Pub Date : 2024-07-01DOI: 10.1016/j.vibspec.2024.103710
Marinaldo V. de Souza Junior , João G. de Oliveira Neto , Jailton R. Viana , Richard P. Dutra , Mateus R. Lage , Adenilson O. dos Santos , Francisco F. de Sousa
The bis(chloro)-bis(1,10-phenanthroline)-manganese(II) crystalline complex, with the formula [Mn(phen)2Cl2], was synthesized by slow evaporation method. Structural, thermal, and vibrational properties of the crystal were obtained by X-ray powder diffraction (XRPD), thermal analysis, Raman, and Fourier-transform infrared (FT-IR) spectroscopy. XRPD results showed that the crystal belongs to a monoclinic system with P21/c () space group. Thermal analyses revealed that the material presents good stability within 300–558 K temperature interval. In addition, Hirshfeld surface analysis revealed the sites involved in intermolecular interactions predominant in the crystal. Also, all Raman and IR-active bands were assigned from computational calculations based on density functional theory (DFT) to analyze intramolecular vibration modes. Additionally, the electronic and vibrational properties were investigated considering three different media (vacuum, methanol, and water) using the integral equations formalism of the polarizable continuum model (IEFPCM). Lastly, the bactericidal assays on Staphylococcus aureus (ATCC 6538), Escherichia coli (ATCC 25922), Pseudomonas aeruginosa (ATCC 27853) e Enterococcus faecalis (ATCC 25923) were carried out to evaluate the antimicrobial activity of this complex.
采用缓慢蒸发法合成了双(氯)-双(1,10-菲罗啉)-锰(II)结晶配合物,其化学式为[Mn(phen)2Cl2]。通过 X 射线粉末衍射(XRPD)、热分析、拉曼和傅立叶变换红外光谱(FT-IR)获得了晶体的结构、热和振动特性。X 射线粉末衍射(XRPD)结果表明,该晶体属于 P21/c (C2h5) 空间群的单斜晶系。热分析表明,该材料在 300-558 K 的温度区间内具有良好的稳定性。此外,Hirshfeld 表面分析还揭示了晶体中分子间相互作用的主要位点。此外,所有拉曼和红外活性带都是根据密度泛函理论(DFT)计算得出的,用于分析分子内振动模式。此外,还利用可极化连续模型的积分方程形式主义(IEFPCM)研究了三种不同介质(真空、甲醇和水)的电子和振动特性。最后,对金黄色葡萄球菌(ATCC 6538)、大肠杆菌(ATCC 25922)、铜绿假单胞菌(ATCC 27853)和粪肠球菌(ATCC 25923)进行了杀菌试验,以评估该复合物的抗菌活性。
{"title":"Structural and spectroscopic properties, solvation effects, intermolecular interactions, and biological assays of a Mn(II)-complex with 1,10-phenanthroline and chloro ligands","authors":"Marinaldo V. de Souza Junior , João G. de Oliveira Neto , Jailton R. Viana , Richard P. Dutra , Mateus R. Lage , Adenilson O. dos Santos , Francisco F. de Sousa","doi":"10.1016/j.vibspec.2024.103710","DOIUrl":"https://doi.org/10.1016/j.vibspec.2024.103710","url":null,"abstract":"<div><p>The bis(chloro)-bis(1,10-phenanthroline)-manganese(II) crystalline complex, with the formula [Mn(phen)<sub>2</sub>Cl<sub>2</sub>], was synthesized by slow evaporation method. Structural, thermal, and vibrational properties of the crystal were obtained by X-ray powder diffraction (XRPD), thermal analysis, Raman, and Fourier-transform infrared (FT-IR) spectroscopy. XRPD results showed that the crystal belongs to a monoclinic system with <em>P</em>2<sub>1</sub>/<em>c</em> (<span><math><msubsup><mrow><mi>C</mi></mrow><mrow><mn>2</mn><mi>h</mi></mrow><mrow><mn>5</mn></mrow></msubsup></math></span>) space group. Thermal analyses revealed that the material presents good stability within 300–558 K temperature interval. In addition, Hirshfeld surface analysis revealed the sites involved in intermolecular interactions predominant in the crystal. Also, all Raman and IR-active bands were assigned from computational calculations based on density functional theory (DFT) to analyze intramolecular vibration modes. Additionally, the electronic and vibrational properties were investigated considering three different media (vacuum, methanol, and water) using the integral equations formalism of the polarizable continuum model (IEFPCM). Lastly, the bactericidal assays on <em>Staphylococcus aureus</em> (ATCC 6538), <em>Escherichia coli</em> (ATCC 25922), <em>Pseudomonas aeruginosa</em> (ATCC 27853) e <em>Enterococcus faecalis</em> (ATCC 25923) were carried out to evaluate the antimicrobial activity of this complex.</p></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"133 ","pages":"Article 103710"},"PeriodicalIF":2.7,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141481115","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-01DOI: 10.1016/j.vibspec.2024.103712
Cisem Altunayar-Unsalan
It is well known that polyphenols possess potent antioxidant qualities. However, the precise antioxidant action mechanism of phenolic compounds is still not well defined. It is evident that understanding the molecular mechanisms behind polyphenol-lipid interactions is necessary to comprehend this impact. The objective of this work is to examine the effect of phenolic compound coumarin on the physicochemical properties of cell membrane models. To accomplish this goal, model membranes made up of zwitterionic dimyristoylphosphatidylcholine (DMPC) and anionic dimyristoylphosphatidylglycerol (DMPG) lipids were used. These lipid species are the main component of the mammalian and gram-positive bacteria membranes, respectively. Differential scanning calorimetry (DSC) and Raman spectroscopy were applied for studying the interaction of coumarin with DMPC and DMPG. From the DSC results, it was found that pretransition was abolished for both lipid systems at 20 mol% coumarin. Main phase transition shifted to lower temperatures and broadened, but there was not a complete disappearance of main transition and coumarin was not fully miscible. A sharp peak at a higher temperature and a broad shoulder at a lower temperature of the main transition of DMPC were detected when compared to coumarin/DMPG binary system. A reduction in calorimetric enthalpy and entropy values of coumarin/DMPC system at 20 mol% was observed whereas an increase in these calorimetric parameters for coumarin/DMPG system occurred. Thus, the disorder was caused when 20 mol% coumarin interacts with DMPC lipid bilayers. The increase in enthalpy could be a result of the 20 mol% coumarin interactions with DMPG lipid bilayers or a possible generated partial interdigitation. From the Raman results, the peak height Raman intensity ratio I1090/I1130 showed that coumarin induces disorder in the DMPG bilayers in the gel phase due to the increasing gauche:trans ratio. According to the results obtained by DSC and Raman spectroscopy, it was found that coumarin has a varied effect on membranes made from lipids with choline and glycerol head groups. Thus, it is obvious that the polyphenol/membrane interactions can be significantly impacted by the lipids’ structural variations.
{"title":"Calorimetric and Raman spectroscopic studies of zwitterionic and anionic membrane interactions of phenolic compound coumarin","authors":"Cisem Altunayar-Unsalan","doi":"10.1016/j.vibspec.2024.103712","DOIUrl":"https://doi.org/10.1016/j.vibspec.2024.103712","url":null,"abstract":"<div><p>It is well known that polyphenols possess potent antioxidant qualities. However, the precise antioxidant action mechanism of phenolic compounds is still not well defined. It is evident that understanding the molecular mechanisms behind polyphenol-lipid interactions is necessary to comprehend this impact. The objective of this work is to examine the effect of phenolic compound coumarin on the physicochemical properties of cell membrane models. To accomplish this goal, model membranes made up of zwitterionic dimyristoylphosphatidylcholine (DMPC) and anionic dimyristoylphosphatidylglycerol (DMPG) lipids were used. These lipid species are the main component of the mammalian and gram-positive bacteria membranes, respectively. Differential scanning calorimetry (DSC) and Raman spectroscopy were applied for studying the interaction of coumarin with DMPC and DMPG. From the DSC results, it was found that pretransition was abolished for both lipid systems at 20 mol% coumarin. Main phase transition shifted to lower temperatures and broadened, but there was not a complete disappearance of main transition and coumarin was not fully miscible. A sharp peak at a higher temperature and a broad shoulder at a lower temperature of the main transition of DMPC were detected when compared to coumarin/DMPG binary system. A reduction in calorimetric enthalpy and entropy values of coumarin/DMPC system at 20 mol% was observed whereas an increase in these calorimetric parameters for coumarin/DMPG system occurred. Thus, the disorder was caused when 20 mol% coumarin interacts with DMPC lipid bilayers. The increase in enthalpy could be a result of the 20 mol% coumarin interactions with DMPG lipid bilayers or a possible generated partial interdigitation. From the Raman results, the peak height Raman intensity ratio I<sub>1090</sub>/I<sub>1130</sub> showed that coumarin induces disorder in the DMPG bilayers in the gel phase due to the increasing <em>gauche:trans</em> ratio. According to the results obtained by DSC and Raman spectroscopy, it was found that coumarin has a varied effect on membranes made from lipids with choline and glycerol head groups. Thus, it is obvious that the polyphenol/membrane interactions can be significantly impacted by the lipids’ structural variations.</p></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"133 ","pages":"Article 103712"},"PeriodicalIF":2.7,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141485092","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-01DOI: 10.1016/j.vibspec.2024.103711
Apostol Todorovski , Nikola Geskovski , Marina Petreska , Eric Deconinck , Hervé Rebière , Natalija Nakov , Katerina Brezovska , Jelena Acevska
The rising possibilities of vibrational spectroscopy coupled with multivariate modeling, enables many applications of these well-established analytical techniques, easy-to-use for rapid and non-destructive analysis. Owing to the lack of need for hazardous solvents or reagents in sample preparation, FTIR, NIR and Raman spectroscopy belong to the group of environmentally friendly techniques, known as “green analytical techniques”. Such characteristics re-introduce them into the pharmaceutical industry, especially as part of process-analytical-technology (PAT) tools for both qualitative and quantitative analysis.
This research aimed to assess the potential of ATR-FTIR, NIR and Raman as a PAT for the quantification of Vitamins B1 (thiamine), B6 (pyridoxine) and B12 (cyanocobalamin) in a powder blend, using a partial least square (PLS) regression model, as well as to monitor the powder blend homogeneity.
Results from each of the vibrational spectroscopy techniques were compared with those obtained by HPLC, which served as the reference analytical technique for quantifying the active substances in complex matrices using multivariate analysis. The developed PLS models were evaluated for their ability to quantify each of the active substances in the powder blend. The ATR-FTIR, NIR and Raman spectrum segments, revealed by the Variable Importance for Projection (VIP) plot for each model, respectively, were linked to the band assignment of each active ingredient.
The statistical indicators of the models (interpretation rate (R2X and R2Y), predictive ability (Q2 and RMSEP) and accuracy (RMSEE)) demonstrated their suitability for in-process estimation of vitamin B1, B6 and B12 contents in powder blends. Estimating B12 content proved more challenging, likely due to sampling issues related to its low content in the powder blend. Nevertheless, the observed variability in the models aligns with the variability in results obtained by HPLC, indicating the lack of blend homogeneity. Therefore, the quantification models could be considered for a further upgrade as PAT for monitoring the powder blend homogeneity during the manufacturing of vitamin blends.
{"title":"Screening the capability of vibrational spectroscopic techniques for simultaneous quantification of vitamins B1, B6, and B12 in a powder blend","authors":"Apostol Todorovski , Nikola Geskovski , Marina Petreska , Eric Deconinck , Hervé Rebière , Natalija Nakov , Katerina Brezovska , Jelena Acevska","doi":"10.1016/j.vibspec.2024.103711","DOIUrl":"https://doi.org/10.1016/j.vibspec.2024.103711","url":null,"abstract":"<div><p>The rising possibilities of vibrational spectroscopy coupled with multivariate modeling, enables many applications of these well-established analytical techniques, easy-to-use for rapid and non-destructive analysis. Owing to the lack of need for hazardous solvents or reagents in sample preparation, FTIR, NIR and Raman spectroscopy belong to the group of environmentally friendly techniques, known as “green analytical techniques”. Such characteristics re-introduce them into the pharmaceutical industry, especially as part of process-analytical-technology (PAT) tools for both qualitative and quantitative analysis.</p><p>This research aimed to assess the potential of ATR-FTIR, NIR and Raman as a PAT for the quantification of Vitamins B1 (thiamine), B6 (pyridoxine) and B12 (cyanocobalamin) in a powder blend, using a partial least square (PLS) regression model, as well as to monitor the powder blend homogeneity.</p><p>Results from each of the vibrational spectroscopy techniques were compared with those obtained by HPLC, which served as the reference analytical technique for quantifying the active substances in complex matrices using multivariate analysis. The developed PLS models were evaluated for their ability to quantify each of the active substances in the powder blend. The ATR-FTIR, NIR and Raman spectrum segments, revealed by the Variable Importance for Projection (VIP) plot for each model, respectively, were linked to the band assignment of each active ingredient.</p><p>The statistical indicators of the models (interpretation rate (R2X and R2Y), predictive ability (Q2 and RMSEP) and accuracy (RMSEE)) demonstrated their suitability for in-process estimation of vitamin B1, B6 and B12 contents in powder blends. Estimating B12 content proved more challenging, likely due to sampling issues related to its low content in the powder blend. Nevertheless, the observed variability in the models aligns with the variability in results obtained by HPLC, indicating the lack of blend homogeneity. Therefore, the quantification models could be considered for a further upgrade as PAT for monitoring the powder blend homogeneity during the manufacturing of vitamin blends.</p></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"133 ","pages":"Article 103711"},"PeriodicalIF":2.7,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141485104","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-01DOI: 10.1016/j.vibspec.2024.103713
Chengshun Jiang , Yongbing Cao , Feng Lu
Biomacromolecules, which mainly include nucleic acids, proteins, sugars, and lipids, are extensively present in the somatic cells of organisms. These four types of biomacromolecules not only play a crucial role in various normal physiological processes of organisms but also draw increasing attention in the field of in vitro research, such as nucleic acid aptamers and nucleotide drugs. Consequently, the accurate detection of biomacromolecules holds immense importance and significance. Surface-enhanced Raman Scattering (SERS) possesses a natural advantage in the detection of biomacromolecules due to its “fingerprint” characteristics, non-destructive nature, high sensitivity, simplicity, and speed, and it is not influenced by water signals. This paper primarily discusses the research progress of SERS in the detection of biomacromolecules, elaborates on the application of SERS in detecting nucleic acids, proteins, sugars, and lipids, and anticipates the potential application of SERS in biomacromolecule detection. It is anticipated that this paper will provide researchers with innovative ideas and methods for developing and applying new biomacromolecular detection techniques.
{"title":"Application of surface-enhanced Raman scattering technique for biomacromolecular detection","authors":"Chengshun Jiang , Yongbing Cao , Feng Lu","doi":"10.1016/j.vibspec.2024.103713","DOIUrl":"https://doi.org/10.1016/j.vibspec.2024.103713","url":null,"abstract":"<div><p>Biomacromolecules, which mainly include nucleic acids, proteins, sugars, and lipids, are extensively present in the somatic cells of organisms. These four types of biomacromolecules not only play a crucial role in various normal physiological processes of organisms but also draw increasing attention in the field of in vitro research, such as nucleic acid aptamers and nucleotide drugs. Consequently, the accurate detection of biomacromolecules holds immense importance and significance. Surface-enhanced Raman Scattering (SERS) possesses a natural advantage in the detection of biomacromolecules due to its “fingerprint” characteristics, non-destructive nature, high sensitivity, simplicity, and speed, and it is not influenced by water signals. This paper primarily discusses the research progress of SERS in the detection of biomacromolecules, elaborates on the application of SERS in detecting nucleic acids, proteins, sugars, and lipids, and anticipates the potential application of SERS in biomacromolecule detection. It is anticipated that this paper will provide researchers with innovative ideas and methods for developing and applying new biomacromolecular detection techniques.</p></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"133 ","pages":"Article 103713"},"PeriodicalIF":2.7,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141485090","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-06-27DOI: 10.1016/j.vibspec.2024.103715
Anjar Windarsih, Tri Hadi Jatmiko, Ayu Septi Anggraeni, Laila Rahmawati
Tuna fish oil (TO) is a valuable source of omega fatty acids and polyunsaturated fatty acids required for human growth and development. Triggered by economic reasons, TO can potentially be adulterated with pork oil (PO), which has a lower price. The adulteration is a serious problem because PO is a non-halal oil, which is truly prohibited to be consumed, especially for Muslim. This research aimed to develop an effective and efficient analytical technique for detecting PO adulteration in TO using Fourier transform infrared (FT-IR) spectroscopy aided by machine learning techniques. Various machine learning techniques were developed, including linear regression, support vector machine (SVM), k-nearest neighbor (kNN), artificial neural network (ANN), and gradient boosting. The result showed that SVM at the fingerprint region (1400–900 cm−1) demonstrated the best model to detect and predict PO in TO with the highest R2 (0.993) and the lowest root mean square error (RMSE) of 2.719 %. All levels of PO contained in TO could be accurately predicted, as indicated by the closeness between the actual value and predicted value of PO levels predicted by the model. In conclusion, machine learning could be a promising tool for detecting adulterants in fish oil samples. Further research on method standardization is important to propose the method as the method of choice for fish oil authentication, including halal authentication.
金枪鱼油(TO)是人体生长发育所需的欧米伽脂肪酸和多不饱和脂肪酸的重要来源。由于经济原因,金枪鱼油有可能掺入价格较低的猪肉油(PO)。掺假是一个严重的问题,因为猪油是一种非清真油,确实禁止食用,尤其是穆斯林。本研究旨在利用傅立叶变换红外光谱(FT-IR)技术,并在机器学习技术的辅助下,开发出一种有效且高效的分析技术,用于检测 TO 中的猪油掺假情况。研究开发了多种机器学习技术,包括线性回归、支持向量机(SVM)、k-近邻(kNN)、人工神经网络(ANN)和梯度提升。结果表明,指纹区域(1400-900 cm-1)的 SVM 是检测和预测 TO 中 PO 的最佳模型,R2(0.993)最高,均方根误差(RMSE)最低,为 2.719 %。该模型预测的 PO 水平的实际值与预测值非常接近,这表明 TO 中所含 PO 的所有水平都能准确预测。总之,机器学习是检测鱼油样品中掺假物质的一种有前途的工具。要将该方法作为鱼油鉴定(包括清真鉴定)的首选方法,就必须进一步开展方法标准化研究。
{"title":"Machine learning-assisted FT-IR spectroscopy for identification of pork oil adulteration in tuna fish oil","authors":"Anjar Windarsih, Tri Hadi Jatmiko, Ayu Septi Anggraeni, Laila Rahmawati","doi":"10.1016/j.vibspec.2024.103715","DOIUrl":"https://doi.org/10.1016/j.vibspec.2024.103715","url":null,"abstract":"<div><p>Tuna fish oil (TO) is a valuable source of omega fatty acids and polyunsaturated fatty acids required for human growth and development. Triggered by economic reasons, TO can potentially be adulterated with pork oil (PO), which has a lower price. The adulteration is a serious problem because PO is a non-halal oil, which is truly prohibited to be consumed, especially for Muslim. This research aimed to develop an effective and efficient analytical technique for detecting PO adulteration in TO using Fourier transform infrared (FT-IR) spectroscopy aided by machine learning techniques. Various machine learning techniques were developed, including linear regression, support vector machine (SVM), k-nearest neighbor (kNN), artificial neural network (ANN), and gradient boosting. The result showed that SVM at the fingerprint region (1400–900 cm<sup>−1</sup>) demonstrated the best model to detect and predict PO in TO with the highest R<sup>2</sup> (0.993) and the lowest root mean square error (RMSE) of 2.719 %. All levels of PO contained in TO could be accurately predicted, as indicated by the closeness between the actual value and predicted value of PO levels predicted by the model. In conclusion, machine learning could be a promising tool for detecting adulterants in fish oil samples. Further research on method standardization is important to propose the method as the method of choice for fish oil authentication, including halal authentication.</p></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"134 ","pages":"Article 103715"},"PeriodicalIF":2.7,"publicationDate":"2024-06-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141594549","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-06-25DOI: 10.1016/j.vibspec.2024.103709
Amy L. Farmer, Kelly Brown, Neil T. Hunt
The intention of this review is to reflect on the development of ultrafast 2D-IR spectroscopy to date and to attempt to envisage how the technique might develop in the period between now and 2050. As ultrafast 2D-IR spectroscopy measurements were first-reported in 1998, the timing of this article represents a ‘halfway’ stage, allowing us to look back on 26 years of development to provide a perspective on what the next 26 years might bring. We begin by briefly introducing the method and summarising the development of 2D-IR experiments thus far, but then focus on the most recent advances in technology, sample handling and data analysis methods to inform a discussion on the direction of travel for the field in terms of measurement capabilities. Finally, we examine the most recent applications of 2D-IR, with a particular focus on emerging research areas to show how the field continues to explore new challenges and provide novel insights.
{"title":"Spectroscopy 2050 – The future of ultrafast 2D-IR spectroscopy","authors":"Amy L. Farmer, Kelly Brown, Neil T. Hunt","doi":"10.1016/j.vibspec.2024.103709","DOIUrl":"https://doi.org/10.1016/j.vibspec.2024.103709","url":null,"abstract":"<div><p>The intention of this review is to reflect on the development of ultrafast 2D-IR spectroscopy to date and to attempt to envisage how the technique might develop in the period between now and 2050. As ultrafast 2D-IR spectroscopy measurements were first-reported in 1998, the timing of this article represents a ‘halfway’ stage, allowing us to look back on 26 years of development to provide a perspective on what the next 26 years might bring. We begin by briefly introducing the method and summarising the development of 2D-IR experiments thus far, but then focus on the most recent advances in technology, sample handling and data analysis methods to inform a discussion on the direction of travel for the field in terms of measurement capabilities. Finally, we examine the most recent applications of 2D-IR, with a particular focus on emerging research areas to show how the field continues to explore new challenges and provide novel insights.</p></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"134 ","pages":"Article 103709"},"PeriodicalIF":2.7,"publicationDate":"2024-06-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0924203124000626/pdfft?md5=0a5720a8ca41ab271bb1d918ae6cbca3&pid=1-s2.0-S0924203124000626-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141594548","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
During emergency inspections, drug control institutions often encounter samples with unknown components. It is essential to develop a method for quickly identifying these unknown components. Transforming the component analysis problem into a multi-label classification problem, this study addresses this challenge by employing non-destructive spectroscopic technology combined with machine learning. Spectral data from 368 compounds were initially collected for modeling. The ResUCA model was developed based on the residual neural network and compared with other models. Using the same data enhancement method, ResUCA outperformed the other models in terms of accuracy, recall, precision and F1_score. Subsequently, optimization was performed, considering factors such as data augmentation, spectrum selection, and sample processing, all of which impact the model's construction. Finally, the model was expanded in two steps, maintaining a consistently high recall rate, albeit with an increase in false positives. This suggests that fine-tuning the model parameters can help mitigate this challenge in various scenarios, highlighting its potential for ongoing optimization in future research efforts. Additionally, its applicability extends across diverse fields, including food, cosmetics, and coating analysis.
{"title":"Enhancing efficiency in emergency drug inspection through machine learning and non-destructive spectroscopy","authors":"Wenjie Zeng , Yunqi Qiu , Xiaotong Xiao , Yayang Huang , Zhuoya Luo","doi":"10.1016/j.vibspec.2024.103714","DOIUrl":"https://doi.org/10.1016/j.vibspec.2024.103714","url":null,"abstract":"<div><p>During emergency inspections, drug control institutions often encounter samples with unknown components. It is essential to develop a method for quickly identifying these unknown components. Transforming the component analysis problem into a multi-label classification problem, this study addresses this challenge by employing non-destructive spectroscopic technology combined with machine learning. Spectral data from 368 compounds were initially collected for modeling. The ResUCA model was developed based on the residual neural network and compared with other models. Using the same data enhancement method, ResUCA outperformed the other models in terms of accuracy, recall, precision and F1_score. Subsequently, optimization was performed, considering factors such as data augmentation, spectrum selection, and sample processing, all of which impact the model's construction. Finally, the model was expanded in two steps, maintaining a consistently high recall rate, albeit with an increase in false positives. This suggests that fine-tuning the model parameters can help mitigate this challenge in various scenarios, highlighting its potential for ongoing optimization in future research efforts. Additionally, its applicability extends across diverse fields, including food, cosmetics, and coating analysis.</p></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"133 ","pages":"Article 103714"},"PeriodicalIF":2.7,"publicationDate":"2024-06-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141438896","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The field of vibrational biospectroscopy has undergone continuous evolution, advancing from its earliest pioneers to the current innovators. Emerging frontier technologies have enabled vibrational biospectroscopy to reach new heights, expanding its applications in biomedical and clinical settings. Key advancements include the incorporation of multimodal spectroscopy, improvements in spatial resolution and the miniaturization of spectrometers coupled with machine learning. Multimodal spectroscopy is a growing subfield within vibrational biospectroscopy, offering different perspectives of the same sample to better understand the origins of vibrational modes. Meanwhile, the miniaturization of spectrometers has opened the door for field studies and personalized diagnostics, made possible by the integration of machine learning. The combination of miniaturized spectrometers and machine learning has paved the way for novel disease detection approaches. This review will discuss the historical progression of vibrational biospectroscopy and its potential for future applications, with a particular focus on the use of machine learning, multimodal spectroscopy, and miniaturized spectrometers in biomedicine. The primary goal of this review is to provide insight into the prospects of vibrational biospectroscopy, identify gaps in the current literature for future applications, and assess the potential impact of this field in the biomedical domain.
{"title":"Evolution of vibrational biospectroscopy: multimodal techniques and miniaturisation supported by machine learning","authors":"Aaron Mclean, Thulya Chakkumpulakkal Puthan Veettil, Magdalena Giergiel, Bayden R. Wood","doi":"10.1016/j.vibspec.2024.103708","DOIUrl":"10.1016/j.vibspec.2024.103708","url":null,"abstract":"<div><p>The field of vibrational biospectroscopy has undergone continuous evolution, advancing from its earliest pioneers to the current innovators. Emerging frontier technologies have enabled vibrational biospectroscopy to reach new heights, expanding its applications in biomedical and clinical settings. Key advancements include the incorporation of multimodal spectroscopy, improvements in spatial resolution and the miniaturization of spectrometers coupled with machine learning. Multimodal spectroscopy is a growing subfield within vibrational biospectroscopy, offering different perspectives of the same sample to better understand the origins of vibrational modes. Meanwhile, the miniaturization of spectrometers has opened the door for field studies and personalized diagnostics, made possible by the integration of machine learning. The combination of miniaturized spectrometers and machine learning has paved the way for novel disease detection approaches. This review will discuss the historical progression of vibrational biospectroscopy and its potential for future applications, with a particular focus on the use of machine learning, multimodal spectroscopy, and miniaturized spectrometers in biomedicine. The primary goal of this review is to provide insight into the prospects of vibrational biospectroscopy, identify gaps in the current literature for future applications, and assess the potential impact of this field in the biomedical domain.</p></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"133 ","pages":"Article 103708"},"PeriodicalIF":2.5,"publicationDate":"2024-06-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0924203124000614/pdfft?md5=a01ac887caddfe04f44cc36db9af7837&pid=1-s2.0-S0924203124000614-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141404522","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-06-03DOI: 10.1016/j.vibspec.2024.103705
Proficiency Munsaka, Peter Baricholo
We report the simulations of coherent supercontinuum generation from 2.63 to 8.04 μm in a silicon germanium photonic waveguide. The influence of input quantum noise pulses on coherence of the generated spectra was investigated. A high value of first order degree of coherence (i.e. 0.98) on supercontinuum spectra was predicted numerically. Our mid-infrared simulated coherent chirped supercontinuum source was then used as the input light source in absorption spectroscopy of carbon dioxide and methane gases. The simulated absorbance spectra for these greenhouse gases have high molecular contrast, thanks to the intense, chirped supercontinuum used.
{"title":"Mid-infrared gas absorption spectroscopy using a silicon germanium waveguide based chirped supercontinuum","authors":"Proficiency Munsaka, Peter Baricholo","doi":"10.1016/j.vibspec.2024.103705","DOIUrl":"10.1016/j.vibspec.2024.103705","url":null,"abstract":"<div><p>We report the simulations of coherent supercontinuum generation from 2.63 to 8.04 μm in a silicon germanium photonic waveguide. The influence of input quantum noise pulses on coherence of the generated spectra was investigated. A high value of first order degree of coherence (i.e. 0.98) on supercontinuum spectra was predicted numerically. Our mid-infrared simulated coherent chirped supercontinuum source was then used as the input light source in absorption spectroscopy of carbon dioxide and methane gases. The simulated absorbance spectra for these greenhouse gases have high molecular contrast, thanks to the intense, chirped supercontinuum used.</p></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"133 ","pages":"Article 103705"},"PeriodicalIF":2.5,"publicationDate":"2024-06-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141274991","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-06-02DOI: 10.1016/j.vibspec.2024.103696
Chandan Bhai Patel , Satyabratt Pandey , Sachin K. Singh , K. Vikram , Ranjan K. Singh
Liquid crystalline properties of the synthesized liquid crystal (LC) N-(o-hydroxybenzylidene)-N'-(4-n-alkoxybenzylidene) azines (HBDBA) are probed thoroughly using the comprehensive array of techniques e.g. differential scanning calorimetry (DSC), differential thermal analysis (DTA), polarizing optical microscopy (POM), temperature-dependent Raman spectroscopy and density functional theory (DFT) method. In this study, intricate molecular interactions crucial for mesophase formation of liquid crystalline system HBDBA and molecular rearrangement that occurs during LC transitions are unravelled comprehensively. Remarkably, at the Cr → SmA phase transition, the peak position, linewidth, and intensity of signature Raman bands are prominently changed. A thorough analysis of Raman marker bands and DFT calculation confirm the disruption of intramolecular hydrogen bonds in HBDBA at the Cr → SmA transition. The conclusion of the present study enriches the understanding of the underlying mechanisms of mesophase formation and intricate molecular interactions and arrangement at the molecular level of the thermotropic LC.
本研究采用一系列综合技术,如差示扫描量热法(DSC)、差示热分析法(DTA)、偏振光学显微镜(POM)、温度依赖性拉曼光谱和密度泛函理论(DFT)方法,对合成的液晶(LC)N-(邻羟基亚苄基)-N'-(4-正烷氧基亚苄基)氮杂环丁烷(HBDBA)的液晶特性进行了深入探讨。这项研究全面揭示了对液晶体系 HBDBA 介相形成至关重要的错综复杂的分子相互作用以及液晶转变过程中发生的分子重排。值得注意的是,在 Cr → SmA 相转变过程中,标志性拉曼带的峰位、线宽和强度都发生了显著变化。对拉曼标记带的深入分析和 DFT 计算证实了在 Cr → SmA 相变时 HBDBA 分子内氢键的破坏。本研究的结论丰富了人们对介相形成的基本机制以及热致性低聚物分子水平上错综复杂的分子相互作用和排列的理解。
{"title":"Probing the mesophase formation in thermotropic liquid crystal HBDBA using temperature-dependent Raman spectroscopy and DFT method","authors":"Chandan Bhai Patel , Satyabratt Pandey , Sachin K. Singh , K. Vikram , Ranjan K. Singh","doi":"10.1016/j.vibspec.2024.103696","DOIUrl":"10.1016/j.vibspec.2024.103696","url":null,"abstract":"<div><p>Liquid crystalline properties of the synthesized liquid crystal (LC) N-(o-hydroxybenzylidene)-N'-(4-n-alkoxybenzylidene) azines (HBDBA) are probed thoroughly using the comprehensive array of techniques e.g. differential scanning calorimetry (DSC), differential thermal analysis (DTA), polarizing optical microscopy (POM), temperature-dependent Raman spectroscopy and density functional theory (DFT) method. In this study, intricate molecular interactions crucial for mesophase formation of liquid crystalline system HBDBA and molecular rearrangement that occurs during LC transitions are unravelled comprehensively. Remarkably, at the Cr → SmA phase transition, the peak position, linewidth, and intensity of signature Raman bands are prominently changed. A thorough analysis of Raman marker bands and DFT calculation confirm the disruption of intramolecular hydrogen bonds in HBDBA at the Cr → SmA transition. The conclusion of the present study enriches the understanding of the underlying mechanisms of mesophase formation and intricate molecular interactions and arrangement at the molecular level of the thermotropic LC.</p></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"133 ","pages":"Article 103696"},"PeriodicalIF":2.5,"publicationDate":"2024-06-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141278644","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}