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Lipids and NMR: More Than Mere Acquaintances 脂质和核磁共振:不仅仅是熟人
Pub Date : 2020-11-16 DOI: 10.32527/2020/101452
Cecilia Castro, J. Griffin
Recognising the paramount importance of lipids in cell physiology and function, there is an analytical need to measure the composition of lipids within the cell and how different lipid species interact. In this review, we will explore the role NMR spectroscopy can have in this. We will show how the technique can be used to measure lipid concentrations, but we will also provide evidences of its importance to characterise lipid interactions with other molecules, such as proteins, and to measure lipoproteins, the transporters of triglycerides and cholesterol, discussing advantages and limitations. Furthermore, we will highlight its potential for quality control analysis, particularly in food science and industry, if further development of benchtop instruments continues. Complementary to liquid chromatography mass spectrometry, which is able to measure numerous lipids in a complex mixture, NMR is an invaluable tool for fulfilling this need of better characterising lipids.
认识到脂质在细胞生理和功能中的至关重要性,有必要对细胞内脂质的组成以及不同脂质种类如何相互作用进行分析。在这篇综述中,我们将探讨核磁共振波谱在这方面的作用。我们将展示该技术如何用于测量脂质浓度,但我们也将提供其重要性的证据,以表征脂质与其他分子(如蛋白质)的相互作用,并测量脂蛋白(甘油三酯和胆固醇的转运蛋白),讨论其优缺点。此外,如果台式仪器的进一步发展继续下去,我们将强调其在质量控制分析方面的潜力,特别是在食品科学和工业领域。与液相色谱-质谱法(能够测量复杂混合物中的大量脂质)互补,NMR是满足更好地表征脂质需求的宝贵工具。
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引用次数: 0
Carboxylesterases: Pharmacological Inhibition Regulated Expression and Transcriptional Involvement of Nuclear Receptors and other Transcription Factors 羧酸酯酶:核受体和其他转录因子的药理学抑制调节表达和转录参与
Pub Date : 2019-11-20 DOI: 10.32527/2019/101435
Yuanjun Shen, Zhanquan Shi, B. Yan
Carboxylesterases (CESs, E.C.3.1.1.1) constitute a large class of enzymes that determine the therapeutic efficacy and toxicity of ester/amide drugs. Without exceptions, all mammalian species studied express multiple forms of carboxylesterases. Two human carboxylesterases, CES1 and CES2, are major contributors to hydrolytic biotransformation. Recent studies have identified therapeutic agents that potently inhibit carboxylesterases-based catalysis. Some of them are reversible whereas others irreversible. The adrenergic antagonist carvedilol, for example, reversibly inhibits CES2 but this carboxylesterase is irreversibly inhibited by orlistat, a popular anti-obesity medicine. Kinetically, the inhibition occurs competitively, non-competitively or in combination, depending on a carboxylesterase. For example, the calcium channel blocker diltiazem competitively inhibits CES1 but non-competitively inhibits CES2. In addition to inhibited catalysis, several therapeutic agents or disease mediators have been shown to regulate the expression of carboxylesterases. For example, the antiepileptic drug phenobarbital induces both human and rodent carboxylesterases, whereas the antibiotic rifampicin induces human carboxylesterases only. Conversely, the proinflammatory cytokine interleukin-6 (IL-6) suppresses the expression of carboxylesterases across species, but depending on the concentrations of glucose in the culture medium. Transactivation, transrepression and altered mRNA stability contribute to the regulated expression. Several nuclear receptors are established to support the regulation including constitutive androstane receptor, glucocorticoid receptor and pregnane X receptor. In addition, non-ligand transcription factors are also involved in the regulation and exemplified by differentiated embryo chondrocyte-1, nuclear factor (erythroid-derived 2)-like 2 and tumor protein p53. These transcription factors coordinate the regulated expression of carboxylesterases, constituting a regulatory network for the hydrolytic biotransformation.
羧酸酯酶(CESs, E.C.3.1.1.1)是一类决定酯/酰胺类药物治疗效果和毒性的酶。无一例外,所有被研究的哺乳动物都表达多种形式的羧酸酯酶。两种人类羧酸酯酶CES1和CES2是水解生物转化的主要贡献者。最近的研究已经确定了有效抑制羧酸酯酶催化的治疗剂。有些是可逆的,有些是不可逆的。例如,肾上腺素能拮抗剂卡维地洛可逆地抑制CES2,但这种羧酸酯酶被奥利司他(一种流行的抗肥胖药物)不可逆地抑制。动力学上,抑制发生竞争性,非竞争性或联合,取决于羧酸酯酶。例如,钙通道阻滞剂地尔硫卓竞争性抑制CES1,但非竞争性抑制CES2。除了抑制催化外,一些治疗药物或疾病介质已被证明可以调节羧酸酯酶的表达。例如,抗癫痫药物苯巴比妥能诱导人和啮齿动物的羧酸酯酶,而抗生素利福平只诱导人的羧酸酯酶。相反,促炎细胞因子白细胞介素-6 (IL-6)抑制不同物种间羧酸酯酶的表达,但这取决于培养基中葡萄糖的浓度。转激活、转抑制和mRNA稳定性的改变有助于调控表达。几个核受体被建立支持调控,包括构形雄甾受体、糖皮质激素受体和孕激素X受体。此外,非配体转录因子也参与调控,如分化胚胎软骨细胞1、核因子(红细胞衍生2)样2和肿瘤蛋白p53。这些转录因子协调羧酸酯酶的调控表达,构成水解生物转化的调控网络。
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引用次数: 8
SLICC 12 Criteria Are More Effectiveness than ACR 97 Score about Systemic Lupus Erythematosus Diagnosis SLICC 12诊断系统性红斑狼疮比acr97诊断更有效
Pub Date : 2019-09-11 DOI: 10.32527/2019/101440
Fabiana Almeida, G. Barros, A. Destefani
Introduction: Systemic lupus erythematosus (SLE) is a chronic, autoimmune disease wich variable symptoms affecting numerous organs and insidious onset of an unpredictable course, with episodes of activity and remission. The development of the disease is evaluated by a combination of clinical history, physical and laboratory tests to identify risk factors related to the stage or complications of the disease. The American College of Rheumatology (ACR 97) was the first to establish criteria for SLE classification. In 2012, The Systemic Lupus International Collaborating Clinics (SLICC 12) published a new set of criteria aimed at optimizing the classification of SLE. Objectives: Compare the criteria proposed by ACR 97 and SLICC 12 for the diagnosis of SLE and to gather information on clinical characteristics, diagnosis, and treatment. Methodology: Literature review, using the PubMed-NCBI database. The inclusion criteria were: articles published in the last five years; study in humans and selection by the direct relation with the selected theme. Results: SLICC 12 demonstrated a higher sensitivity diagnosed in reports compared with as ACR 97. Conclusion: We found that SLICC 12 is the classification criterion for SLE presenting the most excellent variety of laboratory, cutaneous, immunological and neuropsychiatric findings, allowing a better performance of the classification of patients with SLE and thus the early diagnosis of the disease.
简介:系统性红斑狼疮(SLE)是一种慢性自身免疫性疾病,其症状多变,影响多个器官,发病过程不可预测,有活动期和缓解期。通过结合临床病史、身体和实验室测试来评估疾病的发展,以确定与疾病分期或并发症相关的风险因素。美国风湿病学会(ACR97)是第一个建立SLE分类标准的机构。2012年,系统性狼疮国际合作诊所(SLICC12)发布了一套旨在优化SLE分类的新标准。目的:比较ACR97和SLICC12提出的SLE诊断标准,并收集有关临床特征、诊断和治疗的信息。方法:文献综述,使用PubMed NCBI数据库。入选标准为:过去五年发表的文章;在人类的研究中,选择与选择主题有直接关系。结果:SLICC12在报告中显示出比ACR97更高的敏感性。结论:SLIC-12是SLE的分类标准,在实验室、皮肤、免疫和神经精神方面表现最为出色,可以更好地对SLE患者进行分类,从而对疾病进行早期诊断。
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引用次数: 0
Intrinsic Disorder in Nuclear Receptor Amino Termini: From Investigational Challenge to Therapeutic Opportunity 核受体氨基Termini的内在障碍:从研究挑战到治疗机遇
Pub Date : 2019-06-29 DOI: 10.32527/2019/101417
R. Shamilov, B. Aneskievich
Epidermal keratinocytes form an effective renewable barrier to surface assaults and desiccation of underlying tissues through a tightly controlled program of regeneration and terminal differentiation which is significantly impacted by the activity of several members of the nuclear receptor (NR) superfamily. As such, there is significant interest in physiological and pharmacological control of select NRs. NRs are usually considered quintessential examples of constrained structure-function relationships among protein families because of amino acid identity and sequence subserving physical requirements inherent to a relatively centrally-located DNA-binding domain and carboxyl-terminal ligand-recognition domain which together lead to agonist-activated gene expression. Nevertheless, across the superfamily the amino terminus of many NR is an often-critical contributor in degree of receptor-dependent transcriptional activity despite little in apparent sequence similarity that might be instructive in understanding this ability. By looking beyond shared strict amino acid sequence identity, a number of investigations are revealing the “unstructured"-function consequences of this disparity. Significant correlations between in silico and in vitro biophysical assessments are highlighting the shared trait of the unstructured nature or intrinsic disorder (ID) of NR amino termini and related functional consequences. Rather than the limited protein sequence variation-on-a-theme seen for zinc fingers (DNA binding) or a hydrophobic pocket (ligand binding), these amino-termini show sequence order diversity but often strikingly shared amino acid composition profiles not supporting a one-sequence–one-structure conformation. In this review, we look to integrate amino-termini ID reported in the literature, or predicted here, for select keratinocyte-expressed NR. As evidenced by success in drug targeting the amino-terminus of the androgen receptor, increased appreciation of amino-termini structure - or unstructure - might provide better understanding of NR function in general and possible future investigations on pharmacologic control over keratinocyte regeneration and/or differentiation.
表皮角质形成细胞通过严格控制的再生和终末分化程序,形成对底层组织的表面攻击和干燥的有效可再生屏障,这受到核受体(NR)超家族几个成员活性的显著影响。因此,人们对选择性NRs的生理和药理学控制非常感兴趣。NRs通常被认为是蛋白质家族之间受约束的结构-功能关系的典型例子,因为相对位于中心的DNA结合结构域和羧基末端配体识别结构域所固有的氨基酸同一性和序列服从物理要求,它们共同导致激动剂激活的基因表达。然而,在整个超家族中,许多NR的氨基末端通常是受体依赖性转录活性程度的关键贡献者,尽管在明显的序列相似性方面几乎没有,这可能对理解这种能力有指导意义。通过超越共享的严格氨基酸序列同一性,许多研究揭示了这种差异的“非结构化”功能后果。计算机和体外生物物理评估之间的显著相关性突出了非结构化性质或内在障碍(ID)的共同特征NR氨基末端和相关功能后果。与锌指(DNA结合)或疏水袋(配体结合)所见的有限的蛋白质序列变化不同,这些氨基末端显示出序列顺序的多样性,但通常惊人地共享氨基酸组成谱,不支持单一序列-单一结构构象。在这篇综述中,我们希望整合文献中报道的或本文预测的用于选择角质形成细胞表达的NR的氨基末端ID。如药物靶向雄激素受体氨基末端的成功所证明的,对氨基末端结构(或非结构)的增加理解可能提供对NR功能的总体更好理解,以及对角质形成细胞再生和/或分化的药理学控制的可能的未来研究。
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引用次数: 3
Ligand-Induced Allosteric Effects Governing SR Signaling 配体诱导的SR信号变构效应
Pub Date : 2019-04-04 DOI: 10.32527/2019/101382
C. Okafor, J. K. Colucci, E. Ortlund
Steroid receptors (SRs) are a class of ligand-regulated transcription factors that regulate gene expression in response to the binding of steroid hormones. Ligand binding drives conformational changes within the SR ligand binding domain that alters the receptors' affinity for coregulator proteins that in turn modulate chromatin state and either promote or block the recruitment of transcriptional machinery to a gene. Structural characterizations of SRs have provided insight into how these conformational rearrangements modulate receptor function, including signaling between the ligand binding pocket and the site of coregulator binding. Here, we review some of the proposed structural mechanisms put forward to explain the ability of ligands to modulate SR function. We also provide a discussion on computational methods that have contributed to the elucidation of SR allosteric regulation. Finally, we consider broader discussions of allostery within the SR family, such as receptor-induced reverse allostery and allosteric binding sites located outside of the canonical ligand interaction site.
甾体受体(SRs)是一类配体调节的转录因子,在类固醇激素的结合下调节基因表达。配体结合驱动SR配体结合区域内的构象变化,改变受体对共调节蛋白的亲和力,进而调节染色质状态,促进或阻断转录机制对基因的募集。SRs的结构特征揭示了这些构象重排如何调节受体功能,包括配体结合袋和共调节剂结合位点之间的信号传导。在这里,我们回顾了一些提出的结构机制,以解释配体调节SR功能的能力。我们还提供了计算方法的讨论,有助于阐明SR变构调节。最后,我们考虑了SR家族中更广泛的变构讨论,例如受体诱导的反向变构和位于规范配体相互作用位点之外的变构结合位点。
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引用次数: 8
Well. From Artificial Intelligence to Empathy? 好。从人工智能到移情?
Pub Date : 2019-03-30 DOI: 10.32527/2019/101436
P. Devchand
One might imagine nuclear hormone receptor signaling systems as internal machines that continuously monitor every aspect of our lives. They intelligently adapt to our environments in ways we have yet to fully understand. When things go awry we describe it as maladaptive or dysregulated; and if persistent then over time we invoke a disease, disorder or simply aging. For centuries, humans have strived for health by using traditional aides like diet, exercise, sleep, temperature and drugs. In today’s medicine, we are creating external machines to intelligently monitor, interpret and sometimes mimic our internal biology.We want to understandwhatmakes us tick, sowe aim formachines that will consume personal and big data.
有人可能会把核激素受体信号系统想象成持续监控我们生活方方面面的内部机器。它们以我们尚未完全理解的方式智能地适应我们的环境。当事情出错时,我们将其描述为适应不良或失调;如果持续下去,那么随着时间的推移,我们就会引发疾病,紊乱或衰老。几个世纪以来,人类一直通过饮食、运动、睡眠、体温和药物等传统的辅助手段来争取健康。在今天的医学中,我们正在创造外部机器来智能地监测、解释,有时甚至模仿我们的内部生物学。我们想了解是什么让我们做出选择,一些人瞄准了将消费个人数据和大数据的机器。
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引用次数: 0
The Role of Mineralocorticoid Receptor Signaling in Genitourinary Cancers 矿化皮质激素受体信号在泌尿生殖系统癌中的作用
Pub Date : 2019-02-24 DOI: 10.32527/2019/101410
Y. Nagata, T. Goto, H. Miyamoto
A steroid hormone receptor, mineralocorticoid receptor (MR), is well known to play a critical role in maintaining normal homeostasis in the body primarily via regulating ionic and water transports. Indeed, MR antagonists have been prescribed to the patients as diuretic drugs. Meanwhile, emerging evidence has indicated that MR signaling, with or without functional interplay with glucocorticoid receptor or androgen receptor, contributes to modulating the development and progression of several types of neoplasms including genitourinary malignancies. This review summarizes the available data suggesting the involvement of MR signaling in renal cell carcinoma, prostatic adenocarcinoma, urothelial carcinoma, and other malignancies, and highlights potential underlying molecular mechanisms.
矿物皮质激素受体(MR)是一种类固醇激素受体,主要通过调节离子和水的运输,在维持体内正常稳态中发挥关键作用。事实上,MR拮抗剂已经作为利尿剂开给患者。同时,新出现的证据表明,无论是否与糖皮质激素受体或雄激素受体功能相互作用,MR信号都有助于调节包括泌尿生殖系统恶性肿瘤在内的几种肿瘤的发生和进展。本文综述了磁共振信号在肾细胞癌、前列腺腺癌、尿路上皮癌和其他恶性肿瘤中的作用,并强调了其潜在的分子机制。
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引用次数: 2
Phase 0 of the Xenobiotic Response: Nuclear Receptors and Other Transcription Factors as a First Step in Protection from Xenobiotics. 异种免疫反应的0期:核受体和其他转录因子作为保护免受异种免疫的第一步。
Pub Date : 2019-01-01 Epub Date: 2019-11-20 DOI: 10.32527/2019/101447
William S Baldwin

This mini-review examines the crucial importance of transcription factors as a first line of defense in the detoxication of xenobiotics. Key transcription factors that recognize xenobiotics or xenobiotic-induced stress such as reactive oxygen species (ROS), include AhR, PXR, CAR, MTF, Nrf2, NF-κB, and AP-1. These transcription factors constitute a significant portion of the pathways induced by toxicants as they regulate phase I-III detoxication enzymes and transporters as well as other protective proteins such as heat shock proteins, chaperones, and anti-oxidants. Because they are often the first line of defense and induce phase I-III metabolism, could these transcription factors be considered the phase 0 of xenobiotic response?

这篇小型综述探讨了转录因子作为外源性物质解毒的第一道防线的至关重要性。识别外源性物质或外源性诱导应激(如活性氧)的关键转录因子包括AhR、PXR、CAR、MTF、Nrf2、NF-κB和AP-1。这些转录因子构成了毒物诱导的途径的重要组成部分,因为它们调节I-III期解毒酶和转运蛋白以及其他保护蛋白,如热休克蛋白、伴侣蛋白和抗氧化剂。因为它们通常是第一道防线,并诱导I-III期代谢,这些转录因子是否可以被认为是异生体反应的0期?
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引用次数: 0
Functional Characterization of a Novel Variant of the Constitutive Androstane Receptor (CAR, NR1I3) 组成型雄激素受体新变体(CAR,NR1I3)的功能表征
Pub Date : 2018-10-20 DOI: 10.32527/2018/101386
V. Prantner, Y. Cinnamon, Jenni Küblbeck, Ferdinand Molnár, P. Honkakoski
The nuclear receptor constitutive androstane receptor (CAR; NR1I3) controls the inducible expression of many enzymes and transporters involved in drug metabolism and transport, energy metabolism and toxicity. Single nucleotide variants of CAR are quite rare and usually associated with changes in pharmacokinetics of therapeutic drugs. Recently, a non-synonymous variant (F243S in the wild-type CAR) has been linked to the Kleefstra syndrome (MIM 610253) affecting neurological development. We identified another, previously unknown CAR variant (I281T) in a patient suffering from Kleefstra-like symptoms. Detailed reporter gene assays and molecular modelling indicated that the I281T mutation decreases the ability of CAR to recruit co-activators, likely by interfering with the assembly of functional CAR/retinoid X receptor (RXR) heterodimers. Although the I281T variant does not seem to cause the features of the patient, the present study adds to our knowledge about CAR function.
核受体组成型雄烷受体(CAR;NR1I3)控制许多参与药物代谢和运输、能量代谢和毒性的酶和转运体的诱导表达。CAR的单核苷酸变异非常罕见,通常与治疗药物的药代动力学变化有关。最近,一种非同义变体(野生型CAR中的F243S)与影响神经发育的Kleefstra综合征(MIM 610253)有关。我们在患有克利夫特拉样症状的患者中发现了另一种以前未知的CAR变体(I281T)。详细的报告基因分析和分子模型表明,I281T突变降低了CAR招募共激活剂的能力,可能是通过干扰功能性CAR/类视黄醛X受体(RXR)异源二聚体的组装。尽管I281T变异似乎不会导致患者的这些特征,但目前的研究增加了我们对CAR功能的了解。
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引用次数: 0
Physiology and Pathophysiology of PPARs in the Eye 眼内ppar的生理学和病理生理学
Pub Date : 2018-07-08 DOI: 10.11131/2018/101370
V. Castelli, M. d’Angelo, A. Antonosante, M. Catanesi, E. Benedetti, G. Desideri, A. Cimini
Peroxisome proliferator-activated receptor (PPARs) are ligand-activated transcription factors that exert significant roles in the control of multiple physiological processes. The last decade has shown an increasing interest in the role played by the agonists of PPARs in anti-inflammatory, anti-angiogenic, anti-fibrotic effects and in modulating oxidative stress response in different organs. Since the pathologic mechanisms of the majority of the blinding diseases, such as diabetic retinopathy (DR), age-related macular degeneration (AMD), glaucoma and optic neuropathy (ON), often involve neo-angiogenesis, inflammation and oxidative stress-mediated cell death, evidences are accumulating on the potential benefits of PPAR modulation to prevent or ameliorate eye pathologies. In this review, we focused on the description of what is known about the role of PPARs in the ocular pathophysiological processes and on PPARs agonists as innovative adjuvants in the treatment of ocular diseases.
过氧化物酶体增殖体激活受体(PPARs)是配体激活的转录因子,在多种生理过程的调控中发挥重要作用。近十年来,人们对PPARs激动剂在抗炎、抗血管生成、抗纤维化和调节不同器官氧化应激反应中的作用越来越感兴趣。由于大多数致盲疾病的病理机制,如糖尿病视网膜病变(DR)、年龄相关性黄斑变性(AMD)、青光眼和视神经病变(ON),往往涉及新血管生成、炎症和氧化应激介导的细胞死亡,越来越多的证据表明PPAR调节在预防或改善眼部病变方面的潜在益处。在这篇综述中,我们重点介绍了ppar在眼部病理生理过程中的已知作用,以及ppar激动剂作为眼部疾病治疗中的创新佐剂。
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引用次数: 4
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Nuclear Receptor Research
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