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Construction and expression of Mycobacterium tuberculosis fusion protein SHR3 and its immunogenicity analysis in combination with various adjuvants 构建和表达结核分枝杆菌融合蛋白 SHR3 及其与各种佐剂结合的免疫原性分析
IF 3.2 3区 医学 Q3 IMMUNOLOGY Pub Date : 2024-01-23 DOI: 10.1016/j.tube.2024.102480
Zian Zhang , Lifa Xu , Xiaochun Wang , LingYun Kong , Zilun Shi , Qiangsen Zhong , Yun Xu , Jianghong Wang

Tuberculosis (TB) today remains the leading cause of global deaths due to infectious bacterial pathogens. The Bacillus Calmette-Guérin (BCG) vaccine is the only vaccine clinically used to prevent TB. However, its limitations in preventing latent infection and TB reactivation mean that it does not provide comprehensive protection. In this study, we successfully constructed and expressed the multistage fusion protein, SHR3, and used whole blood IFN-γ release assay (WBIA) with flow cytometry to detect antigen specificity, further confirmed by enzyme-linked immunosorbent assay (ELISA). SHR3 and its subfractional proteins stimulated the level of IFN-γ production by lymphocytes from M. tb-infected patients, inducing the production of single-positive and double-positive CD4+ and CD8+ T cells with IFN-γ and IL-2, at levels significantly higher than those of healthy controls. The fusion protein and complex adjuvant group (SHR3/DMT) induced mice to produce significantly higher levels of IgG antibodies and their subclasses, with IgG2a/IgG1 results showing a convergent Th1-type response; mice in the BCG + SHR3/DMT group induced secretion of the highest levels of IL-2, and TNF-α, irrespective of stimulation with purified protein derivative or SHR3. These findings suggest that SHR3/DMT could be a potential subunit vaccine candidate that may serve as an effective booster vaccine after BCG primary immunization.

如今,结核病(TB)仍是传染性细菌病原体导致全球死亡的主要原因。卡介苗(BCG)是临床上用于预防结核病的唯一疫苗。然而,卡介苗在预防潜伏感染和结核再活化方面的局限性意味着它不能提供全面的保护。在这项研究中,我们成功构建并表达了多级融合蛋白 SHR3,并利用流式细胞术进行了全血 IFN-γ 释放测定(WBIA)以检测抗原特异性,酶联免疫吸附测定(ELISA)进一步证实了这一点。SHR3及其亚组分蛋白能刺激M. tb感染患者淋巴细胞产生IFN-γ,诱导产生单阳性和双阳性CD4+和CD8+T细胞,并产生IFN-γ和IL-2,其水平明显高于健康对照组。融合蛋白和复合佐剂组(SHR3/DMT)诱导小鼠产生的IgG抗体及其亚类水平明显较高,IgG2a/IgG1结果显示了趋同的Th1型反应;卡介苗+SHR3/DMT组小鼠诱导分泌的IL-2和TNF-α水平最高,与纯化蛋白衍生物或SHR3的刺激无关。这些研究结果表明,SHR3/DMT可能是一种潜在的亚单位候选疫苗,可作为卡介苗初次免疫后的有效增效疫苗。
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引用次数: 0
The use of Mycobacterium tuberculosis H37Ra-infected immunocompetent mice as an in vivo model of persisters 利用结核分枝杆菌 H37Ra 感染的免疫功能健全小鼠作为顽固病菌的体内模型
IF 3.2 3区 医学 Q3 IMMUNOLOGY Pub Date : 2024-01-18 DOI: 10.1016/j.tube.2024.102479
Neetu Kumari , Romil Sharma , Juned Ali , Gyan Chandra , Sarika Singh , Manju Y. Krishnan

Persistence of Mycobacterium tuberculosis (Mtb) is one of the challenges to successful treatment of tuberculosis (TB). In vitro models of non-replicating Mtb are used to test the efficacy of new molecules against Mtb persisters. The H37Ra strain is attenuated for growth in macrophages and mice. We validated H37Ra-infected immunocompetent mice for testing anti-TB molecules against slow/non-replicating Mtb in vivo. Swiss mice were infected intravenously with H37Ra and monitored for CFU burden and histopathology for a period of 12 weeks. The bacteria multiplied at a slow pace reaching a maximum load of ∼106 in 8–12 weeks depending on the infection dose, accompanied by time and dose-dependent histopathological changes in the lungs. Surprisingly, four-weeks of treatment with isoniazid-rifampicin-ethambutol-pyrazinamide combination caused only 0.4 log10 and 1 log10 reduction in CFUs in lungs and spleen respectively. The results show that ∼40 % of the H37Ra bacilli in lungs are persisters after 4 weeks of anti-TB therapy. Isoniazid/rifampicin monotherapy also showed similar results. A combination of bedaquiline and isoniazid reduced the CFU counts to <200 (limit of detection), compared to ∼5000 CFUs by isoniazid alone. The study demonstrates an in vivo model of Mtb persisters for testing new leads using a BSL-2 strain.

结核分枝杆菌(Mtb)的持续存在是成功治疗结核病(TB)的挑战之一。非复制 Mtb 的体外模型被用来测试新分子对 Mtb 持久体的疗效。H37Ra 菌株在巨噬细胞和小鼠体内的生长能力减弱。我们验证了 H37Ra 感染免疫功能健全的小鼠,用于测试抗结核分子对慢速/非复制 Mtb 的体内疗效。瑞士小鼠经静脉感染 H37Ra,并在 12 周内监测其 CFU 负担和组织病理学。细菌以缓慢的速度繁殖,根据感染剂量的不同,在 8-12 周内达到最大负荷量 106 ∼106,同时肺部组织病理学变化与时间和剂量有关。令人惊讶的是,使用异烟肼-利福平-乙胺丁醇-吡嗪酰胺复方制剂治疗 4 周后,肺部和脾脏中的 CFU 只分别减少了 0.4 log10 和 1 log10。结果表明,经过 4 周的抗结核治疗后,肺部有 40% 的 H37Ra 杆菌是宿主。异烟肼/利福平单一疗法也显示出类似的结果。贝达喹啉和异烟肼联合使用可将CFU数量减少到200(检测限),而单用异烟肼则可减少到5000 CFU。该研究展示了一种用于使用 BSL-2 菌株测试新线索的 Mtb 持久病菌体内模型。
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引用次数: 0
Xpert MTB/RIF Ultra for the rapid diagnosis of extrapulmonary tuberculosis in a clinical setting of high tuberculosis prevalence country and interpretation of ‘trace’ results Xpert MTB/RIF Ultra 用于在结核病高发国家的临床环境中快速诊断肺外结核病并解释 "微量 "结果
IF 3.2 3区 医学 Q3 IMMUNOLOGY Pub Date : 2024-01-08 DOI: 10.1016/j.tube.2024.102478
Rumana Nasrin , Mohammad Khaja Mafij Uddin , Sk Nazmul Kabir , Tanjina Rahman , Samanta Biswas , Aazia Hossain , S.M. Mazidur Rahman , Shahriar Ahmed , Stephane Pouzol , Jonathan Hoffmann , Sayera Banu

To evaluate the diagnostic performance of Xpert MTB/RIF Ultra (Ultra) for the diagnosis of extrapulmonary tuberculosis (EPTB) from different types of extrapulmonary specimens in comparison with culture and composite microbiological reference standard (CRS). A total of 240 specimens were prospectively collected from presumptive EPTB patients between July 2021–January 2022 and tested by Ultra, Xpert, culture and acid-fast bacilli (AFB) smear microscopy. Out of 240 specimens, 35.8 %, 20.8 %, 11.3 %, and 7.1 % were detected as Mycobacterium tuberculosis complex by Ultra, Xpert, culture and AFB microscopy, respectively. An additional 15.0 % cases were detected by Ultra compared to Xpert MTB/RIF (Xpert) assay. A total of 28 (11.7 %) cases were identified as ‘trace’ category by Ultra with indeterminate rifampicin resistance result; of which 36.4 % were clinically confirmed as EPTB. Compared to culture, the sensitivity and specificity of Ultra and Xpert were 100 % and 72.3 %; 92.6 % and 88.3 %, respectively. In comparison with CRS, these were respectively: 98.9 % and 100 %; 57.5 % and 100 %. For individual category of specimens, sensitivity of Ultra was 100 % with varying specificity. We found that Ultra was highly sensitive for the rapid diagnosis of EPTB and has extensive potential over current diagnostics in high TB burden countries, but ‘trace’ results should be interpreted with caution.

目的:评估 Xpert MTB/RIF Ultra(Ultra)与培养和复合微生物参考标准(CRS)相比在诊断不同类型肺外标本的肺外结核病(EPTB)方面的诊断性能。2021 年 7 月至 2022 年 1 月期间,研究人员前瞻性地从推定肺结核患者身上采集了 240 份标本,并通过 Ultra、Xpert、培养和酸性无菌杆菌(AFB)涂片显微镜进行了检测。在 240 份标本中,经 Ultra、Xpert、培养和 AFB 涂片显微镜检测,分别有 35.8%、20.8%、11.3% 和 7.1%的标本被检测为复合结核分枝杆菌。与 Xpert MTB/RIF(Xpert)检测相比,Ultra 检测出的病例增加了 15.0%。经 Ultra 检测,共有 28 例(11.7%)病例被确定为 "微量 "类别,且利福平耐药性结果不确定;其中 36.4% 经临床确诊为 EPTB。与培养相比,Ultra 和 Xpert 的敏感性和特异性分别为 100 % 和 72.3 %;92.6 % 和 88.3 %。与 CRS 相比,敏感性和特异性分别为分别为 98.9 % 和 100 %;57.5 % 和 100 %。对于不同类别的标本,Ultra 的灵敏度为 100%,特异性各不相同。我们发现,Ultra 对 EPTB 的快速诊断具有很高的灵敏度,与结核病高负担国家的现有诊断方法相比具有广泛的潜力,但对 "微量 "结果的解释应谨慎。
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引用次数: 0
Rv0495c regulates redox homeostasis in Mycobacterium tuberculosis Rv0495c 调节结核分枝杆菌的氧化还原平衡
IF 3.2 3区 医学 Q3 IMMUNOLOGY Pub Date : 2024-01-06 DOI: 10.1016/j.tube.2024.102477
Rahul Pal , Sakshi Talwar , Manitosh Pandey , Vaibhav Kumar Nain , Taruna Sharma , Shaifali Tyagi , Vishawjeet Barik , Shweta Chaudhary , Sonu Kumar Gupta , Yashwant Kumar , Ranjan Nanda , Amit Singhal , Amit Kumar Pandey

Mycobacterium tuberculosis (Mtb) has evolved sophisticated surveillance mechanisms to neutralize the ROS-induces toxicity which otherwise would degrade a variety of biological molecules including proteins, nucleic acids and lipids. In the present study, we find that Mtb lacking the Rv0495c gene (ΔRv0495c) is presented with a highly oxidized cytosolic environment. The superoxide-induced lipid peroxidation resulted in altered colony morphology and loss of membrane integrity in ΔRv0495c. As a consequence, ΔRv0495c demonstrated enhanced susceptibility when exposed to various host-induced stress conditions. Further, as expected, we observed a mutant-specific increase in the abundance of transcripts that encode proteins involved in antioxidant defence. Surprisingly, despite showing a growth defect phenotype in macrophages, the absence of the Rv0495c enhanced the pathogenicity and augmented the ability of the Mtb to grow inside the host. Additionally, our study revealed that Rv0495c-mediated immunomodulation by the pathogen helps create a favorable niche for long-term survival of Mtb inside the host. In summary, the current study underscores the fact that the truce in the war between the host and the pathogen favours long-term disease persistence in tuberculosis. We believe targeting Rv0495c could potentially be explored as a strategy to potentiate the current anti-TB regimen.

结核分枝杆菌(Mtb)已进化出复杂的监控机制来中和 ROS 引发的毒性,否则 ROS 会降解包括蛋白质、核酸和脂质在内的多种生物分子。在本研究中,我们发现缺乏 Rv0495c 基因的 Mtb(ΔRv0495c)呈现出高度氧化的细胞膜环境。超氧化物诱导的脂质过氧化导致ΔRv0495c菌落形态改变和膜完整性丧失。因此,ΔRv0495c 在暴露于各种宿主诱导的应激条件时表现出更强的易感性。此外,正如预期的那样,我们观察到突变体特异性地增加了编码参与抗氧化防御的蛋白质的转录本的丰度。令人惊讶的是,尽管在巨噬细胞中显示出生长缺陷表型,但 Rv0495c 的缺失增强了致病性,提高了 Mtb 在宿主体内生长的能力。此外,我们的研究还发现,病原体介导的 Rv0495c 免疫调节有助于为 Mtb 在宿主体内的长期生存创造有利的生态位。总之,目前的研究强调了这样一个事实,即宿主与病原体之间的停战有利于结核病的长期存在。我们认为,以 Rv0495c 为靶点有可能成为加强当前抗结核疗法的一种策略。
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引用次数: 0
Isoniazid exposures and acetylator status in Indonesian tuberculous meningitis patients 印度尼西亚结核性脑膜炎患者的异烟肼暴露和乙酰化酶状态
IF 3.2 3区 医学 Q3 IMMUNOLOGY Pub Date : 2023-12-21 DOI: 10.1016/j.tube.2023.102465
Vycke Yunivita , Lindsey te Brake , Sofiati Dian , Ahmad Rizal Ganiem , Reinout van Crevel , Rovina Ruslami , Rob Aarnoutse

The effect of acetylator status on the exposure to isoniazid in plasma and CSF in tuberculous meningitis (TBM) patients remains largely unexplored. Here, we describe isoniazid exposures and acetylator status of 48 subjects in the ReDEFINe study (NCT02169882). Fifty percentwere fast (half-life <130 min) or slow (half-life >130 min) acetylators. Slow acetylators had higher AUC0-24, Cmax and CSF concentrations than fast acetylators (GM AUC0-24 25.5 vs 10.6 mg/L*h, p < 0.001); plasma Cmax 5.5 vs 3.6 mg/L, p = 0.023; CSF concentration 1.9 vs 1.1 mg/L, p = 0.008). Higher isoniazid doses may benefit fast acetylators in TBM.

乙酰化酶状态对结核性脑膜炎(TBM)患者血浆和脑脊液中异烟肼暴露量的影响在很大程度上仍未得到探讨。在此,我们描述了 ReDEFINe 研究(NCT02169882)中 48 名受试者的异烟肼暴露量和乙酰化酶状态。50%的受试者是快速(半衰期为 130 分钟)或慢速(半衰期为 130 分钟)乙酰化者。与快速乙酰化者相比,慢乙酰化者的 AUC0-24、Cmax 和 CSF 浓度更高(GM AUC0-24 25.5 vs 10.6 mg/L*h,p < 0.001);血浆 Cmax 5.5 vs 3.6 mg/L,p = 0.023;CSF 浓度 1.9 vs 1.1 mg/L,p = 0.008)。较高的异烟肼剂量可能有利于TBM中的快速乙酰化者。
{"title":"Isoniazid exposures and acetylator status in Indonesian tuberculous meningitis patients","authors":"Vycke Yunivita ,&nbsp;Lindsey te Brake ,&nbsp;Sofiati Dian ,&nbsp;Ahmad Rizal Ganiem ,&nbsp;Reinout van Crevel ,&nbsp;Rovina Ruslami ,&nbsp;Rob Aarnoutse","doi":"10.1016/j.tube.2023.102465","DOIUrl":"10.1016/j.tube.2023.102465","url":null,"abstract":"<div><p><span>The effect of acetylator status on the exposure to isoniazid in plasma and CSF in tuberculous meningitis (TBM) patients remains largely unexplored. Here, we describe isoniazid exposures and acetylator status of 48 subjects in the ReDEFINe study (NCT02169882). Fifty percentwere fast (half-life &lt;130 min) or slow (half-life &gt;130 min) acetylators. Slow acetylators had higher AUC</span><sub>0-24,</sub> C<sub>max</sub> and CSF concentrations than fast acetylators (GM AUC<sub>0-24</sub> 25.5 vs 10.6 mg/L*h, p &lt; 0.001); plasma C<sub>max</sub> 5.5 vs 3.6 mg/L, p = 0.023; CSF concentration 1.9 vs 1.1 mg/L, p = 0.008). Higher isoniazid doses may benefit fast acetylators in TBM.</p></div>","PeriodicalId":23383,"journal":{"name":"Tuberculosis","volume":"144 ","pages":"Article 102465"},"PeriodicalIF":3.2,"publicationDate":"2023-12-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138825647","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Antibody response to mycobacterial Rpf B protein and its immunodominant peptides in HIV-TB co-infected individuals 艾滋病毒-结核病合并感染者对分枝杆菌 Rpf B 蛋白及其免疫优势肽的抗体反应
IF 3.2 3区 医学 Q3 IMMUNOLOGY Pub Date : 2023-12-16 DOI: 10.1016/j.tube.2023.102464
Madhur Kalyan , Sumedha Sharma , Prabhdeep Kaur , Aman Sharma , Indu Verma

Diagnosis of TB at early stages of HIV infection may lead to timely intervention for improving patient outcome. Antibodies to Mycobacterium tuberculosis recombinant RpfB protein and two immunodominant peptides of Rpf B protein were evaluated in the sera of HIV +TB+, HIV+ and HIV pulmonary TB patients by ELISA. Serum antibodies from 90 % and 65 % of HIV+TB+ patients reacted to recombinant RpfB protein and synthetic peptide RpfP1 respectively. Overall, this study shows that resuscitation promoting factor B elicits humoral antibody response in HIV+TB+ co-infected individuals and be proposed as a potential biomarker for diagnosis of HIV+TB+ patients, however further longitudinal follow up studies are warranted.

在艾滋病病毒感染的早期阶段诊断出结核病,可以及时采取干预措施,改善患者的预后。通过 ELISA 方法评估了 HIV + TB+、HIV+ 和 HIV- 肺结核患者血清中结核分枝杆菌重组 RpfB 蛋白和 Rpf B 蛋白两种免疫优势肽的抗体。90% 和 65% 的 HIV-TB 患者的血清抗体分别对重组 RpfB 蛋白和合成肽 RpfP1 起反应。总之,这项研究表明,促进复苏因子 B 可引起 HIV+TB+ 合并感染者的体液抗体反应,可作为诊断 HIV+TB+ 患者的潜在生物标志物,但还需要进一步的纵向跟踪研究。
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引用次数: 0
mRNA profiling of cytokines to understand paradoxical response in HIV-uninfected tuberculous meningitis 通过细胞因子 mRNA 图谱了解未感染艾滋病毒的结核性脑膜炎患者的矛盾反应
IF 3.2 3区 医学 Q3 IMMUNOLOGY Pub Date : 2023-12-09 DOI: 10.1016/j.tube.2023.102463
Jayantee Kalita , Ruchi Shukla , Prakash C. Pandey , Vivek Singh , Rudrashish Haldar , Usha K. Misra

Paradoxical reaction (PR) in tuberculous meningitis (TBM) is a major management issue. We report mRNA profiling of cytokines to understand PR in HIV-uninfected TBM patients. 72 patients with TBM were included, and their clinical, MRI, and mRNA profiling of tumor necrosis factor (TNF) α, interleukin (IL) 6, IL10 and interferon (IFN) γ genes in the peripheral blood mononuclear cells were done at admission and 6 weeks of antitubercular treatment. Cytokine profiling was done using reverse transcriptase polymerase chain reaction. PR was defined if repeat MRI at 6 weeks revealed new or increase in exudates, tuberculoma, hydrocephalus or infarctions. Outcome was defined at 6 months using modified Rankin Scale (mRS), and categorized as death, poor and good. 44 (61.1 %) patients had PR, and 28 (38.9 %) had paradoxical tuberculoma (PT). The expression of IL6 and TNFα genes were higher in PR and PT groups. Stage of meningitis and hydrocephalus at admission predicted PR. Patients with PR and PT had more frequently poor outcome.

About three-fifth HIV-uninfected TBM patients have PR and two-fifth have PT. Paradoxical reaction is associated with higher expression of IL6 and TNFα. Patients with severe meningitis with hydrocephalus develop PR more frequently.

结核性脑膜炎(TBM)中的变态反应(PR)是一个重要的管理问题。我们报告了细胞因子的 mRNA 图谱,以了解未感染 HIV 的 TBM 患者的 PR 情况。我们纳入了 72 名 TBM 患者,在入院时和抗结核治疗 6 周后对他们的临床、磁共振成像以及外周血单核细胞中肿瘤坏死因子 (TNF) α、白细胞介素 (IL) 6、IL10 和干扰素 (IFN) γ 基因的 mRNA 图谱进行了分析。细胞因子分析采用逆转录酶聚合酶链反应法进行。如果 6 周后重复磁共振成像发现渗出物、结核瘤、脑积水或梗死新的或增加,则定义为 PR。6 个月后的预后采用改良兰金量表(mRS)进行定义,分为死亡、不良和良好。44例(61.1%)患者患有PR,28例(38.9%)患者患有矛盾性结核瘤(PT)。PR 组和 PT 组的 IL6 和 TNFα 基因表达量较高。入院时脑膜炎和脑积水的分期预示着 PR 的发生。约五分之三的未感染艾滋病毒的 TBM 患者有 PR,五分之二的患者有 PT。副反应与 IL6 和 TNFα 的高表达有关。伴有脑积水的重症脑膜炎患者更常出现 PR。
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引用次数: 0
Integrative and comparative genomic analyses of mammalian macrophage responses to intracellular mycobacterial pathogens 哺乳动物巨噬细胞对细胞内分枝杆菌病原体反应的综合和比较基因组分析
IF 3.2 3区 医学 Q3 IMMUNOLOGY Pub Date : 2023-12-02 DOI: 10.1016/j.tube.2023.102453
Thomas J. Hall , Gillian P. McHugo , Michael P. Mullen , James A. Ward , Kate E. Killick , John A. Browne , Stephen V. Gordon , David E. MacHugh

Mycobacterium tuberculosis, the causative agent of human tuberculosis (hTB), is a close evolutionary relative of Mycobacterium bovis, which causes bovine tuberculosis (bTB), one of the most damaging infectious diseases to livestock agriculture. Previous studies have shown that the pathogenesis of bTB disease is comparable to hTB disease, and that the bovine and human alveolar macrophage (bAM and hAM, respectively) transcriptomes are extensively reprogrammed in response to infection with these intracellular mycobacterial pathogens. In this study, a multi-omics integrative approach was applied with functional genomics and GWAS data sets across the two primary hosts (Bos taurus and Homo sapiens) and both pathogens (M. bovis and M. tuberculosis). Four different experimental infection groups were used: 1) bAM infected with M. bovis, 2) bAM infected with M. tuberculosis, 3) hAM infected with M. tuberculosis, and 4) human monocyte-derived macrophages (hMDM) infected with M. tuberculosis. RNA-seq data from these experiments 24 h post-infection (24 hpi) was analysed using three computational pipelines: 1) differentially expressed genes, 2) differential gene expression interaction networks, and 3) combined pathway analysis. The results were integrated with high-resolution bovine and human GWAS data sets to detect novel quantitative trait loci (QTLs) for resistance to mycobacterial infection and resilience to disease. This revealed common and unique response macrophage pathways for both pathogens and identified 32 genes (12 bovine and 20 human) significantly enriched for SNPs associated with disease resistance, the majority of which encode key components of the NF-κB signalling pathway and that also drive formation of the granuloma.

结核分枝杆菌是人类结核病(hTB)的病原体,是牛分枝杆菌的近亲,牛分枝杆菌引起牛结核病(bTB),这是对畜牧业最具破坏性的传染病之一。先前的研究表明,bTB疾病的发病机制与hTB疾病相当,牛和人肺泡巨噬细胞(分别为bAM和hAM)的转录组在响应这些细胞内分枝杆菌病原体的感染时被广泛重编程。在这项研究中,采用多组学整合方法,对两个主要宿主(牛分枝杆菌和智人)和两个病原体(牛分枝杆菌和结核分枝杆菌)的功能基因组学和GWAS数据集进行了研究。采用4个不同的实验感染组:1)bAM感染牛分枝杆菌,2)bAM感染结核分枝杆菌,3)hAM感染结核分枝杆菌,4)人单核细胞源性巨噬细胞(hMDM)感染结核分枝杆菌。这些实验在感染后24 h (24 hpi)的RNA-seq数据使用三个计算管道进行分析:1)差异表达基因,2)差异基因表达相互作用网络,3)联合途径分析。结果与高分辨率牛和人GWAS数据集相结合,以检测分枝杆菌感染抗性和疾病恢复力的新数量性状位点(qtl)。这揭示了两种病原体的共同和独特的巨噬细胞反应途径,并鉴定出32个基因(12个牛和20个人)显著富集与疾病抗性相关的snp,其中大多数基因编码NF-κB信号通路的关键组分,也驱动肉芽肿的形成。
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引用次数: 0
Combined cerebrospinal fluid metabolomic and cytokine profiling in tuberculosis meningitis reveals robust and prolonged changes in immunometabolic networks 结核性脑膜炎的脑脊液代谢组学和细胞因子综合分析揭示了免疫代谢网络的强劲和长期变化
IF 3.2 3区 医学 Q3 IMMUNOLOGY Pub Date : 2023-12-02 DOI: 10.1016/j.tube.2023.102462
Jeffrey Tomalka , Ashish Sharma , Alison G.C. Smith , Teona Avaliani , Mariam Gujabidze , Tinatin Bakuradze , Shorena Sabanadze , Dean P. Jones , Zaza Avaliani , Maia Kipiani , Russell R. Kempker , Jeffrey M. Collins

Much of the high mortality in tuberculosis meningitis (TBM) is attributable to excessive inflammation, making it imperative to identify targets for host-directed therapies that reduce pathologic inflammation and mortality. In this study, we investigate how cytokines and metabolites in the cerebral spinal fluid (CSF) associate with TBM at diagnosis and during TBM treatment. At diagnosis, TBM patients (n = 17) demonstrate significant increases of cytokines and chemokines that promote inflammation and cell migration including IL-17A, IL-2, TNFα, IFNγ, and IL-1β versus asymptomatic controls without known central nervous system pathology (n = 20). Inflammatory immune signaling had a strong positive correlation with immunomodulatory metabolites including kynurenine, lactic acid, and carnitine and strong negative correlations with tryptophan and itaconate. Inflammatory immunometabolic networks were only partially reversed with two months of effective TBM treatment and remained significantly different compared to CSF from controls. Together, these data highlight a critical role for host metabolism in regulating the inflammatory response to TBM and indicate the timeline for restoration of immune homeostasis in the CSF is prolonged.

结核性脑膜炎(TBM)的高死亡率在很大程度上可归因于过度炎症,因此有必要确定宿主导向治疗的靶点,以减少病理性炎症和死亡率。在这项研究中,我们研究了脑脊液(CSF)中的细胞因子和代谢物在诊断和治疗期间与TBM的关系。在诊断时,TBM患者(n = 17)与没有已知中枢神经系统病理的无症状对照(n = 20)相比,显示出促进炎症和细胞迁移的细胞因子和趋化因子显著增加,包括IL-17A、IL-2、TNFα、IFNγ和IL-1β。炎症免疫信号与免疫调节代谢物(包括犬尿氨酸、乳酸和肉碱)有很强的正相关,与色氨酸和衣康酸有很强的负相关。经过两个月有效的TBM治疗,炎症免疫代谢网络仅部分逆转,与对照组相比仍有显著差异。总之,这些数据突出了宿主代谢在调节TBM炎症反应中的关键作用,并表明脑脊液中免疫稳态恢复的时间延长。
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引用次数: 0
Proteome and immunogenicity differences in BCG Pasteur ATCC 35734 and its derivative, the vaccine candidate BCGΔBCG1419c during planktonic growth in 7H9 and Proskauer Beck media BCG Pasteur ATCC 35734及其衍生物(候选疫苗BCGΔBCG1419c)在7H9和Proskauer Beck培养基浮游生长过程中的蛋白质组学和免疫原性差异
IF 3.2 3区 医学 Q3 IMMUNOLOGY Pub Date : 2023-11-28 DOI: 10.1016/j.tube.2023.102432
Mario Alberto Flores-Valdez , Jesús Bernardino Velázquez-Fernández , César Pedroza-Roldán , Michel de Jesús Aceves-Sánchez , Abel Gutiérrez-Ortega , Wendy López-Romero , Jeannette Barba-León , Jacobo Rodríguez-Campos

Bacillus Calmette–Guérin (BCG) remains as the only vaccine employed to prevent tuberculosis (TB) during childhood. Among factors likely contributing to the variable efficacy of BCG is the variation in its antigenic repertoire that may arise from in vitro growth conditions. Our vaccine candidate, BCGΔBCG1419c, improved protection against TB in mice and guinea pigs with bacteria grown in either 7H9 OADC Tween 80 and in Proskauer Beck Tween 80 media in independent studies. Here, we compared the proteomes of planktonic cultures of BCG and BCGΔBCG1419c, grown in both media. Further to this, we compared systemic immunogenicity ex vivo elicited by both types of BCG strains and cultures when used to vaccinate BALB/c mice. Both the parental strain BCG Pasteur ATCC 35734, and its isogenic mutant BCGΔBCG1419c, had several medium-dependent changes. Moreover, ex vivo immune responses to a multiantigenic (PPD) or a single antigenic (Ag85A) stimulus were also medium-dependent. Then, not only the presence or absence of the BCG1419c gene in our strains under study affected the proteome produced in vitro but also that this was affected by culture medium, potentially leading to changes in the capacity to induce ex vivo immune responses.

卡介苗(BCG)仍然是儿童时期预防结核病的唯一疫苗。可能导致卡介苗疗效变化的因素之一是其抗原库的变化,这可能源于体外生长条件。我们的候选疫苗BCGΔBCG1419c在独立研究中,通过在7H9 OADC Tween 80和Proskauer Beck Tween 80培养基中培养的细菌,提高了小鼠和豚鼠对结核病的保护作用。在这里,我们比较了在两种培养基中生长的BCG和BCGΔBCG1419c浮游培养物的蛋白质组。此外,我们比较了两种类型的卡介苗菌株和培养物在体外引起的全身免疫原性,用于接种BALB/c小鼠。亲本菌株BCG Pasteur ATCC 35734及其等基因突变株BCGΔBCG1419c都有几种介质依赖性变化。此外,对多抗原(PPD)或单抗原(Ag85A)刺激的体外免疫反应也是中等依赖的。因此,在我们研究的菌株中,BCG1419c基因的存在与否不仅会影响体外产生的蛋白质组,还会受到培养基的影响,从而可能导致诱导体外免疫反应的能力发生变化。
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Tuberculosis
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