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DNA Polymerase β in the Context of Cancer. DNA聚合酶β在癌症中的作用。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-01-01 DOI: 10.1615/CritRevOncog.2022043477
Danielle L Sawyer, Joann B Sweasy

DNA polymerase beta (Pol β) is a 39 kD vertebrate polymerase that lacks proofreading ability, yet still maintains a moderate fidelity of DNA synthesis. Pol β is a key enzyme that functions in the base excision repair and non-homologous end joining pathways of DNA repair. Mechanisms of fidelity for Pol β are still being elucidated but are likely to involve dynamic conformational motions of the enzyme upon its binding to DNA and deoxynucleoside triphosphates. Recent studies have linked germline and somatic variants of Pol β with cancer and autoimmunity. These variants induce genomic instability by a number of mechanisms, including error-prone DNA synthesis and accumulation of single nucleotide gaps that lead to replication stress. Here, we review the structure and function of Pol β, and we provide insights into how structural changes in Pol β variants may contribute to genomic instability, mutagenesis, disease, cancer development, and impacts on treatment outcomes.

DNA聚合酶β (Pol β)是一种39 kD的脊椎动物聚合酶,缺乏校对能力,但仍保持中等的DNA合成保真度。Pol β是DNA修复中碱基切除修复和非同源末端连接途径的关键酶。Pol β保真度的机制仍在阐明中,但可能涉及酶与DNA和脱氧核苷三磷酸结合时的动态构象运动。最近的研究将Pol β的种系和体细胞变异与癌症和自身免疫联系起来。这些变异通过多种机制诱导基因组不稳定,包括容易出错的DNA合成和导致复制压力的单核苷酸缺口积累。在这里,我们回顾了Pol β的结构和功能,并提供了Pol β变异体的结构变化如何有助于基因组不稳定、突变、疾病、癌症发展以及对治疗结果的影响。
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引用次数: 1
Preface: In Memory of Dr. Gopinadhan Paliyath (Gopi) 1950-2022. 前言:纪念Gopinadhan palyath博士(Gopi) 1950-2022。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-01-01 DOI: 10.1615/CritRevOncog.v27.i3.20
Jayasankar Subramanian
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引用次数: 0
CRISPR/Cas9: A Molecular Tool for Ovarian Cancer Management beyond Gene Editing. CRISPR/Cas9:超越基因编辑的卵巢癌治疗分子工具
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-01-01 DOI: 10.1615/CritRevOncog.2022043814
Sagar Dholariya, Deepak Parchwani, Madhuri Radadiya, Ragini D Singh, Amit Sonagra, Digishaben Patel, Gaurav Sharma

Ovarian cancer manifests with early metastases and has an adverse outcome, impacting the health of women globally. Currently, this malignancy is often treated with cytoreductive surgery and platinum-based chemotherapy. This treatment option has a limited success rate due to tumor recurrence and chemoresistance. Consequently, the fundamental objective of ovarian cancer treatment is the development of novel treatment approaches. As a new robust tool, the CRISPR/Cas9 gene-editing system has shown immense promise in elucidating the molecular basis of all the facets of ovarian cancer. Due to the precise gene editing capabilities of CRISPR-Cas9, researchers have been able to conduct a more comprehensive investigation of the genesis of ovarian cancer. This gained knowledge can be translated into the development of novel diagnostic approaches and newer therapeutic targets for this dreadful malignancy. There is encouraging preclinical evidence that suggests that CRISPR/Cas9 is a powerful versatile tool for selectively targeting cancer cells and inhibiting tumor growth, establishing new signaling pathways involved in carcinogenesis, and verifying biomolecules as druggable targets. In this review, we analyzed the current research and progress made using CRISPR/Cas9-based engineering strategies in the diagnosis and treatment, as well as the challenges in bringing this method to clinics. This comprehensive analysis will lay the basis for subsequent research in the future for the treatment of ovarian cancer.

卵巢癌表现为早期转移,并具有不良后果,影响全球妇女的健康。目前,这种恶性肿瘤通常采用细胞减缩手术和铂基化疗治疗。由于肿瘤复发和化疗耐药,这种治疗方法的成功率有限。因此,卵巢癌治疗的基本目标是开发新的治疗方法。作为一种新的强大工具,CRISPR/Cas9基因编辑系统在阐明卵巢癌所有方面的分子基础方面显示出巨大的希望。由于CRISPR-Cas9精确的基因编辑能力,研究人员已经能够对卵巢癌的发生进行更全面的研究。这种获得的知识可以转化为开发新的诊断方法和新的治疗靶点来治疗这种可怕的恶性肿瘤。令人鼓舞的临床前证据表明,CRISPR/Cas9是一种强大的多功能工具,可选择性靶向癌细胞并抑制肿瘤生长,建立参与致癌的新信号通路,并验证生物分子可作为药物靶点。在这篇综述中,我们分析了基于CRISPR/ cas9的工程策略在诊断和治疗中的研究现状和进展,以及将该方法应用于临床所面临的挑战。这一综合分析将为今后卵巢癌治疗的后续研究奠定基础。
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引用次数: 0
Phenotypic Plasticity - Alternate Transcriptional Programs Driving Treatment Resistant Prostate Cancer. 表型可塑性-替代转录程序驱动治疗耐药前列腺癌。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-01-01 DOI: 10.1615/CritRevOncog.2022043096
Jagpreet Singh Nanda, Praveen Koganti, Graziela Perri, Leigh Ellis

Androgen deprivation therapy (ADT) that antagonizes androgen receptor (AR) signaling has made significant increases to overall survival of prostate cancer patients. However, ADT is not curative, and patients eventually progress to castration resistant disease (CRPC). It has become evident that a subset of prostate cancers acquire ADT resistance through mechanisms independent of AR alteration or reprogramming of AR signaling. This approximately involves a quarter of prostate cancers progressing on ADT. Collectively, these tumors evolve via phenotypic plasticity and display the activation of developmental and stemness gene signatures as well as transitional programs including an epithelial-mesenchymal phenotype. Currently, no successful treatments exist for prostate cancer patients to inhibit or reverse prostate tumor progression that utilizes mechanisms of epi-plasticity. This overview will discuss epigenetic mechanisms that mediate phenotypic plasticity and the potential for targeting the epigenome to create a novel direction for combination strategies involving epigenetic therapy to provide durable response.

雄激素剥夺疗法(ADT)拮抗雄激素受体(AR)信号,显著提高前列腺癌患者的总生存率。然而,ADT不能治愈,患者最终发展为去势抵抗性疾病(CRPC)。很明显,一部分前列腺癌通过独立于AR改变或AR信号重编程的机制获得ADT耐药性。大约有四分之一的前列腺癌在ADT治疗后进展。总的来说,这些肿瘤通过表型可塑性进化,并表现出发育和干性基因特征的激活以及包括上皮-间充质表型在内的过渡程序。目前,尚无成功的前列腺癌患者利用上皮可塑性机制抑制或逆转前列腺肿瘤进展的治疗方法。本综述将讨论介导表型可塑性的表观遗传机制,以及靶向表观基因组的潜力,为涉及表观遗传治疗的联合策略创造新的方向,以提供持久的反应。
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引用次数: 0
The Challenges and Emerging Opportunities of Targeting Cytokines and Chemokine-Driven Inflammatory Signals in Metastatic Castrate-Resistant Prostate Cancer. 靶向细胞因子和趋化因子驱动的炎症信号在转移性去势抵抗性前列腺癌中的挑战和新机遇。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-01-01 DOI: 10.1615/CritRevOncog.2022043441
David J J Waugh, Jacqui A McGovern, Suzanne McCusker

Inflammation is a key risk factor and functional driver in the initiation and progression of prostate cancer (PCa). De-regulated cytokine and chemokine signaling facilitates critical communication between tumor cells and multiple cell lineages within the tumor microenvironment (TME). Historical attempts at using targeted approaches to disrupt inflammation have been disappointing, with sub-optimal or negligible clinical benefit. Our increased awareness of the myeloid infiltrate in supporting the acquisition of castrate resistance and underpinning the abject response of advanced PCa to immunotherapy has re-focused attention on improved strategies to disrupt these complex cytokine and chemokine signaling networks within the TME. These ongoing and prospective strategies are principally focused on employing cytokine-/chemokine-directed therapies in informed combination with androgen signaling inhibitors or immunotherapeutic agents and, increasingly, with due consideration of the genetic context of the tumor. The availability of molecular-targeted therapeutic agents directed against the critical signal transduction nodes activated by cytokine and chemokine signaling in tumor cells provides opportunities to reduce the impacts of biological redundancy. Precision-based trials that deploy this latest generation of cytokine- and chemokine-directed therapeutics, directed to enriched patient cohorts in a biologically informed and biomarker-guided manner, have the potential to diversify the armamentarium of agents that is required in order to transform long-term outcomes for a currently incurable and genetically heterogenous disease.

炎症是前列腺癌发生和发展的关键危险因素和功能驱动因素。去调控的细胞因子和趋化因子信号传导促进肿瘤细胞和肿瘤微环境(TME)内多个细胞系之间的关键通信。历史上使用靶向方法破坏炎症的尝试令人失望,临床效果不理想或可以忽略不计。我们对骨髓浸润支持去势抵抗的获得和晚期前列腺癌对免疫治疗的不良反应的认识的提高,重新将注意力集中在改进策略上,以破坏TME内这些复杂的细胞因子和趋化因子信号网络。这些正在进行的和前瞻性的策略主要集中在使用细胞因子/趋化因子导向的治疗,与雄激素信号抑制剂或免疫治疗剂联合使用,并且越来越多地考虑到肿瘤的遗传背景。针对肿瘤细胞中由细胞因子和趋化因子信号激活的关键信号转导节点的分子靶向治疗剂的可用性为减少生物冗余的影响提供了机会。采用最新一代以细胞因子和趋化因子为导向的治疗方法,以生物学信息和生物标志物为导向的方式,针对丰富的患者群体进行的基于精确的试验,有可能使所需的药物种类多样化,从而改变目前无法治愈和遗传异质性疾病的长期结果。
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引用次数: 2
Specialized Circuitry of Embryonic Stem Cells Promotes Genomic Integrity. 胚胎干细胞的特化电路促进基因组完整性。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-01-01 DOI: 10.1615/CritRevOncog.2022042332
Elisia D Tichy

Embryonic stem cells (ESCs) give rise to all cell types of the organism. Given the importance of these cells in this process, ESCs must employ robust mechanisms to protect genomic integrity or risk catastrophic propagation of mutations throughout the organism. Should such an event occur in daughter cells that will eventually contribute to the germline, the overall species health could dramatically decline. This review describes several key mechanisms employed by ESCs that are unique to these cells, in order to maintain their genomic integrity. Additionally, the contributions of cell cycle regulators in modulating ESC differentiation, after DNA damage exposure, are also examined. Where data are available, findings reported in ESCs are extended to include observations described in induced pluripotent stem cells (IPSCs).

胚胎干细胞(ESCs)产生生物体的所有细胞类型。考虑到这些细胞在这一过程中的重要性,ESCs必须采用强大的机制来保护基因组的完整性,否则将面临突变在整个生物体中灾难性传播的风险。如果这样的事件发生在最终有助于生殖系的子细胞中,整个物种的健康可能会急剧下降。这篇综述描述了ESCs所使用的几个关键机制,这些机制是这些细胞所特有的,以保持它们的基因组完整性。此外,在DNA损伤暴露后,细胞周期调节剂在调节ESC分化中的作用也得到了检验。在数据可用的情况下,ESCs报告的发现被扩展到包括在诱导多能干细胞(IPSCs)中描述的观察结果。
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引用次数: 0
Dopamine Receptors in Breast Cancer: Prevalence, Signaling, and Therapeutic Applications. 乳腺癌中的多巴胺受体:患病率、信号传导和治疗应用。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-01-01 DOI: 10.1615/CritRevOncog.2022043641
Nira Ben-Jonathan, Dana C Borcherding, Eric R Hugo

Breast cancer (BC) is the most common malignancy among women, with over one million cases occurring annually worldwide. Although therapies against estrogen receptors and HER2 have improved response rate and survival, patients with advanced disease, who are resistant to anti-hormonal therapy and/or to chemotherapy, have limited treatment options for reducing morbidity and mortality. These limitations provide major incentives for developing new, effective, and personalized therapeutic interventions. This review presents evidence on the involvement of dopamine (DA) and its type 1 receptors (D1R) in BC. DA is produced in multiple peripheral organs and is present in the systemic circulation in significant amounts. D1R is overexpressed in ~ 30% of BC cases and is associated with advanced disease and shortened patient survival. Activation of D1R, which signals via the cGMP/PKG pathway, results in apoptosis, inhibition of cell invasion, and increased chemosensitivity in multiple BC cell lines. Fenoldopam, a peripheral D1R agonist that does not penetrate the brain, dramatically suppressed tumor growth in mouse models with D1R-expressing BC xenografts. It is proposed that D1R should serve as a novel diagnostic/prognostic factor through the use of currently available D1R detection methods. Fenoldopam, which is FDA-approved to treat renal hypertension, could be repurposed as an effective therapeutic agent for patients with D1R-expressing tumors. Several drugs that interfere with the cGMP/PKG pathway and are approved for treating other diseases should also be considered as potential treatments for BC.

乳腺癌(BC)是女性中最常见的恶性肿瘤,全球每年发生超过100万例。尽管针对雌激素受体和HER2的治疗提高了应答率和生存率,但对抗激素治疗和/或化疗有耐药性的晚期疾病患者,在降低发病率和死亡率方面的治疗选择有限。这些限制为开发新的、有效的、个性化的治疗干预措施提供了主要动力。本文综述了多巴胺(DA)及其1型受体(D1R)参与BC的证据。DA在多个外周器官中产生,并在体循环中大量存在。D1R在约30%的BC病例中过表达,与疾病晚期和患者生存期缩短有关。D1R通过cGMP/PKG通路发出信号,其激活可导致多种BC细胞系的凋亡、细胞侵袭抑制和化学敏感性增加。非诺多巴是一种不穿透大脑的外周D1R激动剂,在表达D1R的BC异种移植小鼠模型中显著抑制肿瘤生长。我们建议,通过使用现有的D1R检测方法,D1R应该作为一种新的诊断/预后因素。非诺多泮是fda批准用于治疗肾性高血压的药物,可能会被重新用作d1r表达肿瘤患者的有效治疗药物。一些干扰cGMP/PKG通路并被批准用于治疗其他疾病的药物也应被视为BC的潜在治疗方法。
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引用次数: 0
Eliminating Cancer Stem-Like Cells in Oral Cancer by Targeting Elementary Signaling Pathways. 通过靶向基本信号通路消除口腔癌中的癌症干细胞样细胞。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-01-01 DOI: 10.1615/CritRevOncog.2022047207
Jigna Joshi, Hitarth Patel, Hunayna Bhavnagari, Bhoomi Tarapara, Apexa Pandit, Franky Shah

Oral cancer is a heterogeneous, aggressive, and complex entity. Current major treatment options for the disease are surgery, chemo, and/or radiotherapy either alone or in combination with each other. Each treatment method has its own limitations such as a significant journey with deformities and a protracted rehabilitation process leading to loss of self-esteem, loss of tolerance, and therapeutic side effects. Conventional therapies are frequently experienced with regimen resistance and recurrence attributed to the cancer stem cells (CSCs). Given that CSCs exert their tumorigenesis by affecting several cellular and molecular targets and pathways an improved understanding of CSCs' actions is required. Hence, more research is recommended to fully understand the fundamental mechanisms driving CSC-mediated treatment resistance. Despite the difficulties and disagreements surrounding the removal of CSCs from solid tumors, a great amount of knowledge has been derived from the characterization of CSCs. Various efforts have been made to identify the CSCs using several cell surface markers. In the current review, we will discuss numerous cell surface markers such as CD44, ALDH1, EPCAM, CD24, CD133, CD271, CD90, and Cripto-1 for identifying and isolating CSCs from primary oral squamous cell carcinoma (OSCC). Further, a spectrum of embryonic signaling pathways has been thought to be the main culprit of CSCs' active state in cancers, resulting in conventional therapeutic resistance. Hence, we discuss the functional and molecular bases of several signaling pathways such as the Wnt/beta;-catenin, Notch, Hedgehog, and Hippo pathways and their associations with disease aggressiveness. Moreover, numerous inhibitors targeting the above mentioned signaling pathways have already been identified and some of them are already undergoing clinical trials. Hence, the present review encapsulates the characterization and effectiveness of the prospective potential targeted therapies for eradicating CSCs in oral cancers.

口腔癌是一种异质性、侵袭性和复杂性的肿瘤。目前该疾病的主要治疗方案是手术、化疗和/或放疗,可以单独使用,也可以相互联合使用。每种治疗方法都有其自身的局限性,例如伴随畸形的漫长旅程和导致自尊丧失、耐受性丧失和治疗副作用的漫长康复过程。由于癌症干细胞(CSCs)的存在,常规治疗方案经常出现耐药性和复发。鉴于CSCs通过影响几种细胞和分子靶点和途径发挥其肿瘤发生作用,需要更好地了解CSCs的作用。因此,建议进行更多的研究,以充分了解驱动csc介导的治疗耐药的基本机制。尽管围绕从实体肿瘤中去除CSCs存在困难和分歧,但从CSCs的表征中获得了大量知识。使用几种细胞表面标记物来鉴定csc已经做了各种努力。在当前的综述中,我们将讨论许多细胞表面标记,如CD44、ALDH1、EPCAM、CD24、CD133、CD271、CD90和Cripto-1,用于鉴定和分离原发性口腔鳞状细胞癌(OSCC)中的csc。此外,一系列胚胎信号通路被认为是CSCs在癌症中处于活跃状态的罪魁祸首,导致常规治疗抵抗。因此,我们讨论了几种信号通路的功能和分子基础,如Wnt/ β、-catenin、Notch、Hedgehog和Hippo通路及其与疾病侵袭性的关系。此外,许多针对上述信号通路的抑制剂已经被发现,其中一些已经在进行临床试验。因此,本综述概述了根除口腔癌中CSCs的潜在靶向治疗的特征和有效性。
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引用次数: 1
Diagnostic and Prognostic Implications of Cardiac Markers for Hepatocellular Carcinoma. 肝细胞癌心脏标志物的诊断和预后意义。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2021-01-01 DOI: 10.1615/CritRevOncog.2020036305
Mohan Krishna Ghanta, Afzal Khan Akbar Khan, L V K S Bhaskar

Hepatocellular carcinoma (HC) is a malignant primary liver cancer which has poor treatment outcomes in advanced stages, and many of the HC patients present with advanced stages. The incidence of death due to HC increase as a result of ineffective treatments for advanced stage disease. Early diagnosis and management has proven benefits in both survival and quality of life. Currently very few biomarkers are available to provide diagnostic and prognostic benefits in HC patients. The present review elaborates the association of cardiac markers in HC disease. The HC disease pathology includes many cardiovascular events like hypoxia and other parameters discussed in this review which have a role in disease advancement, and also may help as diagnostic and / or prognostic markers. The scientific lacuna in association / role of cardiac markers in HC disease is also stated in this review which may be helpful for future research studies and develop cost effective biomarker for early diagnosis of HC.

肝细胞癌(HC)是一种恶性原发性肝癌,晚期治疗效果较差,许多HC患者出现晚期。由于对晚期疾病的治疗无效,HC的死亡率增加。早期诊断和管理已被证明对生存和生活质量都有好处。目前,很少有生物标志物可用于HC患者的诊断和预后。本文综述了心脏标志物与HC疾病的关系。HC疾病病理包括许多心血管事件,如缺氧和本综述中讨论的其他参数,这些参数在疾病进展中起作用,也可能有助于诊断和/或预后标志物。本文还综述了心脏标志物在HC发病中的关联和作用方面的科学空白,以期为今后的研究和开发具有成本效益的HC早期诊断生物标志物提供参考。
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引用次数: 0
Circadian Rhythm and Melatonin in Liver Carcinogenesis: Updates on Current Findings. 肝癌发生过程中的昼夜节律和褪黑激素:最新研究成果。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2021-01-01 DOI: 10.1615/CritRevOncog.2021039881
Yuyan Han, Lixian Chen, Leonardo Baiocchi, Ludovica Ceci, Shannon Glaser, Heather Francis, Gianfranco Alpini, Lindsey Kennedy

Liver cancer, including hepatocellular carcinoma and cholangiocarcinoma, can be devastating if not treated early. The risk factors of liver cancer include alcoholic liver disease, non-alcoholic fatty liver disease, disruption of melatonin levels, and dysregulated circadian rhythm. The circadian rhythm is a 24-hour biological clock that regulates the physiological activities at both central and peripheral levels. Its molecular mechanism exists in every cell in mammals. Disruption of the circadian rhythm has found in liver cancers as an independent risk factor. This review summarized the most recent findings about the molecular mechanisms of circadian rhythm, the crosstalk between core clock genes and melatonin, as well as the role of circadian rhythm and melatonin played in chronic liver diseases and liver cancer. Finally, we discussed the potential clinical application of circadian rhythm and melatonin for the treatment of liver cancer and discussed future perspectives of how understanding the circadian rhythm in liver cancer progression could provide new clinical applications for liver cancer treatment and diagnosis.

肝癌,包括肝细胞癌和胆管癌,如果不及早治疗,可能会造成毁灭性的后果。肝癌的危险因素包括酒精性肝病、非酒精性脂肪肝、褪黑激素水平紊乱和昼夜节律失调。昼夜节律是一种 24 小时生物钟,调节中枢和外周的生理活动。其分子机制存在于哺乳动物的每个细胞中。昼夜节律紊乱是肝癌的一个独立风险因素。本综述总结了有关昼夜节律的分子机制、核心时钟基因与褪黑激素之间的相互影响,以及昼夜节律和褪黑激素在慢性肝病和肝癌中的作用的最新发现。最后,我们讨论了昼夜节律和褪黑激素在肝癌治疗中的潜在临床应用,并探讨了了解肝癌进展中的昼夜节律如何为肝癌治疗和诊断提供新的临床应用的未来前景。
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引用次数: 0
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Critical Reviews in Oncogenesis
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