VirusDisease最新文献

Patients with chronic kidney disorders, such as hemodialysis, are at a higher risk of infection with hepatitis viruses than the other population due to high nosocomial transmission by the dialysis units. The incidence of occult HCV infection (OCI) among chronic hemodialysis (CHD) remains controversial and the real burden of HCV in this population may be affected by the rate of OCI. This study aimed to evaluate the prevalence of OCI among patients with CHD from Lorestan province, Western Iran. In this cross-sectional study, whole blood samples were collected from 122 patients with CHD. Subsequently, anti-HCV antibody and HCV-RNA were assessed in serum/peripheral blood mononuclear cells (PBMCs) using Enzyme-Linked Immunosorbent Assay and Real-Time PCR technique, respectively. Out of the 122 patients, 61.15% were male and 38.8% were female. Regarding HCV results, out of the 122 studied patients, 4 cases (3.3%) were positive for anti-HCV IgM Ab and 3 patients (2.47%) for anti-HCV IgG Ab in their serum. Moreover, none of the 122 patients were positive for HCV-RNA in serum samples, while in PBMC samples, two patients (1.6%) tested positive for HCV-RNA, of which one patient was anti-HCV IgG Ab positive. Furthermore, the prevalence of OCI was correlated with the history of blood transfusion and serum level of transaminases (P = 0.012). The results of the current study suggest that there is a potential risk of occult HCV infection among patients undergoing hemodialysis. Therefore, it is necessary to use appropriate molecular techniques for early diagnosis and treatment of these patients.

Bovine herpesvirus 4 (BoHV-4) is responsible for reproductive disorders and abortions in cattle. The aim of this study was to investigate the potential role of BoHV-4 in abortions in dairy cows when the possible aetiological cause could not be determined in Türkiye. The study also provided the molecular characterization of BoHV-4 strains based on the gB gene. In this study, foetuses (n = 188) and serum (n = 50) were retrospectively used for PCR and indirect ELISA assays, respectively. In addition, foetuses with BoHV-4 were tested for the isolation of the BoHV-4 strain in MDBK cell culture. The BoHV-4 gB gene was detected in the brain, liver, lung, kidney, and spleen tissues of three foetuses out of 188 aborted foetuses. The BoHV-4 strain was isolated from the kidney of one foetus in MDBK cell culture. The three aborted foetuses were from different cows in the same herd in 2021. On this dairy farm, the BoHV-4 seroprevalence rate in cattle with a history of abortion was 96% (48/50). Phylogenetic analysis revealed that the detected strains belong to genotype II. The present study shows that the impact of BoHV-4 on abortions in cattle should not be ignored. It can therefore be informative to focus on BoHV-4 in routine laboratory diagnostics for abortions without a proven aetiology or in cattle herds that have previously been infected with BoHV-4.

Begomoviruses, member of the Geminiviridae family, are responsible for significant economic losses in crops worldwide. Chilli leaf curl India virus (ChiLCINV) is a well-known begomovirus that causes leaf curl disease, primarily affecting plants in the Solanaceae family. In this study, sample from a Jamaica cherry (Muntingia calabura) tree showing typical begomovirus symptoms of mosaic and leaf curling was collected from Nagavara village in the Bengaluru Rural district of Karnataka State, India. The collected sample was designated as the MUT-1 isolate. The association of the begomovirus (DNA-A) and betasatellites with the sample was confirmed by PCR using begomovirus-specific primers, resulting in the expected amplicons of approximately 1.2 kb and 1.3 kb, respectively. No amplification was obtained for DNA-B and alphasatellite specific primers. The complete genome sequence of DNA-A of begomovirus isolate MUT-1 was obtained through rolling circle amplification and compared with other begomoviruses using Sequence Demarcation Tool which revealed that, DNA-A of MUT-1 isolate, (Acc.No. PP475538) showed maximum nucleotide (nt) identity of 98.7-99.4% with chilli leaf curl India virus. Further, sequence of betasattelite (Acc.No. PP493212) of this isolate shared maximum nt identity of 86.5-100% with tomato leaf curl Bangladesh betasatellite (ToLCBDB). Recombination and GC plot analysis showed that the presence of two and three intraspecific recombination event in DNA-A and betasatellite genomic regions, respectively and are derived from the previously reported begomoviruses. This study presents one more evidence of expanding host range for begomoviruses and first record of begomovirus associated with mosaic and leaf curl disease of Jamaica cherry (M. calabura) from India.

Supplementary information: The online version contains supplementary material available at 10.1007/s13337-024-00891-w.

The impact of plant diseases coupled with climate change on agriculture worldwide cannot be overemphasized from negative effects on crop yield as well as economy to food insecurity. The model plants are essential for understanding the intricacies of plant-pathogen interactions. One of such plants is the tomato (Solanum lycopersicum L.). Researchers hope to increase tomato productivity and boost its resilience to pathogen attacks by utilizing OMICS and biotechnological methods. With an emphasis on tomato viral infections, this review summarizes significant discoveries and developments from earlier research. The analysis elucidates ongoing efforts to advance plant pathology by exploring the implications for sustainability and tomato production.

Studying the diversity of viruses found in uncultivated fungi, including those forming mycorrhizal relationships, is essential. It's equally important to explore viral communities in fungi that cause plant diseases or are economically significant. This dual approach helps us grasp the full scope of mycovirus diversity and evolution. Mycorrhizal fungi, in particular, host a wide range of viruses, shedding light on viral diversity and evolution. In this study, we present the discovery and complete genome characterization of a novel mitovirus infecting the hypogeous mycorrhizal fungus Tuber rufum. This virus, denominated "Tuber rufum mitovirus 1" (TrMV1) has a genome size of 2864 nucleotides with a G + C content of 37.53%. It contains a single open reading frame (ORF) responsible for encoding RNA dependent RNA polymerase (RdRp). Comparative analysis using BLASTp reveals that the protein encoded by TrMV1 shares significant sequence similarities with those found in the Triamitovirus genus. Specifically, TrMV1 shows the closest resemblance (43.35% identity) to Sopawar virus, a mitovirus previously detected in soil environments through metatranscriptomic analyses. Phylogenetic examination categorizes TrMV1 as a member of the Triamitovirus genus within the Mitoviridae family. This finding marks the first identification of a mitovirus within the hypogeous mycorrhizal fungus Tuber rufum. The discovery of TrMV1 expands our knowledge of Mitoviridae family diversity and evolution, contributing to the growing repository of mycovirus sequences.

Supplementary information: The online version contains supplementary material available at 10.1007/s13337-024-00887-6.