首页 > 最新文献

European Journal of Medicinal Chemistry最新文献

英文 中文
Design, synthesis, and neuroprotective evaluation of chiral butylphthalide-ligustrazine hybrids via the Keap1-Nrf2 pathway in ischemic stroke 通过Keap1-Nrf2通路手性丁苯酞-川芎嗪杂合体在缺血性卒中中的设计、合成和神经保护作用评价
IF 5.9 2区 医学 Q1 CHEMISTRY, MEDICINAL Pub Date : 2025-12-02 DOI: 10.1016/j.ejmech.2025.118438
Chenwei Zuo , Haochen Xie , Haoyue Shen, Jiaxin Wang, Guangyu Li, Quanxing Hou, Guibo Sun, Yu Tian
As a racemate, 3-n-butylphthalide (NBP) can be separated into its S- and R-enantiomers, with S-NBP reported to exhibit superior bioactivity. To develop more potent anti-stroke agents with enhanced bioavailability, we therefore employed S-NBP as the lead compound. Through structural modification and hybridization with ligustrazine (TMP), 20 novel S-NBP-TMP hybrids were designed and synthesized. In vitro screening for neuroprotection using OGD/R-injured HT22 cells and primary hippocampal neurons identified compounds S8g, S8h, and S8i. At 12.5 μM, these compounds significantly enhanced cell viability recovery compared to both their racemates and NBP. Among them, S8i exhibited the most potent neuroprotective activity, outperforming even S-NBP. Subsequent mechanistic studies demonstrated that S8i effectively attenuated OGD/R-induced mitochondrial damage and oxidative stress, while also reducing both neuronal apoptosis and necrosis. Molecular docking revealed that S8i effectively occupies the Keap1 binding pocket for Nrf2 and forms four hydrogen bonds with Arg380, Arg415, and Ser555. Moreover, S8i exhibits favorable BBB permeability, as its Pe value (21.95 × 10−6 cm/s) significantly exceeds the penetration threshold. In vivo studies demonstrated that S8i ameliorated cerebral ischemia-reperfusion injury, restored cerebral blood flow, and protected cerebral vasculature in MCAO/R model mice. Furthermore, at doses of 30 and 60 mg/kg, S8i exhibited significantly superior efficacy to NBP (90 mg/kg). Additionally, S8i downregulated Keap1 expression and upregulated the expression of Nrf2 and its downstream factors, HO-1 and NQO-1 in vivo. In summary, S8i demonstrates significantly enhanced neuroprotection versus its racemate, NBP, and S-NBP, positioning it as a highly promising lead compound for ischemic stroke therapy.
作为一种外消旋体,3-正丁苯酞(NBP)可以分离成S-和r -对映体,其中S-NBP具有较好的生物活性。为了开发更有效的抗脑卒中药物,提高生物利用度,我们采用S-NBP作为先导化合物。通过结构修饰和与川芎嗪(川芎嗪)杂交,设计合成了20个新型S-NBP-TMP杂交种。利用OGD/ r损伤的HT22细胞和海马原代神经元进行体外神经保护筛选,鉴定出化合物S8g、S8h和S8i。在12.5 μM下,与外消旋体和NBP相比,这些化合物显著提高了细胞活力恢复。其中,S8i表现出最强的神经保护活性,甚至优于S-NBP。随后的机制研究表明,S8i能有效减轻OGD/ r诱导的线粒体损伤和氧化应激,同时也能减少神经元凋亡和坏死。分子对接发现S8i有效占据了Nrf2的Keap1结合袋,并与Arg380、Arg415和Ser555形成4个氢键。此外,S8i的Pe值(21.95 × 10−6 cm/s)明显超过穿透阈值,表现出良好的血脑屏障渗透率。体内研究表明,S8i可改善MCAO/R模型小鼠脑缺血再灌注损伤,恢复脑血流,保护脑血管。此外,在剂量为30和60 mg/kg时,S8i的效果明显优于NBP (90 mg/kg)。此外,S8i在体内下调Keap1的表达,上调Nrf2及其下游因子HO-1和NQO-1的表达。综上所述,S8i与其外消旋体、NBP和S-NBP相比,显示出显著增强的神经保护作用,使其成为一种非常有前景的缺血性卒中治疗先导化合物。
{"title":"Design, synthesis, and neuroprotective evaluation of chiral butylphthalide-ligustrazine hybrids via the Keap1-Nrf2 pathway in ischemic stroke","authors":"Chenwei Zuo ,&nbsp;Haochen Xie ,&nbsp;Haoyue Shen,&nbsp;Jiaxin Wang,&nbsp;Guangyu Li,&nbsp;Quanxing Hou,&nbsp;Guibo Sun,&nbsp;Yu Tian","doi":"10.1016/j.ejmech.2025.118438","DOIUrl":"10.1016/j.ejmech.2025.118438","url":null,"abstract":"<div><div>As a racemate, 3-<em>n</em>-butylphthalide (<strong>NBP</strong>) can be separated into its <em>S</em>- and <em>R</em>-enantiomers, with <strong><em>S</em>-NBP</strong> reported to exhibit superior bioactivity. To develop more potent anti-stroke agents with enhanced bioavailability, we therefore employed <strong><em>S</em>-NBP</strong> as the lead compound. Through structural modification and hybridization with ligustrazine (<strong>TMP</strong>), 20 novel <em>S</em>-NBP-TMP hybrids were designed and synthesized. <em>In vitro</em> screening for neuroprotection using OGD/R-injured HT22 cells and primary hippocampal neurons identified compounds <strong>S8g</strong>, <strong>S8h</strong>, and <strong>S8i</strong>. At 12.5 μM, these compounds significantly enhanced cell viability recovery compared to both their racemates and <strong>NBP</strong>. Among them, <strong>S8i</strong> exhibited the most potent neuroprotective activity, outperforming even <strong><em>S</em>-NBP</strong>. Subsequent mechanistic studies demonstrated that <strong>S8i</strong> effectively attenuated OGD/R-induced mitochondrial damage and oxidative stress, while also reducing both neuronal apoptosis and necrosis. Molecular docking revealed that <strong>S8i</strong> effectively occupies the Keap1 binding pocket for Nrf2 and forms four hydrogen bonds with Arg380, Arg415, and Ser555. Moreover, <strong>S8i</strong> exhibits favorable BBB permeability, as its <em>Pe</em> value (21.95 × 10<sup>−6</sup> cm/s) significantly exceeds the penetration threshold. <em>In vivo</em> studies demonstrated that <strong>S8i</strong> ameliorated cerebral ischemia-reperfusion injury, restored cerebral blood flow, and protected cerebral vasculature in MCAO/R model mice. Furthermore, at doses of 30 and 60 mg/kg, <strong>S8i</strong> exhibited significantly superior efficacy to <strong>NBP</strong> (90 mg/kg). Additionally, <strong>S8i</strong> downregulated Keap1 expression and upregulated the expression of Nrf2 and its downstream factors, HO-1 and NQO-1 <em>in vivo</em>. In summary, <strong>S8i</strong> demonstrates significantly enhanced neuroprotection versus its racemate, <strong>NBP</strong>, and <strong><em>S</em>-NBP</strong>, positioning it as a highly promising lead compound for ischemic stroke therapy.</div></div>","PeriodicalId":314,"journal":{"name":"European Journal of Medicinal Chemistry","volume":"303 ","pages":"Article 118438"},"PeriodicalIF":5.9,"publicationDate":"2025-12-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145657638","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Natural and synthetic compounds targeting ferroptosis in esophageal squamous cell carcinoma: Research progress and application potential 靶向食管鳞状细胞癌铁下垂的天然及合成化合物的研究进展及应用前景
IF 5.9 2区 医学 Q1 CHEMISTRY, MEDICINAL Pub Date : 2025-12-02 DOI: 10.1016/j.ejmech.2025.118448
Nana Wu , Guanhua Wang , Jinnuo Wang , Meixuan Wu , Xian Wang , Junting Ma , Wei He
Esophageal Squamous Cell Carcinoma (ESCC) is a prevalent malignant tumor of the human digestive system, characterized by high incidence and mortality rates. Most patients are diagnosed at advanced stages, marked by metastasis and drug resistance, significantly limit the efficacy of conventional therapies. Ferroptosis, an iron-dependent form of regulated cell death driven by dysregulated iron metabolism, lipid peroxidation, and compromised antioxidant defense system, has shown great potential in inhibiting the biological activity of cancer cells and improving prognosis. Thus, inducing ferroptosis could become a promising approach for cancer treatment. Bioactive small‐molecule compounds, both natural and synthetic, offer unique advantages in the treatment of ESCC due to their distinct properties and potential efficacy. Modulating tumor cells survival via ferroptosis—whether through natural or synthetic agents—represents a crucial direction for precision ESCC therapy. In this review, we systematically outline the core mechanisms of ferroptosis and the roles of ferroptosis in ESCC. We also summarize a range of natural and synthetic compounds that target ferroptosis in ESCC cells, discussing their mechanisms of action and therapeutic potential. This review demonstrates that targeting ferroptosis with natural and synthetic compounds could be effective for ESCC treatments, and highlights a promising therapeutic avenue that could be utilized to prevent ESCC. This review article aims to shed light on developing novel therapeutic regimens by pharmacological induction of ferroptosis to treat ESCC efficiently in the future.
食管鳞状细胞癌(ESCC)是人类消化系统常见的恶性肿瘤,具有高发病率和高死亡率的特点。大多数患者被诊断为晚期,以转移和耐药为特征,大大限制了传统治疗的疗效。铁死亡是一种铁依赖性的细胞死亡形式,由铁代谢失调、脂质过氧化和抗氧化防御系统受损驱动,在抑制癌细胞的生物活性和改善预后方面显示出巨大的潜力。因此,诱导铁下垂可能成为一种很有前途的癌症治疗方法。生物活性小分子化合物,无论是天然的还是合成的,由于其独特的性质和潜在的功效,在ESCC的治疗中具有独特的优势。无论是通过天然的还是人工合成的药物,通过凋亡调节肿瘤细胞的存活是ESCC精确治疗的一个重要方向。在这篇综述中,我们系统地概述了铁下垂的核心机制以及铁下垂在ESCC中的作用。我们还总结了一系列针对ESCC细胞铁下垂的天然和合成化合物,讨论了它们的作用机制和治疗潜力。本文综述了以铁下垂为靶点的天然和合成化合物可有效治疗ESCC,并强调了一种有前途的治疗途径,可用于预防ESCC。本文旨在探讨通过药物诱导铁下垂治疗ESCC的新方案。
{"title":"Natural and synthetic compounds targeting ferroptosis in esophageal squamous cell carcinoma: Research progress and application potential","authors":"Nana Wu ,&nbsp;Guanhua Wang ,&nbsp;Jinnuo Wang ,&nbsp;Meixuan Wu ,&nbsp;Xian Wang ,&nbsp;Junting Ma ,&nbsp;Wei He","doi":"10.1016/j.ejmech.2025.118448","DOIUrl":"10.1016/j.ejmech.2025.118448","url":null,"abstract":"<div><div>Esophageal Squamous Cell Carcinoma (ESCC) is a prevalent malignant tumor of the human digestive system, characterized by high incidence and mortality rates. Most patients are diagnosed at advanced stages, marked by metastasis and drug resistance, significantly limit the efficacy of conventional therapies. Ferroptosis, an iron-dependent form of regulated cell death driven by dysregulated iron metabolism, lipid peroxidation, and compromised antioxidant defense system, has shown great potential in inhibiting the biological activity of cancer cells and improving prognosis. Thus, inducing ferroptosis could become a promising approach for cancer treatment. Bioactive small‐molecule compounds, both natural and synthetic, offer unique advantages in the treatment of ESCC due to their distinct properties and potential efficacy. Modulating tumor cells survival via ferroptosis—whether through natural or synthetic agents—represents a crucial direction for precision ESCC therapy. In this review, we systematically outline the core mechanisms of ferroptosis and the roles of ferroptosis in ESCC. We also summarize a range of natural and synthetic compounds that target ferroptosis in ESCC cells, discussing their mechanisms of action and therapeutic potential. This review demonstrates that targeting ferroptosis with natural and synthetic compounds could be effective for ESCC treatments, and highlights a promising therapeutic avenue that could be utilized to prevent ESCC. This review article aims to shed light on developing novel therapeutic regimens by pharmacological induction of ferroptosis to treat ESCC efficiently in the future.</div></div>","PeriodicalId":314,"journal":{"name":"European Journal of Medicinal Chemistry","volume":"303 ","pages":"Article 118448"},"PeriodicalIF":5.9,"publicationDate":"2025-12-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145657654","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Design of conditional and tumor-activated PROTACs for selective degradation in lung cancer 条件和肿瘤激活PROTACs在肺癌中选择性降解的设计
IF 5.9 2区 医学 Q1 CHEMISTRY, MEDICINAL Pub Date : 2025-12-01 DOI: 10.1016/j.ejmech.2025.118432
Lin Lin , Fushuang Zheng , Hongyi Wei , Xiaojie Wu , Hengyi Yan , Yuanyuan Ding
Lung cancer remains the leading cause of cancer-related mortality worldwide, with limited therapeutic options for patients harboring drug-resistant or undruggable targets. PROteolysis TArgeting Chimeras (PROTACs) have emerged as a promising strategy to selectively degrade oncogenic drivers; however, their clinical translation is hampered by systemic toxicity, off-target effects, and poor pharmacokinetics. To address these limitations, conditional and tumor-activated PROTACs have been developed, enabling spatiotemporal control of protein degradation within the tumor microenvironment. Recent advances include light-responsive PROTACs, glutathione- and ROS-activated degraders, enzyme-cleavable linkers, and nanocarrier-based prodrugs that enhance tumor selectivity. In lung cancer, these strategies show particular promise against KRAS, EGFR, and SMARCA2/4-driven malignancies, while also offering synergy with immunotherapy and chemotherapy. This review highlights current design principles, emerging applications, and future perspectives for conditional and tumor-activated PROTACs, underscoring their transformative potential in precision oncology.
肺癌仍然是世界范围内癌症相关死亡的主要原因,对具有耐药或不可药靶点的患者的治疗选择有限。靶向嵌合体(PROteolysis TArgeting Chimeras, PROTACs)已成为一种有前途的选择性降解致癌驱动因子的策略;然而,它们的临床转化受到全身毒性、脱靶效应和不良药代动力学的阻碍。为了解决这些限制,条件和肿瘤激活的PROTACs已经被开发出来,能够在肿瘤微环境中对蛋白质降解进行时空控制。最近的进展包括光响应性PROTACs、谷胱甘肽和ros激活的降解物、酶可切割连接物和基于纳米载体的前药,它们可以增强肿瘤的选择性。在肺癌中,这些策略对KRAS、EGFR和smarca2 /4驱动的恶性肿瘤表现出特别的希望,同时也与免疫治疗和化疗协同作用。本文综述了条件和肿瘤激活PROTACs的当前设计原则、新兴应用和未来前景,强调了它们在精确肿瘤学中的变革潜力。
{"title":"Design of conditional and tumor-activated PROTACs for selective degradation in lung cancer","authors":"Lin Lin ,&nbsp;Fushuang Zheng ,&nbsp;Hongyi Wei ,&nbsp;Xiaojie Wu ,&nbsp;Hengyi Yan ,&nbsp;Yuanyuan Ding","doi":"10.1016/j.ejmech.2025.118432","DOIUrl":"10.1016/j.ejmech.2025.118432","url":null,"abstract":"<div><div>Lung cancer remains the leading cause of cancer-related mortality worldwide, with limited therapeutic options for patients harboring drug-resistant or undruggable targets. PROteolysis TArgeting Chimeras (PROTACs) have emerged as a promising strategy to selectively degrade oncogenic drivers; however, their clinical translation is hampered by systemic toxicity, off-target effects, and poor pharmacokinetics. To address these limitations, conditional and tumor-activated PROTACs have been developed, enabling spatiotemporal control of protein degradation within the tumor microenvironment. Recent advances include light-responsive PROTACs, glutathione- and ROS-activated degraders, enzyme-cleavable linkers, and nanocarrier-based prodrugs that enhance tumor selectivity. In lung cancer, these strategies show particular promise against KRAS, EGFR, and SMARCA2/4-driven malignancies, while also offering synergy with immunotherapy and chemotherapy. This review highlights current design principles, emerging applications, and future perspectives for conditional and tumor-activated PROTACs, underscoring their transformative potential in precision oncology.</div></div>","PeriodicalId":314,"journal":{"name":"European Journal of Medicinal Chemistry","volume":"303 ","pages":"Article 118432"},"PeriodicalIF":5.9,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145651302","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Discovery of Novel Pyrrolidine-2,5-dione Scaffold PICK1 PDZ Inhibitors as Anti-ischemic Stroke Agents 新型吡咯烷-2,5-二酮支架PICK1 PDZ抑制剂抗缺血性卒中药物的发现
IF 6.7 2区 医学 Q1 CHEMISTRY, MEDICINAL Pub Date : 2025-12-01 DOI: 10.1016/j.ejmech.2025.118410
Yichen Jiang, Qi Liu, Ting Zhu, Ruiguo Liang, Yujiao Qin, Xiya Guo, Jiacheng Wang, Ping Li, Jie Zhou, Han Ju, Mingxin Dong
Targeting PICK1 presents a promising therapeutic strategy for ischemic stroke. Through multi-level virtual screening, we identified a pyrrolidin-2-one-based hit 3a. Its optimized derivative, 6b, demonstrated potent PICK1 PDZ binding affinity (Ki = 27.73 μM) and robust neuroprotection in glutamate-induced HT22 cell and primary neuron models, improving cell survival. Mechanistically, 6b attenuated ROS production and significantly modulated apoptosis-related proteins, downregulating the levels of pro-apoptotic factors Caspase-3 and Bax, while upregulating the anti-apoptotic protein Bcl-2. Critically, siRNA-mediated knockdown of PICK1 completely abolished the neuroprotective effects of 6b, confirming that its action is explicitly mediated through PICK1 inhibition. Furthermore, 6b exhibited high membrane permeability and, in a middle cerebral artery occlusion model, significantly reduced the cerebral infarct area by 32.51%. Collectively, our findings underscore compound 6b as a highly promising, novel neuroprotective agent for ischemic stroke treatment.
靶向PICK1是缺血性脑卒中的一种有前景的治疗策略。通过多级虚拟筛选,我们确定了一个基于吡咯烷-2- 1的hit 3a。其优化后的衍生物6b在谷氨酸诱导的HT22细胞和原代神经元模型中显示出强大的PICK1 PDZ结合亲和力(Ki = 27.73 μM)和强大的神经保护作用,提高了细胞存活率。从机制上讲,6b可以减弱ROS的产生,并显著调节凋亡相关蛋白,下调促凋亡因子Caspase-3和Bax的水平,同时上调抗凋亡蛋白Bcl-2。重要的是,sirna介导的PICK1敲低完全消除了6b的神经保护作用,证实其作用是通过PICK1抑制明确介导的。此外,6b表现出高膜通透性,在大脑中动脉闭塞模型中,显著减少脑梗死面积32.51%。总的来说,我们的研究结果强调了化合物6b作为一种非常有前途的新型缺血性卒中治疗神经保护剂。
{"title":"Discovery of Novel Pyrrolidine-2,5-dione Scaffold PICK1 PDZ Inhibitors as Anti-ischemic Stroke Agents","authors":"Yichen Jiang, Qi Liu, Ting Zhu, Ruiguo Liang, Yujiao Qin, Xiya Guo, Jiacheng Wang, Ping Li, Jie Zhou, Han Ju, Mingxin Dong","doi":"10.1016/j.ejmech.2025.118410","DOIUrl":"https://doi.org/10.1016/j.ejmech.2025.118410","url":null,"abstract":"Targeting PICK1 presents a promising therapeutic strategy for ischemic stroke. Through multi-level virtual screening, we identified a pyrrolidin-2-one-based hit <strong>3a</strong>. Its optimized derivative, <strong>6b</strong>, demonstrated potent PICK1 PDZ binding affinity (<em>K</em><sub>i</sub> = 27.73 μM) and robust neuroprotection in glutamate-induced HT22 cell and primary neuron models, improving cell survival. Mechanistically, <strong>6b</strong> attenuated ROS production and significantly modulated apoptosis-related proteins, downregulating the levels of pro-apoptotic factors Caspase-3 and Bax, while upregulating the anti-apoptotic protein Bcl-2. Critically, siRNA-mediated knockdown of PICK1 completely abolished the neuroprotective effects of <strong>6b</strong>, confirming that its action is explicitly mediated through PICK1 inhibition. Furthermore, <strong>6b</strong> exhibited high membrane permeability and, in a middle cerebral artery occlusion model, significantly reduced the cerebral infarct area by 32.51%. Collectively, our findings underscore compound <strong>6b</strong> as a highly promising, novel neuroprotective agent for ischemic stroke treatment.","PeriodicalId":314,"journal":{"name":"European Journal of Medicinal Chemistry","volume":"26 1","pages":""},"PeriodicalIF":6.7,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145651301","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Synthesis and discovery of guaianolide ‐ eudesmanolide heterodimers as CDK2 inhibitors for the treatment of hepatocellular carcinoma 愈创木酚内酯异源二聚体作为CDK2抑制剂治疗肝癌的合成和发现
IF 5.9 2区 医学 Q1 CHEMISTRY, MEDICINAL Pub Date : 2025-12-01 DOI: 10.1016/j.ejmech.2025.118412
Tian-Ze Li , Feng-Jiao Li , Min-Min Hu , Feng-Dan Huang , Yun-Bao Ma , Yao Yang , Yong-Cui Wang , Ji-Jun Chen
Hepatocellular carcinoma (HCC) remains a leading cause of cancer-related death, creating an urgent need for novel therapeutic agents with unique mechanisms. Inspired by the antiHCC properties of natural sesquiterpenoid dimers and to overcome their limited structural diversity and availability, 26 new guaianolide–eudesmanolide heterodimers were synthesized via Diels–Alder reactions. AntiHCC assay suggested 19 analogues showed better inhibitory activity than sorafenib on HepG2, SK-Hep-1, and Huh7 cells. Surprisingly, chlorinated dimer 10 showed exceptional activity with IC50 values 3.9–6.1 fold superior to sorafenib, inhibited migration and invasion, and induced apoptosis. CDK2 was identified as the target of compound 10 as confirmed by CETSA, DARTS, and functional knockdown assays. Molecular docking and molecular dynamics simulations predicted that compound 10 acted as a novel non-ATP-competitive inhibitor of CDK2. Compound 10 inhibited CDK2/Cyclin A2 with an IC50 value of 236.7 nM, disrupted their interaction, promoted CDK2 degradation via the lysosomal pathway, and ultimately induced G0/G1 phase cell cycle arrest and cellular senescence. In vivo, dimer 10 at 30 and 60 mg/kg inhibited tumor weight up to 64 % and 69 % without detectable toxicity, and IHC analysis confirmed in vivo target engagement. This study identified compound 10 as a potential antiHCC agent targeting CDK2, and warrants further investigation.
肝细胞癌(HCC)仍然是癌症相关死亡的主要原因,迫切需要具有独特机制的新型治疗药物。受天然倍半萜二聚体抗肝癌特性的启发,为克服其结构多样性和可用性的限制,通过Diels-Alder反应合成了26种新的愈创木酚内酯-木烯醇内酯异源二聚体。抗hcc实验显示19种类似物对HepG2、SK-Hep-1和Huh7细胞的抑制活性优于索拉非尼。令人惊讶的是,氯化二聚体10显示出异常的活性,IC50值比索拉非尼高3.9-6.1倍,抑制迁移和侵袭,诱导细胞凋亡。CDK2被确定为化合物10的靶点,经CETSA、dart和功能敲低实验证实。分子对接和分子动力学模拟预测化合物10作为一种新的非atp竞争性CDK2抑制剂。化合物10抑制CDK2/Cyclin A2, IC50值为236.7 nM,破坏两者相互作用,通过溶酶体途径促进CDK2降解,最终导致G0/G1期细胞周期阻滞和细胞衰老。在体内,二聚体10在30和60 mg/kg时抑制肿瘤重量达64%和69%,没有可检测到的毒性,并且免疫结构分析证实了体内靶标的作用。本研究确定化合物10是一种潜在的靶向CDK2的抗hcc药物,值得进一步研究。
{"title":"Synthesis and discovery of guaianolide ‐ eudesmanolide heterodimers as CDK2 inhibitors for the treatment of hepatocellular carcinoma","authors":"Tian-Ze Li ,&nbsp;Feng-Jiao Li ,&nbsp;Min-Min Hu ,&nbsp;Feng-Dan Huang ,&nbsp;Yun-Bao Ma ,&nbsp;Yao Yang ,&nbsp;Yong-Cui Wang ,&nbsp;Ji-Jun Chen","doi":"10.1016/j.ejmech.2025.118412","DOIUrl":"10.1016/j.ejmech.2025.118412","url":null,"abstract":"<div><div>Hepatocellular carcinoma (HCC) remains a leading cause of cancer-related death, creating an urgent need for novel therapeutic agents with unique mechanisms. Inspired by the antiHCC properties of natural sesquiterpenoid dimers and to overcome their limited structural diversity and availability, 26 new guaianolide–eudesmanolide heterodimers were synthesized <em>via</em> Diels–Alder reactions. AntiHCC assay suggested 19 analogues showed better inhibitory activity than sorafenib on HepG2, SK-Hep-1, and Huh7 cells. Surprisingly, chlorinated dimer <strong>10</strong> showed exceptional activity with IC<sub>50</sub> values 3.9–6.1 fold superior to sorafenib, inhibited migration and invasion, and induced apoptosis. CDK2 was identified as the target of compound <strong>10</strong> as confirmed by CETSA, DARTS, and functional knockdown assays. Molecular docking and molecular dynamics simulations predicted that compound <strong>10</strong> acted as a novel non-ATP-competitive inhibitor of CDK2. Compound <strong>10</strong> inhibited CDK2/Cyclin A2 with an IC<sub>50</sub> value of 236.7 nM, disrupted their interaction, promoted CDK2 degradation <em>via</em> the lysosomal pathway, and ultimately induced G0/G1 phase cell cycle arrest and cellular senescence. <em>In vivo</em>, dimer <strong>10</strong> at 30 and 60 mg/kg inhibited tumor weight up to 64 % and 69 % without detectable toxicity, and IHC analysis confirmed <em>in vivo</em> target engagement. This study identified compound <strong>10</strong> as a potential antiHCC agent targeting CDK2, and warrants further investigation.</div></div>","PeriodicalId":314,"journal":{"name":"European Journal of Medicinal Chemistry","volume":"303 ","pages":"Article 118412"},"PeriodicalIF":5.9,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145651013","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
ATTEC-mediated degradation of BCR-ABL in chronic myeloid leukemia cells 慢性髓系白血病细胞中attec介导的BCR-ABL降解
IF 5.9 2区 医学 Q1 CHEMISTRY, MEDICINAL Pub Date : 2025-12-01 DOI: 10.1016/j.ejmech.2025.118430
Zhiyan Wang , Tingting Xu , Yiying Che , Jun-An Ma , Runqi Jin , Boao Mao , Xinru Lai , Kunrong Mei , Hongxia Zhao , Zhiguang Yuchi
Chronic myeloid leukemia (CML) is driven by the BCR-ABL oncoprotein, which exerts both kinase-dependent and kinase-independent oncogenic functions. However, current tyrosine kinase inhibitors (TKIs) fail to eliminate its non-catalytic activities. Here, we report the rational design and synthesis of autophagosome-tethering chimeras (ATTECs) that selectively degrade BCR-ABL via the autophagy-lysosome pathway. By conjugating the BCR-ABL inhibitor dasatinib with the LC3B-binding ligand GW5074, we engineered eight distinct ATTEC variants with diverse linkers. Among them, DS-PPE-GW, featuring a piperidine-based linker, exhibited the most potent antiproliferation activity in K562 CML cells, with an IC50 of 9.62 nM and a DC50 of 11.6 nM, achieving over 90 % BCR-ABL degradation. This degradation suppressed phosphorylation of STAT5, a downstream substrate of BCR-ABL, and significantly inhibited cell proliferation. The activity of DS-PPE-GW was further enhanced by the autophagy activator rapamycin, confirming its autophagy dependence. Notably, DS-PPE-GW did not increase global autophagic flux, suggesting selective engagement of pre-existing autophagosomes. These findings demonstrate that strategically designed ATTECs can efficiently degrade BCR-ABL, targeting both its catalytic and non-catalytic functions, and provide a promising strategy for next-generation CML therapy.
慢性髓性白血病(CML)是由BCR-ABL癌蛋白驱动的,它同时发挥激酶依赖性和激酶非依赖性的致癌功能。然而,目前的酪氨酸激酶抑制剂(TKIs)无法消除其非催化活性。在这里,我们报道了通过自噬-溶酶体途径选择性降解BCR-ABL的自噬体拴系嵌合体(attec)的合理设计和合成。通过将BCR-ABL抑制剂达沙替尼与lc3b结合配体GW5074偶联,我们设计了8种不同的ATTEC变体,具有不同的连接体。其中,ds - pe - gw在K562 CML细胞中表现出最有效的抗增殖活性,IC50为9.62 nM, DC50为11.6 nM,可达到90%以上的BCR-ABL降解。这种降解抑制了BCR-ABL下游底物STAT5的磷酸化,并显著抑制了细胞增殖。自噬激活剂雷帕霉素进一步增强了ds - pep - gw的活性,证实了其自噬依赖性。值得注意的是,DS-PPE-GW没有增加整体自噬通量,这表明已有的自噬体选择性参与。这些发现表明,战略性设计的attec可以有效降解BCR-ABL,同时针对其催化和非催化功能,并为下一代CML治疗提供了有希望的策略。
{"title":"ATTEC-mediated degradation of BCR-ABL in chronic myeloid leukemia cells","authors":"Zhiyan Wang ,&nbsp;Tingting Xu ,&nbsp;Yiying Che ,&nbsp;Jun-An Ma ,&nbsp;Runqi Jin ,&nbsp;Boao Mao ,&nbsp;Xinru Lai ,&nbsp;Kunrong Mei ,&nbsp;Hongxia Zhao ,&nbsp;Zhiguang Yuchi","doi":"10.1016/j.ejmech.2025.118430","DOIUrl":"10.1016/j.ejmech.2025.118430","url":null,"abstract":"<div><div>Chronic myeloid leukemia (CML) is driven by the BCR-ABL oncoprotein, which exerts both kinase-dependent and kinase-independent oncogenic functions. However, current tyrosine kinase inhibitors (TKIs) fail to eliminate its non-catalytic activities. Here, we report the rational design and synthesis of autophagosome-tethering chimeras (ATTECs) that selectively degrade BCR-ABL via the autophagy-lysosome pathway. By conjugating the BCR-ABL inhibitor dasatinib with the LC3B-binding ligand <strong>GW5074</strong>, we engineered eight distinct ATTEC variants with diverse linkers. Among them, <strong>DS-PPE-GW</strong>, featuring a piperidine-based linker, exhibited the most potent antiproliferation activity in K562 CML cells, with an IC<sub>50</sub> of 9.62 nM and a DC<sub>50</sub> of 11.6 nM, achieving over 90 % BCR-ABL degradation. This degradation suppressed phosphorylation of STAT5, a downstream substrate of BCR-ABL, and significantly inhibited cell proliferation. The activity of <strong>DS-PPE-GW</strong> was further enhanced by the autophagy activator rapamycin, confirming its autophagy dependence. Notably, <strong>DS-PPE-GW</strong> did not increase global autophagic flux, suggesting selective engagement of pre-existing autophagosomes. These findings demonstrate that strategically designed ATTECs can efficiently degrade BCR-ABL, targeting both its catalytic and non-catalytic functions, and provide a promising strategy for next-generation CML therapy.</div></div>","PeriodicalId":314,"journal":{"name":"European Journal of Medicinal Chemistry","volume":"303 ","pages":"Article 118430"},"PeriodicalIF":5.9,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145657655","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Fused thiophene – benzimidazole conjugates targeting EGFR: Design, synthesis, anticancer evaluation and their mechanistic insights 靶向EGFR的噻吩-苯并咪唑缀合物:设计、合成、抗癌评价及其机制研究
IF 5.9 2区 医学 Q1 CHEMISTRY, MEDICINAL Pub Date : 2025-11-30 DOI: 10.1016/j.ejmech.2025.118435
Munugala Chandrakanth , Sehal Mishra , Kankipati Gayathri , Rajasekhara Reddy Katreddy , Sampathkumar Ranganathan , Arya C G , Ramesh Gondru , Subbiah Rajasekaran , Janardhan Banothu
The development of potent epidermal growth factor receptor (EGFR)-targeted anticancer agents continues to be a major priority in medicinal chemistry. In the present study, a series of rationally designed acetamide-linked fused thiophene–benzimidazole hybrids (3a–h, 4a–h, 5a–h, and 6a–i) were synthesized and comprehensively characterized using 1H NMR, 13C NMR, and HRMS; compound 6d was further validated by single-crystal X-ray diffraction. The in vitro anticancer potential of the synthesized derivatives was evaluated against PANC-1 (human pancreatic cancer cells), A549 (adenocarcinomic human alveolar basal epithelial cells), and BEAS-2B (normal human bronchial epithelial cells) cell lines. Among them, compound 4d exhibited remarkable potency and selectivity toward PANC-1 cells (IC50 = 0.067 ± 0.019 μM; BEAS-2B, IC50 = 101.93 ± 2.21 μM, SI = 1521.34), whereas compound 6d demonstrated pronounced cytotoxicity against A549 cells (IC50 = 0.82 ± 0.02 μM) with moderate selectivity (BEAS-2B, IC50 = 19.06 ± 0.58 μM, SI = 23.24). Mechanistic investigations in A549 cells revealed that both 4d and 6d induced cell cycle arrest, apoptosis, and alterations in the expression of markers of cell cycle regulators and apoptosis. Furthermore, Western blot analysis revealed that both compounds significantly inhibited the phosphorylation of the EGFR (pEGFR) and also upregulated the expression of LC3B-II (a key marker of autophagy) and cyclin-dependent kinase inhibitor p27, suggesting that activation of autophagy and cell cycle arrest occurred, respectively, thereby inhibiting EGFR phosphorylation and activating downstream cellular responses similar to those of Erlotinib. In addition, the target prediction, followed by molecular docking results, showed strong binding affinities of both compounds toward the EGFR tyrosine kinase domain (PDB ID: 1M17, 2ITY, 2J5F). In silico ADME profiling further highlighted favourable pharmacokinetic properties, reinforcing the potential of 4d and 6d as promising lead candidates. Collectively, these results establish fused thiophene–benzimidazole hybrids as selective EGFR-targeted anticancer agents with strong therapeutic promise.
开发有效的表皮生长因子受体(EGFR)靶向抗癌药物仍然是药物化学的一个主要重点。本研究合成了一系列合理设计的乙酰胺键合噻吩-苯并咪唑杂合体(3a-h、4a-h、5a-h、6a-i),并采用1H NMR、13C NMR、HRMS对其进行了综合表征;化合物6d通过单晶x射线衍射进一步验证。合成的衍生物对人胰腺癌细胞(PANC-1)、腺癌人肺泡基底上皮细胞(A549)和正常人支气管上皮细胞(BEAS-2B)的体外抗癌潜力进行了评价。其中,化合物4d对pac -1细胞具有显著的毒性和选择性(IC50 = 0.067±0.019 μM; BEAS-2B, IC50 = 101.93±2.21 μM, SI = 1521.34),而化合物6d对A549细胞具有明显的毒性(IC50 = 0.82±0.02 μM),选择性中等(BEAS-2B, IC50 = 19.06±0.58 μM, SI = 23.24)。对A549细胞的机制研究表明,4d和6d均诱导细胞周期阻滞、细胞凋亡,以及细胞周期调节因子和细胞凋亡标志物的表达改变。此外,Western blot分析显示,这两种化合物均显著抑制EGFR (pEGFR)的磷酸化,并上调LC3B-II(自噬的关键标志物)和周期蛋白依赖性激酶抑制剂p27的表达,表明自噬激活和细胞周期阻滞分别发生,从而抑制EGFR磷酸化并激活下游细胞反应,类似于埃洛替尼。此外,靶标预测和分子对接结果显示,两种化合物对EGFR酪氨酸激酶结构域(PDB ID: 1M17, 2ITY, 2J5F)具有很强的结合亲和力。ADME分析进一步强调了良好的药代动力学特性,增强了4d和6d作为有希望的主要候选药物的潜力。总的来说,这些结果确立了融合噻吩-苯并咪唑复合物作为选择性egfr靶向抗癌药物具有很强的治疗前景。
{"title":"Fused thiophene – benzimidazole conjugates targeting EGFR: Design, synthesis, anticancer evaluation and their mechanistic insights","authors":"Munugala Chandrakanth ,&nbsp;Sehal Mishra ,&nbsp;Kankipati Gayathri ,&nbsp;Rajasekhara Reddy Katreddy ,&nbsp;Sampathkumar Ranganathan ,&nbsp;Arya C G ,&nbsp;Ramesh Gondru ,&nbsp;Subbiah Rajasekaran ,&nbsp;Janardhan Banothu","doi":"10.1016/j.ejmech.2025.118435","DOIUrl":"10.1016/j.ejmech.2025.118435","url":null,"abstract":"<div><div>The development of potent epidermal growth factor receptor (EGFR)-targeted anticancer agents continues to be a major priority in medicinal chemistry. In the present study, a series of rationally designed acetamide-linked fused thiophene–benzimidazole hybrids (<strong>3a–h, 4a–h, 5a–h,</strong> and <strong>6a–i</strong>) were synthesized and comprehensively characterized using <sup>1</sup>H NMR, <sup>13</sup>C NMR, and HRMS; compound <strong>6d</strong> was further validated by single-crystal X-ray diffraction. The <em>in vitro</em> anticancer potential of the synthesized derivatives was evaluated against PANC-1 (human pancreatic cancer cells), A549 (adenocarcinomic human alveolar basal epithelial cells), and BEAS-2B (normal human bronchial epithelial cells) cell lines. Among them, compound <strong>4d</strong> exhibited remarkable potency and selectivity toward PANC-1 cells (IC<sub>50</sub> = 0.067 ± 0.019 μM; BEAS-2B, IC<sub>50</sub> = 101.93 ± 2.21 μM, SI = 1521.34), whereas compound <strong>6d</strong> demonstrated pronounced cytotoxicity against A549 cells (IC<sub>50</sub> = 0.82 ± 0.02 μM) with moderate selectivity (BEAS-2B, IC<sub>50</sub> = 19.06 ± 0.58 μM, SI = 23.24). Mechanistic investigations in A549 cells revealed that both <strong>4d</strong> and <strong>6d</strong> induced cell cycle arrest, apoptosis, and alterations in the expression of markers of cell cycle regulators and apoptosis. Furthermore, Western blot analysis revealed that both compounds significantly inhibited the phosphorylation of the EGFR (pEGFR) and also upregulated the expression of LC3B-II (a key marker of autophagy) and cyclin-dependent kinase inhibitor p27, suggesting that activation of autophagy and cell cycle arrest occurred, respectively, thereby inhibiting EGFR phosphorylation and activating downstream cellular responses similar to those of Erlotinib. In addition, the target prediction, followed by molecular docking results, showed strong binding affinities of both compounds toward the EGFR tyrosine kinase domain (PDB ID: 1M17, 2ITY, 2J5F). <em>In silico</em> ADME profiling further highlighted favourable pharmacokinetic properties, reinforcing the potential of <strong>4d</strong> and <strong>6d</strong> as promising lead candidates. Collectively, these results establish fused thiophene–benzimidazole hybrids as selective EGFR-targeted anticancer agents with strong therapeutic promise.</div></div>","PeriodicalId":314,"journal":{"name":"European Journal of Medicinal Chemistry","volume":"303 ","pages":"Article 118435"},"PeriodicalIF":5.9,"publicationDate":"2025-11-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145619412","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Targeting Chikungunya virus entry: Enantiomeric separation, synthesis of derivatives, and structure-activity relationship of E1-E2 envelope glycoprotein inhibitors 靶向基孔肯雅病毒入侵:E1-E2包膜糖蛋白抑制剂对映体分离、衍生物合成及构效关系
IF 5.9 2区 医学 Q1 CHEMISTRY, MEDICINAL Pub Date : 2025-11-30 DOI: 10.1016/j.ejmech.2025.118427
Daniela M. Fidalgo , Eliana Castro , Agostina Mazzeo , Tamara J.B. Vazquez , Leandro Battini , Daniel Vladimir , Malena Tejerina Cibello , Facundo N. Gallo , Maximilian A. Rey , Sara A. Thannickal , Sophie N. Spector , Florencia Di Salvo , María E. Monge , Kenneth A. Stapleford , Diego E. Alvarez , Mariela Bollini
Chikungunya virus (CHIKV) remains a global health concern partly due to the lack of effective antiviral strategies to control its current global expansion. In this study, we report the design, synthesis, and biological evaluation of a novel series of small-molecule CHIKV entry inhibitors targeting the viral E1-E2 envelope glycoprotein complex. Starting from a previously identified racemic β-amino alcohol compound (1) with low micromolar antiviral activity, we performed enantiomeric separation, absolute configuration assignment, and biological evaluation of (R)-1 and (S)-1. Both enantiomers retained activity, with (S)-1 showing slightly greater potency (EC50 = 6 ± 1 μM) than (R)-1 (EC50 = 14 ± 4 μM).
A library of 40 derivatives was synthesized to explore structure–activity relationships (SAR), focusing on four key regions: the amino/hydroxyl groups (AH), the piperidine core (PC), the left-hand side (LHS), and the right-hand side (RHS) of the molecule. SAR analysis revealed that the central piperidine scaffold and the hydrogen-bonding capability of the amino and hydroxyl groups were essential for antiviral activity. Bulky or strongly electron-withdrawing substituents on the RHS often increased cytotoxicity. In contrast, several LHS modifications enhanced potency or selectivity.
In vitro ADME profiling of compound 1 and selected derivatives showed favorable chemical and plasma stability and moderate-to-high permeability in the PAMPA assay. However, solubility was limited under neutral conditions, anticipating the need of adequate formulation strategies for in vivo administration. Metabolic stability varied across the series, with certain derivatives showing resistance to CYP-mediated oxidation.
These findings validate the CHIKV E1-E2 heterodimer as a promising antiviral target and identify a set of selective, stable, and synthetically tractable inhibitors suitable for further preclinical development.
基孔肯雅病毒(CHIKV)仍然是一个全球卫生问题,部分原因是缺乏有效的抗病毒战略来控制其目前的全球扩张。在这项研究中,我们报道了一系列针对病毒E1-E2包膜糖蛋白复合物的新型小分子CHIKV进入抑制剂的设计、合成和生物学评价。从先前发现的具有低微摩尔抗病毒活性的外消旋β-氨基醇化合物(1)开始,我们对(R)-1和(S)-1进行了对映体分离、绝对构型分配和生物学评价。两种对映体均保持活性,其中(S)-1的效价(EC50 = 6±1 μM)略高于(R)-1 (EC50 = 14±4 μM)。合成了一个包含40个衍生物的文库,重点研究了分子的四个关键区域:氨基/羟基(AH)、哌啶核(PC)、左侧(LHS)和右侧(RHS)的构效关系(SAR)。SAR分析显示,中心哌替啶支架和氨基和羟基的氢键能力是抗病毒活性所必需的。在RHS上的大体积或强吸电子取代基通常会增加细胞毒性。相比之下,几种LHS修饰增强了效力或选择性。体外ADME分析表明,化合物1及其衍生物具有良好的化学稳定性和血浆稳定性,并且在PAMPA检测中具有中高渗透性。然而,在中性条件下,溶解度有限,预计需要适当的体内给药配方策略。代谢稳定性在整个系列中有所不同,某些衍生物显示出对cypp介导的氧化的抗性。这些发现证实了CHIKV E1-E2异源二聚体是一个有希望的抗病毒靶点,并确定了一组选择性、稳定性和合成易感的抑制剂,适合进一步的临床前开发。
{"title":"Targeting Chikungunya virus entry: Enantiomeric separation, synthesis of derivatives, and structure-activity relationship of E1-E2 envelope glycoprotein inhibitors","authors":"Daniela M. Fidalgo ,&nbsp;Eliana Castro ,&nbsp;Agostina Mazzeo ,&nbsp;Tamara J.B. Vazquez ,&nbsp;Leandro Battini ,&nbsp;Daniel Vladimir ,&nbsp;Malena Tejerina Cibello ,&nbsp;Facundo N. Gallo ,&nbsp;Maximilian A. Rey ,&nbsp;Sara A. Thannickal ,&nbsp;Sophie N. Spector ,&nbsp;Florencia Di Salvo ,&nbsp;María E. Monge ,&nbsp;Kenneth A. Stapleford ,&nbsp;Diego E. Alvarez ,&nbsp;Mariela Bollini","doi":"10.1016/j.ejmech.2025.118427","DOIUrl":"10.1016/j.ejmech.2025.118427","url":null,"abstract":"<div><div>Chikungunya virus (CHIKV) remains a global health concern partly due to the lack of effective antiviral strategies to control its current global expansion. In this study, we report the design, synthesis, and biological evaluation of a novel series of small-molecule CHIKV entry inhibitors targeting the viral E1-E2 envelope glycoprotein complex. Starting from a previously identified racemic β-amino alcohol compound (<strong>1</strong>) with low micromolar antiviral activity, we performed enantiomeric separation, absolute configuration assignment, and biological evaluation of (<em>R</em>)-<strong>1</strong> and (<em>S</em>)-<strong>1</strong>. Both enantiomers retained activity, with (<em>S</em>)-<strong>1</strong> showing slightly greater potency (EC<sub>50</sub> = 6 ± 1 μM) than <em>(R)</em>-<strong>1</strong> (EC<sub>50</sub> = 14 ± 4 μM).</div><div>A library of 40 derivatives was synthesized to explore structure–activity relationships (SAR), focusing on four key regions: the amino/hydroxyl groups (<strong>AH</strong>), the piperidine core (<strong>PC</strong>), the left-hand side (<strong>LHS</strong>), and the right-hand side (<strong>RHS</strong>) of the molecule. SAR analysis revealed that the central piperidine scaffold and the hydrogen-bonding capability of the amino and hydroxyl groups were essential for antiviral activity. Bulky or strongly electron-withdrawing substituents on the <strong>RHS</strong> often increased cytotoxicity. In contrast, several <strong>LHS</strong> modifications enhanced potency or selectivity.</div><div><em>In vitro</em> ADME profiling of compound <strong>1</strong> and selected derivatives showed favorable chemical and plasma stability and moderate-to-high permeability in the PAMPA assay. However, solubility was limited under neutral conditions, anticipating the need of adequate formulation strategies for <em>in vivo</em> administration. Metabolic stability varied across the series, with certain derivatives showing resistance to CYP-mediated oxidation.</div><div>These findings validate the CHIKV E1-E2 heterodimer as a promising antiviral target and identify a set of selective, stable, and synthetically tractable inhibitors suitable for further preclinical development.</div></div>","PeriodicalId":314,"journal":{"name":"European Journal of Medicinal Chemistry","volume":"303 ","pages":"Article 118427"},"PeriodicalIF":5.9,"publicationDate":"2025-11-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145619400","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Indole hybrids: Emerging therapeutic candidates for breast cancer (2023–2025) 吲哚化合物:乳腺癌的新治疗候选药物(2023-2025)
IF 5.9 2区 医学 Q1 CHEMISTRY, MEDICINAL Pub Date : 2025-11-30 DOI: 10.1016/j.ejmech.2025.118449
Shanshan Huang , Zhi Xu
Breast cancer inflicts severe multidimensional harm on physical health, mental well-being, and quality of life, with its impacts spanning localized tissue damage, systemic complications, and long-term functional impairment. Breast cancer remains the most frequently diagnosed cancer and the second leading cause of cancer-related mortality among women worldwide, with its epidemiological burden exhibiting substantial regional variation. Current chemotherapy drugs for breast cancer face critical dilemmas, including widespread primary and secondary drug resistance, as well as severe side effects that harm quality of life and compliance. Additionally, these drugs show limited curative effects in advanced breast cancer, where achieving a cure remains difficult and treatment primarily focuses on controlling tumor progression and extending survival, an area still in need of improvement for long-term outcomes. Indole hybrids have emerged as a highly promising class of therapeutic agents for breast cancer therapy, distinguished by their unique structural design that integrates an indole core with diverse pharmacophores to synergize antitumor activities, enhance subtype selectivity, and surmount key limitations of conventional treatments. Their versatility enables targeted intervention across multiple breast cancer subtypes by modulating critical oncogenic pathways, making them a focal point in preclinical and early clinical research. The present manuscript aims to summarize the current landscape of indole hybrids with therapeutic potential against breast cancers and address their structure-activity relationships and mechanisms of action, covering literature published since 2023, to inform the further rational design of novel candidates.
乳腺癌对身体健康、精神健康和生活质量造成严重的多方面危害,其影响包括局部组织损伤、全身并发症和长期功能损害。乳腺癌仍然是全世界妇女中最常诊断的癌症和与癌症有关的死亡的第二大原因,其流行病学负担显示出很大的区域差异。目前的乳腺癌化疗药物面临着严重的困境,包括广泛的原发性和继发性耐药,以及严重的副作用,影响生活质量和依从性。此外,这些药物对晚期乳腺癌的疗效有限,在晚期乳腺癌中,治愈仍然困难,治疗主要集中在控制肿瘤进展和延长生存期,这一领域的长期预后仍需要改进。吲哚杂合体已成为一种非常有前途的乳腺癌治疗药物,其独特的结构设计将吲哚核心与多种药效团结合在一起,以协同抗肿瘤活性,增强亚型选择性,并克服传统治疗的关键限制。它们的多功能性可以通过调节关键的致癌途径对多种乳腺癌亚型进行靶向干预,使其成为临床前和早期临床研究的焦点。本论文旨在总结具有治疗乳腺癌潜力的吲哚杂合体的现状,并阐述其结构-活性关系和作用机制,涵盖自2023年以来发表的文献,为进一步合理设计新的候选药物提供信息。
{"title":"Indole hybrids: Emerging therapeutic candidates for breast cancer (2023–2025)","authors":"Shanshan Huang ,&nbsp;Zhi Xu","doi":"10.1016/j.ejmech.2025.118449","DOIUrl":"10.1016/j.ejmech.2025.118449","url":null,"abstract":"<div><div>Breast cancer inflicts severe multidimensional harm on physical health, mental well-being, and quality of life, with its impacts spanning localized tissue damage, systemic complications, and long-term functional impairment. Breast cancer remains the most frequently diagnosed cancer and the second leading cause of cancer-related mortality among women worldwide, with its epidemiological burden exhibiting substantial regional variation. Current chemotherapy drugs for breast cancer face critical dilemmas, including widespread primary and secondary drug resistance, as well as severe side effects that harm quality of life and compliance. Additionally, these drugs show limited curative effects in advanced breast cancer, where achieving a cure remains difficult and treatment primarily focuses on controlling tumor progression and extending survival, an area still in need of improvement for long-term outcomes. Indole hybrids have emerged as a highly promising class of therapeutic agents for breast cancer therapy, distinguished by their unique structural design that integrates an indole core with diverse pharmacophores to synergize antitumor activities, enhance subtype selectivity, and surmount key limitations of conventional treatments. Their versatility enables targeted intervention across multiple breast cancer subtypes by modulating critical oncogenic pathways, making them a focal point in preclinical and early clinical research. The present manuscript aims to summarize the current landscape of indole hybrids with therapeutic potential against breast cancers and address their structure-activity relationships and mechanisms of action, covering literature published since 2023, to inform the further rational design of novel candidates.</div></div>","PeriodicalId":314,"journal":{"name":"European Journal of Medicinal Chemistry","volume":"303 ","pages":"Article 118449"},"PeriodicalIF":5.9,"publicationDate":"2025-11-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145651014","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Thiazolyl 4-carboxylate ketone as a new warhead for a highly potent SARS-CoV-2 main protease inhibitor 噻唑基4-羧酸酮作为高效SARS-CoV-2主要蛋白酶抑制剂的新弹头
IF 5.9 2区 医学 Q1 CHEMISTRY, MEDICINAL Pub Date : 2025-11-29 DOI: 10.1016/j.ejmech.2025.118436
Maria A. Theodoropoulou , Haifa El Kilani , Christiana Mantzourani , Dirk Jochmans , Johan Neyts , Kaixuan Zhang , Judith Röske , Maroula G. Kokotou , Rolf Hilgenfeld , George Kokotos
The SARS-CoV-2 main protease (Mpro), an enzyme essential for viral replication and lacking a human homologue, has emerged as a highly attractive target for the development of novel antiviral agents. Although several Mpro inhibitors have been developed — some receiving regulatory approval — their use is sometimes limited by drug-drug interactions. In this study, we designed and synthesized peptidomimetic SARS-CoV-2 Mpro inhibitors incorporating a novel thiazolyl 4-carboxylate ketone warhead, previously employed by our group in the development of cytosolic phospholipase A2 inhibitors. The synthesized compounds were evaluated for their in vitro inhibitory potency against SARS-CoV-2 Mpro, and a highly potent Mpro inhibitor (GK730) was identified (IC50 5.75 nM). The melting temperature of the Mpro-GK730 complex revealed high stability, consistent with the high inhibitory potency. The X-ray crystal structures of inhibitors GK729 and GK730 bound to Mpro were determined, providing insights into the binding interactions and mechanism of action. Studies on the host cell proteases cathepsin B and L showed that GK730 did not inhibit cathepsin B, while exhibited weak inhibition of cathepsin L. Furthermore, GK730 demonstrated an EC50 value of 5.70 μM against a wild-type SARS-CoV-2 strain in Vero E6 cells and minimal cytotoxicity (CC50 value greater than 100 μM).
SARS-CoV-2主蛋白酶(Mpro)是病毒复制所必需的酶,缺乏人类同源物,已成为开发新型抗病毒药物的一个极具吸引力的靶标。尽管已经开发了几种Mpro抑制剂,其中一些已获得监管部门的批准,但它们的使用有时受到药物-药物相互作用的限制。在这项研究中,我们设计并合成了拟肽SARS-CoV-2 Mpro抑制剂,其中包含一种新型的噻唑基4-羧酸酮战斗部,该战斗部之前被我们的团队用于开发胞质磷脂酶A2抑制剂。对合成的化合物体外抑制SARS-CoV-2 Mpro的能力进行了评价,鉴定出高效的Mpro抑制剂GK730 (IC50为5.75 nM)。Mpro-GK730配合物的熔融温度显示出高稳定性,与高抑制效力相一致。测定了与Mpro结合的抑制剂GK729和GK730的x射线晶体结构,为结合相互作用和作用机制提供了新的思路。对宿主细胞蛋白酶组织蛋白酶B和L的研究表明,GK730对组织蛋白酶B无抑制作用,对组织蛋白酶L有较弱的抑制作用。此外,GK730对野生型SARS-CoV-2菌株在Vero E6细胞中的EC50值为5.70 μM,细胞毒性最小(CC50值大于100 μM)。
{"title":"Thiazolyl 4-carboxylate ketone as a new warhead for a highly potent SARS-CoV-2 main protease inhibitor","authors":"Maria A. Theodoropoulou ,&nbsp;Haifa El Kilani ,&nbsp;Christiana Mantzourani ,&nbsp;Dirk Jochmans ,&nbsp;Johan Neyts ,&nbsp;Kaixuan Zhang ,&nbsp;Judith Röske ,&nbsp;Maroula G. Kokotou ,&nbsp;Rolf Hilgenfeld ,&nbsp;George Kokotos","doi":"10.1016/j.ejmech.2025.118436","DOIUrl":"10.1016/j.ejmech.2025.118436","url":null,"abstract":"<div><div>The SARS-CoV-2 main protease (M<sup>pro</sup>), an enzyme essential for viral replication and lacking a human homologue, has emerged as a highly attractive target for the development of novel antiviral agents. Although several M<sup>pro</sup> inhibitors have been developed — some receiving regulatory approval — their use is sometimes limited by drug-drug interactions. In this study, we designed and synthesized peptidomimetic SARS-CoV-2 M<sup>pro</sup> inhibitors incorporating a novel thiazolyl 4-carboxylate ketone warhead, previously employed by our group in the development of cytosolic phospholipase A<sub>2</sub> inhibitors. The synthesized compounds were evaluated for their in vitro inhibitory potency against SARS-CoV-2 M<sup>pro</sup>, and a highly potent M<sup>pro</sup> inhibitor (GK730) was identified (IC<sub>50</sub> 5.75 nM). The melting temperature of the M<sup>pro</sup>-GK730 complex revealed high stability, consistent with the high inhibitory potency. The X-ray crystal structures of inhibitors GK729 and GK730 bound to M<sup>pro</sup> were determined, providing insights into the binding interactions and mechanism of action. Studies on the host cell proteases cathepsin B and L showed that GK730 did not inhibit cathepsin B, while exhibited weak inhibition of cathepsin L. Furthermore, GK730 demonstrated an EC<sub>50</sub> value of 5.70 μM against a wild-type SARS-CoV-2 strain in Vero E6 cells and minimal cytotoxicity (CC<sub>50</sub> value greater than 100 μM).</div></div>","PeriodicalId":314,"journal":{"name":"European Journal of Medicinal Chemistry","volume":"303 ","pages":"Article 118436"},"PeriodicalIF":5.9,"publicationDate":"2025-11-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145614053","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
European Journal of Medicinal Chemistry
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1