首页 > 最新文献

2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro最新文献

英文 中文
Automatic detection of patient motion in cone-beam computed tomography 锥形束计算机断层扫描中病人运动的自动检测
Pub Date : 2010-04-14 DOI: 10.1109/ISBI.2010.5490224
S. Ens, J. Ulrici, E. Hell, T. Buzug
Some computed tomography (CT) applications, for example micro- or dental-CT, have long acquisition sequences and consequently motion of the object is likely to occur. The common motion correction method, not using optical techniques for patient motion measurement, is data-driven motion-correction (DDMC). This method is based on subdivision of the projection data into motion free subsections. Therefore, motion positions have to be determined. In this work, an approach for motion position detection in cone-beam CT data is described. Distance metric values, computed from two successive projection images, provide information of the incorporation of movement. Quantitative evaluation of motion detection is possible due to utilization of CT data with known movement positions, using generated dental cone-beam CT datasets. The proposed method uses nothing but information contained in the cone-beam projections. Therefore, it is generally applicable for motion detection in cone-beam CT. A correct detection rate of 99.89% is achieved by using a structural similarity index as a distance measure.
一些计算机断层扫描(CT)的应用,例如微型或牙科CT,有很长的采集序列,因此很可能发生物体的运动。常用的运动校正方法是数据驱动运动校正(DDMC),不使用光学技术进行患者运动测量。该方法基于将投影数据细分为运动自由的子部分。因此,必须确定运动位置。本文提出了一种基于锥束CT数据的运动位置检测方法。距离度量值,从两个连续的投影图像计算,提供信息的结合运动。由于利用已知运动位置的CT数据,使用生成的牙锥束CT数据集,可以对运动检测进行定量评估。所提出的方法只利用锥束投影中包含的信息。因此,一般适用于锥束CT的运动检测。采用结构相似性指数作为距离度量,正确率达到99.89%。
{"title":"Automatic detection of patient motion in cone-beam computed tomography","authors":"S. Ens, J. Ulrici, E. Hell, T. Buzug","doi":"10.1109/ISBI.2010.5490224","DOIUrl":"https://doi.org/10.1109/ISBI.2010.5490224","url":null,"abstract":"Some computed tomography (CT) applications, for example micro- or dental-CT, have long acquisition sequences and consequently motion of the object is likely to occur. The common motion correction method, not using optical techniques for patient motion measurement, is data-driven motion-correction (DDMC). This method is based on subdivision of the projection data into motion free subsections. Therefore, motion positions have to be determined. In this work, an approach for motion position detection in cone-beam CT data is described. Distance metric values, computed from two successive projection images, provide information of the incorporation of movement. Quantitative evaluation of motion detection is possible due to utilization of CT data with known movement positions, using generated dental cone-beam CT datasets. The proposed method uses nothing but information contained in the cone-beam projections. Therefore, it is generally applicable for motion detection in cone-beam CT. A correct detection rate of 99.89% is achieved by using a structural similarity index as a distance measure.","PeriodicalId":250523,"journal":{"name":"2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro","volume":"8 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-04-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"115491352","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 15
Bayesian fisher information criterion for sampling optimization in ASL-MRI 基于贝叶斯fisher信息准则的ASL-MRI采样优化
Pub Date : 2010-04-14 DOI: 10.1109/ISBI.2010.5490127
J. Sanches, I. Sousa, P. Figueiredo
Pulsed Arterial Spin Labeling (PASL) techniques potentially allow the absolute, non-invasive quantification of brain perfusion using Magnetic Resonance Imaging (MRI). This can be achieved by fitting a kinetic model to the data acquired at a number of inversion times (TI). Some model parameters such as the arterial transit time need to be estimated together with perfusion, while others are usually assumed to be known. The accuracy of the model estimation strongly depends on the distribution of the TI sampling points. Here, we propose a Bayesian framework for PASL perfusion estimation based on the Fisher information criterion, whereby the optimal sampling points can be determined taking into account the uncertainty of the model parameters as well as the amount of noise in the data. We show that the optimal sampling strategy for PASL depends on the a priori knowledge of the model parameters and this should therefore be taken into account.
脉冲动脉自旋标记(PASL)技术可能允许使用磁共振成像(MRI)对脑灌注进行绝对的、无创的量化。这可以通过将动力学模型拟合到多次反演(TI)获得的数据中来实现。有些模型参数如动脉传递时间需要与灌注一起估计,而其他模型参数通常假设是已知的。模型估计的准确性很大程度上取决于TI采样点的分布。在这里,我们提出了一个基于Fisher信息准则的PASL灌注估计贝叶斯框架,该框架可以考虑模型参数的不确定性以及数据中的噪声量来确定最佳采样点。我们表明,PASL的最佳采样策略依赖于模型参数的先验知识,因此应该考虑到这一点。
{"title":"Bayesian fisher information criterion for sampling optimization in ASL-MRI","authors":"J. Sanches, I. Sousa, P. Figueiredo","doi":"10.1109/ISBI.2010.5490127","DOIUrl":"https://doi.org/10.1109/ISBI.2010.5490127","url":null,"abstract":"Pulsed Arterial Spin Labeling (PASL) techniques potentially allow the absolute, non-invasive quantification of brain perfusion using Magnetic Resonance Imaging (MRI). This can be achieved by fitting a kinetic model to the data acquired at a number of inversion times (TI). Some model parameters such as the arterial transit time need to be estimated together with perfusion, while others are usually assumed to be known. The accuracy of the model estimation strongly depends on the distribution of the TI sampling points. Here, we propose a Bayesian framework for PASL perfusion estimation based on the Fisher information criterion, whereby the optimal sampling points can be determined taking into account the uncertainty of the model parameters as well as the amount of noise in the data. We show that the optimal sampling strategy for PASL depends on the a priori knowledge of the model parameters and this should therefore be taken into account.","PeriodicalId":250523,"journal":{"name":"2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro","volume":"54 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-04-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"115680981","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 10
Cell-based graph cut for segmentation of 2D/3D sonographic breast images 基于细胞的二维/三维超声乳腺图像分割图切割
Pub Date : 2010-04-14 DOI: 10.1109/ISBI.2010.5490384
Hsin-Hung Chiang, Jie-Zhi Cheng, Pei-Kai Hung, Chun-You Liu, C. Chung, Chung-Ming Chen
Boundary delineation is the fundamental basis of many sonographic image analyses. In sonographic breast lesion images, it's complicated and time consuming for physicians to delineate the lesion boundaries. When it comes to three dimensional sonographic breast lesions image, delineation of lesion boundary becomes much more complicated. Taking advantage of cell competition algorithm along with its good region structure, generated cells can be served as elegant nodes for graph cut. Further, a similar weight function plays an important role in the estimation of lesion boundary to avoid visible weak edge and isolated node in graph cut. The integration of cell competition and graph cut can be intuitively implemented in three dimensional images, in addition to the reduction of computational time. With efficiency and accuracy of lesion detection, a computer aided system was therefore developed to fulfill clinical applications.
边界划定是许多超声图像分析的基础。在乳腺超声病变图像中,对医生来说,病灶边界的划定是一项复杂而耗时的工作。在乳腺三维超声图像中,病灶边界的划定变得更加复杂。利用细胞竞争算法良好的区域结构,生成的细胞可以作为图切的优雅节点。此外,相似权函数在损伤边界估计中起着重要作用,避免了图割中可见的弱边和孤立节点。除了减少计算时间外,还可以直观地在三维图像中实现细胞竞争和图切的集成。由于病变检测的效率和准确性,因此开发了一种计算机辅助系统来满足临床应用。
{"title":"Cell-based graph cut for segmentation of 2D/3D sonographic breast images","authors":"Hsin-Hung Chiang, Jie-Zhi Cheng, Pei-Kai Hung, Chun-You Liu, C. Chung, Chung-Ming Chen","doi":"10.1109/ISBI.2010.5490384","DOIUrl":"https://doi.org/10.1109/ISBI.2010.5490384","url":null,"abstract":"Boundary delineation is the fundamental basis of many sonographic image analyses. In sonographic breast lesion images, it's complicated and time consuming for physicians to delineate the lesion boundaries. When it comes to three dimensional sonographic breast lesions image, delineation of lesion boundary becomes much more complicated. Taking advantage of cell competition algorithm along with its good region structure, generated cells can be served as elegant nodes for graph cut. Further, a similar weight function plays an important role in the estimation of lesion boundary to avoid visible weak edge and isolated node in graph cut. The integration of cell competition and graph cut can be intuitively implemented in three dimensional images, in addition to the reduction of computational time. With efficiency and accuracy of lesion detection, a computer aided system was therefore developed to fulfill clinical applications.","PeriodicalId":250523,"journal":{"name":"2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro","volume":"71 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-04-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"116981891","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 17
High field clinical MRI neuroimaging 临床高场MRI神经成像
Pub Date : 2010-04-14 DOI: 10.1109/ISBI.2010.5490280
M. Buchem, J. Grond, M. Versluis, M. Osch, W. Teeuwisse, H. Kan, A. Webb
Clinical applications of high field MR take advantage of the increased sensitivity to magnetic field inhomogeneity, spatial resolution, signal-to-noise, and spectral resolution. Examples of each facet are demonstrated for 7T patient neuroimaging and localized spectroscopy.
高场磁共振的临床应用充分利用了其对磁场不均匀性、空间分辨率、信噪比和光谱分辨率的敏感性。每个方面的例子都展示了7T患者的神经成像和局部光谱。
{"title":"High field clinical MRI neuroimaging","authors":"M. Buchem, J. Grond, M. Versluis, M. Osch, W. Teeuwisse, H. Kan, A. Webb","doi":"10.1109/ISBI.2010.5490280","DOIUrl":"https://doi.org/10.1109/ISBI.2010.5490280","url":null,"abstract":"Clinical applications of high field MR take advantage of the increased sensitivity to magnetic field inhomogeneity, spatial resolution, signal-to-noise, and spectral resolution. Examples of each facet are demonstrated for 7T patient neuroimaging and localized spectroscopy.","PeriodicalId":250523,"journal":{"name":"2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro","volume":"32 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-04-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"124918532","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Fast localize the bioluminescent source via graph cuts 通过图切割快速定位生物发光源
Pub Date : 2010-04-14 DOI: 10.1109/ISBI.2010.5490079
Kai Liu, Jie Tian, Shouping Zhu, C. Qin, Xing Zhang, Dong Han
Bioluminescence imaging (BLI) and bioluminescence tomography (BLT) make it possible to elucidate cellular signatures to better understand the effects of human disease in small animal in vivo. However, to the best of our knowledge, the existing gradient-type reconstruction methods in BLT are not very efficient, and often require a relatively small volume of interest (VOI) for feasible results. In this paper, a fast graph cuts based reconstruction method for BLT is presented, which is to localize the bioluminescent source in heterogeneous mouse atlas via max-flow/min-cut algorithm. Since the original graph cuts theory can only handle graph-representable problem, the quadratic pseudo-boolean optimization is incorporated to make the graph tractable. The internal light source can be reconstructed from the whole domain, so a priori knowledge of VOI can be avoided in this method. In the experiments, the proposed method is validated in a heterogeneous mouse atlas, and the source can be localized reliably and efficiently by graph cuts; and compared with a gradient-type method, graph cuts is about 25–50 times faster.
生物发光成像(BLI)和生物发光断层扫描(BLT)使阐明细胞特征成为可能,从而更好地了解人类疾病在小动物体内的影响。然而,据我们所知,现有的BLT梯度型重建方法效率不高,并且通常需要相对较小的兴趣量(VOI)才能获得可行的结果。本文提出了一种基于图切割的BLT快速重建方法,利用最大流量/最小切割算法在异质小鼠图谱中定位生物发光源。由于原有的图割理论只能处理图可表示问题,因此引入二次伪布尔优化,使图具有可处理性。该方法可以从整个域重构内部光源,从而避免了对视场的先验知识。实验结果表明,该方法在异种小鼠图谱中得到了验证,通过图切可以可靠有效地定位源;与梯度型方法相比,图切割的速度大约快25-50倍。
{"title":"Fast localize the bioluminescent source via graph cuts","authors":"Kai Liu, Jie Tian, Shouping Zhu, C. Qin, Xing Zhang, Dong Han","doi":"10.1109/ISBI.2010.5490079","DOIUrl":"https://doi.org/10.1109/ISBI.2010.5490079","url":null,"abstract":"Bioluminescence imaging (BLI) and bioluminescence tomography (BLT) make it possible to elucidate cellular signatures to better understand the effects of human disease in small animal in vivo. However, to the best of our knowledge, the existing gradient-type reconstruction methods in BLT are not very efficient, and often require a relatively small volume of interest (VOI) for feasible results. In this paper, a fast graph cuts based reconstruction method for BLT is presented, which is to localize the bioluminescent source in heterogeneous mouse atlas via max-flow/min-cut algorithm. Since the original graph cuts theory can only handle graph-representable problem, the quadratic pseudo-boolean optimization is incorporated to make the graph tractable. The internal light source can be reconstructed from the whole domain, so a priori knowledge of VOI can be avoided in this method. In the experiments, the proposed method is validated in a heterogeneous mouse atlas, and the source can be localized reliably and efficiently by graph cuts; and compared with a gradient-type method, graph cuts is about 25–50 times faster.","PeriodicalId":250523,"journal":{"name":"2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro","volume":"89 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-04-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"123691450","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Early diagnosis of dementia based on intersubject whole-brain dissimilarities 基于主体间全脑差异的痴呆早期诊断
Pub Date : 2010-04-14 DOI: 10.1109/ISBI.2010.5490366
S. Klein, M. Loog, F. Lijn, T. Heijer, A. Hammers, Marleen de Bruijne, A. Lugt, R. Duin, M. Breteler, W. Niessen
This article studies the possibility of detecting dementia in an early stage, using nonrigid registration of MR brain scans in combination with dissimilarity-based pattern recognition techniques. Instead of focussing on the shape of a single brain structure, we take into account the shape differences within the entire brain. Imaging data was obtained from a longitudinal, population based study of the elderly. A set of 29 subjects was identified, who were asymptomatic at the time of scanning, but were diagnosed as having dementia within 0.7 to 5 years after the scan, and a set of 29 age and gender matched healthy controls were selected. Each subject was registered to all other subjects, using a nonrigid registration algorithm. Based on statistics of the deformation field in the brain, a dissimilarity measure was calculated between each pair of subjects, yielding a 58×58 dissimilarity matrix. A kNN classifier was trained on the dissimilarity matrix and the performance was tested in a leave-one-out experiment. A classification accuracy of 81% was attained (spec. 83%, sens. 79%). This demonstrates the potential of whole-brain intersubject dissimilarities to aid in early diagnosis of dementia.
本文研究了在早期阶段检测痴呆症的可能性,使用磁共振脑扫描的非刚性注册结合基于差异的模式识别技术。我们没有关注单一大脑结构的形状,而是考虑了整个大脑的形状差异。影像学数据来自一项以老年人为基础的纵向研究。确定了29名受试者,他们在扫描时无症状,但在扫描后0.7至5年内被诊断为患有痴呆症,并选择了29名年龄和性别匹配的健康对照组。使用非刚性配准算法将每个受试者与所有其他受试者进行配准。根据大脑变形场的统计数据,计算每对受试者之间的不相似度,得出58×58不相似矩阵。在不相似矩阵上训练了kNN分类器,并在留一实验中对其性能进行了测试。分类准确率为81%(规范83%,传感器79%)。这证明了全脑主体间差异有助于早期诊断痴呆症的潜力。
{"title":"Early diagnosis of dementia based on intersubject whole-brain dissimilarities","authors":"S. Klein, M. Loog, F. Lijn, T. Heijer, A. Hammers, Marleen de Bruijne, A. Lugt, R. Duin, M. Breteler, W. Niessen","doi":"10.1109/ISBI.2010.5490366","DOIUrl":"https://doi.org/10.1109/ISBI.2010.5490366","url":null,"abstract":"This article studies the possibility of detecting dementia in an early stage, using nonrigid registration of MR brain scans in combination with dissimilarity-based pattern recognition techniques. Instead of focussing on the shape of a single brain structure, we take into account the shape differences within the entire brain. Imaging data was obtained from a longitudinal, population based study of the elderly. A set of 29 subjects was identified, who were asymptomatic at the time of scanning, but were diagnosed as having dementia within 0.7 to 5 years after the scan, and a set of 29 age and gender matched healthy controls were selected. Each subject was registered to all other subjects, using a nonrigid registration algorithm. Based on statistics of the deformation field in the brain, a dissimilarity measure was calculated between each pair of subjects, yielding a 58×58 dissimilarity matrix. A kNN classifier was trained on the dissimilarity matrix and the performance was tested in a leave-one-out experiment. A classification accuracy of 81% was attained (spec. 83%, sens. 79%). This demonstrates the potential of whole-brain intersubject dissimilarities to aid in early diagnosis of dementia.","PeriodicalId":250523,"journal":{"name":"2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro","volume":"136 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-04-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"123696010","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 38
Automatic leakage detection and recovery for airway tree extraction in chest CT images 胸部CT图像气道树提取中的泄漏自动检测与恢复
Pub Date : 2010-04-14 DOI: 10.1109/ISBI.2010.5490282
M. Ceresa, X. Artaechevarria, A. Muñoz-Barrutia, C. Ortíz-de-Solórzano
Accurately extracting the airway tree is of utmost importance to correctly analyze CT images of the lungs. A survey of published methods reveals the existence of a trade-off between sensitivity -number of airway branches found- and accuracy -how much parenchymal leakage occurs-. In this paper, we present an algorithm for robust airway segmentation that attains both high sensitivity and accuracy. This is accomplished by using an initial permissive voxel acceptance criterion followed by early leakage detection and correction using a novel leakage recovery algorithm. Our algorithm was tested by comparing it to manual segmentation of a large and diverse image data-set.
准确提取气道树对于正确分析肺部CT图像至关重要。一项对已发表方法的调查显示,敏感性(发现气道分支的数量)和准确性(发生多少实质渗漏)之间存在权衡。本文提出了一种鲁棒气道分割算法,该算法具有较高的灵敏度和准确性。这是通过使用初始允许体素接受标准,然后使用新颖的泄漏恢复算法进行早期泄漏检测和校正来实现的。通过将我们的算法与大量不同图像数据集的人工分割进行比较,对其进行了测试。
{"title":"Automatic leakage detection and recovery for airway tree extraction in chest CT images","authors":"M. Ceresa, X. Artaechevarria, A. Muñoz-Barrutia, C. Ortíz-de-Solórzano","doi":"10.1109/ISBI.2010.5490282","DOIUrl":"https://doi.org/10.1109/ISBI.2010.5490282","url":null,"abstract":"Accurately extracting the airway tree is of utmost importance to correctly analyze CT images of the lungs. A survey of published methods reveals the existence of a trade-off between sensitivity -number of airway branches found- and accuracy -how much parenchymal leakage occurs-. In this paper, we present an algorithm for robust airway segmentation that attains both high sensitivity and accuracy. This is accomplished by using an initial permissive voxel acceptance criterion followed by early leakage detection and correction using a novel leakage recovery algorithm. Our algorithm was tested by comparing it to manual segmentation of a large and diverse image data-set.","PeriodicalId":250523,"journal":{"name":"2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro","volume":"10 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-04-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"123708416","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 4
AN iterative model-constrained graph-cut algorithm for Abdominal Aortic Aneurysm thrombus segmentation 腹主动脉瘤血栓分割的迭代模型约束图切算法
Pub Date : 2010-04-14 DOI: 10.1109/ISBI.2010.5490085
M. Freiman, S. Esses, Leo Joskowicz, J. Sosna
We present an iterative model-constrained graph-cut algorithm for the segmentation of Abdominal Aortic Aneurysm (AAA) thrombus. Given an initial segmentation of the aortic lumen, our method automatically segments the thrombus by iteratively coupling intensity-based graph min-cut segmentation and geometric parametric model fitting. The geometric model effectively constrains the graph min-cut segmentation from “leaking” to nearby veins and organs. Experimental results on 8 AAA CTA datasets yield robust segmentations of the AAA thrombus in 2 mins computer time with a mean absolute volume difference of 8.0% and mean volumetric overlap error of 12.9%, which is comparable to the interobserver error.
我们提出了一种迭代模型约束的图切算法,用于分割腹主动脉瘤(AAA)血栓。给定主动脉腔的初始分割,我们的方法通过迭代耦合基于强度的图最小切割分割和几何参数模型拟合来自动分割血栓。该几何模型有效地约束了图最小分割不“泄漏”到附近的静脉和器官。在8个AAA CTA数据集上的实验结果显示,在2分钟的计算机时间内对AAA血栓进行了稳健的分割,平均绝对体积差为8.0%,平均体积重叠误差为12.9%,与观察者间误差相当。
{"title":"AN iterative model-constrained graph-cut algorithm for Abdominal Aortic Aneurysm thrombus segmentation","authors":"M. Freiman, S. Esses, Leo Joskowicz, J. Sosna","doi":"10.1109/ISBI.2010.5490085","DOIUrl":"https://doi.org/10.1109/ISBI.2010.5490085","url":null,"abstract":"We present an iterative model-constrained graph-cut algorithm for the segmentation of Abdominal Aortic Aneurysm (AAA) thrombus. Given an initial segmentation of the aortic lumen, our method automatically segments the thrombus by iteratively coupling intensity-based graph min-cut segmentation and geometric parametric model fitting. The geometric model effectively constrains the graph min-cut segmentation from “leaking” to nearby veins and organs. Experimental results on 8 AAA CTA datasets yield robust segmentations of the AAA thrombus in 2 mins computer time with a mean absolute volume difference of 8.0% and mean volumetric overlap error of 12.9%, which is comparable to the interobserver error.","PeriodicalId":250523,"journal":{"name":"2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro","volume":"7 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-04-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"125434719","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 40
Cardiac left atrium CT image segmentation for ablation guidance 心脏左心房CT图像分割用于消融指导
Pub Date : 2010-04-14 DOI: 10.1109/ISBI.2010.5490304
Marc M. J. Koppert, P. Rongen, M. Prokop, B. H. Romeny, H. V. Assen
Catheter ablation is an increasingly important curative procedure for atrial fibrillation. Knowledge of the local wall thickness is essential to determine the proper ablation energy. This paper presents the first semi-automatic atrial wall thickness measurement method for ablation guidance. It includes both endocardial and epicardial atrial wall segmentation on CT image data. Segmentation is based on active contours, Otsu's multiple threshold method and hysteresis thresholding. Segmentation results were compared to contours manually drawn by two experts, using repeated measures analysis of variance. The root mean square differences between the semi-automatic and the manually drawn contours were comparable to intra-observer variation (endocardium: p = 0.23, epicardium: p = 0.18). Mean wall thickness difference is significant between one of the experts on one side, and the presented method and the other expert on the other side (p ≪ 0.001). Wall thicknesses found were in the range of 0.5–5.5mm, corresponding to values presented in literature.
导管消融是心房颤动日益重要的治疗手段。了解局部壁厚对于确定合适的烧蚀能量至关重要。提出了首个用于消融指导的半自动房壁厚度测量方法。它包括心内膜和心外膜在CT图像数据上的心房壁分割。分割基于活动轮廓、Otsu多阈值法和迟滞阈值法。分割结果与两位专家手工绘制的轮廓进行比较,采用重复测量方差分析。半自动和手动绘制轮廓的均方根差异与观察者内部差异相当(心内膜:p = 0.23,心外膜:p = 0.18)。一边的专家、所提出的方法和另一边的专家之间的平均壁厚差异是显著的(p≪0.001)。所发现的壁厚范围为0.5-5.5mm,与文献中给出的值相对应。
{"title":"Cardiac left atrium CT image segmentation for ablation guidance","authors":"Marc M. J. Koppert, P. Rongen, M. Prokop, B. H. Romeny, H. V. Assen","doi":"10.1109/ISBI.2010.5490304","DOIUrl":"https://doi.org/10.1109/ISBI.2010.5490304","url":null,"abstract":"Catheter ablation is an increasingly important curative procedure for atrial fibrillation. Knowledge of the local wall thickness is essential to determine the proper ablation energy. This paper presents the first semi-automatic atrial wall thickness measurement method for ablation guidance. It includes both endocardial and epicardial atrial wall segmentation on CT image data. Segmentation is based on active contours, Otsu's multiple threshold method and hysteresis thresholding. Segmentation results were compared to contours manually drawn by two experts, using repeated measures analysis of variance. The root mean square differences between the semi-automatic and the manually drawn contours were comparable to intra-observer variation (endocardium: p = 0.23, epicardium: p = 0.18). Mean wall thickness difference is significant between one of the experts on one side, and the presented method and the other expert on the other side (p ≪ 0.001). Wall thicknesses found were in the range of 0.5–5.5mm, corresponding to values presented in literature.","PeriodicalId":250523,"journal":{"name":"2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro","volume":"32 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-04-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"115200018","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 10
Generalized optimal quantitative index of dual-time FDG-PET imaging in lung cancer diagnosis 双时间FDG-PET成像诊断肺癌的广义最优定量指标
Pub Date : 2010-04-14 DOI: 10.1109/ISBI.2010.5490378
Xiujuan Zheng, Guangjian Tian, L. Wen, D. Feng
It has been recognized that dual-time FDG-PET imaging can facilitate the differentiation of malignancy from benign lesions for cancer diagnosis. However, dual-time imaging protocols with retention index (RI) as a criteria in the classification are usually defined empirically, which might lead to the low accuracy in differentiation. Recently, a new quantitative index (QI) has been proposed to improve diagnostic efficacy. In this paper, we propose a novel framework to derive generalized optimal QI and its associated optimal ranges of imaging protocol to further improve the performance of dual-time FDG-PET imaging in lung cancer diagnosis.
FDG-PET双时间显像有助于肿瘤良恶性的鉴别诊断。然而,以保留指数(RI)作为分类标准的双时间成像方案通常是经验定义的,这可能导致区分准确率低。近年来,人们提出了一种新的定量指标(QI)来提高诊断效果。在本文中,我们提出了一个新的框架来推导广义最佳QI及其相关的最佳成像方案范围,以进一步提高双时间FDG-PET成像在肺癌诊断中的性能。
{"title":"Generalized optimal quantitative index of dual-time FDG-PET imaging in lung cancer diagnosis","authors":"Xiujuan Zheng, Guangjian Tian, L. Wen, D. Feng","doi":"10.1109/ISBI.2010.5490378","DOIUrl":"https://doi.org/10.1109/ISBI.2010.5490378","url":null,"abstract":"It has been recognized that dual-time FDG-PET imaging can facilitate the differentiation of malignancy from benign lesions for cancer diagnosis. However, dual-time imaging protocols with retention index (RI) as a criteria in the classification are usually defined empirically, which might lead to the low accuracy in differentiation. Recently, a new quantitative index (QI) has been proposed to improve diagnostic efficacy. In this paper, we propose a novel framework to derive generalized optimal QI and its associated optimal ranges of imaging protocol to further improve the performance of dual-time FDG-PET imaging in lung cancer diagnosis.","PeriodicalId":250523,"journal":{"name":"2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro","volume":"21 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2010-04-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"116154617","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
期刊
2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1