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The pluripotency state of human embryonic stem cells derived from single blastomeres of eight-cell embryos 从八个细胞胚胎的单个胚泡中提取的人类胚胎干细胞的全能性状态。
IF 3.9 4区 生物学 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-06-22 DOI: 10.1016/j.cdev.2024.203935

Human embryonic stem cells (hESCs) derived from blastocyst stage embryos present a primed state of pluripotency, whereas mouse ESCs (mESCs) display naïve pluripotency. Their unique characteristics make naïve hESCs more suitable for particular applications in biomedical research. This work aimed to derive hESCs from single blastomeres and determine their pluripotency state, which is currently unclear. We derived hESC lines from single blastomeres of 8-cell embryos and from whole blastocysts, and analysed several naïve pluripotency indicators, their transcriptomic profile and their trilineage differentiation potential. No significant differences were observed between blastomere-derived hESCs (bm-hESCs) and blastocyst-derived hESCs (bc-hESCs) for most naïve pluripotency indicators, including TFE3 localization, mitochondrial activity, and global DNA methylation and hydroxymethylation, nor for their trilineage differentiation potential. Nevertheless, bm-hESCs showed an increased single-cell clonogenicity and a higher expression of naïve pluripotency markers at early passages than bc-hESCs. Furthermore, RNA-seq revealed that bc-hESCs overexpressed a set of genes related to the post-implantational epiblast. Altogether, these results suggest that bm-hESCs, although displaying primed pluripotency, would be slightly closer to the naïve end of the pluripotency continuum than bc-hESCs.

从胚泡期胚胎中提取的人类胚胎干细胞(hESCs)具有原始多能性,而小鼠胚胎干细胞(mESCs)则具有幼稚多能性。它们的独特特性使天真的 hESCs 更适合生物医学研究中的特定应用。这项工作旨在从单个胚泡中提取 hESCs,并确定它们的多能性状态(目前尚不清楚)。我们从 8 细胞胚胎的单个胚泡和整个胚泡中提取了 hESC 株系,并分析了几种幼稚多能性指标、它们的转录组图谱及其三系分化潜能。在大多数幼稚多能性指标(包括 TFE3 定位、线粒体活性、全局 DNA 甲基化和羟甲基化)及其三系分化潜能方面,囊胚来源的 hESCs(bm-hESCs)与囊胚来源的 hESCs(bc-hESCs)之间未观察到明显差异。不过,与 bc-hESCs 相比,bm-hESCs 的单细胞克隆性增强,早期幼稚多能性标志物的表达量更高。此外,RNA-seq显示,bc-hESCs过度表达了一组与植入后上胚层相关的基因。总之,这些结果表明,bm-hESCs 虽然显示出原始多能性,但比 bc-hESCs 更接近多能性连续体的幼稚端。
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引用次数: 0
The Oct4-related PouV gene, pou5f3, mediates isthmus development in zebrafish by directly and dynamically regulating pax2a 与 Oct4 相关的 PouV 基因 pou5f3 通过直接动态调节 pax2a 来介导斑马鱼峡部的发育。
IF 3.9 4区 生物学 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-06-20 DOI: 10.1016/j.cdev.2024.203933

Using a transgenic zebrafish line harboring a heat-inducible dominant-interference pou5f3 gene (en-pou5f3), we reported that this PouV gene is involved in isthmus development at the midbrain-hindbrain boundary (MHB), which patterns the midbrain and cerebellum. Importantly, the functions of pou5f3 reportedly differ before and after the end of gastrulation. In the present study, we examined in detail the effects of en-pou5f3 induction on isthmus development during embryogenesis. When en-pou5f3 was induced around the end of gastrulation (bud stage), the isthmus was abrogated or deformed by the end of somitogenesis (24 hours post-fertilization). At this stage, the expression of MHB markers –– such as pax2a, fgf8a, wnt1, and gbx2 –– was absent in embryos lacking the isthmus structure, whereas it was present, although severely distorted, in embryos with a deformed isthmus. We further found that, after en-pou5f3 induction at late gastrulation, pax2a, fgf8a, and wnt1 were immediately and irreversibly downregulated, whereas the expression of en2a and gbx2 was reduced only weakly and slowly. Induction of en-pou5f3 at early somite stages also immediately downregulated MHB genes, particularly pax2a, but their expression was restored later. Overall, the data suggested that pou5f3 directly upregulates at least pax2a and possibly fgf8a and wnt1, which function in parallel in establishing the MHB, and that the role of pou5f3 dynamically changes around the end of gastrulation. We next examined the transcriptional regulation of pax2a using both in vitro and in vivo reporter analyses; the results showed that two upstream 1.0-kb regions with sequences conserved among vertebrates specifically drove transcription at the MHB. These reporter analyses confirmed that development of the isthmic organizer is regulated by PouV through direct regulation of pax2/pax2a in vertebrate embryos.

我们利用携带热诱导显性干扰pou5f3基因(en-pou5f3)的转基因斑马鱼品系,报道了该PouV基因参与了中脑-后脑边界(MHB)的峡部发育,从而形成了中脑和小脑。重要的是,据报道 pou5f3 在胃形成结束前后的功能有所不同。在本研究中,我们详细研究了胚胎发育过程中诱导 en-pou5f3 对峡部发育的影响。在胚胎发育末期(芽期)前后诱导en-pou5f3时,峡部在体细胞发生末期(受精后24小时)已经消失或变形。在这一阶段,缺乏峡部结构的胚胎中没有MHB标记物(如pax2a、fff8a、wnt1和gbx2)的表达,而有畸形峡部的胚胎中则有MHB标记物的表达,但严重扭曲。我们还发现,在胚胎发育后期诱导 en-pou5f3 后,pax2a、fff8a 和 wnt1 的表达立即出现不可逆的下调,而 en2a 和 gbx2 的表达仅出现微弱且缓慢的下降。在体细胞早期阶段诱导 en-pou5f3 也会立即下调 MHB 基因,尤其是 pax2a,但它们的表达随后会恢复。总之,这些数据表明,pou5f3至少直接上调pax2a,也可能上调fff8a和wnt1,它们在建立MHB的过程中并行发挥作用,而且pou5f3的作用在胃形成末期会发生动态变化。接下来,我们利用体外和体内报告基因分析研究了pax2a的转录调控;结果表明,两个上游1.0 kb区域的序列在脊椎动物中是保守的,它们特异性地驱动了MHB的转录。这些报告分析证实,在脊椎动物胚胎中,峡部组织器的发育是由PouV通过直接调控pax2/pax2a来调控的。
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引用次数: 0
Trusting the forces of our cell lines 相信我们细胞系的力量
IF 3.9 4区 生物学 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-06-07 DOI: 10.1016/j.cdev.2024.203931

Cells isolated from their native tissues and cultured in vitro face different selection pressures than those cultured in vivo. These pressures induce a profound transformation that reshapes the cell, alters its genome, and transforms the way it senses and generates forces. In this perspective, we focus on the evidence that cells cultured on conventional polystyrene substrates display a fundamentally different mechanobiology than their in vivo counterparts. We explore the role of adhesion reinforcement in this transformation and to what extent it is reversible. We argue that this mechanoadaptation is often understood as a mechanical memory. We propose some strategies to mitigate the effects of on-plastic culture on mechanobiology, such as organoid-inspired protocols or mechanical priming. While isolating cells from their native tissues and culturing them on artificial substrates has revolutionized biomedical research, it has also transformed cellular forces. Only by understanding and controlling them, we can improve their truthfulness and validity.

从原生组织中分离出来并在体外培养的细胞与在体内培养的细胞面临着不同的选择压力。这些压力会诱发深刻的转变,重塑细胞,改变其基因组,并改变其感知和产生力的方式。在这一视角中,我们将重点关注在传统聚苯乙烯基底上培养的细胞与体内培养的细胞表现出根本不同的机械生物学的证据。我们探讨了粘附强化在这种转变中的作用,以及这种作用在多大程度上是可逆的。我们认为,这种机械适应通常被理解为一种机械记忆。我们提出了一些策略来减轻塑性培养对机械生物学的影响,例如类器官启发方案或机械引物。将细胞从其原生组织中分离出来并在人工基质上进行培养的方法在彻底改变生物医学研究的同时,也改变了细胞的作用力。只有了解和控制它们,我们才能提高它们的真实性和有效性。
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引用次数: 0
A double-negative feedback loop mediated by non-coding RNAs contributes to tooth morphogenesis 非编码 RNA 介导的双负反馈环有助于牙齿的形态发生。
IF 3.9 4区 生物学 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-06-07 DOI: 10.1016/j.cdev.2024.203932

Tooth morphogenesis is a critically ordered process manipulated by a range of signaling factors. Particularly, the involvement of fine-tuned signaling mediated by non-coding RNAs has been of longstanding interest. Here, we revealed a double-negative feedback loop acted by a long non-coding RNA (LOC102159588) and a microRNA (miR-133b) that modulated tooth morphogenesis of miniature swine. Mechanistically, miR-133b repressed the transcription of LOC102159588 through downstream target Sp1. Conversely, LOC102159588 not only inhibited the transport of pre-miR-133b from the nucleus to the cytoplasm by regulating exportin-5 but also served as a sponge in the cytoplasm, suppressing functional miR-133b. Together, the double-negative feedback loop maintained normal tooth morphogenesis by modulating endogenous apoptosis. Related disruptions would lead to an arrest of tooth development and may result in tooth malformations.

牙齿的形态发生是一个关键的有序过程,受到一系列信号因子的操纵。特别是,由非编码 RNA 介导的微调信号的参与一直备受关注。在这里,我们揭示了一个由长非编码 RNA(LOC102159588)和 microRNA(miR-133b)作用的双负反馈环,它调控了微型猪的牙齿形态发生。从机制上讲,miR-133b 通过下游靶标 Sp1 抑制 LOC102159588 的转录。相反,LOC102159588 不仅通过调节 exportin-5 抑制前 miR-133b 从细胞核向细胞质的转运,还在细胞质中充当海绵,抑制功能性 miR-133b。双重负反馈环共同通过调节内源性凋亡来维持正常的牙齿形态发生。相关的干扰会导致牙齿发育停滞,并可能导致牙齿畸形。
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引用次数: 0
The significance of Ethel Browne's research on Hydra for the organizer concept 埃塞尔-布朗关于九头蛇的研究对组织者概念的意义。
IF 3.9 4区 生物学 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-06-01 DOI: 10.1016/j.cdev.2024.203907

This article focuses on the roots of the organizer concept, which was developed by Hans Spemann during his studies of early embryonic development in amphibians. The fundamental properties of this axis-inducing signaling center have been elucidated through pioneering molecular research by Eddy De Robertis' laboratory and other researchers. Evolutionary comparisons have disclosed the presence of this signaling center, involving the interaction of Wnt and TGF-beta signaling pathways, existed not only in vertebrates but also in basal Metazoa such as Cnidaria. – Notably, even prior to the groundbreaking experiments conducted by Hilde Mangold and Hans Spemann, Ethel Browne conducted similar transplantation experiments on Hydra polyps. They were performed under the guidance of Thomas H Morgan and in the laboratory of Edmund B Wilson. Howard Lenhoff was the first to draw connections between Ethel Browne's transplantation experiments and those of Spemann and Mangold, igniting a vivid debate on the precedence of the organizer concept and its recognition in Nobel Prize considerations. This review critically compares the experiments conducted by Spemann and Mangold with those preceding their seminal work, concluding that the organizer concept clearly builds upon earlier research aimed at understanding developmental gradients, such as in the simple model Hydra. However, these approaches were not pursued further by Morgan, who shifted his focus towards unraveling the genetic control of development in flies, an approach that ultimately revealed the molecular identity of the Spemann organizer in vertebrates.

本文重点介绍组织者概念的起源,这一概念是汉斯-斯佩曼(Hans Spemann)在研究两栖动物早期胚胎发育过程中提出的。通过 Eddy De Robertis 实验室和其他研究人员的开创性分子研究,这一轴心诱导信号中心的基本特性已被阐明。通过进化比较发现,这种涉及 Wnt 和 TGF-beta 信号通路相互作用的信号中心不仅存在于脊椎动物中,而且也存在于基础元胞动物(如蛇纲动物)中。- 值得注意的是,甚至在希尔德-曼戈尔德(Hilde Mangold)和汉斯-斯佩曼(Hans Spemann)进行开创性实验之前,艾瑟尔-布朗(Ethel Browne)就对水螅进行了类似的移植实验。这些实验是在托马斯-H-摩根(Thomas H Morgan)的指导下,在埃德蒙-B-威尔逊(Edmund B Wilson)的实验室中进行的。霍华德-伦霍夫(Howard Lenhoff)率先将埃塞尔-布朗的移植实验与斯佩曼和芒果德的实验联系起来,从而引发了一场关于组织者概念的优先性及其在诺贝尔奖评选中的认可度的生动辩论。这篇综述对斯佩曼和曼戈尔德进行的实验与他们开创性工作之前的实验进行了批判性比较,得出结论认为,组织者概念显然是建立在早期旨在理解发育梯度的研究基础之上的,例如在简单的水螅模型中。然而,摩根并没有进一步研究这些方法,他将重点转向了揭示苍蝇发育的遗传控制,这一方法最终揭示了脊椎动物中斯佩曼组织器的分子特征。
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引用次数: 0
Never-ending story of Brachyury: From short-tailed mice to tailless primates 腕足动物的故事永无止境:从短尾鼠到无尾灵长类动物
IF 3.9 4区 生物学 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-06-01 DOI: 10.1016/j.cdev.2023.203896

The history of developmental biology starts from the almost simultaneous discoveries of the Organizer of axial structures in amphibians by Spemann and Mangold in Freiburg and of the Brachyury mutant in mammals by the Dobrovolskaya-Zavadskaya laboratory at the Curie Institute and its follow-up studies in the Leslie Dunn laboratory at Columbia University. Following the Organizer's discovery, the inductive activity of several other embryonic tissues was found, including that of the ear primordium by Boris Balinsky in Kiev. Initially, the experimental embryological and genetic lines of research existed independently of each other, but after they met at the bench of Salome Gluecksohn, they strengthened and cross-fertilized each other, eventually leading to developmental genetics, which later became known as developmental biology. It appears that the regulatory activities of Brachyury and related T-box proteins in general are at the heart of the development of all vertebrates. These activities are fundamental and have been discovered in several model organisms subjected to mutagenesis, exemplified by the story of George Streisinger's discovery of the no tail mutant in zebrafish. This essay describes the history of Brachyury studies, their connection to an idea of embryonic induction by Organizer, and an impact of Brachyury and related genes on various fields of research from embryology and cell biology to medical genetics and evolutionary theory.

发育生物学的历史始于弗莱堡的斯佩曼(Spemann)和曼戈尔德(Mangold)几乎同时发现的两栖动物中的组织器轴向结构,以及居里研究所的多布罗沃尔斯卡娅-扎瓦茨卡娅实验室发现的哺乳动物中的布拉希里突变体及其在哥伦比亚大学莱斯利-邓恩实验室的后续研究。继组织者的发现之后,基辅的鲍里斯-巴林斯基(Boris Balinsky)也发现了其他几种胚胎组织的诱导活动,包括耳原基的诱导活动。最初,实验胚胎学和遗传学的研究路线是相互独立的,但在萨洛梅-格鲁克松的工作台上相遇后,它们相互加强、相互促进,最终形成了发育遗传学,也就是后来的发育生物学。Brachyury 和相关 T-box 蛋白的调控活动似乎是所有脊椎动物发育的核心。这些活动是基础性的,并已在多种经诱变的模式生物中被发现,乔治-斯特莱辛格(George Streisinger)发现斑马鱼无尾突变体的故事就是一个例子。这篇文章描述了 Brachyury 研究的历史、它们与组织者胚胎诱导思想的联系,以及 Brachyury 和相关基因对从胚胎学和细胞生物学到医学遗传学和进化论等各个研究领域的影响。
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引用次数: 0
The Spemann-Mangold organizer discovery and society 斯佩曼-曼戈尔德组织者的发现与社会
IF 3.9 4区 生物学 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-06-01 DOI: 10.1016/j.cdev.2024.203906

This paper analyzes the influence of Hans Spemann and Hilde Mangold's discovery of the embryonic organizer on society outside the narrower confines of embryology. It begins by overviewing how in the 1920s–1930s, the organizer discovery fit well into the agenda of both right-wing and left-wing political camps, as it supported holistic theories of biological development that aligned with their ideological views. The paper then explores the organizer's influence on the formation and interdisciplinary discussions of the 1930s Cambridge Theoretical Biology Club. Club member C.H. Waddington's concept of the epigenetic landscape, inspired in part by Spemann and Mangold's work, went on to impact diverse fields including mathematics, psychology, anthropology, architecture, and art. Examples include mathematician René Thom's catastrophe landscapes and the field of ekistics (the science of human settlements). Spemann and Mangold's creation of an embryo chimera by combining tissues from different newt species also helped shape philosophers' and artists' understanding of the relationship between nature and technology as an integrated whole rather than separate entities. Additionally, Spemann's embryonic field concept helped influence field theories in other areas of science, and thinkers have pointed out metaphorical similarities between the organizer experiment and philosophical dialectics, film editing, or historical events. However, several factors likely limited the long-term societal impact of Spemann's holistic perspective, notably the rise of molecular biology and DNA-centric reductionist views of biology in the mid-late 20th century. While such reductionism still dominates public perceptions of biology, there seems to be a renewed openness to holistic perspectives reminiscent of Spemann's views.

本文分析了汉斯-斯佩曼(Hans Spemann)和希尔德-曼戈尔德(Hilde Mangold)发现的胚胎组织器对狭义胚胎学之外的社会的影响。论文首先概述了在二十世纪二十年代至三十年代,胚胎组织器的发现是如何与右翼和左翼政治阵营的议程相吻合的,因为它支持符合他们意识形态观点的生物发育整体理论。本文随后探讨了组织者对 20 世纪 30 年代剑桥理论生物学俱乐部的成立和跨学科讨论的影响。俱乐部成员 C.H. 瓦丁顿(C.H. Waddington)的 "表观遗传景观"(epigenetic landscape)概念部分受到了斯佩曼和曼戈尔德工作的启发,并对数学、心理学、人类学、建筑学和艺术等多个领域产生了影响。例如数学家勒内-托姆(René Thom)的灾难景观(castrophe landscapes)和人类居住科学(ekistics)领域。斯佩曼和曼戈尔德将不同蝾螈物种的组织结合在一起,创造出胚胎嵌合体,这也有助于哲学家和艺术家将自然与技术之间的关系理解为一个整体,而不是独立的实体。此外,斯佩曼的胚胎场概念还影响了其他科学领域的场理论,思想家们指出了组织者实验与哲学辩证法、电影剪辑或历史事件之间的隐喻相似性。然而,有几个因素可能限制了斯佩曼的整体观对社会的长期影响,特别是分子生物学和以 DNA 为中心的生物学还原论在 20 世纪中后期的兴起。虽然这种还原论仍然主导着公众对生物学的看法,但人们似乎重新对斯佩曼的整体观持开放态度。
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引用次数: 0
Reprint of: Cells & Development: Moving forward and upward 重印本:细胞与发育》:向前,向上。
IF 3.9 4区 生物学 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-06-01 DOI: 10.1016/j.cdev.2024.203938
Roberto Mayor
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引用次数: 0
Hilde Mangold: Original microscope slides and records of the gastrula organizer experiments 希尔德-曼戈尔德原始显微镜幻灯片和胃组织器实验记录。
IF 3.9 4区 生物学 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-06-01 DOI: 10.1016/j.cdev.2024.203909

The discovery of the amphibian gastrula organizer and its publication by Hans Spemann and Hilde Mangold in 1924 is a foundation of experimental embryology, and has shaped our understanding of embryonic induction and pattern formation in vertebrates until today. The original publication is a piece of scientific art, characterized by the meticulous hand drawings by Hilde Mangold, as well as the text that develops mechanistic concepts of modern embryology. While historic microphotographs of specimens got lost, the original microscope slides and Hilde Mangold's laboratory notebook have been secured in embryological collections until today. Here, we make the original data of the six embryonic specimens reported in 1924, as well as the laboratory notebook, available in an accessible digital format. Together, these data shed light on the scientific process that led to the discovery, and should help to make the experiments on the most important signalling center in early vertebrate development transparent for generations of embryologists to come.

汉斯-斯佩曼(Hans Spemann)和希尔德-曼戈尔德(Hilde Mangold)于 1924 年发现并发表的两栖动物胃组织器是实验胚胎学的基础,直到今天还影响着我们对脊椎动物胚胎诱导和模式形成的理解。最初的出版物是一件科学艺术品,其特点是由希尔德-曼戈尔德(Hilde Mangold)绘制的细致手绘图,以及提出现代胚胎学机理概念的文字。虽然历史上的标本显微照片已经遗失,但原始显微镜载玻片和希尔德-曼戈尔德的实验室笔记本却一直保存在胚胎学藏品中。在此,我们将 1924 年报告的六个胚胎标本的原始数据和实验室笔记本以可访问的数字格式提供给大家。这些数据共同揭示了导致这一发现的科学过程,并有助于使有关早期脊椎动物发育过程中最重要的信号中心的实验对未来几代胚胎学家透明化。
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引用次数: 0
Reprint of: Moving forward 重印:向前迈进。
IF 3.9 4区 生物学 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-06-01 DOI: 10.1016/j.cdev.2024.203937
Roberto Mayor (Editor in Chief of CELLS & DEVELOPMENT)
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引用次数: 0
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Cells and Development
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