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Convolutional Neural Networks for Glioma Segmentation and Prognosis: A Systematic Review. 卷积神经网络用于胶质瘤分割和预后:系统性综述
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1615/CritRevOncog.2023050852
Janette Herr, Radka Stoyanova, Eric Albert Mellon

Deep learning (DL) is poised to redefine the way medical images are processed and analyzed. Convolutional neural networks (CNNs), a specific type of DL architecture, are exceptional for high-throughput processing, allowing for the effective extraction of relevant diagnostic patterns from large volumes of complex visual data. This technology has garnered substantial interest in the field of neuro-oncology as a promising tool to enhance medical imaging throughput and analysis. A multitude of methods harnessing MRI-based CNNs have been proposed for brain tumor segmentation, classification, and prognosis prediction. They are often applied to gliomas, the most common primary brain cancer, to classify subtypes with the goal of guiding therapy decisions. Additionally, the difficulty of repeating brain biopsies to evaluate treatment response in the setting of often confusing imaging findings provides a unique niche for CNNs to help distinguish the treatment response to gliomas. For example, glioblastoma, the most aggressive type of brain cancer, can grow due to poor treatment response, can appear to grow acutely due to treatment-related inflammation as the tumor dies (pseudo-progression), or falsely appear to be regrowing after treatment as a result of brain damage from radiation (radiation necrosis). CNNs are being applied to separate this diagnostic dilemma. This review provides a detailed synthesis of recent DL methods and applications for intratumor segmentation, glioma classification, and prognosis prediction. Furthermore, this review discusses the future direction of MRI-based CNN in the field of neuro-oncology and challenges in model interpretability, data availability, and computation efficiency.

深度学习(DL)有望重新定义医学图像的处理和分析方式。卷积神经网络(CNN)是一种特定类型的深度学习架构,在高通量处理方面表现出色,可从大量复杂的视觉数据中有效提取相关诊断模式。这项技术在神经肿瘤学领域引起了极大的兴趣,被认为是提高医学成像吞吐量和分析能力的有效工具。利用基于 MRI 的 CNN 进行脑肿瘤分割、分类和预后预测的方法层出不穷。它们通常应用于胶质瘤(最常见的原发性脑癌)的亚型分类,目的是指导治疗决策。此外,在成像结果经常令人困惑的情况下,重复脑活检以评估治疗反应存在困难,这为 CNN 提供了一个独特的利基,有助于区分胶质瘤的治疗反应。例如,胶质母细胞瘤是侵袭性最强的脑癌类型,它可能因治疗反应不佳而生长,也可能因治疗相关炎症导致肿瘤坏死而出现急性生长(假性进展),或因辐射造成脑损伤而在治疗后出现假性再生(辐射坏死)。目前正在应用 CNN 解决这一诊断难题。本综述详细综述了最近用于肿瘤内分割、胶质瘤分类和预后预测的 DL 方法和应用。此外,本综述还讨论了基于 MRI 的 CNN 在神经肿瘤学领域的未来发展方向,以及在模型可解释性、数据可用性和计算效率方面所面临的挑战。
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引用次数: 0
Neuroplasticity: Pathophysiology and Role in Major Depressive Disorder. 神经可塑性:病理生理学及在重度抑郁症中的作用。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1615/CritRevOncog.2024051197
Sreeharshini Kadiyala, Priyamvada Bhamidipati, Rama Rao Malla

Neuroplasticity is characterized by the brain's ability to change its activity in response to extrinsic and intrinsic factors and is thought to be the mechanism behind all brain functions. Neuroplasticity causes structural and functional changes on a molecular level, specifically the growth of different regions in the brain and changes in synaptic and post-synaptic activities. The four types of neuroplasticity are homologous area adaption, compensatory masquerade, cross-modal reassignment, and map expansion. All of these help the brain work around injuries or new information inputs. In addition to baseline physical functions, neuroplasticity is thought to be the basis of emotional and mental regulations and the impairment of it can cause various mental illnesses. Concurrently, these mental illnesses further the damage of synaptic plasticity in the brain. Major depressive disorder (MDD) is one of the most common mental illnesses. It is affected by and accelerates the impairment of neuroplasticity. It is characterized by a chronically depressed state of mind that can impact the patient's daily life, including work life and interests. This review will focus on highlighting the physiological aspects of the disease and the role of neuroplasticity in the pathogenesis and pathology of the disorder. Moreover, the role of monoamine regulation and ketamine uptake will be discussed in terms of their antidepressant effects on the outcomes of MDD.

神经可塑性的特点是大脑能够根据外在和内在因素改变其活动,被认为是所有大脑功能背后的机制。神经可塑性在分子水平上引起结构和功能的变化,特别是大脑中不同区域的生长以及突触和突触后活动的变化。神经可塑性的四种类型是同源区域适应、补偿性伪装、跨模态重新分配和地图扩展。所有这些都有助于大脑在受伤或新信息输入的情况下工作。除了基本的生理功能外,神经可塑性还被认为是情绪和精神调节的基础,其受损会导致各种精神疾病。同时,这些精神疾病会进一步损害大脑的突触可塑性。重度抑郁症(MDD)是最常见的精神疾病之一。它受到神经可塑性损伤的影响,并加速神经可塑性损伤。它的特点是长期处于抑郁的精神状态,会影响患者的日常生活,包括工作生活和兴趣爱好。本综述将重点介绍该疾病的生理方面以及神经可塑性在该疾病的发病机制和病理学中的作用。此外,还将讨论单胺调节和氯胺酮摄取对 MDD 治疗结果的抗抑郁作用。
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引用次数: 0
Preface. 序言
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1615/CritRevOncog.v29.i3.30
Benjamin Bonavida, Stuart Samuels
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引用次数: 0
Surgical Management of the Neck in Oral Cavity Squamous Cell Carcinoma. 口腔鳞状细胞癌的颈部手术治疗。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1615/CritRevOncog.2023050817
Olivia Mihulka, Eric Nisenbaum, Elizabeth Nicolli

Oral cavity cancer remains a significant cause of morbidity and mortality globally, with a poor prognosis once the disease has metastasized to cervical lymph nodes. The anatomy of lymphatic drainage in the neck gives us a roadmap to follow when assessing for metastasis, although the predictive factors are still not well understood. The mainstay of treatment continues to be neck dissection. However, there is much debate on the management of the clinically negative neck. The necessity of elective neck dissection has been questioned in recent years, with other options such as sentinel lymph node biopsy gaining popularity. This review will explore the aspects of surgical management of the neck in oral cavity cancer and highlights the further research that needs to be done.

口腔癌仍然是全球发病率和死亡率的重要原因,一旦转移到颈部淋巴结,预后很差。颈部淋巴引流的解剖结构为我们评估转移提供了路线图,尽管预测因素仍不十分清楚。治疗的主要方法仍然是颈部清扫术。然而,对于临床阴性颈部淋巴结的处理仍存在很多争议。近年来,随着前哨淋巴结活检等其他方法的流行,选择性颈部切除术的必要性受到质疑。本综述将探讨口腔癌颈部手术治疗的各个方面,并强调需要进一步开展的研究。
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引用次数: 0
Oral Cavity Squamous Cell Carcinoma: Review of Pathology, Diagnosis, and Management. 口腔鳞状细胞癌:病理学、诊断和处理回顾。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1615/CritRevOncog.2023050055
Benjamin J Rich, Stuart E Samuels, Gregory A Azzam, Gregory Kubicek, Laura Freedman

Squamous cell carcinoma of the oral cavity presents a significant global health burden, primarily due to risk factors such as tobacco smoking, smokeless tobacco use, heavy alcohol consumption, and betel quid chewing. Common clinical manifestations of oral cavity cancer include visible lesions and sores, often accompanied by pain in advanced stages. Diagnosis relies on a comprehensive assessment involving detailed history, physical examination, and biopsy. Ancillary imaging studies and functional evaluations aid in accurate staging and facilitate treatment planning. Prognostic information is obtained from histopathological factors, such as tumor grade, depth of invasion, lymphovascular invasion, and perineural invasion. Notably, lymph node metastasis, found in approximately half of the patients, carries significant prognostic implications. Effective management necessitates a multidisciplinary approach to optimize patient outcomes. Surgical resection is the backbone of treatment, aimed at complete tumor removal while preserving functional outcomes. Adjuvant therapies, including radiation and chemotherapy, are tailored according to pathological factors. Further work in risk stratification and treatment is necessary to optimize outcomes in squamous cell carcinoma of the oral cavity.

口腔鳞状细胞癌给全球健康带来了巨大负担,这主要是由于吸烟、使用无烟烟草、大量饮酒和嚼槟榔等风险因素造成的。口腔癌的常见临床表现包括明显的病变和溃疡,晚期患者通常伴有疼痛。诊断有赖于全面的评估,包括详细的病史、体格检查和活组织检查。辅助影像学检查和功能评估有助于准确分期和制定治疗计划。预后信息可从组织病理学因素中获得,如肿瘤分级、浸润深度、淋巴管浸润和神经周围浸润。值得注意的是,淋巴结转移在约半数患者中发现,对预后有重要影响。有效的治疗需要采用多学科方法,以优化患者的预后。手术切除是治疗的支柱,目的是彻底切除肿瘤,同时保留功能性结果。辅助治疗包括放疗和化疗,根据病理因素量身定制。为优化口腔鳞状细胞癌的治疗效果,有必要进一步开展风险分层和治疗工作。
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引用次数: 0
Disparities in Electronic Cigarette Use: A Narrative Review. 电子烟使用中的差异:叙述性综述。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1615/CritRevOncog.2024051128
Kyle Edwards, Aysswarya Manoharan, Taghrid Asfar, Samuel Kareff, Gilberto Lopes, Estelamari Rodriguez, Coral Olazagasti

The prevalence of electronic cigarette use has been declared an epidemic by the U.S. Surgeon General in 2018, particularly among youth aged 18-24 years old. Little is known about the differential use of e-cigarettes by different groups. PubMed, Cochrane, and Google Scholar were used to find relevant articles. A total of 77 articles were included. The extant literature reveals disparities in e-cigarette use by race/ethnicity and sexuality/gender. There are conflicting conclusions regarding disparities by socioeconomic status.

2018 年,美国卫生总监宣布电子烟的使用盛行已成为一种流行病,尤其是在 18-24 岁的青少年中。人们对不同群体使用电子烟的差异知之甚少。我们使用PubMed、Cochrane和谷歌学术搜索相关文章。共收录了 77 篇文章。现有文献揭示了不同种族/民族和性/性别使用电子烟的差异。关于社会经济地位的差异,结论相互矛盾。
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引用次数: 0
Radiomics and Artificial Intelligence in Renal Lesion Assessment. 放射组学和人工智能在肾脏病变评估中的应用
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1615/CritRevOncog.2023051084
Michaela Cellina, Giovanni Irmici, Gianmarco Della Pepa, Maurizio Ce, Vittoria Chiarpenello, Marco Alì, Sergio Papa, Gianpaolo Carrafiello

Radiomics, the extraction and analysis of quantitative features from medical images, has emerged as a promising field in radiology with the potential to revolutionize the diagnosis and management of renal lesions. This comprehensive review explores the radiomics workflow, including image acquisition, feature extraction, selection, and classification, and highlights its application in differentiating between benign and malignant renal lesions. The integration of radiomics with artificial intelligence (AI) techniques, such as machine learning and deep learning, can help patients' management and allow the planning of the appropriate treatments. AI models have shown remarkable accuracy in predicting tumor aggressiveness, treatment response, and patient outcomes. This review provides insights into the current state of radiomics and AI in renal lesion assessment and outlines future directions for research in this rapidly evolving field.

放射组学是从医学影像中提取和分析定量特征,它已成为放射学中一个前景广阔的领域,有望彻底改变肾脏病变的诊断和管理。本综述探讨了放射组学的工作流程,包括图像采集、特征提取、选择和分类,并重点介绍了其在区分肾脏良性和恶性病变方面的应用。将放射组学与机器学习和深度学习等人工智能(AI)技术相结合,有助于患者的管理,并可规划适当的治疗。人工智能模型在预测肿瘤侵袭性、治疗反应和患者预后方面表现出极高的准确性。本综述深入探讨了放射组学和人工智能在肾脏病变评估中的应用现状,并概述了这一快速发展领域的未来研究方向。
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引用次数: 0
Polarization of M2 Tumor-Associated Macrophages (TAMs) in Cancer Immunotherapy. 癌症免疫疗法中 M2 肿瘤相关巨噬细胞 (TAM) 的极化。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1615/CritRevOncog.2024053830
Indy Bui, Benjamin Bonavida

We have witnessed in the last decade new milestones in the treatment of various resistant cancers with new immunotherapeutic modalities. These advances have resulted in significant objective durable clinical responses in a subset of cancer patients. These findings strongly suggested that immunotherapy should be considered for the treatment of all subsets of cancer patients. Accordingly, the mechanisms underlying resistance to immunotherapy must be explored and develop new means to target these resistant factors. One of the pivotal resistance mechanisms in the tumor microenvironment (TME) is the high infiltration of tumor-associated macrophages (TAMs) that are highly immunosuppressive and responsible, in large part, of cancer immune evasion. Thus, various approaches have been investigated to target the TAMs to restore the anti-tumor immune response. One approach is to polarize the M2 TAMS to the M1 phenotype that participates in the activation of the anti-tumor response. In this review, we discuss the various and differential properties of the M1 and M2 phenotypes, the molecular signaling pathways that participate in the polarization, and various approaches used to target the polarization of the M2 TAMs into the M1 anti-tumor phenotype. These approaches include inhibitors of histone deacetylases, PI3K inhibitors, STAT3 inhibitors, TLR agonists, and metabolic reprogramming. Clearly, due to the distinct features of various cancers and their heterogeneities, a single approach outlined above might only be effective against some cancers and not others. In addition, targeting by itself may not be efficacious unless used in combination with other therapeutic modalities.

在过去十年中,我们见证了利用新型免疫疗法治疗各种耐药性癌症的新里程碑。这些进展为一部分癌症患者带来了显著而客观的持久临床反应。这些研究结果强烈建议,在治疗所有癌症患者时都应考虑使用免疫疗法。因此,必须探索免疫疗法的耐药机制,并开发出针对这些耐药因素的新方法。肿瘤微环境(TME)中的关键抗药性机制之一是肿瘤相关巨噬细胞(TAMs)的大量浸润。因此,人们研究了各种针对 TAMs 的方法,以恢复抗肿瘤免疫反应。其中一种方法是将 M2 TAMS 极化为参与激活抗肿瘤反应的 M1 表型。在这篇综述中,我们将讨论 M1 和 M2 表型的各种不同特性、参与极化的分子信号通路以及用于将 M2 TAMs 极化为 M1 抗肿瘤表型的各种方法。这些方法包括组蛋白去乙酰化酶抑制剂、PI3K 抑制剂、STAT3 抑制剂、TLR 激动剂和代谢重编程。显然,由于各种癌症的不同特征及其异质性,上述单一方法可能只对某些癌症有效,而对其他癌症无效。此外,除非与其他治疗方法结合使用,否则靶向治疗本身可能并不有效。
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引用次数: 0
Proton Beam Therapy for Breast Cancer. 质子束疗法治疗乳腺癌。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1615/CritRevOncog.2023050319
Seraphina Choi, Isabella Dreyfuss, Crystal Seldon Taswell, Jonathan Cyriac, Michael Butkus, Cristiane Takita

Given the radiobiological and physical properties of the proton, proton beam therapy has the potential to be advantageous for many patients compared with conventional radiotherapy by limiting toxicity and improving patient outcomes in specific breast cancer scenarios.

考虑到质子的放射生物学和物理特性,质子束疗法与传统放疗相比,在特定的乳腺癌治疗方案中具有限制毒性和改善患者预后的潜力。
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引用次数: 0
Immune Evasion in Cancer Is Regulated by Tumor-Asociated Macrophages (TAMs): Targeting TAMs. 癌症中的免疫逃避受肿瘤相关巨噬细胞(TAMs)调控:靶向 TAMs。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1615/CritRevOncog.2024053096
Megan Jung, Benjamin Bonavida

Recent advancements in cancer treatment have explored a variety of approaches to address the needs of patients. Recently, immunotherapy has evolved as an efficacious treatment for various cancers resistant to conventional therapies. Hence, significant milestones in immunotherapy were achieved clinically in a large subset of cancer patients. Unfortunately, some cancer types do not respond to treatment, and among the responsive cancers, some patients remain unresponsive to treatment. Consequently, there is a critical need to examine the mechanisms of immune resistance and devise strategies to target immune suppressor cells or factors, thereby allowing for tumor sensitivity to immune cytotoxic cells. M2 macrophages, also known as tumor-associated macrophages (TAMs), are of interest due to their role in suppressing the immune system and influencing antitumor immune responses through modulating T cell activity and immune checkpoint expression. TAMs are associated with signaling pathways that modulate the tumor microenvironment (TME), contributing to immune evasion. One approach targets TAMs, focusing on preventing the polarization of M1 macrophages into the protumoral M2 phenotype. Other strategies focus on direct or indirect targeting of M2 macrophages through understanding the interaction of TAMs with immune factors or signaling pathways. Clinically, biomarkers associated with TAMs' immune resistance in cancer patients have been identified, opening avenues for intervention using pharmacological agents or immunotherapeutic approaches. Ultimately, these multifaceted approaches are promising in overcoming immune resistance and improving cancer treatment outcomes.

癌症治疗领域的最新进展探索了多种方法来满足患者的需求。最近,免疫疗法已发展成为治疗对传统疗法产生抗药性的各种癌症的一种有效疗法。因此,免疫疗法在大量癌症患者身上取得了重大的临床成果。遗憾的是,有些癌症类型对治疗没有反应,而在有反应的癌症中,有些患者对治疗仍然没有反应。因此,亟需研究免疫抵抗的机制,并制定针对免疫抑制细胞或因子的策略,从而使肿瘤对免疫细胞毒性细胞敏感。M2 巨噬细胞又称肿瘤相关巨噬细胞(TAMs),由于其通过调节 T 细胞活性和免疫检查点表达来抑制免疫系统和影响抗肿瘤免疫反应的作用而备受关注。TAMs与调节肿瘤微环境(TME)的信号通路有关,有助于免疫逃避。一种方法以 TAM 为靶点,重点是防止 M1 巨噬细胞极化为原瘤 M2 表型。其他策略则侧重于通过了解 TAM 与免疫因子或信号通路的相互作用,直接或间接靶向 M2 巨噬细胞。在临床上,与癌症患者 TAMs 免疫抗性相关的生物标志物已被确定,为使用药理制剂或免疫治疗方法进行干预开辟了途径。最终,这些多方面的方法有望克服免疫抵抗,改善癌症治疗效果。
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引用次数: 0
期刊
Critical Reviews in Oncogenesis
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