Pub Date : 2024-04-21DOI: 10.1134/S000368382402011X
D. H. Mir, M. A. Rather
A community of microorganisms adhered to a solid surface and entrapped in a self-produced extracellular polymeric matrix, in general is referred to as a ‘biofilm’. Biofilm formation is a phenomenon naturally exhibited by the majority of microorganisms, (except a few like Pelagibacter and some planktonic bacteria). The trait of biofilm formation by the microorganisms allows them to survive in harsh environments, important for their existence and sustenance. To form biofilms, microorganisms possess a supportive genetic makeup, which enables them to function and grow in a coordinated manner. Surprisingly at present, there is a lack of proper consensus regarding the utilization of technique and methodologies available in the precise analysis, growth and characterization of biofilms. The current review aims to bridge this gap by presenting a detailed review of the available study methods and tools the most promising in the detection, growth and characterization of biofilms. The selection of the most appropriate biofilm study and analysis method in a given situation is of utmost importance in order to understand the formation and prospective fruitful utilization of biofilms by humankind.
{"title":"Advantages and Limitations of the Biofilm Study Methods","authors":"D. H. Mir, M. A. Rather","doi":"10.1134/S000368382402011X","DOIUrl":"10.1134/S000368382402011X","url":null,"abstract":"<p>A community of microorganisms adhered to a solid surface and entrapped in a self-produced extracellular polymeric matrix, in general is referred to as a ‘biofilm’. Biofilm formation is a phenomenon naturally exhibited by the majority of microorganisms, (except a few like <i>Pelagibacter</i> and some planktonic bacteria). The trait of biofilm formation by the microorganisms allows them to survive in harsh environments, important for their existence and sustenance. To form biofilms, microorganisms possess a supportive genetic makeup, which enables them to function and grow in a coordinated manner. Surprisingly at present, there is a lack of proper consensus regarding the utilization of technique and methodologies available in the precise analysis, growth and characterization of biofilms. The current review aims to bridge this gap by presenting a detailed review of the available study methods and tools the most promising in the detection, growth and characterization of biofilms. The selection of the most appropriate biofilm study and analysis method in a given situation is of utmost importance in order to understand the formation and prospective fruitful utilization of biofilms by humankind.</p>","PeriodicalId":466,"journal":{"name":"Applied Biochemistry and Microbiology","volume":"60 2","pages":"264 - 279"},"PeriodicalIF":1.0,"publicationDate":"2024-04-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140767306","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-04-21DOI: 10.1134/S0003683824020066
A. V. Il’ina, B. Ts. Shagdarova, A. A. Zubareva, V. P. Varlamov
This review article includes information on the use of coatings, both from chitosan itself and in combination with other polysaccharides and functional compounds, for postharvest processing, mainly of tomatoes, to extend the shelf life of harvested produce. During harvesting of fruit and vegetables, losses due to fungal infection can be as high as 50%. To prevent yield losses and preserve fruit quality, various methods of postharvest treatment are used. Currently, the most effective means used to control postharvest diseases are synthetic fungicides, but their uncontrolled use negatively affects human health and the environment. Recently, there has been a continuing trend to increase the use of natural antimicrobial agents. Such natural compounds can be chitin and chitosan, as they are renewable, biodegradable, have low toxicity, and are safe for consumers and the environment. The film-forming ability of chitosan and its antimicrobial and antioxidant properties are important for obtaining functional coatings for postharvest processing of fruit.
{"title":"Chitosan-Based Functional Coatings for Postharvest Processing of Tomatoes","authors":"A. V. Il’ina, B. Ts. Shagdarova, A. A. Zubareva, V. P. Varlamov","doi":"10.1134/S0003683824020066","DOIUrl":"10.1134/S0003683824020066","url":null,"abstract":"<div><p>This review article includes information on the use of coatings, both from chitosan itself and in combination with other polysaccharides and functional compounds, for postharvest processing, mainly of tomatoes, to extend the shelf life of harvested produce. During harvesting of fruit and vegetables, losses due to fungal infection can be as high as 50%. To prevent yield losses and preserve fruit quality, various methods of postharvest treatment are used. Currently, the most effective means used to control postharvest diseases are synthetic fungicides, but their uncontrolled use negatively affects human health and the environment. Recently, there has been a continuing trend to increase the use of natural antimicrobial agents. Such natural compounds can be chitin and chitosan, as they are renewable, biodegradable, have low toxicity, and are safe for consumers and the environment. The film-forming ability of chitosan and its antimicrobial and antioxidant properties are important for obtaining functional coatings for postharvest processing of fruit.</p></div>","PeriodicalId":466,"journal":{"name":"Applied Biochemistry and Microbiology","volume":"60 2","pages":"175 - 184"},"PeriodicalIF":1.0,"publicationDate":"2024-04-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140798141","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-04-21DOI: 10.1134/S0003683824020200
S. Zabci, S. Kocabiyik
Small heat shock proteins (sHSPs) are composed of the α-crystallin domain, which is highly conserved, and variable N-terminal and C-terminal domains. In contrast to the α-crystallin domain, structures of the flanking N- and C-terminal domains are poorly defined. The N-terminal domain is the most divergent region in sequence and length among small heat shock proteins. In this study, to provide further insight into the importance of N-terminal tags in the chaperone function of small heat shock proteins, two variants of Tpv HSP 14.3 containing polyhistidine tags (11-aa and 26-aa in length) in the proximal part of their N-termini were used. These variants were generated by expressing the cloned Tpv HSP 14.3 gene in Escherichia coli using the expression vectors pQE-31 and TAGZyme pQE-2. The His-tagged recombinant proteins were purified by affinity chromatography. The effects of poly-His tags on chaperone activity of the Tpv HSP 14.3 were evaluated using pig heart citrate synthase as the model substrate. The results showed that Tpv HSP 14.3 variants with N-terminal tags were more effective chaperones than the one without tag. In addition, the alterations in intrinsically disordered states of N-termini were analyzed by means of the PONDR predictor. The results indicated that the disordered nature of the fused tags and additional hydrophobic residues they contributed to the N terminus may increase the capacity of Tpv HSP 14.3 to interact with its substrate protein and thereby improve its chaperone activity.
小热休克蛋白(sHSPs)由高度保守的α-结晶素结构域以及可变的N-端和C-端结构域组成。与 α-结晶素结构域不同,侧翼 N 端和 C 端结构域的结构尚不明确。N 端结构域是小型热休克蛋白中序列和长度差异最大的区域。在本研究中,为了进一步了解 N 端标签在小型热休克蛋白伴侣功能中的重要性,我们使用了两个在 Tpv HSP 14.3 的 N 端近端部分含有聚组氨酸标签(长度分别为 11-aa 和 26-aa)的变体。这些变体是通过使用表达载体 pQE-31 和 TAGZyme pQE-2 在大肠杆菌中表达克隆的 Tpv HSP 14.3 基因产生的。用亲和层析法纯化了 His 标记的重组蛋白。以猪心柠檬酸合成酶为模型底物,评估了多His标签对Tpv HSP 14.3伴侣活性的影响。结果表明,带有 N 端标签的 Tpv HSP 14.3 变体比不带有标签的变体更有效。此外,还利用 PONDR 预测器分析了 N 端内在无序状态的变化。结果表明,融合标签的无序性及其在 N 端贡献的额外疏水残基可能会增加 Tpv HSP 14.3 与其底物蛋白相互作用的能力,从而提高其伴侣活性。
{"title":"Structural and Functional Impacts of Extended N-Terminal End of the Small Heat Shock Protein Tpv HSP 14.3","authors":"S. Zabci, S. Kocabiyik","doi":"10.1134/S0003683824020200","DOIUrl":"10.1134/S0003683824020200","url":null,"abstract":"<p>Small heat shock proteins (sHSPs) are composed of the α-crystallin domain, which is highly conserved, and variable N-terminal and C-terminal domains. In contrast to the α-crystallin domain, structures of the flanking N- and C-terminal domains are poorly defined. The N-terminal domain is the most divergent region in sequence and length among small heat shock proteins. In this study, to provide further insight into the importance of N-terminal tags in the chaperone function of small heat shock proteins, two variants of <i>Tpv</i> HSP 14.3 containing polyhistidine tags (11-aa and 26-aa in length) in the proximal part of their N-termini were used. These variants were generated by expressing the cloned <i>Tpv</i> HSP 14.3 gene in <i>Escherichia coli</i> using the expression vectors pQE-31 and TAGZyme pQE-2. The His-tagged recombinant proteins were purified by affinity chromatography. The effects of poly-His tags on chaperone activity of the <i>Tpv</i> HSP 14.3 were evaluated using pig heart citrate synthase as the model substrate. The results showed that <i>Tpv</i> HSP 14.3 variants with N-terminal tags were more effective chaperones than the one without tag. In addition, the alterations in intrinsically disordered states of N-termini were analyzed by means of the PONDR predictor. The results indicated that the disordered nature of the fused tags and additional hydrophobic residues they contributed to the N terminus may increase the capacity of <i>Tpv</i> HSP 14.3 to interact with its substrate protein and thereby improve its chaperone activity.</p>","PeriodicalId":466,"journal":{"name":"Applied Biochemistry and Microbiology","volume":"60 2","pages":"287 - 293"},"PeriodicalIF":1.0,"publicationDate":"2024-04-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140772706","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-04-21DOI: 10.1134/S0003683824020145
E. V. Popova, N. S. Domnina, I. I. Novikova, N. M. Kovalenko, I. L. Krasnobaeva, I. M. Zorin
An assessment of the antifungal and immunomodulatory activity of dispersions of chitosan nanoparticles obtained by fractional precipitation at pH 5.0 and pH 7.5 using chitosan of different molecular weights was made. The dispersion of nanoparticles obtained at pH 5 has increased fungistatic activity against C. sativus and A. solani, due to the higher availability of amino groups in looser nanoparticles. This dispersion showed immunostimulating activity, increasing the resistance of wheat to dark brown spot. It was also established that the elicitor activity of dispersions of chitosan nanoparticles is significantly higher than the activity of solutions of the original polymer.
通过使用不同分子量的壳聚糖在 pH 值为 5.0 和 pH 值为 7.5 的条件下进行分馏沉淀得到的壳聚糖纳米粒子分散体的抗真菌和免疫调节活性进行了评估。在 pH 值为 5 时获得的纳米颗粒分散液对 C. sativus 和 A. solani 的抑菌活性更高,这是因为在较松散的纳米颗粒中氨基的可用性更高。这种分散体具有免疫刺激活性,能提高小麦对黑褐斑病的抗性。研究还证实,壳聚糖纳米颗粒分散体的诱导剂活性明显高于原始聚合物溶液的活性。
{"title":"Biological Activity of Chitosan Nanoparticle Dispersions Produced by Fractional Precipitation","authors":"E. V. Popova, N. S. Domnina, I. I. Novikova, N. M. Kovalenko, I. L. Krasnobaeva, I. M. Zorin","doi":"10.1134/S0003683824020145","DOIUrl":"10.1134/S0003683824020145","url":null,"abstract":"<div><p>An assessment of the antifungal and immunomodulatory activity of dispersions of chitosan nanoparticles obtained by fractional precipitation at pH 5.0 and pH 7.5 using chitosan of different molecular weights was made. The dispersion of nanoparticles obtained at pH 5 has increased fungistatic activity against <i>C. sativus</i> and <i>A. solani</i>, due to the higher availability of amino groups in looser nanoparticles. This dispersion showed immunostimulating activity, increasing the resistance of wheat to dark brown spot. It was also established that the elicitor activity of dispersions of chitosan nanoparticles is significantly higher than the activity of solutions of the original polymer.</p></div>","PeriodicalId":466,"journal":{"name":"Applied Biochemistry and Microbiology","volume":"60 2","pages":"226 - 230"},"PeriodicalIF":1.0,"publicationDate":"2024-04-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140782672","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-04-21DOI: 10.1134/S0003683824020157
I. D. Radojević, K. G. Ćirković, M. Ž. Grujović, K. G. Mladenović, A. M. Ostojić
lWater samples were collected from a tailings pond wastewater site in the Rudnik mountain area, where polymetallic ore flotation processes generate high concentrations of Pb2+, Zn2+, and Cu2+. The study aimed to identify microorganisms resistant to heavy metals and assess their potential for bioremediation. Growth capabilities under varying conditions, including temperature, pH, and NaCl concentrations, were analyzed using a spectrophotometer. Minimal inhibitory and lethal concentrations of tested substances were determined for both planktonic cells and their biofilms. Key isolates, namely Bacillus altitudinis PMFKG-R3, B. pumilus PMFKG-R15, B. cereus PMFKG-R46, Pseudomonas veronii PMFKG-R30, and Pantoea agglomerans PMFKG-R20, demonstrated growth ability at both 22 and 37°C and exhibited halotolerance, albeit sensitivity to acidic pH. Most isolates in both planktonic and biofilm forms displayed notable resistance to heavy metals, particularly Pb2+ and Zn2+, in line with the sampling location. Notably, planktonic cells were sensitive to antibiotics, while biofilms exhibited slightly higher resistance. Promising candidates for bioremediation purposes were identified in P. veronii PMFKG-R30 and P. agglomerans PMFKG-R20, which displayed resistance to heavy metals and sensitivity to antibiotics.
{"title":"Characterization of Bacterial Isolates from Tailings Pond and Their Resistance to Heavy Metals and Antibiotics","authors":"I. D. Radojević, K. G. Ćirković, M. Ž. Grujović, K. G. Mladenović, A. M. Ostojić","doi":"10.1134/S0003683824020157","DOIUrl":"10.1134/S0003683824020157","url":null,"abstract":"<p>lWater samples were collected from a tailings pond wastewater site in the Rudnik mountain area, where polymetallic ore flotation processes generate high concentrations of Pb<sup>2+</sup>, Zn<sup>2+</sup>, and Cu<sup>2+</sup>. The study aimed to identify microorganisms resistant to heavy metals and assess their potential for bioremediation. Growth capabilities under varying conditions, including temperature, pH, and NaCl concentrations, were analyzed using a spectrophotometer. Minimal inhibitory and lethal concentrations of tested substances were determined for both planktonic cells and their biofilms. Key isolates, namely <i>Bacillus altitudinis</i> PMFKG-R3, <i>B. pumilus</i> PMFKG-R15, <i>B. cereus</i> PMFKG-R46, <i>Pseudomonas veronii</i> PMFKG-R30, and <i>Pantoea agglomerans</i> PMFKG-R20, demonstrated growth ability at both 22 and 37°C and exhibited halotolerance, albeit sensitivity to acidic pH. Most isolates in both planktonic and biofilm forms displayed notable resistance to heavy metals, particularly Pb<sup>2+</sup> and Zn<sup>2+</sup>, in line with the sampling location. Notably, planktonic cells were sensitive to antibiotics, while biofilms exhibited slightly higher resistance. Promising candidates for bioremediation purposes were identified in <i>P. veronii</i> PMFKG-R30 and <i>P. agglomerans</i> PMFKG-R20, which displayed resistance to heavy metals and sensitivity to antibiotics.</p>","PeriodicalId":466,"journal":{"name":"Applied Biochemistry and Microbiology","volume":"60 2","pages":"347 - 357"},"PeriodicalIF":1.0,"publicationDate":"2024-04-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140760300","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-04-21DOI: 10.1134/S0003683824020029
V. N. Davydova, A. V. Volod’ko, V. I. Gorbach, S. V. Chusovitina, T. F. Solov’eva, I. M. Yermak
Complexes of lipopolysaccharide (LPS) from the bacterium Escherichia coli and chitosan (CN) with a molecular weight of 5 kDa were obtained and their supramolecular organization was studied. Using atomic force microscopy, it was shown that during the formation of complexes there is a transition from the micellar structure of the original LPS to linear network structures uniformly distributed over the surface of mica. The stability of LPS-CN complexes of various stoichiometries in biological media in the presence of serum proteins was investigated. It was shown that complexes with an LPS–CN ratio of 1 : 1 in the presence of serum proteins lost their surface charge and tended to aggregate while complexes with the maximum saturation of CN (1 : 5) did not aggregate under these conditions and maintained their surface charge. The effect of CNs of different molecular weights on the ability of LPS to interact with neutrophils of human whole blood was studied. It was observed that LPS-CN complexes were capable of binding to neutrophils and internalazing the cell, and this ability was enhanced in the presence of serum proteins. Chitosan exhibited the ability to suppress the synthesis of the proinflammatory cytokine TNF-α induced by LPS, not only as part of the complex but also when cells were pretreated with a polycation.
{"title":"The Influence of Chitosan on the Ability of LPS to Interact with Cells of the Immune System","authors":"V. N. Davydova, A. V. Volod’ko, V. I. Gorbach, S. V. Chusovitina, T. F. Solov’eva, I. M. Yermak","doi":"10.1134/S0003683824020029","DOIUrl":"10.1134/S0003683824020029","url":null,"abstract":"<div><p>Complexes of lipopolysaccharide <b>(LPS)</b> from the bacterium <i>Escherichia coli</i> and chitosan <b>(CN)</b> with a molecular weight of 5 kDa were obtained and their supramolecular organization was studied. Using atomic force microscopy, it was shown that during the formation of complexes there is a transition from the micellar structure of the original LPS to linear network structures uniformly distributed over the surface of mica. The stability of LPS-CN complexes of various stoichiometries in biological media in the presence of serum proteins was investigated. It was shown that complexes with an LPS–CN ratio of 1 : 1 in the presence of serum proteins lost their surface charge and tended to aggregate while complexes with the maximum saturation of CN (1 : 5) did not aggregate under these conditions and maintained their surface charge. The effect of CNs of different molecular weights on the ability of LPS to interact with neutrophils of human whole blood was studied. It was observed that LPS-CN complexes were capable of binding to neutrophils and internalazing the cell, and this ability was enhanced in the presence of serum proteins. Chitosan exhibited the ability to suppress the synthesis of the proinflammatory cytokine TNF-α induced by LPS, not only as part of the complex but also when cells were pretreated with a polycation.</p></div>","PeriodicalId":466,"journal":{"name":"Applied Biochemistry and Microbiology","volume":"60 2","pages":"207 - 215"},"PeriodicalIF":1.0,"publicationDate":"2024-04-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140779789","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-04-21DOI: 10.1134/S0003683824020133
I. I. Novikova, L. E. Kolesnikov, E. V. Popova, B. A. Hassan, N. S. Priyatkin, D. Yu. Radishevskiy, I. L. Krasnobaeva, L. A. Higerovich, Yu. R. Kolesnikova
The influence of multifunctional complexes capable of causing a growth-stimulating effect on plants and inhibiting the development of a wide range of diseases on the Leningradka 6 spring soft wheat cultivar (k-64900) was investigated. In the research, it was found that the application of multifunctional complexes based on the Bacillus subtilis bacterial strains and 0.1% chitosan salicylate in wheat cultivation led to a significant decrease in the incidence of plant diseases: yellow and brown rust, powdery mildew, and root rot and caused an increase in morphometric productivity indicators. This tendency was associated with a significant influence of multifunctional complexes on the increase in the number of primary and nodal roots, the length of nodal roots, productive bushiness, the number of spikelets per spike, and the grains weight per spike. However, the effectiveness of protective and stimulating wheat treatments depended on the complex of natural and climatic factors of wheat vegetation seasons.
{"title":"The Biological Efficiencies of Multifunctional Complexes Based on Bacillus subtilis Strains and Chitosan Salicylate in Wheat Cultivation","authors":"I. I. Novikova, L. E. Kolesnikov, E. V. Popova, B. A. Hassan, N. S. Priyatkin, D. Yu. Radishevskiy, I. L. Krasnobaeva, L. A. Higerovich, Yu. R. Kolesnikova","doi":"10.1134/S0003683824020133","DOIUrl":"10.1134/S0003683824020133","url":null,"abstract":"<div><p>The influence of multifunctional complexes capable of causing a growth-stimulating effect on plants and inhibiting the development of a wide range of diseases on the Leningradka 6 spring soft wheat cultivar (k-64900) was investigated. In the research, it was found that the application of multifunctional complexes based on the <i>Bacillus subtilis</i> bacterial strains and 0.1% chitosan salicylate in wheat cultivation led to a significant decrease in the incidence of plant diseases: yellow and brown rust, powdery mildew, and root rot and caused an increase in morphometric productivity indicators. This tendency was associated with a significant influence of multifunctional complexes on the increase in the number of primary and nodal roots, the length of nodal roots, productive bushiness, the number of spikelets per spike, and the grains weight per spike. However, the effectiveness of protective and stimulating wheat treatments depended on the complex of natural and climatic factors of wheat vegetation seasons.</p></div>","PeriodicalId":466,"journal":{"name":"Applied Biochemistry and Microbiology","volume":"60 2","pages":"251 - 263"},"PeriodicalIF":1.0,"publicationDate":"2024-04-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140784221","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-04-21DOI: 10.1134/S0003683824020121
I. I. Novikova, E. V. Popova, N. M. Kovalenko, I. L. Krasnobaeva
The aim of this work was to study the effect of Bacillus subtilis strains VKM B-2604D and VKM B-2605D, which form the basis of the Vitaplan biological product, and their combinations with chitosan salicylate on antioxidant defense enzymes in the process of formation of resistance of wheat plants to infection with the dark brown blotch pathogen Bipolaris sorokiniana. In wheat plants treated with B. subtilis strains and their combinations with chitosan salicylate, upon subsequent infection, catalase and peroxidase are activated, which regulate the intensity of oxidative stress induced by the introduction of the pathogen. Taking the data we obtained into account, it can be assumed that the increase in plant resistance to the pathogen is realized through the control of the activity of antioxidant enzymes (in particular, catalase and peroxidase), which maintain the concentration of H2O2 at the level necessary for the neutralization of the phytopathogen in tissues, including the direct destruction of the invading pathogen and/or activation of crosslinking and lignification of the cell wall. These processes strengthen the cell wall and help contain the spread of the pathogen in the plant. At the same time, protective reactions are also switched on, leading to the development of induced resistance in wheat plants to dark brown spotting, which manifests itself in a decrease in the development of the disease by 25–45% relative to the infected control in the treated plants. The results indicate that the combination of active strains of microorganisms-antagonists of plant pathogens and chitosan salicylate is promising for increasing the biological efficiency and expanding the spectrum of action of the developed biological products.
{"title":"The Effect of Bacillus subtilis in Combination with Chitosan Salicylate on Peroxidase and Catalase Activity in B. sorokiniana Infected Wheat","authors":"I. I. Novikova, E. V. Popova, N. M. Kovalenko, I. L. Krasnobaeva","doi":"10.1134/S0003683824020121","DOIUrl":"10.1134/S0003683824020121","url":null,"abstract":"<div><p>The aim of this work was to study the effect of <i>Bacillus subtilis</i> strains VKM B-2604D and VKM B-2605D, which form the basis of the Vitaplan biological product, and their combinations with chitosan salicylate on antioxidant defense enzymes in the process of formation of resistance of wheat plants to infection with the dark brown blotch pathogen <i>Bipolaris sorokiniana</i>. In wheat plants treated with <i>B. subtilis</i> strains and their combinations with chitosan salicylate, upon subsequent infection, catalase and peroxidase are activated, which regulate the intensity of oxidative stress induced by the introduction of the pathogen. Taking the data we obtained into account, it can be assumed that the increase in plant resistance to the pathogen is realized through the control of the activity of antioxidant enzymes (in particular, catalase and peroxidase), which maintain the concentration of H<sub>2</sub>O<sub>2</sub> at the level necessary for the neutralization of the phytopathogen in tissues, including the direct destruction of the invading pathogen and/or activation of crosslinking and lignification of the cell wall. These processes strengthen the cell wall and help contain the spread of the pathogen in the plant. At the same time, protective reactions are also switched on, leading to the development of induced resistance in wheat plants to dark brown spotting, which manifests itself in a decrease in the development of the disease by 25–45% relative to the infected control in the treated plants. The results indicate that the combination of active strains of microorganisms-antagonists of plant pathogens and chitosan salicylate is promising for increasing the biological efficiency and expanding the spectrum of action of the developed biological products.</p></div>","PeriodicalId":466,"journal":{"name":"Applied Biochemistry and Microbiology","volume":"60 2","pages":"241 - 250"},"PeriodicalIF":1.0,"publicationDate":"2024-04-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140785677","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-04-21DOI: 10.1134/S000368382402008X
H. S. Kim
This study aimed to identify genes related to acetic acid tolerance and elucidate the tolerance mechanism in yeast Saccharomyces cerevisiae as an appropriate eukaryote model. In this study, one tolerant strain exposed to acetic acid stress was isolated by screening a transposon-mediated mutant library and the disrupted gene was identified to be RGD1. In addition, this phenotype related to acetic acid tolerance was confirmed by deletion and overexpressing of this corresponding gene. This mutant strain showed activation of Hog1p and increased expression of the MSN2/4 and STRE-mediated genes such as CTT1 and HSP12 in response to acetic acid stress.
{"title":"Disruption of RGD1 Gene Improves Acetic Acid Tolerance in Saccharomyces cerevisiae","authors":"H. S. Kim","doi":"10.1134/S000368382402008X","DOIUrl":"10.1134/S000368382402008X","url":null,"abstract":"<p>This study aimed to identify genes related to acetic acid tolerance and elucidate the tolerance mechanism in yeast <i>Saccharomyces cerevisiae</i> as an appropriate eukaryote model. In this study, one tolerant strain exposed to acetic acid stress was isolated by screening a transposon-mediated mutant library and the disrupted gene was identified to be <i>RGD1</i>. In addition, this phenotype related to acetic acid tolerance was confirmed by deletion and overexpressing of this corresponding gene. This mutant strain showed activation of Hog1p and increased expression of the <i>MSN2/4</i> and STRE-mediated genes such as <i>CTT1</i> and <i>HSP12</i> in response to acetic acid stress.</p>","PeriodicalId":466,"journal":{"name":"Applied Biochemistry and Microbiology","volume":"60 2","pages":"294 - 300"},"PeriodicalIF":1.0,"publicationDate":"2024-04-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140789994","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-04-01DOI: 10.1134/S0003683824010071
S. Kashyap, T. Kharewal, N. Tehri, N. Verma, A. Gahlaut, V. Hooda
In this work, the diamine oxidase (DAO) produced from pea seedlings was partially purified using ammonium sulphate precipitation, dialysis, and gel filtration chromatography. Partially purified DAO was immobilized covalently with the help of a cross-linker glutaraldehyde onto the chitosan- modified gold electrode. The properties of immobilized enzyme were evaluated by optimum pH, optimum temperature, activity recovery, and recyclability using putrescine dihydrochloride as substrate. After immobilization of DAO, optimum pH ranges from 6.0 to 7.0 did not change and optimum temperature of enzyme changed from 34 to 38°C in comparison to free DAO. The immobilized DAO preserved 81% activity of free DAO and permitted increased stability and reusability of the enzyme than its native form. After 15 cycles of usage, the immobilized DAO maintained around 51% of its original activity, and this activity prolonged for 30 days at 4°C.
在这项工作中,利用硫酸铵沉淀、透析和凝胶过滤色谱法对从豌豆幼苗中产生的二胺氧化酶(DAO)进行了部分纯化。利用交联剂戊二醛将部分纯化的 DAO 共价固定在壳聚糖修饰的金电极上。以盐酸腐胺为底物,通过最适 pH 值、最适温度、活性恢复和可回收性评估了固定化酶的特性。与游离 DAO 相比,固定 DAO 后,酶的最适 pH 值从 6.0 到 7.0 没有变化,最适温度从 34°C 到 38°C。固定化 DAO 保留了游离 DAO 81% 的活性,与原生形态的 DAO 相比,固定化 DAO 提高了酶的稳定性和可重复使用性。经过 15 次循环使用后,固定化 DAO 保持了约 51% 的原始活性,而且这种活性在 4°C 下可持续 30 天。
{"title":"Immobilization and Stabilization of the Pisum sativum Diamine Oxidase onto Chitosan-Modified Gold Electrode","authors":"S. Kashyap, T. Kharewal, N. Tehri, N. Verma, A. Gahlaut, V. Hooda","doi":"10.1134/S0003683824010071","DOIUrl":"10.1134/S0003683824010071","url":null,"abstract":"<p>In this work, the diamine oxidase (DAO) produced from pea seedlings was partially purified using ammonium sulphate precipitation, dialysis, and gel filtration chromatography. Partially purified DAO was immobilized covalently with the help of a cross-linker glutaraldehyde onto the chitosan- modified gold electrode. The properties of immobilized enzyme were evaluated by optimum pH, optimum temperature, activity recovery, and recyclability using putrescine dihydrochloride as substrate. After immobilization of DAO, optimum pH ranges from 6.0 to 7.0 did not change and optimum temperature of enzyme changed from 34 to 38°C in comparison to free DAO. The immobilized DAO preserved 81% activity of free DAO and permitted increased stability and reusability of the enzyme than its native form. After 15 cycles of usage, the immobilized DAO maintained around 51% of its original activity, and this activity prolonged for 30 days at 4°C.</p>","PeriodicalId":466,"journal":{"name":"Applied Biochemistry and Microbiology","volume":"60 1","pages":"155 - 161"},"PeriodicalIF":1.0,"publicationDate":"2024-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140464569","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}