首页 > 最新文献

Applied Biological Chemistry最新文献

英文 中文
Investigation of safety and efficacy of febantel and fenbendazole in fish and exposure assessment 非班太尔和芬苯达唑在鱼类中的安全性和有效性调查及暴露评估
IF 3.2 3区 农林科学 Q3 FOOD SCIENCE & TECHNOLOGY Pub Date : 2024-03-30 DOI: 10.1186/s13765-024-00879-6
Min Ji Kim, Ji Young Kim, Dong Woo Shin, Hyun-Kyung Kim

Fish are susceptible to blood-sucking parasite infections, which cause severe anemia, dyspnea, and ultimately death. However, veterinary drugs available for fish to treat such infectious diseases are lacking; thus, livestock drugs have been repurposed as aquatic animal drugs. Febantel (FBT) and fenbendazole (FBZ) are representative antiparasitic agents for livestock such as cattle, swine, and poultry, and are considered suitable as aquatic animal drugs. Therefore, we investigated the safety and efficacy of FBT and FBZ in fish and performed a risk assessment to determine the maximum residue limit in fish. Most studies indicate that FBT is rapidly converted to FBZ, which is metabolized to oxfendazole and oxfendazole sulfone. FBZ was frequently detectable in the plasma and tissues (e.g., muscle, skin, and the liver) in significant quantities than other metabolites. We regarded the liver as the target organ because reversible hepatocytic changes were observed in fish after administration of 100 mg/kg FBT for 9 days. No toxicological effects, such as increased mortality or decreased appetite, were observed when the fish were administered 50 mg/kg FBT for 3 days. The efficacy of the drugs was verified in various parasites, including H. heterocerca, H. okamotoi or Z. japonica, and M. seriolae, as causative agents of beko disease through laboratory and field trials. Although toxicity studies on FBZ in fish are limited, its safety has been demonstrated from toxicity studies in a wide range of animal models. The risk from using FBT and FBZ was negligible for human health because the ratio of the estimates of dietary exposure and acceptable daily intake was 78.4%.

鱼类易受吸血寄生虫感染,导致严重贫血、呼吸困难,最终死亡。然而,鱼类缺乏治疗此类传染病的兽药;因此,家畜药物被重新用作水生动物药物。非班太尔(FBT)和芬苯达唑(FBZ)是牛、猪和家禽等家畜的代表性抗寄生虫药物,被认为适合用作水生动物药物。因此,我们调查了 FBT 和 FBZ 在鱼类中的安全性和有效性,并进行了风险评估,以确定鱼类中的最大残留限量。大多数研究表明,FBT 会迅速转化为 FBZ,FBZ 会代谢为奥芬达唑和奥芬达唑砜。与其他代谢物相比,FBZ 经常在血浆和组织(如肌肉、皮肤和肝脏)中被大量检测到。我们将肝脏视为目标器官,因为在连续 9 天施用 100 毫克/千克 FBT 后,在鱼体内观察到了可逆的肝细胞变化。给鱼服用 50 毫克/千克 FBT 3 天后,未观察到死亡率上升或食欲下降等毒理效应。通过实验室和实地试验,验证了这些药物对各种寄生虫的疗效,包括异尖线虫(H. heterocerca)、H. okamotoi 或 Z. japonica 以及 M. seriolae,它们都是鳖疫病的病原体。虽然对 FBZ 在鱼类中的毒性研究有限,但在多种动物模型中进行的毒性研究已证明其安全性。使用 FBT 和 FBZ 对人类健康造成的风险可以忽略不计,因为膳食暴露量估计值与每日可接受摄入量之比为 78.4%。
{"title":"Investigation of safety and efficacy of febantel and fenbendazole in fish and exposure assessment","authors":"Min Ji Kim,&nbsp;Ji Young Kim,&nbsp;Dong Woo Shin,&nbsp;Hyun-Kyung Kim","doi":"10.1186/s13765-024-00879-6","DOIUrl":"10.1186/s13765-024-00879-6","url":null,"abstract":"<div><p>Fish are susceptible to blood-sucking parasite infections, which cause severe anemia, dyspnea, and ultimately death. However, veterinary drugs available for fish to treat such infectious diseases are lacking; thus, livestock drugs have been repurposed as aquatic animal drugs. Febantel (FBT) and fenbendazole (FBZ) are representative antiparasitic agents for livestock such as cattle, swine, and poultry, and are considered suitable as aquatic animal drugs. Therefore, we investigated the safety and efficacy of FBT and FBZ in fish and performed a risk assessment to determine the maximum residue limit in fish. Most studies indicate that FBT is rapidly converted to FBZ, which is metabolized to oxfendazole and oxfendazole sulfone. FBZ was frequently detectable in the plasma and tissues (e.g., muscle, skin, and the liver) in significant quantities than other metabolites. We regarded the liver as the target organ because reversible hepatocytic changes were observed in fish after administration of 100 mg/kg FBT for 9 days. No toxicological effects, such as increased mortality or decreased appetite, were observed when the fish were administered 50 mg/kg FBT for 3 days. The efficacy of the drugs was verified in various parasites, including <i>H. heterocerca, H. okamotoi or Z. japonica</i>, and <i>M. seriolae</i>, as causative agents of beko disease through laboratory and field trials. Although toxicity studies on FBZ in fish are limited, its safety has been demonstrated from toxicity studies in a wide range of animal models. The risk from using FBT and FBZ was negligible for human health because the ratio of the estimates of dietary exposure and acceptable daily intake was 78.4%.</p></div>","PeriodicalId":467,"journal":{"name":"Applied Biological Chemistry","volume":"67 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-03-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://applbiolchem.springeropen.com/counter/pdf/10.1186/s13765-024-00879-6","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140328974","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Nutrient recycling of source-separated human faeces using biochar immobilized indigenous psychrotrophic bacteria for sustaining the agroecosystems of north-western Himalaya 利用固定本地精神营养细菌的生物炭,对源分离的人类粪便进行营养循环,以维持喜马拉雅西北部的农业生态系统
IF 3.2 3区 农林科学 Q3 FOOD SCIENCE & TECHNOLOGY Pub Date : 2024-03-29 DOI: 10.1186/s13765-024-00887-6
Shruti Sinai Borker, Aman Thakur, Krishna Kanta Pandey, Pallavi Sharma, Vivek Manyapu, Abhishek Khatri, Rakshak Kumar

The Himalayan composting toilets (CTs) offer a sustainable solution for converting human faeces (HF) into compost, supplementing the low-fertile land of the region. However, CTs face challenges such as delayed composting processes (6–8 months), increased heavy metal content, and foul odour. Therefore, the current study evaluated biochar-amended psychrotrophic bacteria for HF degradation under low-temperature conditions (10 ± 2 °C). Out of 153 psychrotrophic bacteria isolated from HF compost, 17 bacterial strains were selected based on highest and two or more hydrolytic activities. Furthermore, considering the isolation source, bacterial strains were examined for haemolytic activity, biofilm formation, cytotoxicity and seed germination assay. In total, 14 potential strains belonging to Pseudomonas, Microbacterium, Arthrobacter, Streptomyces, Glutamicibacter, Rhodococcus, Serratia, Exiguobacterium, and Jeotgalicoccus genera were considered safe for both human handling and plants. The composting process was conducted in modified plastic drums at 10 ± 2 °C for 90 days through two treatments: Treatment 1 (T1) involving HF, non-immobilized biochar and cocopeat, and Treatment 2 (T2) involving HF, consortium-immobilized biochar and cocopeat. The consortium-immobilized biochar (T2) degraded HF within 90 days with hemicellulose and cellulose degradation ratios of 73.9% and 62.4%, respectively (p ≤ 0.05). The compost maturation indices like C/N ratio (16.5 ± 1.85), total nitrogen (2.66 ± 0.07), total phosphate (0.4 ± 0.005), total potassium (1.8 ± 0.05) also improved in T2 treatment (p ≤ 0.05). Additionally, T2 was more effective in achieving safe levels of faecal coliforms (< 1000 MPN g−1) and reducing heavy metal content compared to T1. 16S rRNA amplicon-based analysis demonstrated an enhancement of bacterial community diversity in T2, with the presence of Rhodococcus, Pseudomonas, Arthrobacter, and Streptomyces at the end of the composting period promoting HF degradation. Furthermore, T2-fertilized soil showed a germination index (121 ± 0.4, p ≤ 0.05) and stimulated root, shoot and yield by 110%, 45.2%, and 288%, respectively, in pea (Pisum sativum var. AS-10) compared to T1 (49.6%, 19%, and 5.8%, respectively) (p ≤ 0.05). In conclusion, the developed biochar-based formulation proved effective in degrading HF at low temperatures, mitigating foul odours, reducing heavy metals, and enhancing the agronomic value of the final compost. This study presents a promising approach for the sustainable management of HF that can supplement the non-nutritive soil of high-altitude regions.

喜马拉雅山堆肥厕所(CTs)为将人类粪便(HF)转化为堆肥提供了一个可持续的解决方案,补充了该地区贫瘠的土地。然而,堆肥厕所面临着堆肥过程延迟(6-8 个月)、重金属含量增加和恶臭等挑战。因此,本研究评估了在低温条件下(10 ± 2 °C)生物炭掺入的心理滋养菌对高频降解的作用。在从高频堆肥中分离出的 153 种异养细菌中,根据最高水解活性和两种或两种以上水解活性选出了 17 种细菌菌株。此外,考虑到分离来源,还对细菌菌株进行了溶血活性、生物膜形成、细胞毒性和种子萌发试验。共有 14 种潜在菌株被认为对人类和植物都是安全的,它们分别属于假单胞菌属、微小杆菌属、节杆菌属、链霉菌属、谷氨酸杆菌属、红球菌属、沙雷氏菌属、Exiguobacterium 和 Jeotgalicoccus 属。堆肥过程在改良塑料桶中进行,温度为 10 ± 2 °C,历时 90 天,分为两种处理:处理 1(T1)包括高频、非固定化生物炭和椰糠,处理 2(T2)包括高频、菌群固定化生物炭和椰糠。菌群固定化生物炭(T2)在 90 天内降解了高频,半纤维素和纤维素降解率分别为 73.9% 和 62.4%(p ≤ 0.05)。堆肥成熟指数,如 C/N 比(16.5 ± 1.85)、总氮(2.66 ± 0.07)、总磷(0.4 ± 0.005)、总钾(1.8 ± 0.05)也在 T2 处理中得到改善(p ≤ 0.05)。此外,与 T1 相比,T2 能更有效地达到粪大肠菌群的安全水平(< 1000 MPN g-1)并降低重金属含量。基于 16S rRNA 扩增子的分析表明,T2 中的细菌群落多样性有所提高,在堆肥期结束时,Rhodococcus、Pseudomonas、Arthrobacter 和 Streptomyces 的存在促进了高频降解。此外,与 T1(分别为 49.6%、19% 和 5.8%)相比(p ≤ 0.05),T2-施肥土壤对豌豆(Pisum sativum var. AS-10)的发芽指数(121 ± 0.4,p ≤ 0.05)和根、芽和产量的刺激分别为 110%、45.2% 和 288%。总之,所开发的基于生物炭的配方在低温下降解 HF、减轻恶臭、减少重金属和提高最终堆肥的农艺价值方面证明是有效的。这项研究为高海拔地区可持续管理高氟酸提供了一种很有前景的方法,可以补充高海拔地区无营养的土壤。
{"title":"Nutrient recycling of source-separated human faeces using biochar immobilized indigenous psychrotrophic bacteria for sustaining the agroecosystems of north-western Himalaya","authors":"Shruti Sinai Borker,&nbsp;Aman Thakur,&nbsp;Krishna Kanta Pandey,&nbsp;Pallavi Sharma,&nbsp;Vivek Manyapu,&nbsp;Abhishek Khatri,&nbsp;Rakshak Kumar","doi":"10.1186/s13765-024-00887-6","DOIUrl":"10.1186/s13765-024-00887-6","url":null,"abstract":"<div><p>The Himalayan composting toilets (CTs) offer a sustainable solution for converting human faeces (HF) into compost, supplementing the low-fertile land of the region. However, CTs face challenges such as delayed composting processes (6–8 months), increased heavy metal content, and foul odour. Therefore, the current study evaluated biochar-amended psychrotrophic bacteria for HF degradation under low-temperature conditions (10 ± 2 °C). Out of 153 psychrotrophic bacteria isolated from HF compost, 17 bacterial strains were selected based on highest and two or more hydrolytic activities. Furthermore, considering the isolation source, bacterial strains were examined for haemolytic activity, biofilm formation, cytotoxicity and seed germination assay. In total, 14 potential strains belonging to <i>Pseudomonas</i>, <i>Microbacterium</i>, <i>Arthrobacter</i>, <i>Streptomyces</i>, <i>Glutamicibacter</i>, <i>Rhodococcus</i>, <i>Serratia</i>, <i>Exiguobacterium</i>, and <i>Jeotgalicoccus</i> genera were considered safe for both human handling and plants. The composting process was conducted in modified plastic drums at 10 ± 2 °C for 90 days through two treatments: Treatment 1 (T1) involving HF, non-immobilized biochar and cocopeat, and Treatment 2 (T2) involving HF, consortium-immobilized biochar and cocopeat. The consortium-immobilized biochar (T2) degraded HF within 90 days with hemicellulose and cellulose degradation ratios of 73.9% and 62.4%, respectively (p ≤ 0.05). The compost maturation indices like C/N ratio (16.5 ± 1.85), total nitrogen (2.66 ± 0.07), total phosphate (0.4 ± 0.005), total potassium (1.8 ± 0.05) also improved in T2 treatment (p ≤ 0.05). Additionally, T2 was more effective in achieving safe levels of faecal coliforms (&lt; 1000 MPN g<sup>−1</sup>) and reducing heavy metal content compared to T1. 16S rRNA amplicon-based analysis demonstrated an enhancement of bacterial community diversity in T2, with the presence of <i>Rhodococcus</i>, <i>Pseudomonas</i>, <i>Arthrobacter</i>, and <i>Streptomyces</i> at the end of the composting period promoting HF degradation. Furthermore, T2-fertilized soil showed a germination index (121 ± 0.4, p ≤ 0.05) and stimulated root, shoot and yield by 110%, 45.2%, and 288%, respectively, in pea (<i>Pisum sativum</i> var. AS-10) compared to T1 (49.6%, 19%, and 5.8%, respectively) (p ≤ 0.05). In conclusion, the developed biochar-based formulation proved effective in degrading HF at low temperatures, mitigating foul odours, reducing heavy metals, and enhancing the agronomic value of the final compost. This study presents a promising approach for the sustainable management of HF that can supplement the non-nutritive soil of high-altitude regions.</p></div>","PeriodicalId":467,"journal":{"name":"Applied Biological Chemistry","volume":"67 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-03-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://applbiolchem.springeropen.com/counter/pdf/10.1186/s13765-024-00887-6","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140328976","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comparative analysis of anti-obesity effects of green, fermented, and γ-aminobutyric acid teas in a high-fat diet-induced mouse model 绿茶、发酵茶和γ-氨基丁酸茶对高脂饮食诱导小鼠模型抗肥胖作用的比较分析
IF 3.2 3区 农林科学 Q3 FOOD SCIENCE & TECHNOLOGY Pub Date : 2024-03-26 DOI: 10.1186/s13765-024-00888-5
Seung-Jun Lee, Kyoung Hwan Cho, Jong Cheol Kim, Ho Jin Choo, Jeong-Yun Hwang, Hyun Chin Cho, Young-Sool Hah

Obesity, a prevalent disease associated with numerous chronic conditions, including hyperlipidemia, hyperglycemia, diabetes, and metabolic syndrome, remains a major global health challenge. This study investigated the potential of green tea (GT), fermented tea (FT), and γ-aminobutyric acid (GABA) tea (GBT), which are rich in phytonutrients and polyphenols, for the management of obesity. Using a high-fat diet-induced obese mouse model (C57BL/6N), we explored the effect of these teas on various obesity-related parameters. The mice were categorized into five groups: normal diet with water, high-fat diet with water, and high-fat diet supplemented with GT, FT, or GBT. Over 13 weeks, we monitored body weight, perirenal and liver fat, adipocyte lipid accumulation, and key metabolic indicators, such as serum cholesterol, leptin, insulin, and fasting blood glucose. These teas contain beneficial phytochemicals such as GABA, theanine, and caffeine, and have demonstrated an enhanced antioxidant capacity, which increases the scavenging of free radicals and may reduce oxidative stress. The animal study indicated a decrease in feeding efficiency and significant reductions in body weight liver fat, epididymal fat, and perirenal fat, as well as in adipocyte lipid accumulation. Additionally, notable improvements were observed in metabolic health indicators, including reductions in serum cholesterol, leptin, insulin, and fasting blood glucose levels. Our findings revealed that GT, FT, or GBT significantly counteracted the negative effects of a high-fat diet, suggesting their potential in combating obesity and related metabolic disorders.

肥胖症是一种与多种慢性疾病(包括高脂血症、高血糖、糖尿病和代谢综合征)相关的流行病,仍然是全球面临的一项重大健康挑战。本研究调查了富含植物营养素和茶多酚的绿茶(GT)、发酵茶(FT)和γ-氨基丁酸(GABA)茶(GBT)治疗肥胖症的潜力。我们利用高脂饮食诱导的肥胖小鼠模型(C57BL/6N),探讨了这些茶对各种肥胖相关指标的影响。小鼠被分为五组:正常饮食加水组、高脂饮食加水组、高脂饮食添加 GT、FT 或 GBT 组。在 13 周的时间里,我们监测了体重、肾周脂肪和肝脏脂肪、脂肪细胞脂质积累以及血清胆固醇、瘦素、胰岛素和空腹血糖等主要代谢指标。这些茶叶中含有 GABA、茶氨酸和咖啡因等有益的植物化学物质,并显示出更强的抗氧化能力,从而提高了清除自由基的能力,并可减少氧化应激。动物研究表明,喂养效率下降,体重肝脏脂肪、附睾脂肪和肾周脂肪以及脂肪细胞脂质积累显著减少。此外,代谢健康指标也有明显改善,包括血清胆固醇、瘦素、胰岛素和空腹血糖水平的降低。我们的研究结果表明,GT、FT 或 GBT 能明显抵消高脂饮食的负面影响,这表明它们在对抗肥胖和相关代谢紊乱方面具有潜力。
{"title":"Comparative analysis of anti-obesity effects of green, fermented, and γ-aminobutyric acid teas in a high-fat diet-induced mouse model","authors":"Seung-Jun Lee,&nbsp;Kyoung Hwan Cho,&nbsp;Jong Cheol Kim,&nbsp;Ho Jin Choo,&nbsp;Jeong-Yun Hwang,&nbsp;Hyun Chin Cho,&nbsp;Young-Sool Hah","doi":"10.1186/s13765-024-00888-5","DOIUrl":"10.1186/s13765-024-00888-5","url":null,"abstract":"<div><p>Obesity, a prevalent disease associated with numerous chronic conditions, including hyperlipidemia, hyperglycemia, diabetes, and metabolic syndrome, remains a major global health challenge. This study investigated the potential of green tea (GT), fermented tea (FT), and γ-aminobutyric acid (GABA) tea (GBT), which are rich in phytonutrients and polyphenols, for the management of obesity. Using a high-fat diet-induced obese mouse model (C57BL/6N), we explored the effect of these teas on various obesity-related parameters. The mice were categorized into five groups: normal diet with water, high-fat diet with water, and high-fat diet supplemented with GT, FT, or GBT. Over 13 weeks, we monitored body weight, perirenal and liver fat, adipocyte lipid accumulation, and key metabolic indicators, such as serum cholesterol, leptin, insulin, and fasting blood glucose. These teas contain beneficial phytochemicals such as GABA, theanine, and caffeine, and have demonstrated an enhanced antioxidant capacity, which increases the scavenging of free radicals and may reduce oxidative stress. The animal study indicated a decrease in feeding efficiency and significant reductions in body weight liver fat, epididymal fat, and perirenal fat, as well as in adipocyte lipid accumulation. Additionally, notable improvements were observed in metabolic health indicators, including reductions in serum cholesterol, leptin, insulin, and fasting blood glucose levels. Our findings revealed that GT, FT, or GBT significantly counteracted the negative effects of a high-fat diet, suggesting their potential in combating obesity and related metabolic disorders.</p></div>","PeriodicalId":467,"journal":{"name":"Applied Biological Chemistry","volume":"67 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-03-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://applbiolchem.springeropen.com/counter/pdf/10.1186/s13765-024-00888-5","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140297156","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Murraya koenigii (L.) Sprengel seeds and pericarps in relation to their chemical profiles: new approach for multidrug resistant Acinetobacter baumannii ventilator-associated pneumonia Murraya koenigii (L.) Sprengel 种子和果皮的化学成分:治疗耐多药鲍曼不动杆菌呼吸机相关肺炎的新方法
IF 3.2 3区 农林科学 Q3 FOOD SCIENCE & TECHNOLOGY Pub Date : 2024-03-25 DOI: 10.1186/s13765-024-00886-7
Riham A. El-Shiekh, Rana Elshimy, Asmaa A. Mandour, Hanaa A. H. Kassem, Amal E. Khaleel, Saleh Alseekh, Alisdair R. Fernie, Mohamed A. Salem

Acinetobacter baumannii is without a doubt one of the most problematic bacteria causing hospital-acquired nosocomial infections in today's healthcare system. To solve the high prevalence of multi-drug resistant (MDR) in A. baumannii, we investigated one of the medicinal plants traditionally used as antibacterial agent; namely Murraya koenigii (L.) Sprengel. The total methanolic extracts of seeds and pericarps were prepared and their anti-bacterial activity was assessed using the agar diffusion method and minimum inhibitory concentration (MIC) was then calculated as compared to tigecycline. Then, an in-vivo murine model was established which confirmed the promising activity of M. koenigii seeds in demonstrating anti-bacterial and anti-inflammatory actions. The histopathological study of lungs, scoring of pulmonary lesions, counting of bacterial loads after infection by multi-drug resistant A. baumannii all provided evidence to support these findings. LC–MS/MS profiling coupled to molecular networking and chemometrics detected the presence of carbazole alkaloids, and coumarins as dominate metabolites of the active seed extracts. Positively correlated metabolites to antibacterial potential were 6-(2ʹ,3ʹ-dihydroxy-3-methylbutyl)-8-prenylumbelliferone, scopoline, and 5-methoxymurrayatin. An in-silico study was also performed on the crystal structure of MurF from A. baumannii (PDB ID: 4QF5), the studied structures of the mentioned extracts revealed good docking interaction at the active site suggestive of competition with the ATP ligand. These collective findings suggest that extracts of Murraya koenigii (L.) Sprengel seed is a novel prospective for the discovery of drug candidates against infections caused by MDR A. baumannii.

鲍曼不动杆菌(Acinetobacter baumannii)无疑是当今医疗系统中导致医院获得性院内感染的最棘手细菌之一。为了解决鲍曼不动杆菌多重耐药性(MDR)高发的问题,我们研究了一种传统上用作抗菌剂的药用植物,即 Murraya koenigii (L.) Sprengel。我们制备了种子和果皮的甲醇提取物,并使用琼脂扩散法评估了它们的抗菌活性,然后计算了与替加环素相比的最低抑菌浓度(MIC)。然后,建立了一个体内小鼠模型,该模型证实了柯尼希菌种子在抗菌和抗炎方面具有良好的活性。肺部组织病理学研究、肺部病变评分、多重耐药鲍曼尼氏菌感染后的细菌量计算都为这些发现提供了佐证。结合分子网络和化学计量学进行的 LC-MS/MS 分析发现,咔唑生物碱和香豆素是活性种子提取物的主要代谢物。与抗菌潜力呈正相关的代谢物是 6-(2ʹ,3ʹ-二羟基-3-甲基丁基)-8-异戊烯基伞形酮、东莨菪碱和 5-甲氧基糠氨醇。此外,还对鲍曼不动杆菌的 MurF 晶体结构(PDB ID:4QF5)进行了室内研究,所研究的上述提取物结构在活性位点显示出良好的对接相互作用,表明与 ATP 配体存在竞争。这些研究结果表明,墨累亚柯尼希(L. )Sprengel 种子提取物是发现抗 MDR 鲍曼尼氏菌引起的感染的候选药物的新前景。
{"title":"Murraya koenigii (L.) Sprengel seeds and pericarps in relation to their chemical profiles: new approach for multidrug resistant Acinetobacter baumannii ventilator-associated pneumonia","authors":"Riham A. El-Shiekh,&nbsp;Rana Elshimy,&nbsp;Asmaa A. Mandour,&nbsp;Hanaa A. H. Kassem,&nbsp;Amal E. Khaleel,&nbsp;Saleh Alseekh,&nbsp;Alisdair R. Fernie,&nbsp;Mohamed A. Salem","doi":"10.1186/s13765-024-00886-7","DOIUrl":"10.1186/s13765-024-00886-7","url":null,"abstract":"<div><p><i>Acinetobacter</i> <i>baumannii</i> is without a doubt one of the most problematic bacteria causing hospital-acquired nosocomial infections in today's healthcare system. To solve the high prevalence of multi-drug resistant (MDR) in <i>A.</i> <i>baumannii</i>, we investigated one of the medicinal plants traditionally used as antibacterial agent; namely <i>Murraya</i> <i>koenigii</i> (L.) Sprengel. The total methanolic extracts of seeds and pericarps were prepared and their anti-bacterial activity was assessed using the agar diffusion method and minimum inhibitory concentration (MIC) was then calculated as compared to tigecycline. Then, an in-vivo murine model was established which confirmed the promising activity of <i>M.</i> <i>koenigii</i> seeds in demonstrating anti-bacterial and anti-inflammatory actions. The histopathological study of lungs, scoring of pulmonary lesions, counting of bacterial loads after infection by multi-drug resistant <i>A.</i> <i>baumannii</i> all provided evidence to support these findings. LC–MS/MS profiling coupled to molecular networking and chemometrics detected the presence of carbazole alkaloids, and coumarins as dominate metabolites of the active seed extracts. Positively correlated metabolites to antibacterial potential were 6-(2ʹ,3ʹ-dihydroxy-3-methylbutyl)-8-prenylumbelliferone, scopoline, and 5-methoxymurrayatin. An in-silico study was also performed on the crystal structure of MurF from <i>A.</i> <i>baumannii</i> (PDB ID: 4QF5), the studied structures of the mentioned extracts revealed good docking interaction at the active site suggestive of competition with the ATP ligand. These collective findings suggest that extracts of <i>Murraya</i> <i>koenigii</i> (L.) Sprengel seed is a novel prospective for the discovery of drug candidates against infections caused by MDR <i>A.</i> <i>baumannii</i>.</p></div>","PeriodicalId":467,"journal":{"name":"Applied Biological Chemistry","volume":"67 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-03-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://applbiolchem.springeropen.com/counter/pdf/10.1186/s13765-024-00886-7","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140291351","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Development and application of a high-performance liquid chromatography diode-array detection (HPLC–DAD) method for the simultaneous quantification of phenolic compounds in the aerial part of Glehnia littoralis 高效液相色谱二极管阵列检测法(HPLC-DAD)的开发与应用--用于同时定量检测姬松茸气生部分的酚类化合物
IF 3.2 3区 农林科学 Q3 FOOD SCIENCE & TECHNOLOGY Pub Date : 2024-03-22 DOI: 10.1186/s13765-024-00884-9
Yun Ji Park, Yeong Bin Choi, Sang-Bin Oh, Jinyoung Moon, To Quyen Truong, Phuong Kim Huynh, Sang Min Kim

Glehnia littoralis, a medicinal herb employed in traditional practices for alleviating fatigue, cough, and a dry throat, is recognized for its beneficial properties due to a diverse array of active compounds found in its extracts. For example, the G. littoralis roots (Radix Glehniae) mainly contain coumarins and phenolic acids, serving as the primary focus of this study. Despite the widespread use of the tools in various industries and the development of multiple analytical methods for their examination, the edible aerial parts have industrial potential, and there is currently no analytical method available to identify their key components. In this study, a high-performance liquid chromatography method combined with diode array detection (HPLC–DAD) was developed to simultaneously detect 16 phenolic compounds previously reported to be present in the edible aerial parts of G. littoralis. The proposed approach included using gradient elution to change the solvent system from water/acetonitrile to water/methanol. Furthermore, the method validation was conducted, assessing its linearity, limit of detection, limit of quantification, precision, accuracy, and recovery, all of which demonstrated satisfactory results. Subsequently, the developed method was applied to quantify the phenolic compounds in various G. littoralis samples obtained from different organs, solvent extraction processes, and processing methods. Moreover, the online HPLC-ABTS (2,2ʹ-azino-bis(3-ethylbenzthiazoline-6-sulfonic acid) assay was used to evaluate the antioxidant capacities of individual constituents, identifying four important antioxidants and estimate the overall antioxidant capacity of the G. littoralis extract.

水飞蓟是一种传统草药,可用于缓解疲劳、咳嗽和咽喉干痛,由于其提取物中含有多种活性化合物,其有益特性已得到公认。例如,G. littoralis 根(Radix Glehniae)主要含有香豆素和酚酸,是本研究的重点。尽管这些工具被广泛应用于各行各业,并开发了多种分析方法对其进行检测,但可食用的气生部分仍具有工业潜力,目前尚无分析方法来鉴定其主要成分。本研究开发了一种结合二极管阵列检测(HPLC-DAD)的高效液相色谱法,可同时检测之前报道的海胆可食部分中的 16 种酚类化合物。所提议的方法包括使用梯度洗脱,将溶剂系统从水/乙腈改为水/甲醇。此外,还进行了方法验证,评估了其线性、检出限、定量限、精密度、准确度和回收率,结果均令人满意。随后,应用所建立的方法对不同器官、不同溶剂萃取工艺和不同加工方法获得的各种海胆样品中的酚类化合物进行了定量分析。此外,还采用在线 HPLC-ABTS(2,2ʹ-氮杂双(3-乙基苯并噻唑啉-6-磺酸)测定法评估了单个成分的抗氧化能力,确定了四种重要的抗氧化剂,并估算了岩白菜素提取物的总体抗氧化能力。
{"title":"Development and application of a high-performance liquid chromatography diode-array detection (HPLC–DAD) method for the simultaneous quantification of phenolic compounds in the aerial part of Glehnia littoralis","authors":"Yun Ji Park,&nbsp;Yeong Bin Choi,&nbsp;Sang-Bin Oh,&nbsp;Jinyoung Moon,&nbsp;To Quyen Truong,&nbsp;Phuong Kim Huynh,&nbsp;Sang Min Kim","doi":"10.1186/s13765-024-00884-9","DOIUrl":"10.1186/s13765-024-00884-9","url":null,"abstract":"<div><p><i>Glehnia littoralis</i>, a medicinal herb employed in traditional practices for alleviating fatigue, cough, and a dry throat, is recognized for its beneficial properties due to a diverse array of active compounds found in its extracts. For example, the <i>G. littoralis</i> roots (Radix Glehniae) mainly contain coumarins and phenolic acids, serving as the primary focus of this study. Despite the widespread use of the tools in various industries and the development of multiple analytical methods for their examination, the edible aerial parts have industrial potential, and there is currently no analytical method available to identify their key components. In this study, a high-performance liquid chromatography method combined with diode array detection (HPLC–DAD) was developed to simultaneously detect 16 phenolic compounds previously reported to be present in the edible aerial parts of <i>G. littoralis</i>. The proposed approach included using gradient elution to change the solvent system from water/acetonitrile to water/methanol. Furthermore, the method validation was conducted, assessing its linearity, limit of detection, limit of quantification, precision, accuracy, and recovery, all of which demonstrated satisfactory results. Subsequently, the developed method was applied to quantify the phenolic compounds in various <i>G. littoralis</i> samples obtained from different organs, solvent extraction processes, and processing methods. Moreover, the online HPLC-ABTS (2,2ʹ-azino-bis(3-ethylbenzthiazoline-6-sulfonic acid) assay was used to evaluate the antioxidant capacities of individual constituents, identifying four important antioxidants and estimate the overall antioxidant capacity of the <i>G. littoralis</i> extract.</p></div>","PeriodicalId":467,"journal":{"name":"Applied Biological Chemistry","volume":"67 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-03-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://applbiolchem.springeropen.com/counter/pdf/10.1186/s13765-024-00884-9","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140188472","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Correlation analysis between artemisinin and its derivative contents and trichome characteristics from different Artemisia species 不同青蒿品种的青蒿素及其衍生物含量与毛状体特征之间的相关性分析
IF 3.2 3区 农林科学 Q3 FOOD SCIENCE & TECHNOLOGY Pub Date : 2024-03-21 DOI: 10.1186/s13765-024-00883-w
Yun Ji Park, To Quyen Truong, Yeong Bin Choi, Phuong Kim Huynh, Jinyoung Moon, Song Yi Koo, Hyoung Seok Kim, Sang Min Kim

Artemisia species have significant commercial, medical, and economic value and are widely used in the traditional medicine and pharmaceutical industries. Artemisinin, a powerful antimalarial agent, is an important pharmaceutical metabolite that primarily accumulates within the glandular trichomes (GTs) on the leaf surface of Artemisia plants. Trichomes arising from the elongation of epidermal cells can be classified into GTs and non-glandular trichomes (NGTs) based on their morphology. GTs and NGTs are present in Artemisia species, and the relationship between GTs and artemisinin has been extensively studied; however, the correlation between NGTs and artemisinin remains relatively unexplored. In this study, we inferred artemisinin derivatives and trichome characteristics based on the type of species, developmental stage, and leaf age and conducted correlation analyses to investigate the factors influencing artemisinin content across different Artemisia species. Artemisinin and its derivatives exhibited variations in distribution based on species and leaf age, with a decreasing trend observed across most species as the developmental stage progressed. Noticeable differences among Artemisia species were observed in leaf shape, morphology, and trichome distribution. Although the observed data did not evidently differentiate between species, developmental stage, and leaf age groups, principal component analysis revealed that artemisinin was positively associated with the NGTs density, indicating a correlation coefficient of 0.56 (p < 0.0001). Therefore, the number of NGTs may affect the artemisinin content in different Artemisia species.

青蒿物种具有重要的商业、医疗和经济价值,被广泛应用于传统医学和制药业。青蒿素是一种强效抗疟药物,是一种重要的药物代谢产物,主要积聚在青蒿植物叶片表面的腺毛(GTs)中。由表皮细胞伸长产生的毛状体可根据其形态分为腺毛状体(GTs)和非腺毛状体(NGTs)。青蒿物种中存在GTs和NGTs,GTs与青蒿素之间的关系已被广泛研究;然而,NGTs与青蒿素之间的相关性仍相对较少。在本研究中,我们根据物种类型、发育阶段和叶龄推断了青蒿素衍生物和毛状体特征,并进行了相关性分析,以研究影响不同青蒿物种青蒿素含量的因素。青蒿素及其衍生物的分布因物种和叶龄而异,大多数物种的青蒿素含量随着发育阶段的进展呈下降趋势。不同种类的青蒿在叶形、形态和毛状体分布方面存在明显差异。虽然观察到的数据没有明显区分物种、发育阶段和叶龄组,但主成分分析显示青蒿素与 NGTs 密度呈正相关,相关系数为 0.56(p < 0.0001)。因此,NGTs 的数量可能会影响不同青蒿品种的青蒿素含量。
{"title":"Correlation analysis between artemisinin and its derivative contents and trichome characteristics from different Artemisia species","authors":"Yun Ji Park,&nbsp;To Quyen Truong,&nbsp;Yeong Bin Choi,&nbsp;Phuong Kim Huynh,&nbsp;Jinyoung Moon,&nbsp;Song Yi Koo,&nbsp;Hyoung Seok Kim,&nbsp;Sang Min Kim","doi":"10.1186/s13765-024-00883-w","DOIUrl":"10.1186/s13765-024-00883-w","url":null,"abstract":"<div><p><i>Artemisia</i> species have significant commercial, medical, and economic value and are widely used in the traditional medicine and pharmaceutical industries. Artemisinin, a powerful antimalarial agent, is an important pharmaceutical metabolite that primarily accumulates within the glandular trichomes (GTs) on the leaf surface of <i>Artemisia</i> plants. Trichomes arising from the elongation of epidermal cells can be classified into GTs and non-glandular trichomes (NGTs) based on their morphology. GTs and NGTs are present in <i>Artemisia</i> species, and the relationship between GTs and artemisinin has been extensively studied; however, the correlation between NGTs and artemisinin remains relatively unexplored. In this study, we inferred artemisinin derivatives and trichome characteristics based on the type of species, developmental stage, and leaf age and conducted correlation analyses to investigate the factors influencing artemisinin content across different <i>Artemisia</i> species. Artemisinin and its derivatives exhibited variations in distribution based on species and leaf age, with a decreasing trend observed across most species as the developmental stage progressed. Noticeable differences among <i>Artemisia</i> species were observed in leaf shape, morphology, and trichome distribution. Although the observed data did not evidently differentiate between species, developmental stage, and leaf age groups, principal component analysis revealed that artemisinin was positively associated with the NGTs density, indicating a correlation coefficient of 0.56 (<i>p</i> &lt; 0.0001). Therefore, the number of NGTs may affect the artemisinin content in different <i>Artemisia</i> species.</p></div>","PeriodicalId":467,"journal":{"name":"Applied Biological Chemistry","volume":"67 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-03-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://applbiolchem.springeropen.com/counter/pdf/10.1186/s13765-024-00883-w","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140188473","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Beneficial effects of cannabidiol from Cannabis 大麻中的大麻二酚的益处
IF 3.2 3区 农林科学 Q3 FOOD SCIENCE & TECHNOLOGY Pub Date : 2024-03-19 DOI: 10.1186/s13765-024-00867-w
Sullim Lee, Yunjeong Lee, Yunseo Kim, Hyunji Kim, Haerim Rhyu, Kyoungmi Yoon, Chang-Dae Lee, Sanghyun Lee

Cannabis, traditionally used for recreation due to psychoactive compounds in its leaves, flowers, and seeds, has not been thoroughly explored for potential therapeutic benefits. Δ9-trans-Tetrahydrocannabinol, a key cannabinoid in cannabis, causes hallucinogenic effects and delirium symptoms. In contrast, cannabidiol (CBD) does not induce hallucinations and has shown effectiveness in treating symptoms of various rare, incurable diseases. Cannabis exhibits neuroprotective, anti-inflammatory, anti-thrombotic, anti-bacterial, analgesic, and antiepileptic properties, recently attracting more attention. This review aims to summarize comprehensively the impact of cannabis on human health, focusing on endocannabinoids and their receptors. It also delves into recent CBD research advancements, highlighting the compound’s potential medical applications. Overall, this paper provides valuable insights into the prospective development of medical cannabis, with a particular emphasis on CBD.

由于大麻叶、花和种子中含有精神活性化合物,大麻传统上被用于娱乐,但其潜在的治疗功效尚未得到深入研究。Δ9-反式四氢大麻酚是大麻中的一种主要大麻素,会产生致幻效果和谵妄症状。相比之下,大麻二酚(CBD)不会引起幻觉,而且在治疗各种罕见、无法治愈的疾病症状方面显示出了疗效。大麻具有神经保护、抗炎、抗血栓、抗菌、镇痛和抗癫痫等特性,最近受到越来越多的关注。本综述旨在全面总结大麻对人类健康的影响,重点关注内源性大麻素及其受体。它还深入探讨了 CBD 的最新研究进展,强调了该化合物的潜在医疗应用。总之,本文为医用大麻的发展前景提供了宝贵的见解,并特别强调了 CBD。
{"title":"Beneficial effects of cannabidiol from Cannabis","authors":"Sullim Lee,&nbsp;Yunjeong Lee,&nbsp;Yunseo Kim,&nbsp;Hyunji Kim,&nbsp;Haerim Rhyu,&nbsp;Kyoungmi Yoon,&nbsp;Chang-Dae Lee,&nbsp;Sanghyun Lee","doi":"10.1186/s13765-024-00867-w","DOIUrl":"10.1186/s13765-024-00867-w","url":null,"abstract":"<div><p>Cannabis, traditionally used for recreation due to psychoactive compounds in its leaves, flowers, and seeds, has not been thoroughly explored for potential therapeutic benefits. Δ9-<i>trans</i>-Tetrahydrocannabinol, a key cannabinoid in cannabis, causes hallucinogenic effects and delirium symptoms. In contrast, cannabidiol (CBD) does not induce hallucinations and has shown effectiveness in treating symptoms of various rare, incurable diseases. Cannabis exhibits neuroprotective, anti-inflammatory, anti-thrombotic, anti-bacterial, analgesic, and antiepileptic properties, recently attracting more attention. This review aims to summarize comprehensively the impact of cannabis on human health, focusing on endocannabinoids and their receptors. It also delves into recent CBD research advancements, highlighting the compound’s potential medical applications. Overall, this paper provides valuable insights into the prospective development of medical cannabis, with a particular emphasis on CBD.</p></div>","PeriodicalId":467,"journal":{"name":"Applied Biological Chemistry","volume":"67 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-03-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://applbiolchem.springeropen.com/counter/pdf/10.1186/s13765-024-00867-w","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140164222","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Acetyl genistin modulates myotube differentiation and attenuates dexamethasone-induced muscle atrophy through the FoxO1/3 signaling pathway in C2C12 myotubes 乙酰基染料木苷通过 FoxO1/3 信号通路调节 C2C12 肌细胞中肌管的分化并减轻地塞米松诱导的肌肉萎缩
IF 3.2 3区 农林科学 Q3 FOOD SCIENCE & TECHNOLOGY Pub Date : 2024-03-19 DOI: 10.1186/s13765-024-00885-8
Won Min Jeong, Seung-Jin Kwag, Jun Young Ha, Seung-Jun Lee, Yeong-In Choe, Dong Yeol Lee, Dong Kyu Jeong, Hwan Hee Bae, Jin-Hee Seo, Young-Sool Hah, Sang Gon Kim

Muscle atrophy, a debilitating condition characterized by loss of muscle mass and strength, is a major concern in various clinical settings. Acetyl genistin (AG), a bioactive compound, was evaluated for its role in muscle cell differentiation and its potential protective effects against dexamethasone (dexa)-induced muscle atrophy. Our study demonstrated that AG significantly promoted C2C12 myotube differentiation, as evidenced by enhanced myotube width and increased fusion index. Notably, AG treatment upregulated the expression of myogenic markers, including MHC, MyoD, and MyoG. Moreover, AG displayed protective properties by attenuating dexa-induced muscle atrophy, mainly by suppressing the expression of the atrophy-related genes MAFbx and MuRF1. AG's protective effects are mechanistically attributed to its regulation of the AMPK/FoxO-dependent signaling pathway. Our results highlighted the dual benefits of AG in fostering muscle differentiation and safeguarding against muscle atrophy, positioning it as a promising agent for muscle health and therapeutic applications.

肌肉萎缩是一种以肌肉质量和力量下降为特征的衰弱病症,是各种临床环境中的一个主要问题。我们评估了生物活性化合物乙酰基染料木素(AG)在肌肉细胞分化中的作用及其对地塞米松(dexa)诱导的肌肉萎缩的潜在保护作用。我们的研究表明,AG 能明显促进 C2C12 肌细胞管的分化,肌细胞管宽度的增加和融合指数的提高就是证明。值得注意的是,AG 处理可上调肌生成标志物的表达,包括 MHC、MyoD 和 MyoG。此外,AG 主要通过抑制肌肉萎缩相关基因 MAFbx 和 MuRF1 的表达,减轻了右旋糖诱导的肌肉萎缩,从而显示出保护作用。从机理上讲,AG的保护作用可归因于其对AMPK/FoxO依赖性信号通路的调节。我们的研究结果突显了AG在促进肌肉分化和防止肌肉萎缩方面的双重功效,使其成为肌肉保健和治疗应用的一种有前途的药物。
{"title":"Acetyl genistin modulates myotube differentiation and attenuates dexamethasone-induced muscle atrophy through the FoxO1/3 signaling pathway in C2C12 myotubes","authors":"Won Min Jeong,&nbsp;Seung-Jin Kwag,&nbsp;Jun Young Ha,&nbsp;Seung-Jun Lee,&nbsp;Yeong-In Choe,&nbsp;Dong Yeol Lee,&nbsp;Dong Kyu Jeong,&nbsp;Hwan Hee Bae,&nbsp;Jin-Hee Seo,&nbsp;Young-Sool Hah,&nbsp;Sang Gon Kim","doi":"10.1186/s13765-024-00885-8","DOIUrl":"10.1186/s13765-024-00885-8","url":null,"abstract":"<div><p>Muscle atrophy, a debilitating condition characterized by loss of muscle mass and strength, is a major concern in various clinical settings. Acetyl genistin (AG), a bioactive compound, was evaluated for its role in muscle cell differentiation and its potential protective effects against dexamethasone (dexa)-induced muscle atrophy. Our study demonstrated that AG significantly promoted C2C12 myotube differentiation, as evidenced by enhanced myotube width and increased fusion index. Notably, AG treatment upregulated the expression of myogenic markers, including MHC, MyoD, and MyoG. Moreover, AG displayed protective properties by attenuating dexa-induced muscle atrophy, mainly by suppressing the expression of the atrophy-related genes MAFbx and MuRF1. AG's protective effects are mechanistically attributed to its regulation of the AMPK/FoxO-dependent signaling pathway. Our results highlighted the dual benefits of AG in fostering muscle differentiation and safeguarding against muscle atrophy, positioning it as a promising agent for muscle health and therapeutic applications.</p></div>","PeriodicalId":467,"journal":{"name":"Applied Biological Chemistry","volume":"67 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-03-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://applbiolchem.springeropen.com/counter/pdf/10.1186/s13765-024-00885-8","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140161317","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Classification of soybeans from different habitats based on metabolomic–transcriptomic integration 基于代谢组-转录组整合的不同生境大豆分类
IF 3.2 3区 农林科学 Q3 FOOD SCIENCE & TECHNOLOGY Pub Date : 2024-03-16 DOI: 10.1186/s13765-024-00882-x
Jinghui Wang, Qiyou Zheng, Chenxu Wang, Ao Zhou

Soybeans are a significant agricultural product in China, with certain geographical locations often yielding higher quality, and thus more expensive, soybean crops. In this study, metabolomics and transcriptomics analyses were conducted on soybean samples from nine regions in Heilongjiang and Liaoning Provinces using untargeted liquid chromatography–mass spectrometry (LC–MS) and Illumina sequencing technologies. The primary objective was to devise an effective and unbiased method for determining the geographical origin of each soybean variety to mitigate potential fraudulent practices. Through multidimensional and unidimensional analyses, successful identification of differentially expressed metabolites (DEMs) and differentially expressed genes (DEGs) was achieved, yielding statistically significant outcomes. Integration of the metabolomics and transcriptomics datasets facilitated the construction of a correlation network model capable of distinguishing soybeans originating from different geographical locations, leading to the identification of significant biomarkers exemplifying noteworthy distinctions. To validate the feasibility of this method in practical applications, partial least squares discriminant analysis was employed to differentiate soybean samples from the nine regions. The results convincingly showcased the applicability and reliability of this approach in accurately pinpointing the geographical origin of soybeans. Distinguishing itself from prior research in soybean traceability, this study incorporates an integrated analysis of metabolomics and transcriptomics data, thereby unveiling biomarkers that offer a more precise differentiation of soybean traits across distinct regions, thereby bridging a critical research gap within the soybean traceability domain. This innovative dual-data integration analysis methodology is poised to enhance the accuracy of soybean traceability tools and lay a new foundation for future agricultural product identification research.

大豆是中国的重要农产品,某些地理位置的大豆往往品质更高,因此价格也更贵。本研究采用非靶向液相色谱-质谱(LC-MS)和 Illumina 测序技术,对黑龙江省和辽宁省九个地区的大豆样品进行了代谢组学和转录组学分析。主要目的是设计一种有效且无偏见的方法来确定每个大豆品种的地理来源,以减少潜在的欺诈行为。通过多维和单维分析,成功鉴定了差异表达代谢物(DEMs)和差异表达基因(DEGs),并得出了具有统计学意义的结果。代谢组学和转录组学数据集的整合促进了相关网络模型的构建,该模型能够区分来自不同地理位置的大豆,从而识别出体现显著区别的重要生物标记物。为了验证这种方法在实际应用中的可行性,采用了偏最小二乘判别分析来区分来自九个地区的大豆样本。结果令人信服地证明了这种方法在准确定位大豆地理来源方面的适用性和可靠性。有别于以往的大豆溯源研究,本研究结合了代谢组学和转录组学数据的综合分析,从而揭示了能更精确地区分大豆性状的生物标记物,弥补了大豆溯源领域的关键研究空白。这种创新的双数据整合分析方法有望提高大豆溯源工具的准确性,并为未来的农产品识别研究奠定新的基础。
{"title":"Classification of soybeans from different habitats based on metabolomic–transcriptomic integration","authors":"Jinghui Wang,&nbsp;Qiyou Zheng,&nbsp;Chenxu Wang,&nbsp;Ao Zhou","doi":"10.1186/s13765-024-00882-x","DOIUrl":"10.1186/s13765-024-00882-x","url":null,"abstract":"<div><p>Soybeans are a significant agricultural product in China, with certain geographical locations often yielding higher quality, and thus more expensive, soybean crops. In this study, metabolomics and transcriptomics analyses were conducted on soybean samples from nine regions in Heilongjiang and Liaoning Provinces using untargeted liquid chromatography–mass spectrometry (LC–MS) and Illumina sequencing technologies. The primary objective was to devise an effective and unbiased method for determining the geographical origin of each soybean variety to mitigate potential fraudulent practices. Through multidimensional and unidimensional analyses, successful identification of differentially expressed metabolites (DEMs) and differentially expressed genes (DEGs) was achieved, yielding statistically significant outcomes. Integration of the metabolomics and transcriptomics datasets facilitated the construction of a correlation network model capable of distinguishing soybeans originating from different geographical locations, leading to the identification of significant biomarkers exemplifying noteworthy distinctions. To validate the feasibility of this method in practical applications, partial least squares discriminant analysis was employed to differentiate soybean samples from the nine regions. The results convincingly showcased the applicability and reliability of this approach in accurately pinpointing the geographical origin of soybeans. Distinguishing itself from prior research in soybean traceability, this study incorporates an integrated analysis of metabolomics and transcriptomics data, thereby unveiling biomarkers that offer a more precise differentiation of soybean traits across distinct regions, thereby bridging a critical research gap within the soybean traceability domain. This innovative dual-data integration analysis methodology is poised to enhance the accuracy of soybean traceability tools and lay a new foundation for future agricultural product identification research.</p></div>","PeriodicalId":467,"journal":{"name":"Applied Biological Chemistry","volume":"67 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-03-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://applbiolchem.springeropen.com/counter/pdf/10.1186/s13765-024-00882-x","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140141342","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Bioactive compounds from Withania somnifera dun and their toxicity against some piercing sucking pests 睡茄中的生物活性化合物及其对某些刺吸式害虫的毒性
IF 3.2 3区 农林科学 Q3 FOOD SCIENCE & TECHNOLOGY Pub Date : 2024-03-13 DOI: 10.1186/s13765-024-00880-z
Amany Ragab, Mohamed A. Taher, Helmy H. El-Rafey, Ahmed Ramadan El-Rokh

Piercing sucking pests are destructive to many strategic crops all over the world. Botanical pesticides can be used to control these pests. A new withanolide derivative 3 named sominone A ((20R,22R)-1α,3β,20,27-tetrahydroxywitha-5,24-dienolide) was isolated from the alkaloid fraction of the whole plant of Withania somnifera. In addition, there are three known compounds named withasomine 1, methyl isoferulate 2, and coagulin Q 4 were also isolated. The structures of isolated compounds were identified using different spectroscopic methods such as 1D, 2D NMR, and HRESIMS spectroscopy. The alkaloid fraction and the four isolated compounds were tested for their pesticidal activity against four piercing sucking pests (Aphis craccivora Koch, Bemisia tabaci Gennadius, Nezara viridula Linnaeus, and Tetranychus urticae Koch) that attack many strategic crops under laboratory conditions, along with azadirachtin (Okios 3.2% EC) as a positive control. The results showed that the alkaloid compound (withasomine 1) was the most toxic to A. craccivora, B. tabaci, N. viridula, and T. urticae, with LC50 values of 15.44, 36.61, 85.11, and 128.28 ppm, respectively, compared with the control. Withanolide compounds had moderate effects on all tested pests. Biochemical parameters of six enzymes; α-esterase, β-esterase, chitinase, acetylcholinesterase, glutathione-S-transferase, and peroxidase of A. craccivora were estimated at the LC50 value of the most potent compound, withasomine 1 and the values were 38.83, 72.86, 31.45, 506.4, 2.62, and 251.0, respectively. The results demonstrated that all enzymes activity levels were increased compared with the control except a remarkable inhibition in AChE enzyme level was observed compared with control. Therefore, the alkaloid fraction of W. somnifera is a promising extract that contains many active compounds that can be used as a natural pesticide against many harmful pests in agriculture crops.

Graphical Abstract

刺吸式害虫对世界各地的许多战略作物都具有破坏性。植物杀虫剂可用于控制这些害虫。从睡莲全株生物碱馏分中分离出一种新的睡莲内酯衍生物 3,名为睡莲酮 A((20R,22R)-1α,3β,20,27-四羟基睡莲-5,24-二烯内酯)。此外,还分离出了三种已知化合物,分别名为asomine 1、甲基异铁锈酸 2 和凝血素 Q 4。利用不同的光谱方法,如一维、二维核磁共振和 HRESIMS 光谱,对分离出的化合物进行了结构鉴定。在实验室条件下,测试了生物碱组分和四种分离化合物对四种刺吸式害虫(Aphis craccivora Koch、Bemisia tabaci Gennadius、Nezara viridula Linnaeus 和 Tetranychus urticae Koch)的杀虫活性,这四种害虫侵袭多种战略作物。结果表明,生物碱化合物(withasomine 1)对A. craccivora、B. tabaci、N. viridula和T. urticae的毒性最强,与对照相比,LC50值分别为15.44、36.61、85.11和128.28 ppm。Withanolide 复合物对所有测试害虫都有中等程度的影响。以最强化合物 Withasomine 1 的 LC50 值估算了六种酶的生化参数:α-酯酶、β-酯酶、几丁质酶、乙酰胆碱酯酶、谷胱甘肽-S-转移酶和过氧化物酶,其值分别为 38.83、72.86、31.45、506.4、2.62 和 251.0。结果表明,与对照组相比,除 AChE 酶水平受到明显抑制外,所有酶的活性水平都有所提高。因此,筋骨草的生物碱部分是一种很有前途的提取物,其中含有许多活性化合物,可用作天然杀虫剂来对付农作物中的许多有害害虫。
{"title":"Bioactive compounds from Withania somnifera dun and their toxicity against some piercing sucking pests","authors":"Amany Ragab,&nbsp;Mohamed A. Taher,&nbsp;Helmy H. El-Rafey,&nbsp;Ahmed Ramadan El-Rokh","doi":"10.1186/s13765-024-00880-z","DOIUrl":"10.1186/s13765-024-00880-z","url":null,"abstract":"<div><p>Piercing sucking pests are destructive to many strategic crops all over the world. Botanical pesticides can be used to control these pests. A new withanolide derivative <b>3</b> named sominone A ((20<i>R</i>,22<i>R</i>)-1<i>α</i>,3<i>β</i>,20,27-tetrahydroxywitha-5,24-dienolide) was isolated from the alkaloid fraction of the whole plant of <i>Withania somnifera</i>. In addition, there are three known compounds named withasomine <b>1</b>, methyl isoferulate <b>2</b>, and coagulin Q <b>4</b> were also isolated. The structures of isolated compounds were identified using different spectroscopic methods such as 1D, 2D NMR, and HRESIMS spectroscopy. The alkaloid fraction and the four isolated compounds were tested for their pesticidal activity against four piercing sucking pests (<i>Aphis craccivora</i> Koch, <i>Bemisia tabaci</i> Gennadius, <i>Nezara viridula</i> Linnaeus, and <i>Tetranychus urticae</i> Koch) that attack many strategic crops under laboratory conditions, along with azadirachtin (Okios 3.2% EC) as a positive control. The results showed that the alkaloid compound (withasomine <b>1</b>) was the most toxic to <i>A. craccivora</i>, <i>B. tabaci</i>, <i>N. viridula,</i> and <i>T. urticae,</i> with LC<sub>50</sub> values of 15.44, 36.61, 85.11, and 128.28 ppm, respectively, compared with the control. Withanolide compounds had moderate effects on all tested pests. Biochemical parameters of six enzymes; <i>α</i>-esterase,<i> β</i>-esterase, chitinase, acetylcholinesterase, glutathione-<i>S</i>-transferase, and peroxidase of <i>A. craccivora</i> were estimated at the LC<sub>50</sub> value of the most potent compound, withasomine <b>1</b> and the values were 38.83, 72.86, 31.45, 506.4, 2.62, and 251.0, respectively. The results demonstrated that all enzymes activity levels were increased compared with the control except a remarkable inhibition in AChE enzyme level was observed compared with control. Therefore, the alkaloid fraction of <i>W. somnifera</i> is a promising extract that contains many active compounds that can be used as a natural pesticide against many harmful pests in agriculture crops.</p><h3>Graphical Abstract</h3>\u0000<div><figure><div><div><picture><source><img></source></picture></div></div></figure></div></div>","PeriodicalId":467,"journal":{"name":"Applied Biological Chemistry","volume":"67 1","pages":""},"PeriodicalIF":3.2,"publicationDate":"2024-03-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://applbiolchem.springeropen.com/counter/pdf/10.1186/s13765-024-00880-z","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140123606","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Applied Biological Chemistry
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1