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Experimental and theoretical computational study of corrosion inhibitors in the cobalt bulk chemical mechanical polishing (CMP) process 钴块体化学机械抛光 (CMP) 过程中腐蚀抑制剂的实验和理论计算研究
IF 5.3 2区 化学 Q2 CHEMISTRY, PHYSICAL Pub Date : 2024-08-30 DOI: 10.1016/j.molliq.2024.125865

Cobalt is a potential substitute for copper as local interconnects in sub-10 nm interconnects, the chemical mechanical polishing (CMP) of which is quite challenging due to the high chemical reactivity of Co. By using a combination of experiments and theoretical calculations, the optimum corrosion inhibitor of Co is identified and the corrosion inhibition mechanism of TTLYK on Co is further investigated. It investigates the effects of various corrosion inhibitors, including potassium oleate, dodecyl benzene sulphonic acid, octyl hydroxamic acid, and 2,2′-[[(methyl-1H-benzotriazol-1yl) methyl] imino] bis-ethanol (TTLYK) on Co through chemical mechanical polishing and static etching experiments. The results show that among various corrosion inhibitors, TTLYK presents the best corrosion inhibition effect. When the basic slurry contains 10 mM TTLYK, the corrosion inhibition efficiency could reach 96.23 %, the material removal rates of Co is 161.79 nm/min, the static etching rates is 0.85 nm/min, and the material removal selectivity ratio of Co and Ti is 39:1. The results fully meet the requirements of the Co bulk CMP process. It is revealed TTLYK could form a protective layer with a synergistic physical and chemical adsorption on Co, in which the chemical adsorption occurs through the formation of CoN bonds. The adsorption of TTLYK could decelerate the transformation of CoO and Co(OH)2 to Co3O4, and the as formed Co-TTLYK complex provides the main corrosion inhibition.

在 10 纳米以下的互连器件中,钴是铜的潜在替代品,由于钴的化学反应活性较高,对其进行化学机械抛光 (CMP) 相当具有挑战性。通过化学机械抛光和静态蚀刻实验,研究了油酸钾、十二烷基苯磺酸、辛基羟肟酸和 2,2′-[[(甲基-1H-苯并三唑-1 基)甲基]亚氨基]双乙醇(TTLYK)等多种缓蚀剂对 Co 的影响。结果表明,在各种缓蚀剂中,TTLYK 的缓蚀效果最好。当基本浆液中含有 10 mM TTLYK 时,缓蚀效率可达 96.23 %,Co 的材料去除率为 161.79 nm/min,静态蚀刻率为 0.85 nm/min,Co 和 Ti 的材料去除选择性比为 39:1。结果完全符合 Co 体积 CMP 工艺的要求。研究表明,TTLYK 可以在 Co 上形成物理和化学协同吸附的保护层,其中化学吸附是通过形成 CoN 键实现的。TTLYK 的吸附可以减缓 CoO 和 Co(OH)2 向 Co3O4 的转化,形成的 Co-TTLYK 复合物是主要的缓蚀剂。
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引用次数: 0
A mixed solvent system of amino crown ether and ionic liquids for a high-efficient extraction of cesium 用于高效萃取铯的氨基冠醚和离子液体混合溶剂系统
IF 5.3 2区 化学 Q2 CHEMISTRY, PHYSICAL Pub Date : 2024-08-30 DOI: 10.1016/j.molliq.2024.125868

Efficient extraction of Cs+ from aqueous solution was investigated by liquid–liquid extraction based on ionic liquids (ILs). In this study, Di(aminobenzo)-18-crown-6 (DAB18C6) was used as the extractant and three ILs (1-butyl-3-methylimidazolium hexafluorophosphate ([C4mim][PF6]), 1-hexyl-3-methylimidazolium hexafluorophosphate ([C6mim][PF6]), and 1-butyl-3-methylimidazolium bis-trifluoromethyl sulfonamide ([C4mim][NTf2])) were employed as co-extractants in the construction of a liquid–liquid extraction system for efficient and selective extraction of Cs+ from aqueous solutions. It was demonstrated that the DAB18C6-[C4mim][NTf2] mixed solvent system at 0.12 mol/L DAB18C6, a mass ratio of ILs/CHCl3 of 1:4 and a volumetric ratio of O/A of 1:1 exhibited a high % extraction of Cs+ up to 99.94 %, with a higher selectivity for Cs+ relative to coexisting ions such as K+ (βCs/K = 1216.7) and Rb+ (βCs/Rb = 139.03). The high selectivity of the extraction system for Cs+ was attributed to the lower hydration binding energy of Cs+ (−366.51 kJ/mol) and the stronger interaction between DAB18C6 and Cs+, g(r) = 12.7. Further, the hydrogen bonding interaction between the amino crown ether and ionic liquid increases the viscosity and surface tension of the extraction system, thus enhancing the stability of the system. Noteworthy, the most stable structure formed by DAB18C6-Cs+-[NTF2] is attributed to cation exchange. In summary, this study demonstrates the great potential for efficient separation and extraction of cesium from aqueous solutions.

基于离子液体(ILs)的液液萃取法研究了从水溶液中高效萃取Cs+的方法。该研究使用二(氨基苯并)-18-冠醚-6(DAB18C6)作为萃取剂,并使用了三种离子液体(1-丁基-3-甲基咪唑鎓六氟磷酸盐([C4mim][PF6])、1-己基-3-甲基咪唑鎓六氟磷酸盐([C6mim][PF6])和 1-丁基-3-甲基咪唑鎓双三氟磷酸盐([C6mim][PF6])、和 1-丁基-3-甲基咪唑鎓双三氟甲基磺酰胺([C4mim][NTf2])作为共萃取剂,构建了一种液-液萃取系统,用于从水溶液中高效、选择性地萃取 Cs+。结果表明,DAB18C6-[C4mim][NTf2]混合溶剂系统在 DAB18C6 为 0.12 mol/L、ILs/CHCl3 的质量比为 1:4、O/A 的体积比为 1:1 的条件下,Cs+ 的萃取率高达 99.94 %,相对于 K+ (βCs/K = 1216.7) 和 Rb+ (βCs/Rb = 139.03) 等共存离子,对 Cs+ 的选择性更高。萃取系统对 Cs+ 的高选择性归因于 Cs+ 较低的水合结合能(-366.51 kJ/mol)和 DAB18C6 与 Cs+ 之间较强的相互作用(g(r) = 12.7)。此外,氨基冠醚与离子液体之间的氢键作用增加了萃取体系的粘度和表面张力,从而提高了体系的稳定性。值得注意的是,DAB18C6-Cs+-[NTF2]- 形成的最稳定结构归因于阳离子交换。总之,这项研究证明了从水溶液中高效分离和萃取铯的巨大潜力。
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引用次数: 0
Natural deep eutectic solvents: A paradigm of stability and permeability in the design of new ingredients 天然深共晶溶剂:新成分设计中的稳定性和渗透性范例
IF 5.3 2区 化学 Q2 CHEMISTRY, PHYSICAL Pub Date : 2024-08-30 DOI: 10.1016/j.molliq.2024.125864

Ascorbic Acid (AA) is a crucial component in the food industry, serving as both a quality and safety criterion. It is used to fortify foods due to its significant role in human health, acting as an antioxidant. Its benefits extend to both product quality and consumer health in the food and cosmetic industry. Due to their physicochemical properties, Natural Deep Eutectic Solvents (NADES) have the potential to be used for the extraction and stabilization of bioactive compounds. The objective of this study is to characterize various NADES, simulate the solubility of AA, evaluate the antioxidant and protective capacity of NADES, and investigate the permeability of this vitamin through the skin and gastrointestinal membrane. Antioxidant capacity was measured using three methods: TEAC, DPPH, and ORAC. The solubility of AA in NADES systems was simulated using the COSMOTherm software. The degradation of AA was monitored by HPLC/UV–Vis for 30 days at two different storage temperatures. Additionally, the membrane solubility was measured using the PAMPA method in both skin and gastrointestinal. The results indicate that organic acid-based NADES are more polar than sugar and polyalcohol-based NADES. The solubility prediction shows that reduced ln(γ) in Choline chloride-based NADES results in low AA solubility, which positively correlates with higher pH values. AA degradation increased at lower pH, and its half-life time was longer at 4 °C, being the best choline chloride (ChChl):xylose. Moreover, betaine:malic acid, ChChl:tartaric acid, and ChChl:lactic acid gave worse stabilizing results than control. According to the PAMPA study, AA in lactic acid:glucose had the highest Pe (permeability coefficient) for both gastrointestinal (Log Pe: −4.99) and skin (Log Pe: −4.78). Malic acid:glucose, on the other hand, had the lowest LogPe value (−6.9). In this study, some NADES can play a protective role in the preservation of ascorbic acid. This statement could be extended to other bioactive compounds found in NADES extracts that may be impacted by oxidative processes. Moreover, not all NADES stabilized equally AA. These findings could be applied to the formulation of ascorbic acid-containing drugs, cosmetics, and food products.

抗坏血酸(AA)是食品工业中的重要成分,既是质量标准,也是安全标准。由于抗坏血酸是一种抗氧化剂,对人体健康具有重要作用,因此被用于强化食品。在食品和化妆品行业中,它对产品质量和消费者健康都有好处。天然深共晶溶剂(NADES)因其物理化学特性,具有用于提取和稳定生物活性化合物的潜力。本研究的目的是描述各种 NADES 的特性,模拟 AA 的溶解度,评估 NADES 的抗氧化和保护能力,并研究这种维生素通过皮肤和胃肠道膜的渗透性。抗氧化能力采用三种方法进行测量:TEAC、DPPH 和 ORAC。使用 COSMOTherm 软件模拟了 AA 在 NADES 系统中的溶解度。在两种不同的储存温度下,通过 HPLC/UV-Vis 监测 AA 的降解情况,为期 30 天。此外,还使用 PAMPA 法测量了 AA 在皮肤和胃肠道中的膜溶解度。结果表明,有机酸类 NADES 的极性高于糖类和多元醇类 NADES。溶解度预测结果表明,氯化胆碱基 NADES 的 ln(γ)降低会导致 AA 溶解度降低,这与较高的 pH 值呈正相关。AA 的降解在较低的 pH 值下增加,其半衰期在 4 °C 下延长,氯化胆碱(ChChl):木糖的降解效果最好。此外,甜菜碱:苹果酸、氯化胆碱:酒石酸和氯化胆碱:乳酸的稳定效果比对照组差。根据 PAMPA 研究,乳酸:葡萄糖中的 AA 对胃肠道(Log Pe:-4.99)和皮肤(Log Pe:-4.78)的渗透系数(Pe)最高。另一方面,苹果酸:葡萄糖的 LogPe 值最低(-6.9)。在这项研究中,一些 NADES 对抗坏血酸的保存起到了保护作用。这种说法可以延伸到 NADES 提取物中发现的其他生物活性化合物,它们可能会受到氧化过程的影响。此外,并非所有的 NADES 都能稳定 AA。这些发现可应用于含抗坏血酸的药物、化妆品和食品的配制。
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引用次数: 0
S-scheme mechanism in the TiO2/Cu2O@Cu system toward selective degradation of an electron-rich dye pollutant under solar light 太阳光下 TiO2/Cu2O@Cu 系统选择性降解富电子染料污染物的 S 模式机制
IF 5.3 2区 化学 Q2 CHEMISTRY, PHYSICAL Pub Date : 2024-08-30 DOI: 10.1016/j.molliq.2024.125830

This research aims to reach a selective nanocomposite based on Cu and TiO2 nanoparticles (NPs) through a sol–gel followed by chemical reduction. Various methods such as XRD, SEM, TEM, HRTEM, BET, Raman, FTIR, DRS, XPS and PL analysis were used to characterize the prepared NPs. The reduced nature of Cu in nanocomposite was evidenced by its X-ray photoelectron spectral characteristics and its HRTEM image. Due to the presence of Cu NPs, light absorption in solar radiation by nanocomposite was considerably enhanced and caused more efficient charge carriers separation. A CCD was used to evaluate the photoactivity of the solar-driven photocatalyst by degrading methylene blue (MB) as a single model electron-rich organic pollutant. In optimal conditions, the highest photocatalytic activity reached 95.64 %. In this study, band structure and reactive species scavenging results confirmed an S-scheme mechanism for charge carrier transfer during photodegradation. The plasmonic S-scheme TiO2/Cu2O@Cu heterojunction photocatalyst exhibited remarkably strong photocatalytic selectivity toward MB in binary mixtures of MB with eosin B and rhodamine B. A preference for degradation of MB over safranin (Saf) is confirmed by the faster degradation rate of MB than that of Saf. S-scheme mechanism, Cu doping and dye sensitization all contributed to outstanding selective photodegradation performance.

本研究旨在通过溶胶凝胶法和化学还原法制备一种基于铜和二氧化钛纳米粒子(NPs)的选择性纳米复合材料。研究采用了 XRD、SEM、TEM、HRTEM、BET、拉曼、傅立叶变换红外光谱、DRS、XPS 和 PL 分析等多种方法对制备的 NPs 进行表征。纳米复合材料中铜的还原性可以从其 X 射线光电子能谱特征和 HRTEM 图像中得到证明。由于 Cu NPs 的存在,纳米复合材料对太阳辐射的光吸收大大增强,电荷载流子分离效率更高。通过降解亚甲基蓝(MB)这一单一富电子有机污染物模型,利用 CCD 评估了太阳能驱动光催化剂的光活性。在最佳条件下,最高光催化活性达到 95.64%。该研究的能带结构和反应物清除结果证实了光降解过程中电荷载流子转移的 S 型机制。在甲基溴与曙红 B 和罗丹明 B 的二元混合物中,质子 S 型 TiO2/Cu2O@Cu 异质结光催化剂对甲基溴表现出极强的光催化选择性。S 型机制、铜掺杂和染料敏化都有助于实现出色的选择性光降解性能。
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引用次数: 0
Effect of cationic surfactants on titration behavior of isotactic and atactic poly(methacrylic acid) 阳离子表面活性剂对等轴和非等轴聚甲基丙烯酸滴定行为的影响
IF 5.3 2区 化学 Q2 CHEMISTRY, PHYSICAL Pub Date : 2024-08-30 DOI: 10.1016/j.molliq.2024.125877

By forming strong complexes with oppositely charged polyelectrolytes, cationic surfactants significantly affect their solution properties. We investigated the effect of bound surfactant on the titration behavior of two isomer forms of poly(methacrylic acid), PMA, atactic and isotactic PMA, aPMA and iPMA, respectively, which are known for the cooperative change in chain conformation in water. The bound surfactant micelles increase the initial degree of ionization, α, of carboxyl groups on PMA, shift the conformational transition to higher α and make it narrower, and exclude the complexed chains from the solution. The titration curves were analyzed in the framework of the Henderson-Hasselbalch theory and the Gibbs free energy change of the conformational transition was calculated. The results were discussed in the context of a complex influence of surfactant on the PMA chain conformation in solution. It is proposed that the PMA-surfactant interaction changes from a so-called hydrophobic mode, which is responsible for the solubilization of the unionized and water-insoluble iPMA at low α, to a predominantly electrostatic one at high α, which leads to the precipitation of both aPMA and iPMA from solution. Constant pH simulations using simple coarse-grained models for the PMA polymers and individual surfactants were performed to rationalize the titration behavior of PMAs in the absence and presence of surfactant. By inducing an attractive interaction between PMA monomers, an excellent agreement between the experimental and numerical titration curves was obtained. Such agreement becomes poorer upon the addition of surfactant; however, the main features of the PMA titration curves are preserved, which supports the role of hydrophobic interactions in PMA-surfactant association at low pH values and that of electrostatics at higher pH.

阳离子表面活性剂通过与带相反电荷的聚电解质形成强络合物,可显著影响其溶液特性。我们研究了结合表面活性剂对聚甲基丙烯酸(PMA)两种异构体滴定行为的影响,这两种异构体分别是非接触性聚甲基丙烯酸(PMA)和异actic聚甲基丙烯酸(PMA),即 aPMA 和 iPMA。结合的表面活性剂胶束增加了 PMA 上羧基的初始电离度 α,使构象转变移向更高的α,并使其变窄,同时将络合链排除在溶液之外。在亨德森-哈塞尔巴赫理论框架下分析了滴定曲线,并计算了构象转变的吉布斯自由能变化。讨论结果的背景是表面活性剂对溶液中 PMA 链构象的复杂影响。有人提出,PMA 与表面活性剂之间的相互作用从所谓的疏水模式转变为静电模式,前者在低α 值时负责联合化和不溶于水的 iPMA 的溶解,后者在高α 值时导致 aPMA 和 iPMA 从溶液中沉淀。我们使用简单的粗粒度模型对 PMA 聚合物和单个表面活性剂进行了恒 pH 模拟,以合理解释 PMA 在无表面活性剂和有表面活性剂存在时的滴定行为。通过诱导 PMA 单体之间的吸引力相互作用,实验和数值滴定曲线之间获得了极好的一致性。然而,PMA 滴定曲线的主要特征得以保留,这证明在低 pH 值时,疏水相互作用在 PMA 与表面活性剂的结合中发挥作用,而在较高 pH 值时,静电作用发挥作用。
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引用次数: 0
Rheological and tribological properties of xanthan gum-fucoidan mixture: Effect of NaCl, KCl, and CaCl2 黄原胶-褐藻糖胶混合物的流变学和摩擦学特性:NaCl、KCl和CaCl2的影响
IF 5.3 2区 化学 Q2 CHEMISTRY, PHYSICAL Pub Date : 2024-08-30 DOI: 10.1016/j.molliq.2024.125879

This study endeavored to investigate the effects of salts (NaCl, KCl, and CaCl2) on the rheological and tribological properties of xanthan gum (XG)-fucoidan mixtures. With increasing salt concentrations, the intrinsic viscosity (56.1–30.9 dL/g) of mixtures decreased, with pronouncedly lower values (30.9–35.8 dL/g) observed with CaCl2 addition compared to monovalent salts addition (36.4–46.6 dL/g). This indicates a contraction of hydrodynamic size of the polymers due to the charge screening effect of cations and the formation of a more compact conformation in the presence of CaCl2 than with either NaCl or KCl addition. FTIR analysis revealed changes in the interaction between the two polymers in the presence of each salt. All samples exhibited shear-thinning behavior, and their thixotropic behavior increased as the salt concentration increased. The apparent viscosity and viscoelastic moduli decreased in the presence of monovalent salts but were increased in the presence of CaCl2. This was attributed to the crosslinking effect of Ca2+; Na+ and K+ did not induce crosslinking. In addition, the friction coefficient (μ) of mixtures containing salts reached the maximum at a lower entrainment speed (0.08–0.17 mm·s−1) than that without salt (1.54 mm·s−1), and the mixtures containing salts exhibited lower maximum μ values (0.28–0.62) compared to that without salt (0.83), indicating an improvement in the lubricant properties of XG-fucoidan mixtures. Our findings may help broaden the application of fucoidan in the food industry.

本研究旨在探讨盐类(氯化钠、氯化钾和氯化钙)对黄原胶(XG)-褐藻糖胶混合物流变学和摩擦学特性的影响。随着盐浓度的增加,混合物的固有粘度(56.1-30.9 dL/g)降低,与单价盐(36.4-46.6 dL/g)相比,加入 CaCl2 后的固有粘度值(30.9-35.8 dL/g)明显降低。这表明,由于阳离子的电荷屏蔽效应,聚合物的流体力学尺寸发生了收缩,与添加 NaCl 或 KCl 相比,在 CaCl2 的存在下形成了更紧凑的构象。傅立叶变换红外分析表明,在每种盐的存在下,两种聚合物之间的相互作用发生了变化。所有样品都表现出剪切稀化行为,其触变性能随着盐浓度的增加而增强。表观粘度和粘弹性模量在有单价盐存在时降低,但在有 CaCl2 存在时升高。这归因于 Ca2+ 的交联效应;Na+ 和 K+ 不会引起交联。此外,与不含盐的混合物(1.54 mm-s-1)相比,含盐混合物的摩擦系数(μ)在较低的夹带速度(0.08-0.17 mm-s-1)下达到最大值;与不含盐的混合物(0.83)相比,含盐混合物的最大μ值(0.28-0.62)较低,这表明褐藻糖胶混合物的润滑性能有所改善。我们的研究结果可能有助于扩大褐藻糖胶在食品工业中的应用。
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引用次数: 0
Exploring the role of aspartic acid in modulating micellization behavior of cationic cetyltrimethylammonium bromide 探索天冬氨酸在调节阳离子十六烷基三甲基溴化铵胶束化行为中的作用
IF 5.3 2区 化学 Q2 CHEMISTRY, PHYSICAL Pub Date : 2024-08-30 DOI: 10.1016/j.molliq.2024.125856

The study of the interaction between aspartic acid (Asp) and cetyltrimethylammonium bromide (CTAB) reveals important information about surfactant organization, surface tension, critical micelle concentration (CMC), and surface pressure. Because of enhanced surfactant solubility brought about by electrostatic interactions, Asp’s ionization lowers CTAB’s CMC. The maximal surface excess concentration falls with increasing Asp concentration, suggesting competition for surface adsorption. The minimum occupied area per surfactant molecule increases at the same time, indicating changed surfactant activity at the interface between air and water. Higher CTAB concentrations are associated with a decrease in surface tension, which suggests that when Asp concentration rises, micelle formation would be promoted. Saturation effects, on the other hand, happen at high Asp concentrations and interfere with micelle formation. These tendencies are supported by surface pressure measurements, highlighting the significance of ionic interactions in micelle behavior.

Moreover, surfactant structuring is impacted by the packing parameter decreasing as Asp concentration increases. The changing balance between hydrophilic and hydrophobic interactions within the CTAB/Asp micellar complexes is further explained by variations in degree of counterion dissociation of micelles (α) values. The complex dynamics of ionic interactions and their impact on surfactant behavior in CTAB/Asp systems are highlighted by these studies.

对天冬氨酸(Asp)和十六烷基三甲基溴化铵(CTAB)之间相互作用的研究揭示了有关表面活性剂组织、表面张力、临界胶束浓度(CMC)和表面压力的重要信息。由于静电作用提高了表面活性剂的溶解度,Asp 的电离降低了 CTAB 的 CMC。最大表面过量浓度随着 Asp 浓度的增加而下降,这表明表面吸附存在竞争。同时,每个表面活性剂分子的最小占据面积也在增加,这表明表面活性剂在空气和水界面上的活性发生了变化。CTAB 浓度越高,表面张力越小,这表明当 Asp 浓度升高时,胶束的形成会得到促进。另一方面,高浓度 Asp 会产生饱和效应,干扰胶束的形成。此外,表面活性剂的结构还受到堆积参数的影响,随着 Asp 浓度的增加,堆积参数也会降低。CTAB/Asp胶束复合物内部亲水和疏水相互作用平衡的变化可以通过胶束的反离子解离度(α)值的变化得到进一步解释。这些研究凸显了离子相互作用的复杂动态及其对 CTAB/Asp 系统中表面活性剂行为的影响。
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引用次数: 0
Spectroscopic and computational study of molecular interaction of Pexidartinib with homologous mammalian transport proteins 佩克沙替尼与哺乳动物同源转运蛋白分子相互作用的光谱和计算研究
IF 5.3 2区 化学 Q2 CHEMISTRY, PHYSICAL Pub Date : 2024-08-30 DOI: 10.1016/j.molliq.2024.125869

Binding of biologically important molecules with plasma proteins highly influence its availability, distribution, and metabolism, and thus has great significance in determining its therapeutic efficiency. Hence, studying its interaction with plasma proteins is prime and inevitable. Herein, we have investigated the molecular interaction of Pexidartinib, a novel, primitive and highly selective therapeutical agent against CSF-1R overexpression, with human serum albumin (HSA) and bovine serum albumin (BSA) using various spectroscopic methods, docking and simulations. The intrinsic fluorescence of the proteins considerably quenched on PEX addition accompanied by a slight blue shift. The complex formation between PEX and BSA/HSA induced some alterations in the molecular milieu of the tryptophan residues. The active binding locus was found to be within the hydrophobic cavity of Sudlow site I of both BSA and HSA. The binding dynamics suggest the interplay of hydrogen bonding and hydrophobic interactions in complex stabilisation. MD simulations provides valuable insights into the dynamic facets of the molecular recognition processes involved and governs the stability factor of protein post ligand complexation.

重要生物分子与血浆蛋白的结合对其可用性、分布和新陈代谢有很大影响,因此对决定其治疗效率具有重要意义。因此,研究其与血浆蛋白的相互作用是首要且不可避免的。在此,我们利用各种光谱方法、对接和模拟,研究了针对 CSF-1R 过度表达的新型、原始和高选择性治疗药物 Pexidartinib 与人血清白蛋白(HSA)和牛血清白蛋白(BSA)的分子相互作用。加入 PEX 后,蛋白质的本征荧光被大大淬灭,并伴有轻微的蓝移。PEX 与 BSA/HSA 形成的复合物诱导色氨酸残基的分子环境发生了一些变化。研究发现,活性结合位点位于 BSA 和 HSA 的 Sudlow 位点 I 的疏水空腔内。结合动力学表明,氢键和疏水相互作用在复合物稳定过程中相互作用。MD 模拟提供了有关分子识别过程动态方面的宝贵见解,并决定了配体结合后蛋白质的稳定因素。
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引用次数: 0
Solvation behavior of chitosan monomers in aqueous [Hmim]CL solutions. Experimental and DFT studies 壳聚糖单体在 [Hmim]CL 水溶液中的溶解行为。实验和 DFT 研究
IF 5.3 2区 化学 Q2 CHEMISTRY, PHYSICAL Pub Date : 2024-08-30 DOI: 10.1016/j.molliq.2024.125878

This paper reports densities and viscosities for the mixtures of D-glucosamine hydrochloride (GlcN·HCl) and N-acetyl-D-glucosamine (GlcNAc) with aqueous solutions of 1-hexyl-3-methylimidazolium chloride, [Hmim]Cl, between 293.15 and 318.15 K in 5 K increments and atmospheric pressure. Leveraging this data, we calculated volumetric properties such as apparent molar volume, Vϕ, limiting partial molar volume, Vϕ0, and standard molar volume of transfer, ΔVϕ0. We handled viscosity data to compute the viscosity B-coefficient and several activation parameters of viscous flow. Some of these are relevant in discussing interactions between monosaccharides (solute) and [Hmim]Cl (co-solvent) in aqueous media. The solute–solvent interactions were discussed based on ionic/ hydrophilic/ hydrophobic interactions using the co-sphere overlap model. ΔVϕ0 > 0 indicates that ionic/hydrophilic interactions predominate in the studied systems and are stronger in GlcN·HCl solutions than in GlcNAc at low [Hmim]Cl molalities. At higher [Hmim]Cl concentrations, decreasing values of ΔVϕ0 suggest the dominance of hydrophobic interactions over hydrophilic/ionic ones. We discuss (using Hepler’s constant and viscosity B-coefficient) the ability of monosaccharides to act as structure maker/breaker in aqueous [Hmim]Cl solutions. This indicates that GlcNAc is a better structure promoter than GlcN⋅HCl in aqueous [Hmim]Cl solutions. Finally, density functional theory (DFT) was used to model the molecular structure and compute the solute–solvent interaction energies using the GAMESS 2016 software.

本文报告了 D-氨基葡萄糖盐酸盐(GlcN-HCl)和 N-乙酰-D-氨基葡萄糖(GlcNAc)与 1-己基-3-甲基氯化咪唑([Hmim]Cl)水溶液的混合物在 293.15 至 318.15 K(以 5 K 为增量)和大气压力下的密度和粘度。利用这些数据,我们计算了表观摩尔体积(Vϕ)、极限部分摩尔体积(Vϕ0)和标准摩尔转移体积(ΔVϕ0)等体积特性。我们通过处理粘度数据来计算粘度 B 系数和几个粘流活化参数。其中一些参数与讨论单糖(溶质)和[Hmim]Cl(助溶剂)在水介质中的相互作用有关。根据离子/亲水/疏水相互作用,使用共球重叠模型讨论了溶质与溶剂之间的相互作用。ΔVj0 > 0 表明在所研究的体系中离子/亲水相互作用占主导地位,在低 [Hmim]Cl 摩尔数时,GlcN-HCl 溶液中的离子/亲水相互作用强于 GlcNAc 溶液。当 [Hmim]Cl 浓度较高时,ΔVϕ0 的值不断降低,这表明疏水相互作用在亲水/离子相互作用中占主导地位。我们(利用赫普勒常数和粘度 B 系数)讨论了单糖在[Hmim]Cl 水溶液中作为结构制造者/破坏者的能力。这表明,在[Hmim]Cl 水溶液中,GlcNAc 比 GlcN⋅HCl 更能促进结构的形成。最后,利用密度泛函理论(DFT)建立了分子结构模型,并使用 GAMESS 2016 软件计算了溶质-溶剂相互作用能。
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引用次数: 0
Synthesis, spectroscopic characterization, electronic elucidation, chemical reactivity, topological and molecular docking investigations of cefadroxil sulfoxide 头孢羟氨苄亚砜的合成、光谱表征、电子解析、化学反应、拓扑学和分子对接研究
IF 5.3 2区 化学 Q2 CHEMISTRY, PHYSICAL Pub Date : 2024-08-30 DOI: 10.1016/j.molliq.2024.125870

The cefadroxil sulfoxide (CDSO) para-hydroxy derivative, derived from cefadroxil, has enormous significance in pharmaceutical applications. The cefadroxil sulfoxide (CDSO) compound was synthesized and characterized by spectroscopic (FT-IR, FT-Raman, and UV–Visible) assessments. Computational investigations have been carried out concurrently with a B3LYP-6-311++G(d,p) basis set and density functional theory (DFT). The molecular vibrational assignments, chemical reactivity, electronic properties, and optical activities are calculated using gas and different solvent phases. The stable ground state configuration of the given molecular compound is investigated using PES analysis. Furthermore, the chemical behavior of the CDSO was thoroughly investigated for different solvent aspects through HOMO-LUMO, MEP, UV–Visible and electron-hole excitation analyses. The molecular occupancy, virtual occupancy, and overlapping bonding energies are investigated by TDOS, PDOS, and COOP spectrum studies. Fukui function and dual descriptor investigations extend to the chemical reactivity of individual atomic sites. The intra-molecular analysis provided a deeper understanding of the molecular interactions performed by natural bond orbitals (NBO) and non-linear optics (NLO), which provided optical activity for the title compound. Additionally, electron localization function (ELF), localized orbital locator (LOL), and reduced density gradient (RDG) analyses were also accomplished to provide insight into the delocalized orbitals in the header composite. The molecular docking was achieved, and the ligand with 4EVM protein is providing the potential antimicrobial biological activity (binding energy −7.12 kcal/mol) of the CDSO compound.

头孢羟氨苄亚砜(CDSO)是从头孢羟氨苄中提取的对羟基衍生物,在医药应用中具有重要意义。我们合成了头孢羟氨苄亚砜(CDSO)化合物,并通过光谱(傅立叶变换红外光谱、傅立叶变换拉曼光谱和紫外可见光谱)评估对其进行了表征。计算研究采用 B3LYP-6-311++G(d,p) 基础集和密度泛函理论(DFT)同时进行。利用气相和不同溶剂相计算了分子振动赋值、化学反应性、电子特性和光学活性。利用 PES 分析研究了给定分子化合物的稳定基态构型。此外,还通过 HOMO-LUMO、MEP、紫外-可见光和电子-空穴激发分析,深入研究了 CDSO 在不同溶剂条件下的化学行为。通过 TDOS、PDOS 和 COOP 光谱研究调查了分子占有率、虚拟占有率和重叠键能。福井函数和双重描述符研究扩展到单个原子位点的化学反应性。分子内分析加深了对自然键轨道(NBO)和非线性光学(NLO)所产生的分子相互作用的理解,从而为标题化合物提供了光学活性。此外,还进行了电子定位功能(ELF)、局部轨道定位器(LOL)和密度梯度降低(RDG)分析,以深入了解标题化合物中的非定位轨道。分子对接已经完成,配体与 4EVM 蛋白的结合提供了 CDSO 化合物潜在的抗菌生物活性(结合能 -7.12 kcal/mol)。
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引用次数: 0
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Journal of Molecular Liquids
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