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Radiomics and Artificial Intelligence in Renal Lesion Assessment. 放射组学和人工智能在肾脏病变评估中的应用
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1615/CritRevOncog.2023051084
Michaela Cellina, Giovanni Irmici, Gianmarco Della Pepa, Maurizio Ce, Vittoria Chiarpenello, Marco Alì, Sergio Papa, Gianpaolo Carrafiello

Radiomics, the extraction and analysis of quantitative features from medical images, has emerged as a promising field in radiology with the potential to revolutionize the diagnosis and management of renal lesions. This comprehensive review explores the radiomics workflow, including image acquisition, feature extraction, selection, and classification, and highlights its application in differentiating between benign and malignant renal lesions. The integration of radiomics with artificial intelligence (AI) techniques, such as machine learning and deep learning, can help patients' management and allow the planning of the appropriate treatments. AI models have shown remarkable accuracy in predicting tumor aggressiveness, treatment response, and patient outcomes. This review provides insights into the current state of radiomics and AI in renal lesion assessment and outlines future directions for research in this rapidly evolving field.

放射组学是从医学影像中提取和分析定量特征,它已成为放射学中一个前景广阔的领域,有望彻底改变肾脏病变的诊断和管理。本综述探讨了放射组学的工作流程,包括图像采集、特征提取、选择和分类,并重点介绍了其在区分肾脏良性和恶性病变方面的应用。将放射组学与机器学习和深度学习等人工智能(AI)技术相结合,有助于患者的管理,并可规划适当的治疗。人工智能模型在预测肿瘤侵袭性、治疗反应和患者预后方面表现出极高的准确性。本综述深入探讨了放射组学和人工智能在肾脏病变评估中的应用现状,并概述了这一快速发展领域的未来研究方向。
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引用次数: 0
Polarization of M2 Tumor-Associated Macrophages (TAMs) in Cancer Immunotherapy. 癌症免疫疗法中 M2 肿瘤相关巨噬细胞 (TAM) 的极化。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1615/CritRevOncog.2024053830
Indy Bui, Benjamin Bonavida

We have witnessed in the last decade new milestones in the treatment of various resistant cancers with new immunotherapeutic modalities. These advances have resulted in significant objective durable clinical responses in a subset of cancer patients. These findings strongly suggested that immunotherapy should be considered for the treatment of all subsets of cancer patients. Accordingly, the mechanisms underlying resistance to immunotherapy must be explored and develop new means to target these resistant factors. One of the pivotal resistance mechanisms in the tumor microenvironment (TME) is the high infiltration of tumor-associated macrophages (TAMs) that are highly immunosuppressive and responsible, in large part, of cancer immune evasion. Thus, various approaches have been investigated to target the TAMs to restore the anti-tumor immune response. One approach is to polarize the M2 TAMS to the M1 phenotype that participates in the activation of the anti-tumor response. In this review, we discuss the various and differential properties of the M1 and M2 phenotypes, the molecular signaling pathways that participate in the polarization, and various approaches used to target the polarization of the M2 TAMs into the M1 anti-tumor phenotype. These approaches include inhibitors of histone deacetylases, PI3K inhibitors, STAT3 inhibitors, TLR agonists, and metabolic reprogramming. Clearly, due to the distinct features of various cancers and their heterogeneities, a single approach outlined above might only be effective against some cancers and not others. In addition, targeting by itself may not be efficacious unless used in combination with other therapeutic modalities.

在过去十年中,我们见证了利用新型免疫疗法治疗各种耐药性癌症的新里程碑。这些进展为一部分癌症患者带来了显著而客观的持久临床反应。这些研究结果强烈建议,在治疗所有癌症患者时都应考虑使用免疫疗法。因此,必须探索免疫疗法的耐药机制,并开发出针对这些耐药因素的新方法。肿瘤微环境(TME)中的关键抗药性机制之一是肿瘤相关巨噬细胞(TAMs)的大量浸润。因此,人们研究了各种针对 TAMs 的方法,以恢复抗肿瘤免疫反应。其中一种方法是将 M2 TAMS 极化为参与激活抗肿瘤反应的 M1 表型。在这篇综述中,我们将讨论 M1 和 M2 表型的各种不同特性、参与极化的分子信号通路以及用于将 M2 TAMs 极化为 M1 抗肿瘤表型的各种方法。这些方法包括组蛋白去乙酰化酶抑制剂、PI3K 抑制剂、STAT3 抑制剂、TLR 激动剂和代谢重编程。显然,由于各种癌症的不同特征及其异质性,上述单一方法可能只对某些癌症有效,而对其他癌症无效。此外,除非与其他治疗方法结合使用,否则靶向治疗本身可能并不有效。
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引用次数: 0
Proton Beam Therapy for Breast Cancer. 质子束疗法治疗乳腺癌。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1615/CritRevOncog.2023050319
Seraphina Choi, Isabella Dreyfuss, Crystal Seldon Taswell, Jonathan Cyriac, Michael Butkus, Cristiane Takita

Given the radiobiological and physical properties of the proton, proton beam therapy has the potential to be advantageous for many patients compared with conventional radiotherapy by limiting toxicity and improving patient outcomes in specific breast cancer scenarios.

考虑到质子的放射生物学和物理特性,质子束疗法与传统放疗相比,在特定的乳腺癌治疗方案中具有限制毒性和改善患者预后的潜力。
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引用次数: 0
Immune Evasion in Cancer Is Regulated by Tumor-Asociated Macrophages (TAMs): Targeting TAMs. 癌症中的免疫逃避受肿瘤相关巨噬细胞(TAMs)调控:靶向 TAMs。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1615/CritRevOncog.2024053096
Megan Jung, Benjamin Bonavida

Recent advancements in cancer treatment have explored a variety of approaches to address the needs of patients. Recently, immunotherapy has evolved as an efficacious treatment for various cancers resistant to conventional therapies. Hence, significant milestones in immunotherapy were achieved clinically in a large subset of cancer patients. Unfortunately, some cancer types do not respond to treatment, and among the responsive cancers, some patients remain unresponsive to treatment. Consequently, there is a critical need to examine the mechanisms of immune resistance and devise strategies to target immune suppressor cells or factors, thereby allowing for tumor sensitivity to immune cytotoxic cells. M2 macrophages, also known as tumor-associated macrophages (TAMs), are of interest due to their role in suppressing the immune system and influencing antitumor immune responses through modulating T cell activity and immune checkpoint expression. TAMs are associated with signaling pathways that modulate the tumor microenvironment (TME), contributing to immune evasion. One approach targets TAMs, focusing on preventing the polarization of M1 macrophages into the protumoral M2 phenotype. Other strategies focus on direct or indirect targeting of M2 macrophages through understanding the interaction of TAMs with immune factors or signaling pathways. Clinically, biomarkers associated with TAMs' immune resistance in cancer patients have been identified, opening avenues for intervention using pharmacological agents or immunotherapeutic approaches. Ultimately, these multifaceted approaches are promising in overcoming immune resistance and improving cancer treatment outcomes.

癌症治疗领域的最新进展探索了多种方法来满足患者的需求。最近,免疫疗法已发展成为治疗对传统疗法产生抗药性的各种癌症的一种有效疗法。因此,免疫疗法在大量癌症患者身上取得了重大的临床成果。遗憾的是,有些癌症类型对治疗没有反应,而在有反应的癌症中,有些患者对治疗仍然没有反应。因此,亟需研究免疫抵抗的机制,并制定针对免疫抑制细胞或因子的策略,从而使肿瘤对免疫细胞毒性细胞敏感。M2 巨噬细胞又称肿瘤相关巨噬细胞(TAMs),由于其通过调节 T 细胞活性和免疫检查点表达来抑制免疫系统和影响抗肿瘤免疫反应的作用而备受关注。TAMs与调节肿瘤微环境(TME)的信号通路有关,有助于免疫逃避。一种方法以 TAM 为靶点,重点是防止 M1 巨噬细胞极化为原瘤 M2 表型。其他策略则侧重于通过了解 TAM 与免疫因子或信号通路的相互作用,直接或间接靶向 M2 巨噬细胞。在临床上,与癌症患者 TAMs 免疫抗性相关的生物标志物已被确定,为使用药理制剂或免疫治疗方法进行干预开辟了途径。最终,这些多方面的方法有望克服免疫抵抗,改善癌症治疗效果。
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引用次数: 0
Particulate Matter and Its Impact on Macrophages: Unraveling the Cellular Response for Environmental Health. 颗粒物质及其对巨噬细胞的影响:揭示细胞对环境健康的反应。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1615/CritRevOncog.2024053305
Nyayapathi Priyanka Priyadarshini, Daka Gopamma, Namuduri Srinivas, Rama Rao Malla, Kolli Suresh Kumar

Particulate matter (PM) imposes a significant impact to environmental health with deleterious effects on the human pulmonary and cardiovascular systems. Macrophages (Mφ), key immune cells in lung tissues, have a prominent role in responding to inhaled cells, accommodating inflammation, and influencing tissue repair processes. Elucidating the critical cellular responses of Mφ to PM exposure is essential to understand the mechanisms underlying PM-induced health effects. The present review aims to give a glimpse on literature about the PM interaction with Mφ, triggering the cellular events causing the inflammation, oxidative stress (OS) and tissue damage. The present paper reviews the different pathways involved in Mφ activation upon PM exposure, including phagocytosis, intracellular signaling cascades, and the release of pro-inflammatory mediators. Potential therapeutic strategies targeting Mφ-mediated responses to reduce PM-induced health effects are also discussed. Overall, unraveling the complex interplay between PM and Mφ sheds light on new avenues for environmental health research and promises to develop targeted interventions to reduce the burden of PM-related diseases on global health.

颗粒物(PM)对环境健康造成了重大影响,并对人类的肺部和心血管系统产生了有害影响。巨噬细胞(Mφ)是肺组织中的关键免疫细胞,在对吸入细胞做出反应、适应炎症和影响组织修复过程方面发挥着重要作用。阐明巨噬细胞(Mφ)对可吸入颗粒物暴露的关键细胞反应对于了解可吸入颗粒物诱发健康影响的机制至关重要。本综述旨在介绍有关可吸入颗粒物与 Mφ 相互作用、引发细胞事件导致炎症、氧化应激(OS)和组织损伤的文献。本文回顾了暴露于 PM 时 Mφ 激活所涉及的不同途径,包括吞噬作用、细胞内信号级联和促炎介质的释放。此外,还讨论了针对 Mφ 介导的反应以减少 PM 引起的健康影响的潜在治疗策略。总之,揭示可吸入颗粒物与 Mφ 之间复杂的相互作用为环境健康研究提供了新的途径,并有望开发出有针对性的干预措施,减轻可吸入颗粒物相关疾病对全球健康造成的负担。
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引用次数: 0
Role of the Tumor Microenvironment in Mediating Resistance to Anti-HER2 Antibodies. 肿瘤微环境在调节抗 HER2 抗体耐药性中的作用
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1615/CritRevOncog.2024053419
Manoj Kumar Gupta, Gayatri Gouda, Ramakrishna Vadde

Breast cancer (BC) is the most common cancer and the second leading cause of cancer-related deaths in women globally. Despite advancements in treatment strategies, many patients still develop challenging-to-treat metastatic disease. The development and progression of tumors are influenced by genetic/epigenetic changes within tumor cells and alterations in the tumor microenvironment (TME) through a dynamic communication. The TME comprises various elements, including immune, tumor, and stromal cells. Tumor cells at the core of the TME orchestrate complex signals that lead to tumor growth, survival, and resistance to treatment. Human epidermal growth factor receptor 2 (HER2) is overexpressed in a significant proportion of invasive breast cancers, influencing prognosis and prediction. Novel therapeutic approaches target HER2-positive breast cancers by leveraging HER2-targeted therapeuirtcs such as antibody-drug conjugates, monoclonal antibodies, and tyrosine kinase inhibitors. The TME in HER2-positive breast cancers also involves cancer-associated fibroblasts and cancer-associated adipocytes, which play critical roles in tumor progression and therapy resistance. The immune microenvironment also plays a significant role, with studies indicating its impact on outcomes in HER2-positive breast cancer. Trastuzumab, one of the first monoclonal antibodies targeting HER2, has shown promise in enhancing survival rates in HER2-overexpressing breast cancer. Integration of trastuzumab with chemotherapy has demonstrated significant enhancements in disease-free survival as well as overall survival rates during early breast cancer treatment. Trastuzumab functions by inhibiting HER2 signaling pathways, leading to cell cycle arrest and induction of apoptosis. Overall, understanding the complex interplay between HER2, the tumor microenvironment, and therapeutic interventions is essential for improving outcomes in HER2-positive BC.

乳腺癌(BC)是最常见的癌症,也是全球女性癌症相关死亡的第二大原因。尽管治疗策略取得了进步,但许多患者仍会出现难以治疗的转移性疾病。肿瘤的发生和发展受肿瘤细胞内遗传/表观遗传变化和肿瘤微环境(TME)变化的影响,两者之间存在着动态交流。肿瘤微环境由各种因素组成,包括免疫细胞、肿瘤细胞和基质细胞。位于 TME 核心的肿瘤细胞会发出复杂的信号,导致肿瘤生长、存活和抗药性。人类表皮生长因子受体 2(HER2)在很大一部分浸润性乳腺癌中过度表达,影响预后和预测。新的治疗方法以 HER2 阳性乳腺癌为目标,利用 HER2 靶向治疗药物,如抗体药物共轭物、单克隆抗体和酪氨酸激酶抑制剂。HER2 阳性乳腺癌的 TME 还包括癌症相关成纤维细胞和癌症相关脂肪细胞,它们在肿瘤进展和耐药性方面发挥着关键作用。免疫微环境也发挥着重要作用,研究表明它对 HER2 阳性乳腺癌的预后有影响。曲妥珠单抗是首批靶向 HER2 的单克隆抗体之一,在提高 HER2 表达阳性乳腺癌患者的生存率方面已显示出希望。在早期乳腺癌治疗过程中,曲妥珠单抗与化疗相结合可显著提高无病生存率和总生存率。曲妥珠单抗通过抑制 HER2 信号通路发挥作用,导致细胞周期停滞并诱导细胞凋亡。总之,了解 HER2、肿瘤微环境和治疗干预之间复杂的相互作用对于改善 HER2 阳性 BC 的治疗效果至关重要。
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引用次数: 0
Machine Evaluation of Catchment Area Relevance through Text Mining. 通过文本挖掘对集水区相关性进行机器评估。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1615/CritRevOncog.2023049949
Philip A Arlen, Joseph Chakko, Geoffrey DeGennaro, Erin Kobetz, Brandon Mahal

The University of Miami Sylvester Comprehensive Cancer Center Community Outreach and Engagement Office has developed an algorithm to aid in identifying catchment area relevant trials. We have developed this tool to capture a catchment area (South Florida) that represents the most racially, ethnically, and geographically diverse region in the US. Unfortunately, the area's tumor burden is also significant with many notable disparities, necessitating a prioritization of trials within Sylvester's catchment area. These trials address the needs of the population Sylvester serves by targeting cancers that are locally prevalent.

迈阿密大学西尔维斯特综合癌症中心社区外展与参与办公室开发了一种算法,用于帮助确定与服务区相关的试验。我们开发这一工具的目的是为了捕捉代表美国种族、民族和地理多样性最丰富的地区(南佛罗里达)。不幸的是,该地区的肿瘤负担也很重,存在许多明显的差异,因此有必要优先考虑西尔维斯特服务区内的试验。这些试验针对当地流行的癌症,满足了西尔维斯特所服务人群的需求。
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引用次数: 0
The Genetic Paradigm of Hereditary Breast and Ovarian Cancer (HBOC) in the Afro-Caribbean Population. 非洲-加勒比人口中遗传性乳腺癌和卵巢癌 (HBOC) 的基因范例。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1615/CritRevOncog.2024051599
Danielle Cerbon, Daphanie Taylor, Priscila Barreto-Coelho, Estelamari Rodriguez, Matthew Schlumbrecht, Judith Hurley, Sophia H L George

Differences in tumor biology and genetic predisposition have been suggested as factors influencing overall survival and increased mortality in Black breast and ovarian cancer patients. Therefore, it is key to evaluate genetic susceptibilities in Afro-Caribbean patients because the black population in the US is not homogeneous. Identifying a high incidence of hereditary breast and ovarian cancer (HBOC) in Afro-Caribbean countries can lead to understanding the pattern of inherited traits in US-Caribbean immigrants and their subsequent generations. The paucity of projects studying the genetic landscape in these populations makes it difficult to design studies aimed at optimizing screening and prophylaxis strategies, which in turn, improve survival and mortality rates. This scoping review identifies and categorizes current research on the genetic paradigm of HBOC in the Afro-Caribbean population. We performed an evaluation of the evidence and generated a summary of findings according to preferred reporting items for systematic review and meta-analysis (PRISMA) Extension for Scoping Reviews guidelines. We included articles that assessed the incidence and prevalence of pathologic germline mutations and experience/barriers for genetic testing in Afro-Caribbean Countries and US-Caribbean patients. Our results highlight countries where genetic landscapes remain severely understudied and support recommending multigene testing in Caribbean-born patients. They highlight a need for further research on the genetic paradigm of HBOC in the Afro-Caribbean population to improve genetic testing/counseling and the subsequent adoption of early detection and risk reduction strategies.

肿瘤生物学和遗传易感性的差异被认为是影响黑人乳腺癌和卵巢癌患者总生存期和死亡率增加的因素。因此,评估非裔加勒比海人患者的遗传易感性至关重要,因为美国的黑人人口并不单一。在非洲-加勒比国家发现遗传性乳腺癌和卵巢癌(HBOC)的高发病率可帮助了解美国-加勒比移民及其后代的遗传特征模式。由于研究这些人群遗传情况的项目很少,因此很难设计旨在优化筛查和预防策略的研究,而这反过来又会提高存活率和死亡率。本范围界定综述对当前有关非裔加勒比海人 HBOC 遗传范式的研究进行了识别和分类。我们根据系统综述和荟萃分析首选报告项目(PRISMA)扩展范围综述指南对证据进行了评估,并生成了研究结果摘要。我们纳入了评估非洲-加勒比海国家和美国-加勒比海患者病理种系突变发生率和流行率以及基因检测经验/障碍的文章。我们的研究结果突出表明,在一些国家,对遗传地貌的研究仍然严重不足,因此我们建议对加勒比海出生的患者进行多基因检测。这些结果突出表明,有必要进一步研究非洲-加勒比人口中 HBOC 的遗传模式,以改进基因检测/咨询,并随后采取早期检测和降低风险的策略。
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引用次数: 0
In Loving Memory of Dr. Rana Lynn Samuels-Ofran and Dr. Beth Sharon Samuels. 深切悼念 Rana Lynn Samuels-Ofran 博士和 Beth Sharon Samuels 博士。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1615/CritRevOncog.v29.i3.90
Benjamin Bonavida, Ofra Bonavida
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引用次数: 0
Targeting the Depletion of M2 Macrophages: Implication in Cancer Immunotherapy. 靶向消耗 M2 巨噬细胞:癌症免疫疗法的意义
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1615/CritRevOncog.2024053580
Talia Festekdjian, Benjamin Bonavida

We have witnessed the emergence of immunotherapy against various cancers that resulted in significant clinical responses and particularly in cancers that were resistant to chemotherapy. These milestones have ignited the development of novel strategies to boost the anti-tumor immune response for immune-suppressed tumors in the tumor microenvironment (TME). Tumor-associated macrophages (TAMs) are the most abundant cells in the TME, and their frequency correlates with poor prognosis. Hence, several approaches have been developed to target TAMs in effort to restore the anti-tumor immune response and inhibit tumor growth and metastasis. One approach discussed herein is targeting TAMs via their depletion. Several methods have been reported for TAMs depletion including micro-RNAs, transcription factors (e.g., PPARγ, KLF4, STAT3, STAT6, NF-κB), chemokines and chemokine receptors, antibodies-mediated blocking the CSF-1/CSF-1R pathway, nanotechnology, and various combination treatments. In addition, various clinical trials are currently examining the targeting of TAMs. Many of these methods also have side effects that need to be monitored and reduced. Future perspectives and directions are discussed.

我们见证了针对各种癌症的免疫疗法的出现,这些疗法带来了显著的临床反应,尤其是对化疗产生抗药性的癌症。这些里程碑式的进展推动了新型策略的发展,以增强肿瘤微环境(TME)中免疫抑制肿瘤的抗肿瘤免疫反应。肿瘤相关巨噬细胞(TAMs)是肿瘤微环境中最丰富的细胞,其频率与预后不良相关。因此,人们开发了多种方法来靶向 TAMs,以恢复抗肿瘤免疫反应,抑制肿瘤生长和转移。本文讨论的一种方法是通过消耗 TAMs 来靶向治疗。目前已报道了几种消耗 TAMs 的方法,包括微 RNA、转录因子(如 PPARγ、KLF4、STAT3、STAT6、NF-κB)、趋化因子和趋化因子受体、抗体介导的 CSF-1/CSF-1R 通路阻断、纳米技术和各种联合疗法。此外,各种临床试验目前正在研究如何靶向 TAMs。其中许多方法也有副作用,需要加以监测和减少。本文讨论了未来的前景和方向。
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引用次数: 0
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Critical Reviews in Oncogenesis
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