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Increased expression of BRD4 isoforms long (BRD4-L) and short (BRD4-S) promotes chemotherapy resistance in high-grade serous ovarian carcinoma. BRD4长型(BRD4-L)和短型(BRD4-S)亚型表达的增加促进了高级别浆液性卵巢癌的化疗耐药性。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-09-12 eCollection Date: 2023-01-01 DOI: 10.18632/genesandcancer.233
Ana Luiza Drumond-Bock, Luyao Wang, Lin Wang, Magdalena Cybula, Maria Rostworowska, Michael Kinter, Magdalena Bieniasz

Chemoresistance in ovarian carcinoma is a puzzling issue that urges understanding of strategies used by cancer cells to survive DNA damage and to escape cell death. Expanding efforts to understand mechanisms driving chemoresistance and to develop alternative therapies targeting chemoresistant tumors are critical. Amplification of BRD4 is frequently associated with chemoresistant ovarian carcinoma, but little is known about the biological effects of the overexpression of BRD4 isoforms in this malignancy. Here, we described the consequences of BRD4-L and BRD4-S overexpression in ovarian carcinoma shedding a light on a complex regulation of BRD4 isoforms. We demonstrated that the BRD4-L transcript expression is required to generate both isoforms, BRD4-L and BRD4-S. We showed that the BRD4-S mRNA expression positively correlated with BRD4-S protein levels, while BRD4-L isoform showed negative correlation between mRNA and protein levels. Moreover, we demonstrated that an overexpression of BRD4 isoforms is associated with chemoresistance in ovarian cancer.

卵巢癌的化疗耐药性是一个令人困惑的问题,它促使人们理解癌症细胞在DNA损伤中生存和逃避细胞死亡的策略。扩大努力以了解化学耐药性的驱动机制并开发针对化学耐药性肿瘤的替代疗法至关重要。BRD4的扩增通常与化疗耐药卵巢癌有关,但对BRD4亚型过表达在这种恶性肿瘤中的生物学作用知之甚少。在此,我们描述了卵巢癌中BRD4-L和BRD4-S过表达的后果,揭示了BRD4亚型的复杂调控。我们证明了BRD4-L转录物的表达是产生BRD4-L和BRD4-S这两种亚型所必需的。我们发现BRD4-S mRNA表达与BRD4-S蛋白水平呈正相关,而BRD4-L亚型在mRNA和蛋白水平之间呈负相关。此外,我们证明了BRD4亚型的过度表达与卵巢癌症的化疗耐药性有关。
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引用次数: 0
VCP/p97, a pleiotropic protein regulator of the DNA damage response and proteostasis, is a potential therapeutic target in KRAS-mutant pancreatic cancer. VCP/p97是一种DNA损伤反应和蛋白质稳态的多效性蛋白调节剂,是kras突变型胰腺癌的潜在治疗靶点。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-03-10 eCollection Date: 2023-01-01 DOI: 10.18632/genesandcancer.231
Ye S Lee, Jennifer E Klomp, Clint A Stalnecker, Craig M Goodwin, Yanzhe Gao, Gaith N Droby, Cyrus Vaziri, Kirsten L Bryant, Channing J Der, Adrienne D Cox

We and others have recently shown that proteins involved in the DNA damage response (DDR) are critical for KRAS-mutant pancreatic ductal adenocarcinoma (PDAC) cell growth in vitro. However, the CRISPR-Cas9 library that enabled us to identify these key proteins had limited representation of DDR-related genes. To further investigate the DDR in this context, we performed a comprehensive, DDR-focused CRISPR-Cas9 loss-of-function screen. This screen identified valosin-containing protein (VCP) as an essential gene in KRAS-mutant PDAC cell lines. We observed that genetic and pharmacologic inhibition of VCP limited cell growth and induced apoptotic death. Addressing the basis for VCP-dependent growth, we first evaluated the contribution of VCP to the DDR and found that loss of VCP resulted in accumulation of DNA double-strand breaks. We next addressed its role in proteostasis and found that loss of VCP caused accumulation of polyubiquitinated proteins. We also found that loss of VCP increased autophagy. Therefore, we reasoned that inhibiting both VCP and autophagy could be an effective combination. Accordingly, we found that VCP inhibition synergized with the autophagy inhibitor chloroquine. We conclude that concurrent targeting of autophagy can enhance the efficacy of VCP inhibitors in KRAS-mutant PDAC.

我们和其他人最近表明,参与DNA损伤反应(DDR)的蛋白质对kras突变型胰腺导管腺癌(PDAC)细胞的体外生长至关重要。然而,使我们能够识别这些关键蛋白的CRISPR-Cas9文库对ddr相关基因的表达有限。为了在这种情况下进一步研究DDR,我们进行了一项全面的、以DDR为重点的CRISPR-Cas9功能丧失筛查。该筛选鉴定了含valosin-containing protein (VCP)是kras突变型PDAC细胞系的必需基因。我们观察到VCP的遗传和药理学抑制作用限制了细胞生长并诱导凋亡。针对VCP依赖性生长的基础,我们首先评估了VCP对DDR的贡献,并发现VCP的缺失导致DNA双链断裂的积累。接下来,我们研究了VCP在蛋白质停滞中的作用,并发现VCP的丧失导致了多泛素化蛋白的积累。我们还发现VCP的丧失增加了自噬。因此,我们认为抑制VCP和自噬可能是有效的组合。因此,我们发现VCP抑制与自噬抑制剂氯喹具有协同作用。我们得出结论,同时靶向自噬可以增强VCP抑制剂在kras突变型PDAC中的疗效。
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引用次数: 0
Leveraging a powerful allogeneic dendritic cell line towards neoantigen-based cancer vaccines. 利用强大的异体树突状细胞系开发基于新抗原的癌症疫苗。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.18632/genesandcancer.229
Dalil Hannani, Estelle Leplus, Karine Laulagnier, Laurence Chaperot, Joël Plumas

In recent years, immunotherapy has finally found its place in the anti-cancer therapeutic arsenal, even becoming standard of care as first line treatment for metastatic forms. The clinical benefit provided by checkpoint blockers such as anti-PD-1/PD-L1 in many cancers revolutionized the field. However, too many patients remain refractory to these treatments due to weak baseline anti-cancer immunity. There is therefore a need to boost the frequency and function of patients' cytotoxic CD8+ cellular effectors by targeting immunogenic and tumor-restricted antigens, such as neoantigens using an efficient vaccination platform. Dendritic cells (DC) are the most powerful immune cell subset for triggering cellular immune response. However, autologous DC-based vaccines display several limitations, such as the lack of reproducibility and the limited number of cells that can be manufactured. Here we discuss the advantages of a new therapeutic vaccine based on an allogeneic Plasmacytoid DC cell line, which is easy to produce and represents a powerful platform for priming and expanding anti-neoantigen cytotoxic CD8+ T-cells.

近年来,免疫疗法终于在抗癌治疗武器库中找到了自己的位置,甚至成为转移性肿瘤的一线治疗标准。检查点阻断剂如抗pd -1/PD-L1在许多癌症中提供的临床益处彻底改变了该领域。然而,由于基线抗癌免疫能力较弱,许多患者对这些治疗仍然难以治愈。因此,需要使用有效的疫苗接种平台,通过靶向免疫原性和肿瘤限制性抗原(如新抗原)来提高患者细胞毒性CD8+细胞效应物的频率和功能。树突状细胞(DC)是触发细胞免疫反应的最强大的免疫细胞亚群。然而,基于dc的自体疫苗显示出一些局限性,例如缺乏可重复性和可制造的细胞数量有限。本文讨论了基于同种异体浆细胞样DC细胞系的新型治疗性疫苗的优势,该疫苗易于生产,并且代表了启动和扩增抗新抗原细胞毒性CD8+ t细胞的强大平台。
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引用次数: 1
Severe herpesvirus infection beats adult T-cell leukemia/lymphoma. 严重的疱疹病毒感染击败成人t细胞白血病/淋巴瘤。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.18632/genesandcancer.228
Tatsuro Jo
the confirmation of the
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引用次数: 0
CEACAMS 1, 5, and 6 in disease and cancer: interactions with pathogens. 疾病和癌症中的CEACAMS 1、5和6:与病原体的相互作用。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.18632/genesandcancer.230
Jerin Thomas, Addison Klebanov, Sahara John, Larry S Miller, Anil Vegesna, Richard L Amdur, Krishanu Bhowmick, Lopa Mishra

The CEA family comprises 18 genes and 11 pseudogenes located at chromosome 19q13.2 and is divided into two main groups: cell surface anchored CEA-related cell adhesion molecules (CEACAMs) and the secreted pregnancy-specific glycoproteins (PSGs). CEACAMs are highly glycosylated cell surface anchored, intracellular, and intercellular signaling molecules with diverse functions, from cell differentiation and transformation to modulating immune responses associated with infection, inflammation, and cancer. In this review, we explore current knowledge surrounding CEACAM1, CEACAM5, and CEACAM6, highlight their pathological significance in the areas of cancer biology, immunology, and inflammatory disease, and describe the utility of murine models in exploring questions related to these proteins.

CEA家族包括18个基因和11个假基因,位于染色体19q13.2上,分为两大类:细胞表面锚定CEA相关细胞粘附分子(CEACAMs)和分泌妊娠特异性糖蛋白(psg)。ceacam是高度糖基化的细胞表面锚定、细胞内和细胞间信号分子,具有多种功能,从细胞分化和转化到调节与感染、炎症和癌症相关的免疫反应。在这篇综述中,我们探索了目前关于CEACAM1、CEACAM5和CEACAM6的知识,强调了它们在癌症生物学、免疫学和炎症疾病领域的病理意义,并描述了小鼠模型在探索这些蛋白质相关问题中的效用。
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引用次数: 1
A novel t (5; 17) (q35; q21) associated with t (8; 21) (q22; q22) in a patient with acute myeloid leukemia: case report and review of literature. 小说(5;17) (q35;Q21)与t (8;21)(如;Q22)急性髓性白血病1例:病例报告及文献复习。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-01-01 DOI: 10.18632/genesandcancer.232
Kmira Zahra, Wided Cherif, Gereisha Ahmed, Haifa Regaieg, Ben Sayed Nesrine, Monia Zaier, Wided Mootamri, Yosra Ben Youssef, Nejia Brahem, Halima Sennana, Abderrahim Khelif

The t (8; 21) (q22; q22) with the resulting RUNX1- RUNX1T1 rearrangement is one of the most common cytogenetic abnormalities in acute myeloid leukemia (AML). It is associated with favorable prognosis. The t (5; 17) (q35; q21) is an uncommon translocation, fuses the gene for the nucleophosmin (NPM) to the retinoic acid receptor α(RARA) and was described essentially in acute promyelocytic leukemia (APL) variant. We present the case of a 19-year-old male patient who developed an AML with t (8; 21) (q22; q22) associated to t (5; 17) (q35; 21). Morphology and immunophenotype of the leukemic cells were compatible with AML. The patient received chemotherapy based on cytarabine and anthracycline without all-trans retinoic acid (ATRA) followed by allogenic stem cell transplantation in first remission. To the best of our knowledge, this is the first report of an association between a rare translocation t (5; 17) and t (8; 21) in AML. In this report, we will discuss the prognosis of this association as well as the treatment.

t (8;21)(如;q22)导致RUNX1- RUNX1T1重排是急性髓性白血病(AML)中最常见的细胞遗传学异常之一。它与良好的预后有关。t (5;17) (q35;q21)是一种罕见的易位,将核磷蛋白(NPM)基因融合到视黄酸受体α(RARA)上,主要发生在急性早幼粒细胞白血病(APL)变体中。我们提出一个19岁的男性患者谁发展AML与t (8;21)(如;Q22)与t (5;17) (q35;21)。白血病细胞的形态和免疫表型与AML一致。患者在首次缓解时接受基于阿糖胞苷和蒽环类药物的化疗,不使用全反式维甲酸(ATRA),随后进行同种异体干细胞移植。据我们所知,这是首次报道罕见的易位t (5;17)和t (8);21) AML。在这篇报道中,我们将讨论这种关联的预后以及治疗。
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引用次数: 0
Slit2 signaling stimulates Ewing sarcoma growth. Slit2信号刺激尤文氏肉瘤生长。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-12-14 eCollection Date: 2022-01-01 DOI: 10.18632/genesandcancer.227
Kruthi Suvarna, Panneerselvam Jayabal, Xiuye Ma, Yuzuru Shiio

Ewing sarcoma is a cancer of bone and soft tissue in children driven by EWS::ETS fusion, most commonly EWS::FLI1. Because current cytotoxic chemotherapies are not improving the survival of those with metastatic or recurrent Ewing sarcoma cases, there is a need for novel and more effective targeted therapies. While EWS::FLI1 is the major driver of Ewing sarcoma, EWS::FLI1 has been difficult to target. A promising alternative approach is to identify and target the molecular vulnerabilities created by EWS::FLI1. Here we report that EWS::FLI1 induces the expression of Slit2, the ligand of Roundabout (Robo) receptors implicated in axon guidance and multiple other developmental processes. EWS::FLI1 binds to the Slit2 gene promoter and stimulates the expression of Slit2. Slit2 inactivates cdc42 and stabilizes the BAF chromatin remodeling complexes, enhancing EWS::FLI1 transcriptional output. Silencing of Slit2 strongly inhibited anchorage-dependent and anchorage-independent growth of Ewing sarcoma cells. Silencing of Slit2 receptors, Robo1 and Robo2, inhibited Ewing sarcoma growth as well. These results uncover a new role for Slit2 signaling in stimulating Ewing sarcoma growth and suggest that this pathway can be targeted therapeutically.

Ewing肉瘤是由EWS::ETS融合引起的儿童骨和软组织癌,最常见的是EWS::FLI1。由于目前的细胞毒性化疗不能提高转移性或复发性尤文氏肉瘤患者的生存率,因此需要新的更有效的靶向治疗。虽然EWS::FLI1是Ewing肉瘤的主要驱动因子,但EWS::FLI1一直难以靶向。一种有希望的替代方法是识别和靶向EWS::FLI1产生的分子脆弱性。在这里,我们报道了EWS::FLI1诱导Slit2的表达,Slit2是参与轴突引导和多种其他发育过程的Roundabout (Robo)受体的配体。EWS::FLI1结合Slit2基因启动子,刺激Slit2的表达。Slit2失活cdc42并稳定BAF染色质重塑复合物,增强EWS::FLI1转录输出。沉默Slit2强烈抑制锚定依赖性和非锚定依赖性Ewing肉瘤细胞的生长。沉默Slit2受体Robo1和Robo2也能抑制Ewing肉瘤的生长。这些结果揭示了Slit2信号在刺激Ewing肉瘤生长中的新作用,并表明该途径可以靶向治疗。
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引用次数: 0
Systems biology network reveals the correlation between COX-2 expression and Ch 7q copy number alterations in Ch 11q-deleted pediatric neuroblastoma tumors. 系统生物学网络揭示了ch11q缺失儿童神经母细胞瘤肿瘤中COX-2表达与ch7q拷贝数改变之间的相关性。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-12-02 eCollection Date: 2022-01-01 DOI: 10.18632/genesandcancer.225
Thatyanne Gradowski Farias da Costa do Nascimento, Mateus Eduardo de Oliveira Thomazini, Nilton de França Junior, Lisiane de Castro Poncio, Aline Simoneti Fonseca, Bonald Cavalcante de Figueiredo, Saulo Henrique Weber, Roberto Hirochi Herai, Lucia de Noronha, Luciane R Cavalli, Bruno César Feltes, Selene Elifio-Esposito

Tumor-associated inflammation and chromosomal aberrations can play crucial roles in cancer development and progression. In neuroblastoma (NB), the enzyme cyclooxygenase-2 (COX-2) is associated with copy number alterations on the long arm of chromosome 11 (Ch 11q), defining an aggressive disease subset. This retrospective study included formalin-fixed paraffin-embedded tumor samples collected from nine patients during diagnosis at the pediatric Pequeno Principe Hospital, Curitiba, PR, Brazil, and post-chemotherapy (CT). COX-2 expression was evaluated using immunohistochemistry and correlated with the genome profile of paired pre- and post-CT samples, determined by array comparative genomic hybridization. A systems biology approach elucidated the PTGS2 network interaction. The results showed positive correlations between pre-CT Ch 7q gain and COX-2 expression (ρ = 0.825; p-value = 0.006) and negative correlations between Ch 7q gain and Ch 11q deletion (ρ = -0.919; p-value = 0.0005). Three samples showed Ch 11q deletion and Ch 7q gain. Network analysis identified a direct connection between CAV-1 (Ch 7q) and COX-2 in NB tumors and highlighted the connection between amplified genes in Ch 7q and deleted ones in 11q. The identification of hub-bottleneck-switch genes provides new biological insights into this connection between NB, tumorigenesis, and inflammation.

肿瘤相关的炎症和染色体畸变在癌症的发生和发展中起着至关重要的作用。在神经母细胞瘤(NB)中,环氧化酶-2 (COX-2)与11号染色体长臂(ch11q)上的拷贝数改变相关,定义了一种侵袭性疾病亚群。本回顾性研究包括在巴西库里提巴Pequeno Principe儿科医院诊断期间和化疗后(CT)收集的9例患者的福尔马林固定石蜡包埋肿瘤样本。使用免疫组织化学评估COX-2的表达,并通过阵列比较基因组杂交确定配对ct前和ct后样本的基因组图谱。系统生物学方法阐明了PTGS2网络的相互作用。结果显示,ct前ch7q增益与COX-2表达呈正相关(ρ = 0.825;p值= 0.006),ch7q增益与ch11q缺失呈负相关(ρ = -0.919;p值= 0.0005)。三个样品显示ch11q缺失和ch7q增加。网络分析发现在NB肿瘤中CAV-1 (Ch 7q)和COX-2之间存在直接联系,并强调了Ch 7q中扩增的基因和11q中缺失的基因之间的联系。中枢瓶颈开关基因的鉴定为NB、肿瘤发生和炎症之间的联系提供了新的生物学见解。
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引用次数: 0
Ectopic expression of lncRNA MVIH as a potential diagnostic biomarker in cervical cancer. lncRNA MVIH异位表达作为宫颈癌潜在的诊断生物标志物。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-11-23 eCollection Date: 2022-01-01 DOI: 10.18632/genesandcancer.224
Mohammad Ghanbari, Aida Aghazadeh, Elaheh Malekabbaslou, Ali Rajabi, Aref Sobhkhizy, Melika Maydanchi, Ali Saber, Reza Safaralizadeh

Aim: Cervical cancer (CC) is one of the most common cancers in women. Recent advances in screening and vaccination against the papilloma virus (HPV) have increased protection against CC. However, there is no effective diagnostic biomarker and treatment approach during the course of the disease. The current study is thus aimed to evaluate the changes in the expression of lncRNA associated with microvascular invasion in hepatocellular carcinoma (lncRNA MVIH) and its diagnostic value as a biomarker in CC patients.

Materials and methods: One-hundred and fifteen (n = 115) pairs of CC primary tumor and marginal non-tumor tissue samples were obtained from Tabriz Valiasr International Hospital (Tabriz, Iran). RNA extraction and cDNA synthesis followed by quantitative reverse transcriptase PCR (qRT-PCR) were considered to investigate alterations in the expression levels of MVIH in patients with CC. The associations between MVIH expression changes and clinicopathological features as well as its potential as a diagnostic biomarker were assessed using SPSS and GraphPad prism software and the receiver operating characteristic (ROC).

Results: The expression levels of MVIH were significantly higher in CC tumors as compared to marginal non-tumor samples (p < 0.0001). Overexpression of MVIH was significantly associated with younger age (p = 0.033), lymph node metastasis (p = 0.031), tumor invasion depth (p = 0.035), and squamous cell type of CC (p = 0.019). The ROC analysis for MVIH as a diagnostic biomarker revealed the respective sensitivity and specificity of 67.83 and 80.

Conclusions: Overexpression of MVIH in CC tumors suggests its oncogenic role during tumorigenesis. Thus, it may serve as a potential diagnostic biomarker.

目的:宫颈癌(CC)是女性最常见的癌症之一。最近在筛查和接种乳头状瘤病毒(HPV)疫苗方面的进展增加了对CC的保护,然而,在疾病过程中没有有效的诊断生物标志物和治疗方法。因此,本研究旨在评估与肝细胞癌微血管侵袭相关的lncRNA表达变化(lncRNA MVIH)及其作为CC患者生物标志物的诊断价值。材料和方法:115对CC原发肿瘤和边缘非肿瘤组织样本来自伊朗大不里士Valiasr国际医院(Tabriz, Iran)。采用RNA提取、cDNA合成和定量逆转录酶PCR (qRT-PCR)研究MVIH在CC患者中的表达变化,并利用SPSS、GraphPad prism软件和受试者工作特征(ROC)评估MVIH表达变化与临床病理特征的关系及其作为诊断性生物标志物的潜力。结果:MVIH在CC肿瘤中的表达水平明显高于边缘非肿瘤样本(p < 0.0001)。MVIH过表达与年龄小(p = 0.033)、淋巴结转移(p = 0.031)、肿瘤浸润深度(p = 0.035)、CC鳞状细胞类型(p = 0.019)相关。ROC分析显示MVIH作为诊断性生物标志物的敏感性和特异性分别为67.83和80。结论:MVIH在CC肿瘤中的过表达提示其在肿瘤发生过程中起致瘤作用。因此,它可能作为一种潜在的诊断性生物标志物。
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引用次数: 1
Reaching beyond family history as inclusion criteria for pancreatic cancer surveillance in high-risk populations. 超越家族史作为高危人群胰腺癌监测的纳入标准。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-08-29 eCollection Date: 2022-01-01 DOI: 10.18632/genesandcancer.223
Louise Wang, Susan M Domchek, Michael L Kochman, Bryson W Katona
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引用次数: 0
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