首页 > 最新文献

Vibrational Spectroscopy最新文献

英文 中文
Real-time monitoring of CBDA decarboxylation in solid state and cannabis flowers using mid infrared spectroscopy coupled with multivariate analysis 利用中红外光谱和多元分析对固态和大麻花中的 CBDA 脱羧过程进行实时监测
IF 2.7 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-09-01 DOI: 10.1016/j.vibspec.2024.103728
Olga Gigopulu , Nikola Geskovski , Gjoshe Stefkov , Ana Poceva Panovska , Marjan Piponski , Irena Slaveska Spirevska , Petre Makreski

Cannabidiolic acid (CBDA) is found in cannabis as genuine phytocompound of the well-known non-psychoactive cannabinoid - cannabidiol (CBD), notable for its various therapeutic purposes. Decarboxylation of CBDA to CBD is commonly used in the production of finished cannabis products, thus increasing its bioavailability, and making it more effective for various therapeutic purposes. Optimization of decarboxylation time and the possibility of monitoring this process in real-time is quite a challenge for the cannabis producers' R&D divisions, since incomplete decarboxylation is associated with quality and efficiency concerns, whereas prolonged reaction time can lead to potentially lower production efficacy. The purpose of this study is to emphasize the use of mid-infrared (MIR) spectroscopy for in-situ real-time monitoring and understanding of the CBDA decarboxylation process. For the first time, the TG/DTG curves of CBDA provided insights into the solid-solid decarboxylation dynamics, process endpoint, and maximal conversion rate temperature, which were used for designing the subsequent infrared experiments. In addition, the DSC curve illustrated the melting point of the pure CBDA. Temperature-controlled infrared spectroscopy studies were performed on CBDA standard and cannabis flowers followed by precise band assignment and spectra-structure correlations based on the idea of functional group vibrations. In order to investigate the spectral regions of major relevance for the CBDA to CBD interconversion process, a principal component analysis (PCA) was used. In the obtained models, PC1 was capable to describe 81.3 %, 77.8 % and 77 % of the total spectral fluctuations in the CBDA standard and two plant samples, respectively. The PC1 score plot of the CBDA standard (as a function of temperature) showed a perfect complementarity to the TG/DTG curve, indicating that PC1 of the MIR spectrum model may quantitatively describe the CBDA decarboxylation dynamics, which allowed for the derivation of decarboxylation rate constants for the CBDA standard and the plant material at prechosen temperatures. The temperature-controlled experiments revealed significantly higher kinetics constants of CBDA decarboxylation in the plant material compared to the CBDA standard and supported the assumption that the complex matrix in cannabis plants accelerates the conversion of CBDA to CBD. In this way, progress in the development and optimization of an efficient and fast approach for monitoring and elucidation of the phytocannabinoid decarboxylation process was made, launching the possibility for further employment in the medical cannabis industry.

大麻二酚酸(CBDA)作为众所周知的非精神活性大麻素--大麻二酚(CBD)的真正植物化合物存在于大麻中,因其各种治疗用途而闻名。将 CBDA 脱羧成 CBD 通常用于生产大麻成品,从而提高其生物利用率,使其更有效地用于各种治疗目的。对于大麻生产商的研发部门来说,优化脱羧时间和实时监控这一过程的可能性是一个相当大的挑战,因为不完全脱羧会带来质量和效率问题,而反应时间过长则可能导致生产效率降低。本研究旨在强调使用中红外(MIR)光谱对 CBDA 的脱羧过程进行原位实时监测和了解。CBDA 的 TG/DTG 曲线首次揭示了固-固脱羧动态、过程终点和最大转化率温度,并用于设计后续的红外实验。此外,DSC 曲线还显示了纯 CBDA 的熔点。对 CBDA 标准品和大麻花进行了温控红外光谱研究,然后根据官能团振动的思想进行了精确的波段分配和光谱-结构相关性分析。为了研究 CBDA 与 CBD 相互转化过程中的主要相关光谱区域,采用了主成分分析法(PCA)。在获得的模型中,PC1 能够描述的光谱波动分别占 CBDA 标准样品和两种植物样品光谱波动总量的 81.3%、77.8% 和 77%。CBDA 标准物质的 PC1 分值图(与温度的函数关系)与 TG/DTG 曲线显示出完美的互补性,表明近红外光谱模型的 PC1 可以定量描述 CBDA 的脱羧动态,从而推导出 CBDA 标准物质和植物材料在预选温度下的脱羧速率常数。温控实验显示,与 CBDA 标准物质相比,植物材料中 CBDA 的脱羧动力学常数明显更高,这也支持了大麻植物中的复杂基质会加速 CBDA 向 CBD 转化的假设。因此,在开发和优化用于监测和阐明植物大麻素脱羧过程的高效快速方法方面取得了进展,为进一步应用于医用大麻行业提供了可能。
{"title":"Real-time monitoring of CBDA decarboxylation in solid state and cannabis flowers using mid infrared spectroscopy coupled with multivariate analysis","authors":"Olga Gigopulu ,&nbsp;Nikola Geskovski ,&nbsp;Gjoshe Stefkov ,&nbsp;Ana Poceva Panovska ,&nbsp;Marjan Piponski ,&nbsp;Irena Slaveska Spirevska ,&nbsp;Petre Makreski","doi":"10.1016/j.vibspec.2024.103728","DOIUrl":"10.1016/j.vibspec.2024.103728","url":null,"abstract":"<div><p>Cannabidiolic acid (CBDA) is found in cannabis as genuine phytocompound of the well-known non-psychoactive cannabinoid - cannabidiol (CBD), notable for its various therapeutic purposes. Decarboxylation of CBDA to CBD is commonly used in the production of finished cannabis products, thus increasing its bioavailability, and making it more effective for various therapeutic purposes. Optimization of decarboxylation time and the possibility of monitoring this process in real-time is quite a challenge for the cannabis producers' R&amp;D divisions, since incomplete decarboxylation is associated with quality and efficiency concerns, whereas prolonged reaction time can lead to potentially lower production efficacy. The purpose of this study is to emphasize the use of mid-infrared (MIR) spectroscopy for <em>in-situ</em> real-time monitoring and understanding of the CBDA decarboxylation process. For the first time, the TG/DTG curves of CBDA provided insights into the solid-solid decarboxylation dynamics, process endpoint, and maximal conversion rate temperature, which were used for designing the subsequent infrared experiments. In addition, the DSC curve illustrated the melting point of the pure CBDA. Temperature-controlled infrared spectroscopy studies were performed on CBDA standard and cannabis flowers followed by precise band assignment and spectra-structure correlations based on the idea of functional group vibrations. In order to investigate the spectral regions of major relevance for the CBDA to CBD interconversion process, a principal component analysis (PCA) was used. In the obtained models, PC1 was capable to describe 81.3 %, 77.8 % and 77 % of the total spectral fluctuations in the CBDA standard and two plant samples, respectively. The PC1 score plot of the CBDA standard (as a function of temperature) showed a perfect complementarity to the TG/DTG curve, indicating that PC1 of the MIR spectrum model may quantitatively describe the CBDA decarboxylation dynamics, which allowed for the derivation of decarboxylation rate constants for the CBDA standard and the plant material at prechosen temperatures. The temperature-controlled experiments revealed significantly higher kinetics constants of CBDA decarboxylation in the plant material compared to the CBDA standard and supported the assumption that the complex matrix in cannabis plants accelerates the conversion of CBDA to CBD. In this way, progress in the development and optimization of an efficient and fast approach for monitoring and elucidation of the phytocannabinoid decarboxylation process was made, launching the possibility for further employment in the medical cannabis industry.</p></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"134 ","pages":"Article 103728"},"PeriodicalIF":2.7,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142151806","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Pedotransfer functions development for modeling FC and PWP using Vis-NIR spectra combined with PLSR and regression models 利用可见光-近红外光谱与 PLSR 和回归模型相结合,开发用于模拟 FC 和 PWP 的 Pedotransfer 函数
IF 2.7 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-08-28 DOI: 10.1016/j.vibspec.2024.103731
Xizhen Zhu , Piaoyun Gu , Gang Wu

The utilization of the soil pedotransfer functions (PTFs) developed based on the basic soil propertied is an alternative, fast, cost-effective and applicable approach for the prediction of field capacity (FC) and permanent wilting point (PWP). In addition, the Visible–Near-Infrared (Vis-NIR) spectra in soil science has gained prominence due to its practicality and relevance. In this paper, we used the data of the soil PWP and FC of 135 soil samples, easily measurable soil properties and Vis-NIR spectroscopy. The multiple linear regression (MLR) model was utilized to formulate PTFs model and Vis-NIR spectroscopy combined with MLR and partial least-squares (PLSR) was used to develop Spectrotransfer Function (STF). Results showed that among the easily measurable soil properties, particle-size diameter (dg) with Beta of −0.72 and −0.63 the most influential parameters for predicting FC and PWP, respectively, followed by the clay content. Developed PTFs for both FC and PWP with a R2 of 0.71 and 0.68, respectively, had a better performance than other previous developed PTFs. Results also revealed that the PLSR with a higher R2 (0.81) and lower RMSE (4 %) significantly performed better in comparison to STF for both FC and PWP prediction.

利用基于基本土壤特性开发的土壤传粉函数 (PTF),是预测田间容重 (FC) 和永久枯萎点 (PWP) 的另一种快速、经济、适用的方法。此外,可见光-近红外(Vis-NIR)光谱因其实用性和相关性在土壤科学中的地位日益突出。本文利用 135 个土壤样本的土壤脉动温升(PWP)和耐旱性(FC)数据、易于测量的土壤特性和可见-近红外光谱。利用多元线性回归(MLR)模型建立了 PTFs 模型,并利用可见近红外光谱仪结合 MLR 和偏最小二乘法(PLSR)建立了光谱转移函数(STF)。结果表明,在易于测量的土壤特性中,粒径(dg)是对预测 FC 和 PWP 影响最大的参数,其 Beta 值分别为-0.72 和-0.63,其次是粘土含量。针对 FC 和 PWP 开发的 PTF 的 R2 分别为 0.71 和 0.68,其性能优于之前开发的其他 PTF。结果还显示,与 STF 相比,R2(0.81)更高、RMSE(4%)更低的 PLSR 在 FC 和 PWP 预测方面的性能明显更好。
{"title":"Pedotransfer functions development for modeling FC and PWP using Vis-NIR spectra combined with PLSR and regression models","authors":"Xizhen Zhu ,&nbsp;Piaoyun Gu ,&nbsp;Gang Wu","doi":"10.1016/j.vibspec.2024.103731","DOIUrl":"10.1016/j.vibspec.2024.103731","url":null,"abstract":"<div><p>The utilization of the soil pedotransfer functions (PTFs) developed based on the basic soil propertied is an alternative, fast, cost-effective and applicable approach for the prediction of field capacity (FC) and permanent wilting point (PWP). In addition, the Visible–Near-Infrared (Vis-NIR) spectra in soil science has gained prominence due to its practicality and relevance. In this paper, we used the data of the soil PWP and FC of 135 soil samples, easily measurable soil properties and Vis-NIR spectroscopy. The multiple linear regression (MLR) model was utilized to formulate PTFs model and Vis-NIR spectroscopy combined with MLR and partial least-squares (PLSR) was used to develop Spectrotransfer Function (STF). Results showed that among the easily measurable soil properties, particle-size diameter (dg) with Beta of −0.72 and −0.63 the most influential parameters for predicting FC and PWP, respectively, followed by the clay content. Developed PTFs for both FC and PWP with a R<sup>2</sup> of 0.71 and 0.68, respectively, had a better performance than other previous developed PTFs. Results also revealed that the PLSR with a higher R<sup>2</sup> (0.81) and lower RMSE (4 %) significantly performed better in comparison to STF for both FC and PWP prediction.</p></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"135 ","pages":"Article 103731"},"PeriodicalIF":2.7,"publicationDate":"2024-08-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142171573","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Correlative morphological, elemental and chemical phase analyses at the micrometric scale of powdered materials: Application to nuclear forensics 对粉末状材料进行微米尺度的形态、元素和化学相位关联分析:核鉴识应用
IF 2.7 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-08-24 DOI: 10.1016/j.vibspec.2024.103729
Fabien Pointurier, Faustine Berthy, Olivier Marie

To characterize a mixture of powders using several analytical techniques, it is necessary that successive analyses be carried out on well-identified and localized particles, so that each characterization corresponds to a given powder. In this publication, powdered nuclear materials are characterized at the morphological and elemental levels with a scanning electron microscope (SEM) equipped with an energy dispersive X-ray spectrometer (EDS) and at the chemical level with a micro-Raman spectrometer (MRS). However, to avoid a time-consuming and insufficiently accurate microparticle relocation process between SEM/EDS and MRS, micro-Raman analyses are carried out inside the SEM using a coupling device. In this way, all three pieces of information are obtained for exactly the same micrometric spot, without moving the sample or relocating the microparticles analyzed. The information can therefore be combined to characterize each component of the mixture. In this article, we describe in detail the methodology we have developed and optimized for morphological, elemental and chemical analysis of microparticles using a combined SEM/EDS and SRM. This methodology has been applied to powdered nuclear materials in two international nuclear forensics exercises. In the first exercise, named CMX-6, the combined use of the two instruments identified the presence of PuO2 microparticles and several uranium compounds (UO2, U3O8, UO2F2) in both materials. In the second exercise, called CMX-7, the methodology developed enabled us to distinguish two chemical phases of uranium, a uranyl oxy-hydroxide and a uranyl nitrate, each characterized by specific morphologies and the detection or non-detection of a minor elemental constituent (calcium).

要使用多种分析技术对粉末混合物进行表征,就必须对明确识别和定位的颗粒进行连续分析,以便每次表征都与特定粉末相对应。在本出版物中,使用配备了能量色散 X 射线光谱仪(EDS)的扫描电子显微镜(SEM)和微拉曼光谱仪(MRS)对粉末状核材料进行了形态和元素层面的表征。不过,为了避免在 SEM/EDS 和 MRS 之间进行耗时且不够精确的微粒子重新定位过程,微拉曼分析是在 SEM 内部使用耦合装置进行的。这样,在不移动样品或重新定位所分析的微颗粒的情况下,就能获得完全相同的微米点的所有三种信息。因此,可以将这些信息结合起来,对混合物中的每种成分进行表征。在本文中,我们将详细介绍我们开发并优化的方法,该方法可使用 SEM/EDS 和 SRM 组合对微粒进行形态、元素和化学分析。该方法已在两次国际核鉴识演习中应用于粉末状核材料。在名为 CMX-6 的第一次演习中,两种仪器的联合使用确定了两种材料中都存在二氧化铀微粒和几种铀化合物(UO2、U3O8、UO2F2)。在名为 CMX-7 的第二项研究中,所开发的方法使我们能够区分铀的两种化学相,一种是铀酰氧氢氧化物,另一种是铀酰硝酸盐,每种化学相都具有特定的形态特征,并可检测到或检测不到一种次要元素成分(钙)。
{"title":"Correlative morphological, elemental and chemical phase analyses at the micrometric scale of powdered materials: Application to nuclear forensics","authors":"Fabien Pointurier,&nbsp;Faustine Berthy,&nbsp;Olivier Marie","doi":"10.1016/j.vibspec.2024.103729","DOIUrl":"10.1016/j.vibspec.2024.103729","url":null,"abstract":"<div><p>To characterize a mixture of powders using several analytical techniques, it is necessary that successive analyses be carried out on well-identified and localized particles, so that each characterization corresponds to a given powder. In this publication, powdered nuclear materials are characterized at the morphological and elemental levels with a scanning electron microscope (SEM) equipped with an energy dispersive X-ray spectrometer (EDS) and at the chemical level with a micro-Raman spectrometer (MRS). However, to avoid a time-consuming and insufficiently accurate microparticle relocation process between SEM/EDS and MRS, micro-Raman analyses are carried out inside the SEM using a coupling device. In this way, all three pieces of information are obtained for exactly the same micrometric spot, without moving the sample or relocating the microparticles analyzed. The information can therefore be combined to characterize each component of the mixture. In this article, we describe in detail the methodology we have developed and optimized for morphological, elemental and chemical analysis of microparticles using a combined SEM/EDS and SRM. This methodology has been applied to powdered nuclear materials in two international nuclear forensics exercises. In the first exercise, named CMX-6, the combined use of the two instruments identified the presence of PuO<sub>2</sub> microparticles and several uranium compounds (UO<sub>2</sub>, U<sub>3</sub>O<sub>8</sub>, UO<sub>2</sub>F<sub>2</sub>) in both materials. In the second exercise, called CMX-7, the methodology developed enabled us to distinguish two chemical phases of uranium, a uranyl oxy-hydroxide and a uranyl nitrate, each characterized by specific morphologies and the detection or non-detection of a minor elemental constituent (calcium).</p></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"134 ","pages":"Article 103729"},"PeriodicalIF":2.7,"publicationDate":"2024-08-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142089117","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
On the shape of the simulated infrared spectral density of strongly hydrogen-bonded systems: Mapping and identification of Hadži ABC structure in phosphonic acid dimers in gas phase 论强氢键体系模拟红外光谱密度的形状气相膦酸二聚体中哈德兹 ABC 结构的映射与识别
IF 2.7 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-08-21 DOI: 10.1016/j.vibspec.2024.103730
Najeh Rekik
<div><p>Herein, we explore the origin of three-peaked structure, referred to as the Hadži ABC structure, illustrated within the absorption bands in infrared (IR) spectra of strongly H-bonded systems. The exploration is particularly elucidated for two phosphinic acid dimers (<em>R</em><sub>2</sub><em>POOH</em>) in gas phase, namely bis-(iodomethyl)-phosphinic acid dimer (i.e., <em>R</em> = <em>CH</em><sub>2</sub><em>I</em>) at 465 K and dibutyl-phosphinic acid dimer (i.e., <em>R</em> = <em>C</em><sub>4</sub><em>H</em><sub>9</sub><em>O</em>) at 425 K. A direct theoretical illustration of this spectral signature, related predominantly to very strongly hydrogen bonded complexes, is proposed. The spectral density, <span><math><mrow><msub><mrow><mi>υ</mi></mrow><mrow><mi>S</mi></mrow></msub><mfenced><mrow><mi>O</mi><mo>−</mo><mi>H</mi></mrow></mfenced></mrow></math></span>,is determined by the aid of an approach describing the high-frequency <em>O</em> − <em>H</em> stretching modes by harmonic potentials. The intermolecular potential modes (<em>O</em>…<em>O</em>) are assumed to be of anharmonic nature. The approach is founded on the strong anharmonic coupling approximation, which prescribes a linear dependency of the <em>O</em> − <em>H</em> frequency on the <em>O</em>…<em>O</em> stretching coordinate as rationalized by the fundamental model of Maréchal and Witkowski. Both direct relaxation of the <em>O</em> − <em>H</em> vibrational mode and its homolog, indirect one, affecting the <em>O</em>…<em>O</em> stretching mode are taken into consideration. The model also considers Davydov coupling, which describes the mutual interaction that takes place in the centrosymmetric dimer between the two existent hydrogen bonds as well as Fermi resonances, which occur between the bending modes arising in- and out-of-plane of the dimer and the fundamental <em>O</em> − <em>H</em> stretching mode. Interestingly, we illustrate how the (<em>A</em>, <em>B</em>, and <em>C</em>) triplet detected in the IR absorption band of phosphonic acids can be generated and discuss how the ABC structure can be numerically simulated. The approach provides a direct explanation of the emergence of this unusual feature and mainly reveals that the <em>A</em> peak is due to the Davydov coupling mechanism, whereas the <em>BC</em> diad is found to be generated by Fermi resonances. This was elucidated in a distinctly different approach, rationalized by Sheppard and Claydon, affirming that the provenance of the <em>BC</em> diad is exclusively due to Fermi resonances mechanism. Altogether, our results highlight the congregated effects of both Fermi resonance mechanism and Davydov coupling for the formation of the <em>ABC</em> structure. The model paves the way for a deeper understanding of the <em>ABC</em> structure, characteristic of very toxic strongly hydrogen-bonded dimers. This is of capital importance as it allows one to develop a solid understanding of nerve agents, such as phosphonic acids,
在此,我们探讨了强氢键体系红外光谱吸收带中的三峰结构(即哈德日 ABC 结构)的起源。该研究特别阐明了气相中的两种膦酸二聚体(R2POOH),即 465 K 时的双-(碘甲基)-膦酸二聚体(即 R = CH2I)和 425 K 时的二丁基-膦酸二聚体(即 R = C4H9O)。这种光谱特征主要与氢键非常强的复合物有关,我们提出了一种直接的理论说明。光谱密度 υSO-H 是通过谐波势描述高频 O - H 伸展模式的方法确定的。分子间势模(O...O)被假定为非谐波性质。这种方法建立在强非谐耦合近似的基础上,它规定了 O - H 频率与 O...O 伸展坐标的线性关系,正如 Maréchal 和 Witkowski 的基本模型所合理解释的那样。O - H 振动模式的直接弛豫和影响 O...O 伸展模式的同源间接弛豫都被考虑在内。该模型还考虑了戴维多夫耦合(Davydov coupling),它描述了中心对称二聚体中存在的两个氢键之间的相互影响,以及费米共振(发生在二聚体平面内外的弯曲模式和基本 O - H 拉伸模式之间)。有趣的是,我们说明了在膦酸的红外吸收带中检测到的(A、B 和 C)三重如何产生,并讨论了如何对 ABC 结构进行数值模拟。该方法直接解释了这一不寻常特征的出现,并主要揭示了 A 峰是由于达维多夫耦合机制产生的,而 BC 二重是由费米共振产生的。Sheppard 和 Claydon 用一种截然不同的方法阐明了这一点,并确认 BC 二重性的来源完全是费米共振机制。总之,我们的研究结果凸显了费米共振机制和达维多夫耦合对 ABC 结构形成的共同影响。该模型为深入理解具有剧毒强氢键二聚体特征的 ABC 结构铺平了道路。这一点非常重要,因为它可以让人们仅从理论上就对神经毒剂(如膦酸)有扎实的了解,从而避免进行困难和危险的实验,因为它们具有剧毒。
{"title":"On the shape of the simulated infrared spectral density of strongly hydrogen-bonded systems: Mapping and identification of Hadži ABC structure in phosphonic acid dimers in gas phase","authors":"Najeh Rekik","doi":"10.1016/j.vibspec.2024.103730","DOIUrl":"10.1016/j.vibspec.2024.103730","url":null,"abstract":"&lt;div&gt;&lt;p&gt;Herein, we explore the origin of three-peaked structure, referred to as the Hadži ABC structure, illustrated within the absorption bands in infrared (IR) spectra of strongly H-bonded systems. The exploration is particularly elucidated for two phosphinic acid dimers (&lt;em&gt;R&lt;/em&gt;&lt;sub&gt;2&lt;/sub&gt;&lt;em&gt;POOH&lt;/em&gt;) in gas phase, namely bis-(iodomethyl)-phosphinic acid dimer (i.e., &lt;em&gt;R&lt;/em&gt; = &lt;em&gt;CH&lt;/em&gt;&lt;sub&gt;2&lt;/sub&gt;&lt;em&gt;I&lt;/em&gt;) at 465 K and dibutyl-phosphinic acid dimer (i.e., &lt;em&gt;R&lt;/em&gt; = &lt;em&gt;C&lt;/em&gt;&lt;sub&gt;4&lt;/sub&gt;&lt;em&gt;H&lt;/em&gt;&lt;sub&gt;9&lt;/sub&gt;&lt;em&gt;O&lt;/em&gt;) at 425 K. A direct theoretical illustration of this spectral signature, related predominantly to very strongly hydrogen bonded complexes, is proposed. The spectral density, &lt;span&gt;&lt;math&gt;&lt;mrow&gt;&lt;msub&gt;&lt;mrow&gt;&lt;mi&gt;υ&lt;/mi&gt;&lt;/mrow&gt;&lt;mrow&gt;&lt;mi&gt;S&lt;/mi&gt;&lt;/mrow&gt;&lt;/msub&gt;&lt;mfenced&gt;&lt;mrow&gt;&lt;mi&gt;O&lt;/mi&gt;&lt;mo&gt;−&lt;/mo&gt;&lt;mi&gt;H&lt;/mi&gt;&lt;/mrow&gt;&lt;/mfenced&gt;&lt;/mrow&gt;&lt;/math&gt;&lt;/span&gt;,is determined by the aid of an approach describing the high-frequency &lt;em&gt;O&lt;/em&gt; − &lt;em&gt;H&lt;/em&gt; stretching modes by harmonic potentials. The intermolecular potential modes (&lt;em&gt;O&lt;/em&gt;…&lt;em&gt;O&lt;/em&gt;) are assumed to be of anharmonic nature. The approach is founded on the strong anharmonic coupling approximation, which prescribes a linear dependency of the &lt;em&gt;O&lt;/em&gt; − &lt;em&gt;H&lt;/em&gt; frequency on the &lt;em&gt;O&lt;/em&gt;…&lt;em&gt;O&lt;/em&gt; stretching coordinate as rationalized by the fundamental model of Maréchal and Witkowski. Both direct relaxation of the &lt;em&gt;O&lt;/em&gt; − &lt;em&gt;H&lt;/em&gt; vibrational mode and its homolog, indirect one, affecting the &lt;em&gt;O&lt;/em&gt;…&lt;em&gt;O&lt;/em&gt; stretching mode are taken into consideration. The model also considers Davydov coupling, which describes the mutual interaction that takes place in the centrosymmetric dimer between the two existent hydrogen bonds as well as Fermi resonances, which occur between the bending modes arising in- and out-of-plane of the dimer and the fundamental &lt;em&gt;O&lt;/em&gt; − &lt;em&gt;H&lt;/em&gt; stretching mode. Interestingly, we illustrate how the (&lt;em&gt;A&lt;/em&gt;, &lt;em&gt;B&lt;/em&gt;, and &lt;em&gt;C&lt;/em&gt;) triplet detected in the IR absorption band of phosphonic acids can be generated and discuss how the ABC structure can be numerically simulated. The approach provides a direct explanation of the emergence of this unusual feature and mainly reveals that the &lt;em&gt;A&lt;/em&gt; peak is due to the Davydov coupling mechanism, whereas the &lt;em&gt;BC&lt;/em&gt; diad is found to be generated by Fermi resonances. This was elucidated in a distinctly different approach, rationalized by Sheppard and Claydon, affirming that the provenance of the &lt;em&gt;BC&lt;/em&gt; diad is exclusively due to Fermi resonances mechanism. Altogether, our results highlight the congregated effects of both Fermi resonance mechanism and Davydov coupling for the formation of the &lt;em&gt;ABC&lt;/em&gt; structure. The model paves the way for a deeper understanding of the &lt;em&gt;ABC&lt;/em&gt; structure, characteristic of very toxic strongly hydrogen-bonded dimers. This is of capital importance as it allows one to develop a solid understanding of nerve agents, such as phosphonic acids, ","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"134 ","pages":"Article 103730"},"PeriodicalIF":2.7,"publicationDate":"2024-08-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142021451","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A comprehensive and innovative chemometric approach: Archaeometric analysis of the sherds from the Neolithic Period to the Chalcolithic and early Bronze Age with the full deployment of FTIR's molecular spectroscopic capabilities 全面创新的化学计量学方法:充分发挥傅立叶变换红外光谱仪的分子光谱能力,对新石器时代到夏石器时代和早期青铜时代的残片进行考古计量分析
IF 2.7 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-07-24 DOI: 10.1016/j.vibspec.2024.103727
İsmail Tarhan , Zafer Derin , Berfin Çelik , Melek Öner , Şahin Menteşe

In this study, the mineralogical composition of 284 sherds obtained from the sites of Yeşilova Höyük and Yassıtepe Höyük, two of the oldest settlements in Western Anatolia, and corresponding to a wide period starting from the Neolithic period to the Chalcolithic and Early Bronze Age (EBA), was studied by attenuated total reflectance (ATR) Fourier transform infrared (FTIR) spectroscopy. FTIR data was used to classify the sherds and state their firing conditions as a result of determining their mineralogical composition using principal component analysis (PCA), multivariate curve resolution (MCR), and hierarchical cluster analysis (HCA). According to the PCA results, the second-order derivative FTIR spectrum with 19 smoothing points in the range of 1300–400 cm−1 was determined to be the most successful model in classifying sherds. As a result of MCR, which allows comparison of standard minerals obtained within the scope of the study, it was determined that kaolinite, illite, chlorite, and some feldspar types were dominant in the sherds. According to HCA analysis, all sherds except five of them exhibited a similar mineralogical structure. According to the derivative spectra, it was seen that the sherds had a composition consisting of kaolinite, illite, hematite, chlorite, and some feldspar types at different rates. Upon examining the data, it becomes evident that the sherds are composed of nearly identical minerals and might have been fired in an oxidizing atmosphere. Even while 279 sherds had many mineralogical traits, N-061, EB-030, N-043, C-068, and N-059 were found to have distinct proportions of comparable minerals, including more kaolinite, illite, calcite, and chlorite. Regarding color, additives, and the amount of ceramic pastes present, these five sherds differ from the others. This suggests that there might have been attempts at manufacture or pots brought in from outside the Yeşilova Höyük-Yassıtepe Höyük sites. The results provided from the derivative spectra showed that all sherds except five of them have been fired at about at temperatures slightly above 450–500 °C due to their relatively low kaolinite character, but below 800 °C because diopside and similar high-temperature minerals could not be detected. The five sherds may have been fired at a temperature of around 450–500 °C due to the presence of a high character of kaolinite, illite, and chlorite. It was understood that the residents of the sites of Yeşilova Höyük and Yassıtepe Höyük produced their ceramics using the same raw materials and the same production methods from the Neolithic period to EBA thanks to FTIR and chemometrics, which are very good tools for analyzing large numbers of sherds with low cost and fast analysis time.

本研究采用衰减全反射(ATR)傅立叶变换红外(FTIR)光谱法研究了从叶西罗瓦霍尤克和亚西特佩霍尤克遗址(安纳托利亚西部最古老的两个定居点)出土的 284 件陶器的矿物成分,这些陶器对应的时期从新石器时代到旧石器时代和青铜时代早期(EBA)。傅立叶变换红外光谱数据用于对陶片进行分类,并通过主成分分析(PCA)、多变量曲线解析(MCR)和分层聚类分析(HCA)确定其矿物成分,从而说明其烧制条件。根据 PCA 结果,二阶导数傅立叶变换红外光谱在 1300-400 cm-1 范围内的 19 个平滑点被确定为最成功的碎片分类模型。通过 MCR(可对研究范围内获得的标准矿物进行比较),确定高岭石、伊利石、绿泥石和一些长石类型在陶片中占主导地位。根据 HCA 分析,除 5 个碎片外,其他所有碎片都呈现出类似的矿物结构。根据衍射光谱分析,可以看出陶片的成分由高岭石、伊利石、赤铁矿、绿泥石和一些长石类型组成,其比例各不相同。对这些数据进行研究后发现,这些陶片由几乎相同的矿物组成,可能是在氧化气氛中烧制的。尽管 279 个碎片具有许多矿物学特征,但 N-061、EB-030、N-043、C-068 和 N-059 被发现具有不同比例的可比矿物,包括更多的高岭石、伊利石、方解石和绿泥石。在颜色、添加剂和陶瓷浆料的含量方面,这五件碎片与其他碎片有所不同。这表明,这些陶器可能是尝试制造的,也可能是从叶西罗瓦霍尤克-亚西特佩霍尤克遗址以外的地方运来的。衍射光谱提供的结果显示,由于高岭石含量相对较低,除五件陶器外,所有陶器的烧制温度都略高于 450-500 °C,但低于 800 °C,因为无法检测到透辉石和类似的高温矿物。由于高岭石、伊利石和绿泥石的特征较高,这五件陶器可能是在大约 450-500 °C 的温度下烧制的。傅立叶变换红外光谱和化学计量学是分析大量陶器碎片的非常好的工具,成本低,分析时间短,因此可以理解叶西罗瓦霍裕克遗址和亚西特佩霍裕克遗址的居民从新石器时代到 EBA 时代使用相同的原材料和相同的生产方法生产陶瓷。
{"title":"A comprehensive and innovative chemometric approach: Archaeometric analysis of the sherds from the Neolithic Period to the Chalcolithic and early Bronze Age with the full deployment of FTIR's molecular spectroscopic capabilities","authors":"İsmail Tarhan ,&nbsp;Zafer Derin ,&nbsp;Berfin Çelik ,&nbsp;Melek Öner ,&nbsp;Şahin Menteşe","doi":"10.1016/j.vibspec.2024.103727","DOIUrl":"10.1016/j.vibspec.2024.103727","url":null,"abstract":"<div><p>In this study, the mineralogical composition of 284 sherds obtained from the sites of Yeşilova Höyük and Yassıtepe Höyük, two of the oldest settlements in Western Anatolia, and corresponding to a wide period starting from the Neolithic period to the Chalcolithic and Early Bronze Age (EBA), was studied by attenuated total reflectance (ATR) Fourier transform infrared (FTIR) spectroscopy. FTIR data was used to classify the sherds and state their firing conditions as a result of determining their mineralogical composition using principal component analysis (PCA), multivariate curve resolution (MCR), and hierarchical cluster analysis (HCA). According to the PCA results, the second-order derivative FTIR spectrum with 19 smoothing points in the range of 1300–400 cm<sup>−1</sup> was determined to be the most successful model in classifying sherds. As a result of MCR, which allows comparison of standard minerals obtained within the scope of the study, it was determined that kaolinite, illite, chlorite, and some feldspar types were dominant in the sherds. According to HCA analysis, all sherds except five of them exhibited a similar mineralogical structure. According to the derivative spectra, it was seen that the sherds had a composition consisting of kaolinite, illite, hematite, chlorite, and some feldspar types at different rates. Upon examining the data, it becomes evident that the sherds are composed of nearly identical minerals and might have been fired in an oxidizing atmosphere. Even while 279 sherds had many mineralogical traits, N-061, EB-030, N-043, C-068, and N-059 were found to have distinct proportions of comparable minerals, including more kaolinite, illite, calcite, and chlorite. Regarding color, additives, and the amount of ceramic pastes present, these five sherds differ from the others. This suggests that there might have been attempts at manufacture or pots brought in from outside the Yeşilova Höyük-Yassıtepe Höyük sites. The results provided from the derivative spectra showed that all sherds except five of them have been fired at about at temperatures slightly above 450–500 °C due to their relatively low kaolinite character, but below 800 °C because diopside and similar high-temperature minerals could not be detected. The five sherds may have been fired at a temperature of around 450–500 °C due to the presence of a high character of kaolinite, illite, and chlorite. It was understood that the residents of the sites of Yeşilova Höyük and Yassıtepe Höyük produced their ceramics using the same raw materials and the same production methods from the Neolithic period to EBA thanks to FTIR and chemometrics, which are very good tools for analyzing large numbers of sherds with low cost and fast analysis time.</p></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"134 ","pages":"Article 103727"},"PeriodicalIF":2.7,"publicationDate":"2024-07-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141847539","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Gaining insight into protein structure via ATR-FTIR spectroscopy 通过 ATR-FTIR 光谱深入了解蛋白质结构
IF 2.7 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-07-23 DOI: 10.1016/j.vibspec.2024.103726
Đorđo Tintor , Katarina Ninković , Jelica Milošević, Natalija Đ. Polović

During the last decades, Fourier-transform infrared spectroscopy (FTIR) with attenuated total reflectance (ATR) has gained a substantial role in monitoring structural changes of proteins. The conformation of the polypeptide backbone, reflecting the pattern of intramolecular hydrogen bonding, affects the vibrational energy of carbonyl groups and, consequently, the absorption of infrared light. Specifically sensitive to the conformational state of a polypeptide is the Amide I region (1700–1600 cm−1), whose individual bands correlate with distinct secondary structures. ATR-FTIR thus provides the possibility to determine secondary structure content by deconvolution of the Amide I region, which makes it a valuable tool for investigating protein structure. Furthermore, the sensitivity of the Amide I band to subtle differences in hydrogen bonding enables discrimination between different β-sheet conformations, including intramolecular and intermolecular β-sheet. Compared to other methods for secondary structure determination, such as circular dichroism, this advantage makes infrared spectroscopy an excellent tool for monitoring aggregation processes. This review is intended to explain the principle of FTIR, the specificities of protein FTIR spectroscopy, to correlate the spectra with the protein secondary structure, and to provide different approaches for spectral analysis. To highlight FTIR contribution as a reliable parameter in protein structural analysis, here we review the data regarding the determination of the secondary structure of native globular proteins, the monitoring of discrete conformational changes upon destabilizing treatments, and the monitoring of structural changes in the aggregation process.

过去几十年来,傅立叶变换红外光谱(FTIR)和衰减全反射光谱(ATR)在监测蛋白质结构变化方面发挥了重要作用。多肽骨架的构象反映了分子内氢键的模式,会影响羰基的振动能量,从而影响对红外光的吸收。对多肽构象状态特别敏感的是酰胺 I 区域(1700-1600 cm-1),其各个波段与不同的二级结构相关。因此,ATR-傅立叶变换红外光谱可通过对酰胺 I 区进行解卷积来确定二级结构的含量,这使其成为研究蛋白质结构的重要工具。此外,酰胺 I 波段对氢键细微差别的敏感性使其能够区分不同的 β-片构象,包括分子内和分子间 β-片。与圆二色性等其他二级结构测定方法相比,这一优势使红外光谱成为监测聚集过程的绝佳工具。本综述旨在解释傅立叶变换红外光谱的原理、蛋白质傅立叶变换红外光谱的特性、光谱与蛋白质二级结构的相关性,并提供光谱分析的不同方法。为了突出傅立叶变换红外光谱在蛋白质结构分析中作为可靠参数的贡献,我们在此回顾了有关测定原生球蛋白二级结构、监测脱稳处理后的离散构象变化以及监测聚集过程中的结构变化的数据。
{"title":"Gaining insight into protein structure via ATR-FTIR spectroscopy","authors":"Đorđo Tintor ,&nbsp;Katarina Ninković ,&nbsp;Jelica Milošević,&nbsp;Natalija Đ. Polović","doi":"10.1016/j.vibspec.2024.103726","DOIUrl":"10.1016/j.vibspec.2024.103726","url":null,"abstract":"<div><p>During the last decades, Fourier-transform infrared spectroscopy (FTIR) with attenuated total reflectance (ATR) has gained a substantial role in monitoring structural changes of proteins. The conformation of the polypeptide backbone, reflecting the pattern of intramolecular hydrogen bonding, affects the vibrational energy of carbonyl groups and, consequently, the absorption of infrared light. Specifically sensitive to the conformational state of a polypeptide is the Amide I region (1700–1600 cm<sup>−1</sup>), whose individual bands correlate with distinct secondary structures. ATR-FTIR thus provides the possibility to determine secondary structure content by deconvolution of the Amide I region, which makes it a valuable tool for investigating protein structure. Furthermore, the sensitivity of the Amide I band to subtle differences in hydrogen bonding enables discrimination between different β-sheet conformations, including intramolecular and intermolecular β-sheet. Compared to other methods for secondary structure determination, such as circular dichroism, this advantage makes infrared spectroscopy an excellent tool for monitoring aggregation processes. This review is intended to explain the principle of FTIR, the specificities of protein FTIR spectroscopy, to correlate the spectra with the protein secondary structure, and to provide different approaches for spectral analysis. To highlight FTIR contribution as a reliable parameter in protein structural analysis, here we review the data regarding the determination of the secondary structure of native globular proteins, the monitoring of discrete conformational changes upon destabilizing treatments, and the monitoring of structural changes in the aggregation process.</p></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"134 ","pages":"Article 103726"},"PeriodicalIF":2.7,"publicationDate":"2024-07-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141849739","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The infrared spectrum of YI3 in the vapour phase 气相中 YI3 的红外光谱
IF 2.7 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-07-23 DOI: 10.1016/j.vibspec.2024.103725
R.J.M. Konings , A.S. Booij

The vibrational spectrum of the vapour phase above YI3 was measured by infrared spectroscopy. The spectrum revealed four strong bands, three of which could be assigned to the fundamantal infrared active vibrations of the YI3 monomer molecule. The observed frequencies agree very well with quantum-chemical calculations reported in literature. The presence of dimer molecules, the fraction of which is significant in the vapour according to literature, is also discussed in the context of assigning the fourth strong band in the experimental spectrum. Although its position matches well with a strong fundamental of the dimer, its intensity suggest a dimer fraction that is far outside the range for the other rare-earth triiodides.

通过红外光谱法测量了 YI3 以上气相的振动光谱。光谱显示了四个强带,其中三个可归属于 YI3 单体分子的基本红外活跃振动。观察到的频率与文献报道的量子化学计算结果非常吻合。根据文献,二聚体分子在蒸汽中的比例相当大,我们在讨论实验光谱中第四个强波段的归属时也讨论了二聚体分子的存在。虽然其位置与二聚物的强基带非常吻合,但其强度表明二聚物的比例远远超出了其他稀土三碘化物的范围。
{"title":"The infrared spectrum of YI3 in the vapour phase","authors":"R.J.M. Konings ,&nbsp;A.S. Booij","doi":"10.1016/j.vibspec.2024.103725","DOIUrl":"10.1016/j.vibspec.2024.103725","url":null,"abstract":"<div><p>The vibrational spectrum of the vapour phase above YI<sub>3</sub> was measured by infrared spectroscopy. The spectrum revealed four strong bands, three of which could be assigned to the fundamantal infrared active vibrations of the YI<sub>3</sub> monomer molecule. The observed frequencies agree very well with quantum-chemical calculations reported in literature. The presence of dimer molecules, the fraction of which is significant in the vapour according to literature, is also discussed in the context of assigning the fourth strong band in the experimental spectrum. Although its position matches well with a strong fundamental of the dimer, its intensity suggest a dimer fraction that is far outside the range for the other rare-earth triiodides.</p></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"134 ","pages":"Article 103725"},"PeriodicalIF":2.7,"publicationDate":"2024-07-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S092420312400078X/pdfft?md5=c2b554cc9653688e18dc90a75992b4bd&pid=1-s2.0-S092420312400078X-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141840664","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Development of non-invasive diagnosis based on FTIR spectroscopy 开发基于傅立叶变换红外光谱的无创诊断技术
IF 2.7 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-07-17 DOI: 10.1016/j.vibspec.2024.103724
Susmita Roy , Jürgen Hauer , Kiran Sankar Maiti

Numerous illnesses progress silently, often reaching a critical stage by the time symptoms appear, making medical intervention difficult. While there exist sophisticated clinical techniques for precise disease detection, they are often invasive procedure and as a rule of thumb is used only with definite symptomatic cases. In addition, the extreme clinical costs prevent a large population from taking advantage of contemporary medical facilities. A non-invasive, economically feasible screening method that detects diseases even in their pre-symptomatic stages may overcome many critical challenges in health and medicine. Utilizing vibrational spectroscopy to identify volatile metabolites offers promise as such a non-invasive, cost-effective diagnostic tool. The article outlines the potential of vibrational spectroscopy for non-invasive diagnostics and proposes a method for its clinical implementation.

许多疾病都是悄无声息地发展,往往在出现症状时已经到了危急阶段,因此很难进行医疗干预。虽然有精确检测疾病的先进临床技术,但这些技术通常都是侵入性程序,通常只用于有明确症状的病例。此外,高昂的临床费用也阻碍了大量人群利用现代医疗设施。一种非侵入性的、经济可行的筛查方法,甚至可以在疾病未出现症状的阶段就能检测出疾病,这可能会克服健康和医学领域的许多重大挑战。利用振动光谱鉴定挥发性代谢物有望成为这样一种无创、经济有效的诊断工具。文章概述了振动光谱学在无创诊断方面的潜力,并提出了一种临床应用方法。
{"title":"Development of non-invasive diagnosis based on FTIR spectroscopy","authors":"Susmita Roy ,&nbsp;Jürgen Hauer ,&nbsp;Kiran Sankar Maiti","doi":"10.1016/j.vibspec.2024.103724","DOIUrl":"10.1016/j.vibspec.2024.103724","url":null,"abstract":"<div><p>Numerous illnesses progress silently, often reaching a critical stage by the time symptoms appear, making medical intervention difficult. While there exist sophisticated clinical techniques for precise disease detection, they are often invasive procedure and as a rule of thumb is used only with definite symptomatic cases. In addition, the extreme clinical costs prevent a large population from taking advantage of contemporary medical facilities. A non-invasive, economically feasible screening method that detects diseases even in their pre-symptomatic stages may overcome many critical challenges in health and medicine. Utilizing vibrational spectroscopy to identify volatile metabolites offers promise as such a non-invasive, cost-effective diagnostic tool. The article outlines the potential of vibrational spectroscopy for non-invasive diagnostics and proposes a method for its clinical implementation.</p></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"134 ","pages":"Article 103724"},"PeriodicalIF":2.7,"publicationDate":"2024-07-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0924203124000778/pdfft?md5=7f94f0778fc7792fd49baed0524fd542&pid=1-s2.0-S0924203124000778-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141728742","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Size stable batch mode model updating method 尺寸稳定的批量模式模型更新方法
IF 2.7 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-07-04 DOI: 10.1016/j.vibspec.2024.103717
Zhonghai He , Xuwang Chen , Zhanbo Feng , Xiaofang Zhang

In near-infrared spectroscopy analysis, the predictive performance of models may degrade due to variations in the measurement environment and sample properties. Maintenance or updates to the model are essential to uphold prediction accuracy. The state-of-the-art approach for model updates involves labeling new samples and incorporating them into the calibration set. However, this strategy leads to an escalating size of the calibration dataset, and the low ratio of new samples renders the model update process inefficient. To enhance update efficiency, a size-stable updating strategy is presented which involves the simultaneous addition of new samples and removal of old samples. This is achieved by utilizing the new set as a basis for identifying and deleting significantly different old labeled samples. To improve labeling efficiency, a batch mode update is employed. Initially, calibration samples are clustered to yield multiple clusters with comparable sizes to the new update set. Subsequently, differences between multiple old sample clusters and the new set are calculated. The old sample cluster that most different are removed, accompanied by the addition of the new sample set to maintain calibration set size stability. In calculating set similarity, a multi-indices fusion method is employed to ensure accurate judgments. The efficacy of this method is validated through simulated and real data.

在近红外光谱分析中,由于测量环境和样品特性的变化,模型的预测性能可能会下降。模型的维护或更新对于保持预测准确性至关重要。最先进的模型更新方法包括标记新样本并将其纳入校准集。然而,这种策略会导致校准数据集的规模不断扩大,而且新样本的比例较低,使得模型更新过程效率低下。为了提高更新效率,我们提出了一种规模稳定的更新策略,即同时增加新样本和去除旧样本。这是通过利用新样本集作为识别和删除差异显著的旧标记样本的基础来实现的。为了提高标记效率,采用了批量模式更新。首先,对校准样本进行聚类,以产生与新的更新集大小相当的多个聚类。随后,计算多个旧样本集群与新集群之间的差异。差异最大的旧样本簇被移除,同时加入新样本集,以保持校准集大小的稳定性。在计算集合相似度时,采用了多指数融合方法,以确保判断的准确性。通过模拟和真实数据验证了该方法的有效性。
{"title":"Size stable batch mode model updating method","authors":"Zhonghai He ,&nbsp;Xuwang Chen ,&nbsp;Zhanbo Feng ,&nbsp;Xiaofang Zhang","doi":"10.1016/j.vibspec.2024.103717","DOIUrl":"https://doi.org/10.1016/j.vibspec.2024.103717","url":null,"abstract":"<div><p>In near-infrared spectroscopy analysis, the predictive performance of models may degrade due to variations in the measurement environment and sample properties. Maintenance or updates to the model are essential to uphold prediction accuracy. The state-of-the-art approach for model updates involves labeling new samples and incorporating them into the calibration set. However, this strategy leads to an escalating size of the calibration dataset, and the low ratio of new samples renders the model update process inefficient. To enhance update efficiency, a size-stable updating strategy is presented which involves the simultaneous addition of new samples and removal of old samples. This is achieved by utilizing the new set as a basis for identifying and deleting significantly different old labeled samples. To improve labeling efficiency, a batch mode update is employed. Initially, calibration samples are clustered to yield multiple clusters with comparable sizes to the new update set. Subsequently, differences between multiple old sample clusters and the new set are calculated. The old sample cluster that most different are removed, accompanied by the addition of the new sample set to maintain calibration set size stability. In calculating set similarity, a multi-indices fusion method is employed to ensure accurate judgments. The efficacy of this method is validated through simulated and real data.</p></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"134 ","pages":"Article 103717"},"PeriodicalIF":2.7,"publicationDate":"2024-07-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141594550","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Synthesis of a SERRS substrate based on TiO2 nanotubes films decorated with Ag nanoparticles for anthocyanins species determination in grape skin extracts 基于用银纳米颗粒装饰的 TiO2 纳米管薄膜的 SERRS 基底的合成,用于葡萄皮提取物中花青素种类的测定
IF 2.7 3区 化学 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-07-02 DOI: 10.1016/j.vibspec.2024.103716
Gabrielle Sarto , Thiago N.M. Cervantes , Maiara M. Slonski , João V. Martins , Pablo C. Soto , Henrique de Santana , Lucio C. de Almeida

The synthesis of TiO2 nanotubes film decorated with Ag nanoparticles (TiO2NTs/AgNPs) and its potential applicability as a SERRS (Surface-Enhanced Raman Resonance Scattering) substrate for detection and speciation of anthocyanins species in grape skin extracts is reported. Preliminary spectrophotometric analysis in the UV–Vis region allowed to identify the maximum absorption bands at 527 and 620 nm, related to the flavylium cation (AH+) and quinoidal base (A), respectively. The increase in the ratio AgNPs/extract concentration in colloidal solutions of AgNPs promoted the intensification of the vibrational modes of anthocyanins species, due to the SERRS effect. From deconvolutions of these SERRS spectra, a linear relationship (R2 = 0.993) for the intensity ratio of the vibrational modes A/AH+ (i.e., for the ratio 1631–1640/1648–1659 cm–1) as a function of the grape skin extract dilutions at colloidal solutions of AgNPs was found. The deposition of the extracts onto TiO2NTs/AgNPs surface promoted an additional SERRS signal intensification for A in detriment to AH+. The deconvolution of these SERRS spectra showed again a linear relationship (R2 = 0.999) between the intensity bands ratio A/AH+ and grape skin extract dilutions in the range of 0.1–1.0 %. The SERRS technique using the TiO2NTs/AgNPs substrate was more sensitive for anthocyanins quantification compared to the spectrophotometric one. The results revealed that the TiO2NTs/AgNPs films are versatile, efficient, and promising platforms for SERRS quantification and speciation of anthocyanin species in situ.

报告了用银纳米粒子(TiO2NTs/AgNPs)装饰的 TiO2 纳米管薄膜的合成及其作为 SERRS(表面增强拉曼共振散射)基底的潜在应用性,该基底可用于检测和标定葡萄皮提取物中的花青素种类。紫外可见光区的初步分光光度分析确定了 527 和 620 纳米波长处的最大吸收带,分别与黄素阳离子(AH+)和醌基(A-)有关。由于 SERRS 效应,AgNPs 胶体溶液中 AgNPs/提取物浓度比的增加促进了花青素振动模式的增强。通过对这些 SERRS 光谱进行解卷积,发现在 AgNPs 胶体溶液中,A-/AH+(即 1631-1640/1648-1659 cm-1)振动模式的强度比与葡萄皮提取物稀释度呈线性关系(R2 = 0.993)。将提取物沉积到 TiO2NTs/AgNPs 表面会促进 A- 的额外 SERRS 信号增强,而不利于 AH+。对这些 SERRS 光谱的解卷积再次表明,在 0.1-1.0 % 的范围内,A-/AH+ 的强度带比率与葡萄皮提取物稀释度之间存在线性关系(R2 = 0.999)。与分光光度法相比,使用 TiO2NTs/AgNPs 基质的 SERRS 技术对花青素的定量更为灵敏。研究结果表明,TiO2NTs/AgNPs 薄膜是一种多功能、高效、前景广阔的 SERRS 平台,可用于花青素物种的原位定量和分类。
{"title":"Synthesis of a SERRS substrate based on TiO2 nanotubes films decorated with Ag nanoparticles for anthocyanins species determination in grape skin extracts","authors":"Gabrielle Sarto ,&nbsp;Thiago N.M. Cervantes ,&nbsp;Maiara M. Slonski ,&nbsp;João V. Martins ,&nbsp;Pablo C. Soto ,&nbsp;Henrique de Santana ,&nbsp;Lucio C. de Almeida","doi":"10.1016/j.vibspec.2024.103716","DOIUrl":"https://doi.org/10.1016/j.vibspec.2024.103716","url":null,"abstract":"<div><p>The synthesis of TiO<sub>2</sub> nanotubes film decorated with Ag nanoparticles (TiO<sub>2</sub>NTs/AgNPs) and its potential applicability as a SERRS (Surface-Enhanced Raman Resonance Scattering) substrate for detection and speciation of anthocyanins species in grape skin extracts is reported. Preliminary spectrophotometric analysis in the UV–Vis region allowed to identify the maximum absorption bands at 527 and 620 nm, related to the flavylium cation (AH<sup>+</sup>) and quinoidal base (A<sup>–</sup>), respectively. The increase in the ratio AgNPs/extract concentration in colloidal solutions of AgNPs promoted the intensification of the vibrational modes of anthocyanins species, due to the SERRS effect. From deconvolutions of these SERRS spectra, a linear relationship (<em>R</em><sup>2</sup> = 0.993) for the intensity ratio of the vibrational modes A<sup>–</sup>/AH<sup>+</sup> (i.e., for the ratio 1631–1640/1648–1659 cm<sup>–1</sup>) as a function of the grape skin extract dilutions at colloidal solutions of AgNPs was found. The deposition of the extracts onto TiO<sub>2</sub>NTs/AgNPs surface promoted an additional SERRS signal intensification for A<sup>–</sup> in detriment to AH<sup>+</sup>. The deconvolution of these SERRS spectra showed again a linear relationship (<em>R</em><sup>2</sup> = 0.999) between the intensity bands ratio A<sup>–</sup>/AH<sup>+</sup> and grape skin extract dilutions in the range of 0.1–1.0 %. The SERRS technique using the TiO<sub>2</sub>NTs/AgNPs substrate was more sensitive for anthocyanins quantification compared to the spectrophotometric one. The results revealed that the TiO<sub>2</sub>NTs/AgNPs films are versatile, efficient, and promising platforms for SERRS quantification and speciation of anthocyanin species <em>in situ</em>.</p></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"134 ","pages":"Article 103716"},"PeriodicalIF":2.7,"publicationDate":"2024-07-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141607487","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Vibrational Spectroscopy
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1