例。TruPlus 的性能与 GxUltra(p = 0.074)和 MPCR(p = 0.074)相当,而 GxUltra 的性能则明显低于 MPCR(p = 0.004)。TruPlus 和 MPCR 与参考标准的总体一致性很高,GxUltra 的一致性中等。结论TruPlus 和 TruRif 比 GxUltra 具有更高的灵敏度。它的平台小巧便携,可广泛应用于周边环境,因此是诊断 OATB 及其耐药性的实用解决方案。
{"title":"Diagnosing osteoarticular tuberculosis and detecting rifampicin resistance: A comparative analysis of Truenat MTB Plus vs GeneXpert Ultra","authors":"Kusum Sharma ,&nbsp;Megha Sharma ,&nbsp;Aman Sharma ,&nbsp;Mandeep Singh Dhillon","doi":"10.1016/j.tube.2024.102483","DOIUrl":"10.1016/j.tube.2024.102483","url":null,"abstract":"<div><h3>Setting</h3><p><span>Diagnosing osteoarticular tuberculosis (OATB) and detecting </span>drug resistance is a challenge in an endemic country like India.</p></div><div><h3>Objective</h3><p>Truenat MTB Plus assay (TruPlus), a chip-based portable machine, was compared with GeneXpert Ultra (GxUltra) for diagnosing drug-resistant OATB.</p></div><div><h3>Design</h3><p><span>115 synovial fluid and pus specimens [22 culture-positive confirmed, 58 culture-negative clinically-suspected, 35 non-TB controls] processed between 2017 and 2023 were subjected to TruPlus, GxUltra and multiplex-PCR for diagnosing OATB. They were further screened for </span>rifampicin resistance using TruRif chip. The performance was evaluated against composite reference standard, phenotypic drug susceptibility testing and rpoB gene sequencing.</p></div><div><h3>Results</h3><p>TruPlus, GxUltra and MPCR detected 77.5 %, 71.25 %, and 83.75 %, cases of OATB, respectively. TruPlus detected five additional cases missed by GxUltra. The performance of TruPlus was comparable to GxUltra (p = 0.074) and to MPCR (p = 0.074), while performance of GxUltra was significantly inferior to MPCR (p = 0.004). The overall agreement with reference standard was substantial for TruPlus and MPCR and moderate for GxUltra. Both TruRif and GxUltra reported 4 cases as rifampicin resistant.</p></div><div><h3>Conclusion</h3><p>TruPlus along with TruRif offers better sensitivity than GxUltra. Its compact and portable platform allows wider application in peripheral settings, thus making it a pragmatic solution for diagnosing OATB and its drug resistance.</p></div>","PeriodicalId":23383,"journal":{"name":"Tuberculosis","volume":"145 ","pages":"Article 102483"},"PeriodicalIF":3.2,"publicationDate":"2024-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139661211","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Tuberculosis
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