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METCAM/MUC18: A Novel Tumor Suppressor for Some Cancers METCAM/MUC18:一种新的肿瘤抑制因子
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-05-18 DOI: 10.5772/intechopen.86271
Guang-Jer Wu
METCAM/MUC18, a component of cellular membrane, is a cell adhesion molecule (CAM) in the Ig-like gene super-family. It is capable of carrying out general functions of CAMs, such as performing intercellular interactions and interaction of cell with extracellular matrix in tumor microenvironment, interacting with various signaling pathways, and regulating social behaviors of cells. METCAM/MUC18 plays the tumor suppressor function in some cancers, such as colorectal cancer, nasopharyngeal carcinoma type I, one mouse melanoma subline K1735-9, ovarian cancer, pancreatic cancer, prostate cancer PC-3 cell line, and perhaps hemangioma. Possible mechanism in the METCAM/MUC18-mediated tumor suppression is pro-posed. By taking advantage of the tumor suppressor function of METCAM/MUC18, recombinant METCAM/MUC18 proteins and other derived products may be used as therapeutic agents to treat these cancers.
METCAM/MUC18是igg样基因超家族中的一种细胞粘附分子(CAM),是细胞膜的组成部分。它能够完成cam的一般功能,如在肿瘤微环境中进行细胞间相互作用和细胞与细胞外基质的相互作用,与各种信号通路相互作用,调节细胞的社会行为。METCAM/MUC18在某些癌症中发挥抑瘤功能,如结直肠癌、鼻咽癌I型、一种小鼠黑色素瘤亚群K1735-9、卵巢癌、胰腺癌、前列腺癌PC-3细胞系,可能还有血管瘤。提出了METCAM/ muc18介导的肿瘤抑制的可能机制。利用METCAM/MUC18的抑瘤功能,重组METCAM/MUC18蛋白及其衍生产物可作为治疗这些癌症的药物。
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引用次数: 1
Amphiphilic polyanhydride-based recombinant MUC4β-nanovaccine activates dendritic cells. 基于两亲性多酸酐的重组muc4 β纳米疫苗激活树突状细胞。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-05-01 DOI: 10.18632/genesandcancer.189
Kasturi Banerjee, Shailendra K Gautam, Prakash Kshirsagar, Kathleen A Ross, Gaelle Spagnol, Paul Sorgen, Michael J Wannemuehler, Balaji Narasimhan, Joyce C Solheim, Sushil Kumar, Surinder K Batra, Maneesh Jain

Mucin 4 (MUC4) is a high molecular weight glycoprotein that is differentially overexpressed in pancreatic cancer (PC), functionally contributes to disease progression, and correlates with poor survival. Further, due to its aberrant glycosylation and extensive splicing, MUC4 is a potential target for cancer immunotherapy. Our previous studies have demonstrated the utility of amphiphilic polyanhydride nanoparticles as a useful platform for the development of protein-based prophylactic and therapeutic vaccines. In the present study, we encapsulated purified recombinant human MUC4-beta (MUC4β) protein in polyanhydride (20:80 CPTEG:CPH) nanoparticles (MUC4β-nanovaccine) and evaluated its ability to activate dendritic cells and induce adaptive immunity. Immature dendritic cells when pulsed with MUC4β-nanovaccine exhibited significant increase in the surface expressions of MHC I and MHC II and costimulatory molecules (CD80 and CD86), as well as, secretion of pro-inflammatory cytokines (IFN-γ, IL-6, and IL-12) as compared to cells exposed to MUC4β alone or MUC4β mixed with blank nanoparticles (MUC4β+NP). Following immunization, as compared to the other formulations, MUC4β-nanovaccine elicited higher IgG2b to IgG1 ratio of anti-MUC4β-antibodies suggesting a predominantly Th1-like class switching. Thus, our findings demonstrate MUC4β-nanovaccine as a novel platform for PC immunotherapy.

Mucin 4 (MUC4)是一种高分子量糖蛋白,在胰腺癌(PC)中差异过表达,在功能上促进疾病进展,并与低生存率相关。此外,由于其异常的糖基化和广泛的剪接,MUC4是癌症免疫治疗的潜在靶点。我们之前的研究已经证明了两亲性聚酸酐纳米颗粒作为开发基于蛋白质的预防性和治疗性疫苗的有用平台的效用。在本研究中,我们将纯化的重组人MUC4β (MUC4β)蛋白包封在聚酸酐(20:80 CPTEG:CPH)纳米颗粒(MUC4β-纳米疫苗)中,并评估其激活树突状细胞和诱导适应性免疫的能力。与单独暴露于MUC4β或MUC4β与空白纳米颗粒(MUC4β+NP)混合的细胞相比,未成熟的树突状细胞在MUC4β-纳米疫苗脉冲时表现出MHC I和MHC II和共刺激分子(CD80和CD86)的表面表达显著增加,以及促炎细胞因子(IFN-γ, IL-6和IL-12)的分泌显著增加。免疫后,与其他制剂相比,muc4 β-纳米疫苗引发更高的抗muc4 β-抗体IgG2b和IgG1比例,表明主要是th1样的类转换。因此,我们的研究结果证明muc4 β-纳米疫苗是一种新的PC免疫治疗平台。
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引用次数: 23
Osteosarcoma progression is associated with increased nuclear levels and transcriptional activity of activated β-Catenin. 骨肉瘤的进展与核水平和活化β-连环蛋白转录活性的增加有关。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-05-01 DOI: 10.18632/genesandcancer.191
Noureen Ali, Geetha Venkateswaran, Elizabeth Garcia, Takaaki Landry, Hunter McColl, Consolato Sergi, Amit Persad, Yasser Abuetabh, David D Eisenstat, Sujata Persad

Osteosarcoma (OS) is an aggressive primary bone malignancy that has peak incidence in children and young adults <25 years of age. Despite current multimodal treatments, no significant change in patient outcome has been observed in two decades. Presently, there is a lack of established, reliable baseline prognostic markers for aggressive OS, other than extent and site of disease involvement. The canonical Wnt/β-catenin pathway controls multiple cellular processes, and is known to be a critical pathway in OS progression. This pathway regulates cellular levels of β-catenin, which is a significant player in the oncogenesis and progression of many cancers. We investigated the relationship between β-catenin, more specifically, the transcriptionally active form of β-catenin, Activated β-Catenin (ABC), and OS progression. Using an in vitro model, we observed that cellular/nuclear ABC levels, but not cellular/nuclear β-catenin levels, increase with the degree of aggressiveness in OS. Our results demonstrate a strong association between nuclear-ABC levels and aggressive OS in vitro. Furthermore, we observed significant correlation between positive nuclear-ABC and patient age and tumor stage. Our results support the potential use of ABC as a predictive marker for risk stratification in OS.

骨肉瘤(Osteosarcoma, OS)是一种侵袭性的原发性骨恶性肿瘤,在体外模型中发病率最高的是儿童和年轻人。我们观察到细胞/核ABC水平随着骨肉瘤侵袭程度的增加而增加,而不是细胞/核β-catenin水平。我们的研究结果表明核abc水平与体外侵袭性OS之间存在很强的关联。此外,我们观察到核abc阳性与患者年龄和肿瘤分期有显著相关性。我们的结果支持ABC作为OS风险分层的预测标记物的潜在用途。
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引用次数: 9
Dissecting the expression landscape of cytochromes P450 in hepatocellular carcinoma: towards novel molecular biomarkers. 细胞色素P450在肝细胞癌中的表达:寻找新的分子生物标志物。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-05-01 DOI: 10.18632/genesandcancer.190
Camille Martenon Brodeur, Philippe Thibault, Mathieu Durand, Jean-Pierre Perreault, Martin Bisaillon

Hepatocellular carcinoma (HCC) is the second leading cause of cancer-related deaths around the world. Recent advances in genomic technologies have allowed the identification of various molecular signatures in HCC tissues. For instance, differential gene expression levels of various cytochrome P450 genes (CYP450) have been reported in studies performed on limited numbers of HCC tissue samples, or focused on a small subset on CYP450s. In the present study, we monitored the expression landscape of all the members of the CYP450 family (57 genes) in more than 200 HCC tissues using RNA-Seq data from The Cancer Genome Atlas. Using stringent statistical filters and data from paired tissues, we identified significantly dysregulated CYP450 genes in HCC. Moreover, the expression level of selected CYP450s was validated by qPCR on cDNA samples from an independent cohort. Threshold values (sensitivity and specificity) based on dysregulated gene expression were also determined to allow for confident identification of HCC tissues. Finally, a global look at expression levels of the 57 members of the CYP450 family across ten different cancer types revealed specific expression signatures. Overall, this study provides useful information on the transcriptomic landscape of CYP450 genes in HCC and on new potential HCC biomarkers.

肝细胞癌(HCC)是全球癌症相关死亡的第二大原因。基因组技术的最新进展使得肝癌组织中各种分子特征的鉴定成为可能。例如,各种细胞色素P450基因(CYP450)的差异基因表达水平已经在有限数量的HCC组织样本中进行的研究中被报道,或者集中在CYP450的一小部分。在本研究中,我们使用来自癌症基因组图谱的RNA-Seq数据监测了200多个HCC组织中CYP450家族所有成员(57个基因)的表达情况。通过严格的统计过滤和配对组织的数据,我们发现HCC中CYP450基因明显失调。此外,在独立队列的cDNA样本上,通过qPCR验证了所选cyp450的表达水平。还确定了基于基因表达失调的阈值(敏感性和特异性),以便对HCC组织进行可靠的鉴定。最后,对CYP450家族57个成员在10种不同癌症类型中的表达水平进行了全球观察,揭示了特定的表达特征。总的来说,这项研究为HCC中CYP450基因的转录组学景观和新的潜在HCC生物标志物提供了有用的信息。
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引用次数: 7
Inactivated FABP5 suppresses malignant progression of prostate cancer cells by inhibiting the activation of nuclear fatty acid receptor PPARγ. 失活的FABP5通过抑制核脂肪酸受体PPARγ的激活来抑制前列腺癌细胞的恶性进展。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-05-01 DOI: 10.18632/genesandcancer.192
Waseem Al-Jameel, Xiaojun Gou, Xi Jin, Jiacheng Zhang, Qiang Wei, Jianzhong Ai, Hong Li, Asmaa Al-Bayati, Angela Platt-Higgins, Andrew Pettitt, Philip S Rudland, Youqiang Ke

Previous study has suggested that the FABP5-PPARγ-signalling transduction pathway gradually replaces the androgen receptor activated pathway in promoting malignant progression of castration-resistant prostate cancer (CRPC) cells. To interfere with this newly discovered FABP5-related signalling pathway, we have produced a highly efficient recombinant FABP5 inhibitor, named dmrFABP5. Treatment with dmrFABP5 significantly supressed the proliferation, migration, invasion and colony formation of the highly malignant prostate cancer cells PC3-M in vitro. To test dmrFABP5's suppressive effect in CRPC, the human PC3-M cells were implanted orthotopically into the prostate gland of immunosuppressed mice to produce tumours. These mice were then treated with dmrFABP5 and produced a highly significant reduction of 100% in metastatic rate and a highly significant reduction of 13-fold in the average size of primary tumours. Immunocytochemial staining showed that the staining intensity of dmrFABP5 treated tumours was reduced by 67%. When tested in vitro, dmrFABP5 suppressed the cancer cells by blocking fatty acid stimulation of PPARγ, and thereby prevented it activating down-stream cancer-promoting or inhibiting cancer-suppressing genes. Our results show that the FABP5 inhibitor dmrFABP5 is a novel molecule for treatment of experimental CRPC and its inhibitory effect is much greater than that produced by SB-FI-26 reported in our previous work.

既往研究表明,fabp5 - ppar γ信号转导通路逐渐取代雄激素受体激活通路,促进去势抵抗性前列腺癌(CRPC)细胞的恶性进展。为了干扰这个新发现的FABP5相关信号通路,我们生产了一种高效的重组FABP5抑制剂,命名为dmrFABP5。dmrFABP5可显著抑制体外高度恶性前列腺癌细胞PC3-M的增殖、迁移、侵袭和集落形成。为了检测dmrFABP5对CRPC的抑制作用,我们将人PC3-M细胞原位植入免疫抑制小鼠的前列腺,使其产生肿瘤。然后用dmrFABP5治疗这些小鼠,转移率显著降低100%,原发肿瘤的平均大小显著降低13倍。免疫细胞化学染色显示dmrFABP5处理的肿瘤染色强度降低67%。在体外实验中,dmrFABP5通过阻断脂肪酸对PPARγ的刺激来抑制癌细胞,从而阻止其激活下游促癌或抑制抑癌基因。我们的研究结果表明,FABP5抑制剂dmrFABP5是一种治疗实验性CRPC的新分子,其抑制作用远远大于我们之前报道的SB-FI-26。
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引用次数: 0
Tumour Suppressor Genes with Oncogenic Roles in Lung Cancer 肿瘤抑制基因在肺癌中的致癌作用
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-04-16 DOI: 10.5772/INTECHOPEN.85017
M. Barros-Filho, F. Guisier, Leigha D. Rock, Daiana D. Becker-Santos, Adam P Sage, E. Marshall, W. Lam
Lung cancer is one of the most common cancers and the leading cause of cancer-related deaths worldwide. High-throughput sequencing efforts have uncovered the molecular heterogeneity of this disease, unveiling several genetic and epigenetic disruptions driving its development. Unlike oncogenes, tumour suppressor genes negatively regulate cell cycle control and exhibit loss-of-function alterations in cancer. Although tumour suppressor genes are more frequently disrupted, oncogenes are more likely to be drug-targeted. Many genes are described as presenting both tumour suppressive and oncogenic functions in different tumour types or even within the natural history of the disease in a single tumour. In this chapter, we describe current knowledge of tumour suppressor genes in lung tissues, focusing on tumour suppressor/oncogene duality.
肺癌是最常见的癌症之一,也是全球癌症相关死亡的主要原因。高通量测序工作揭示了这种疾病的分子异质性,揭示了推动其发展的几种遗传和表观遗传破坏。与癌基因不同,肿瘤抑制基因负性调节细胞周期控制,并在癌症中表现出功能丧失的改变。尽管肿瘤抑制基因更容易被破坏,但致癌基因更有可能成为药物靶向。许多基因被描述为在不同的肿瘤类型中表现出肿瘤抑制和致癌功能,甚至在单个肿瘤的自然病史中也表现出肿瘤抑制和致癌功能。在本章中,我们描述了目前对肺组织中肿瘤抑制基因的了解,重点是肿瘤抑制基因/癌基因的二元性。
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引用次数: 6
Chronic low dose arsenic exposure preferentially perturbs mitotic phase of the cell cycle. 慢性低剂量砷暴露优先扰乱细胞周期的有丝分裂期。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-02-01 DOI: 10.18632/genesandcancer.185
Suthakar Ganapathy, Jian Liu, Rui Xiong, Tianqi Yu, Alexandros Makriyannis, Changyan Chen

Environmental pollution is a big challenge for human survival. Arsenic compounds are well-known biohazard, the exposure of which is closely linked to onsets of various human diseases, particularly cancers. Upon chronically exposing to arsenic compounds, genomic integrity is often disrupted, leading to tumor development. However, the underlying mechanisms by which chronic, low dose arsenic exposure targets genetic stability to initiate carcinogenesis still remain not fully understood. In this study, human lung epithelial BEAS-2B cells and keratinocytes were treated with 0.5 μM of sodium arsenite for one month (designated as BEAS-2B-SA cells or keratinocytes-SA), and its effect on cell cycle responses was analyzed. After being arrested in mitotic phase of the cell cycle by nocodazole treatment, BEAS-2B-SA cells or keratinocytes-SA were delayed to enter next cytokinesis. The lagging exit of the cells from mitosis was accompanied by a sustained Plk1 phosphorylation, which led to a persistent activation of the mitotic regulators BubR1 and Cdc27. As the result, cyclin B1 (clnB1) degradation was attenuated. BEAS-2B-SA cells or keratinocytes-SA also expressed a constitutively active Akt. The cytogenetic analysis showed an increased numbers of aneuploidy in these cells. The suppression of Akt reversed the aberrant expressions of the mitotic regulators, delay of mitotic exit as well as chromosomal aberrations. Our findings suggest that a long-term exposure to low dose sodium arsenite aberrantly retains the catenation of mitosis, which facilitates establishing genetic instability and predisposes the cells to tumorigenesis.

环境污染是人类生存面临的巨大挑战。砷化合物是众所周知的生物危害,接触砷与各种人类疾病,特别是癌症的发病密切相关。在长期暴露于砷化合物后,基因组完整性经常被破坏,导致肿瘤的发展。然而,慢性低剂量砷暴露以遗传稳定性为目标引发致癌的潜在机制仍未完全了解。本研究采用0.5 μM亚砷酸钠处理人肺上皮BEAS-2B细胞和角质形成细胞1个月(分别称为BEAS-2B- sa细胞或角化细胞- sa),分析其对细胞周期反应的影响。经诺可达唑处理后,BEAS-2B-SA细胞或角化细胞- sa被阻滞在细胞周期的有丝分裂期,延迟进入下一个细胞分裂期。细胞有丝分裂的滞后退出伴随着持续的Plk1磷酸化,这导致有丝分裂调节因子BubR1和Cdc27的持续激活。结果,细胞周期蛋白B1 (clnB1)降解减弱。BEAS-2B-SA细胞或角化细胞- sa也表达构成型活性Akt。细胞遗传学分析显示,这些细胞的非整倍体数量增加。Akt的抑制逆转了有丝分裂调控因子的异常表达、有丝分裂退出延迟以及染色体畸变。我们的研究结果表明,长期暴露于低剂量亚砷酸钠会异常地保留有丝分裂的链状链,这有助于建立遗传不稳定性并使细胞容易发生肿瘤。
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引用次数: 10
Targeting RNA helicase DDX3 in stem cell maintenance and teratoma formation. 靶向RNA解旋酶DDX3在干细胞维持和畸胎瘤形成中的作用。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-02-01 DOI: 10.18632/genesandcancer.187
Candace L Kerr, Guus M Bol, Farhad Vesuna, Venu Raman
DDX3 is an RNA helicase that has antiapoptotic properties, and promotes proliferation and transformation. Besides the role of DDX3 in transformed cells, there is evidence to indicate that DDX3 expression is at its highest levels during early embryonic development and is also expressed in germ cells of adults. Even though there is a distinct pattern of DDX3 expression during embryonic development and in adults, very little is known regarding its role in embryonic stem cells and pluripotency. In this work, we examined the relationship between DDX3 and human embryonic stem cells and its differentiated lineages. DDX3 expression was analyzed by immunohistochemistry in human embryonic stem cells and embryonal carcinoma cells. From the data obtained, it was evident that DDX3 was overexpressed in undifferentiated stem cells compared to differentiated cells. Moreover, when DDX3 expression was abrogated in multiple stem cells, proliferation was decreased, but differentiation was facilitated. Importantly, this resulted in reduced potency to induce teratoma formation. Taken together, these findings indicate a distinct role for DDX3 in stem cell maintenance.
DDX3是一种具有抗凋亡特性的RNA解旋酶,可促进细胞增殖和转化。除了DDX3在转化细胞中发挥作用外,有证据表明,DDX3在胚胎早期发育时表达水平最高,在成体生殖细胞中也有表达。尽管DDX3在胚胎发育和成人中有独特的表达模式,但对其在胚胎干细胞和多能性中的作用知之甚少。在这项工作中,我们研究了DDX3与人胚胎干细胞及其分化谱系的关系。免疫组化法分析DDX3在人胚胎干细胞和胚胎癌细胞中的表达。从获得的数据可以明显看出,与分化细胞相比,DDX3在未分化干细胞中过表达。此外,当DDX3在多干细胞中表达时,增殖减少,但分化促进。重要的是,这导致了诱导畸胎瘤形成的效力降低。综上所述,这些发现表明DDX3在干细胞维持中具有独特的作用。
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引用次数: 10
Utilizing cell line-derived organoids to evaluate the efficacy of a novel LIFR-inhibitor, EC359 in targeting pancreatic tumor stroma. 利用细胞系衍生的类器官评估一种新型lifr抑制剂EC359靶向胰腺肿瘤基质的疗效。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-02-01 DOI: 10.18632/genesandcancer.184
Bradley R Hall, Andrew Cannon, Christopher Thompson, Bindu Santhamma, Alejandra Chavez-Riveros, Rakesh Bhatia, Hareesh B Nair, Klaus Nickisch, Surinder K Batra, Sushil Kumar

Survival of pancreatic cancer (PC) patient is poor due to lack of effective treatment modalities, which is partly due to the presence of dense desmoplasia that impedes the delivery of chemotherapeutics. Therefore, PC stroma-targeting therapies are expected to improve the efficacy of chemotherapeutics. However, in vitro evaluation of stromal-targeted therapies requires a culture system which includes components of both tumor stroma and parenchyma. We aim to generate a cell line-derived 3D organoids to test the efficacy of stromal-targeted, LIFR-inhibitor EC359. Murine PC (FC1245) and stellate (ImPaSC) cells were cultured to generate organoids that recapitulated the histological organization of PC with the formation of ducts by epithelial cells surrounded by activated fibroblasts, as indicated by CK19 and α-SMA staining, respectively. Analysis by qRT-PCR demonstrated a significant downregulation of markers of activated stroma, POSTN, FN1, MMP9, and SPARC (p<0.0001), when treated with gemcitabine in combination with EC359. Concurrently, collagen proteins including COL1A1, COL1A2, COL3A1, and COL5A1 were significantly downregulated (p <0.0001) after treatment with gemcitabine in combination with EC359. Overall, our study demonstrates the utility of cell lines-derived 3D organoids to evaluate the efficacy of stroma-targeted therapies as well as the potential of EC359 to target activated stroma in PC.

由于缺乏有效的治疗方式,胰腺癌(PC)患者的生存率很低,部分原因是存在致密的结缔组织增生,阻碍了化疗药物的传递。因此,PC基质靶向治疗有望提高化疗药物的疗效。然而,基质靶向治疗的体外评估需要一个包括肿瘤基质和实质成分的培养系统。我们的目标是生成一种细胞系衍生的3D类器官,以测试基质靶向的lifr抑制剂EC359的功效。小鼠PC细胞(FC1245)和星状细胞(ImPaSC)分别通过CK19和α-SMA染色显示,上皮细胞被活化的成纤维细胞包围形成导管,形成了具有PC组织结构的类器官。qRT-PCR分析显示,活化基质、POSTN、FN1、MMP9和SPARC标记物显著下调
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引用次数: 16
Transcriptomic analysis functionally maps the intrinsically disordered domain of EWS/FLI and reveals novel transcriptional dependencies for oncogenesis. 转录组学分析从功能上绘制了EWS/FLI的内在紊乱结构域,并揭示了肿瘤发生的新的转录依赖性。
Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-02-01 DOI: 10.18632/genesandcancer.188
Emily R Theisen, Kyle R Miller, Iftekhar A Showpnil, Cenny Taslim, Kathleen I Pishas, Stephen L Lessnick

EWS/FLI is the pathognomic fusion oncoprotein that drives Ewing sarcoma. The amino-terminal EWS portion coordinates transcriptional regulation and the carboxy-terminal FLI portion contains an ETS DNA-binding domain. EWS/FLI acts as an aberrant transcription factor, orchestrating a complex mix of gene activation and repression, from both high affinity ETS motifs and repetitive GGAA-microsatellites. Our overarching hypothesis is that executing multi-faceted transcriptional regulation requires EWS/FLI to use distinct molecular mechanisms at different loci. Many attempts have been made to map distinct functions to specific features of the EWS domain, but described deletion mutants are either fully active or completely "dead" and other approaches have been limited by the repetitive and disordered nature of the EWS domain. Here, we use transcriptomic approaches to show an EWS/FLI mutant, called DAF, previously thought to be nonfunctional, displays context-dependent and partial transcriptional activity but lacks transforming capacity. Using transcriptomic and phenotypic anchorage-independent growth profiles of other EWS/FLI mutants coupled with reported EWS/FLI localization data, we have mapped the critical structure-function requirements of the EWS domain for EWS/FLI-mediated oncogenesis. This approach defined unique classes of EWS/FLI response elements and revealed novel structure-function relationships required for EWS/FLI activation at these response elements.

EWS/FLI是驱动Ewing肉瘤的病理融合癌蛋白。氨基末端EWS部分协调转录调控,羧基末端FLI部分包含一个ETS dna结合域。EWS/FLI作为一种异常转录因子,从高亲和力的ETS基序和重复的ggaa微卫星中协调基因激活和抑制的复杂组合。我们的首要假设是,执行多方面的转录调控需要EWS/FLI在不同的位点上使用不同的分子机制。已经有许多尝试将不同的功能映射到EWS结构域的特定特征,但是所描述的缺失突变体要么完全活跃,要么完全“死亡”,并且其他方法受到EWS结构域的重复和无序性质的限制。在这里,我们使用转录组学方法来显示EWS/FLI突变,称为DAF,以前被认为是无功能的,显示上下文依赖和部分转录活性,但缺乏转化能力。利用其他EWS/FLI突变体的转录组学和表型锚定非依赖性生长谱,结合已报道的EWS/FLI定位数据,我们绘制了EWS结构域在EWS/FLI介导的肿瘤发生中的关键结构-功能要求。该方法定义了EWS/FLI反应元件的独特类别,并揭示了在这些反应元件上激活EWS/FLI所需的新型结构-功能关系。
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引用次数: 14
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