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Inhaled Bacteriophage Therapy for Multi-Drug Resistant Achromobacter. 吸入噬菌体治疗多重耐药无色杆菌。
IF 2.7 3区 工程技术 Q1 Medicine Pub Date : 2022-12-01
Franziska Winzig, Shiv Gandhi, Alina Lee, Silvia Würstle, Gail L Stanley, Isabella Capuano, Isabel Neuringer, Jonathan L Koff, Paul E Turner, Benjamin K Chan

The rise of antimicrobial resistant (AMR) bacteria is a global public health threat. AMR Achromobacter bacteria pose a challenging clinical problem, particularly for those with cystic fibrosis (CF) who are predisposed to chronic bacterial lung infections. Lytic bacteriophages (phages) offer a potential alternative to treat AMR infections, with the possible benefit that phage selection for resistance in target bacteria might coincide with reduced pathogenicity. The result is a genetic "trade-off," such as increased sensitivity to chemical antibiotics, and/or decreased virulence of surviving bacteria that are phage resistant. Here, we show that two newly discovered lytic phages against Achromobacter were associated with stabilization of respiratory status when deployed to treat a chronic pulmonary infection in a CF patient using inhaled (nebulized) phage therapy. The two phages demonstrate traits that could be generally useful in their development as therapeutics, especially the possibility that the phages can select for clinically useful trade-offs if bacteria evolve phage resistance following therapy. We discuss the limitations of the current study and suggest further work that should explore whether the phages could be generally useful in targeting pulmonary or other Achromobacter infections in CF patients.

抗微生物药物耐药性(AMR)细菌的增加对全球公共卫生构成威胁。AMR无色杆菌构成了一个具有挑战性的临床问题,特别是对于那些易患慢性细菌性肺部感染的囊性纤维化(CF)患者。裂解噬菌体(噬菌体)提供了一种治疗抗菌素耐药性感染的潜在替代方案,其可能的好处是,在目标细菌中选择耐药的噬菌体可能与降低致病性相一致。结果是一种遗传“权衡”,例如对化学抗生素的敏感性增加,和/或对噬菌体耐药的存活细菌的毒力降低。在这里,我们表明,当使用吸入(雾化)噬菌体治疗CF患者的慢性肺部感染时,两种新发现的抗无色杆菌的裂解噬菌体与呼吸状态的稳定有关。这两种噬菌体表现出的特性可能在它们作为治疗药物的发展中普遍有用,特别是如果细菌在治疗后进化出噬菌体耐药性,噬菌体可以选择临床上有用的权衡。我们讨论了当前研究的局限性,并建议进一步的工作应该探索噬菌体是否可以普遍用于CF患者的肺部或其他无色杆菌感染。
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引用次数: 0
Know your Microbe Foes: The Role of Surveillance in Combatting Antimicrobial Resistance. 了解你的微生物敌人:监测在对抗抗菌素耐药性中的作用。
IF 2.7 3区 工程技术 Q1 Medicine Pub Date : 2022-12-01
Rachel E Bosserman, Jennie H Kwon

Antibiotic-resistant organisms (AROs) are difficult and costly to treat, associated with high mortality rates, and are on the rise. In the United States, there is limited tracking of AROs, which can contribute to transmission and inhibit infection prevention interventions. Surveillance is limited by a lack of standardized methods for colonization screening and limited communication regarding patient ARO-status between healthcare settings. Some regional surveillance and reporting efforts are in place for extensively-resistant AROs such as carbapenem-resistant Enterobacterales (CRE), but need to be further expanded nationwide and to include other AROs such as extended-spectrum β-lactamase (ESBL) producing organisms. Increased surveillance of ARO infections and colonization will inform future targeted intervention and infection prevention strategies.

抗生素耐药生物(AROs)治疗困难且费用高昂,与高死亡率有关,并且呈上升趋势。在美国,对AROs的追踪有限,这可能有助于传播并抑制感染预防干预。由于缺乏标准化的定植筛查方法和医疗机构之间关于患者aro状态的有限沟通,监测受到限制。对碳青霉烯类耐药肠杆菌(CRE)等广泛耐药AROs已经开展了一些区域监测和报告工作,但需要进一步扩大到全国范围,并包括其他AROs,如广谱β-内酰胺酶(ESBL)产生生物。加强对ARO感染和定植的监测将为未来有针对性的干预和感染预防战略提供信息。
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引用次数: 0
The Intriguing Carbapenemases of Pseudomonas aeruginosa: Current Status, Genetic Profile, and Global Epidemiology. 铜绿假单胞菌的碳青霉烯酶:现状、遗传特征和全球流行病学。
IF 2.7 3区 工程技术 Q1 Medicine Pub Date : 2022-12-01
Dalal Hammoudi Halat, Carole Ayoub Moubareck

Worldwide, Pseudomonas aeruginosa remains a leading nosocomial pathogen that is difficult to treat and constitutes a challenging menace to healthcare systems. P. aeruginosa shows increased and alarming resistance to carbapenems, long acknowledged as last-resort antibiotics for treatment of resistant infections. Varied and recalcitrant pathways of resistance to carbapenems can simultaneously occur in P. aeruginosa, including the production of carbapenemases, broadest spectrum types of β-lactamases that hydrolyze virtually almost all β-lactams, including carbapenems. The organism can produce chromosomal, plasmid-encoded, and integron- or transposon-mediated carbapenemases from different molecular classes. These include Ambler class A (KPC and some types of GES enzymes), class B (different metallo-β-lactamases such as IMP, VIM, and NDM), and class D (oxacillinases with carbapenem-hydrolyzing capacity like OXA-198) enzymes. Additionally, derepression of chromosomal AmpC cephalosporinases in P. aeruginosa contributes to carbapenem resistance in the presence of other concomitant mechanisms such as impermeability or efflux overexpression. Epidemiologic and molecular evidence of carbapenemases in P. aeruginosa has been long accumulating, and reports of their existence in different geographical areas of the world currently exist. Such reports are continuously being updated and reveal emerging varieties of carbapenemases and/or new genetic environments. This review summarizes carbapenemases of importance in P. aeruginosa, highlights their genetic profile, and presents current knowledge about their global epidemiology.

在世界范围内,铜绿假单胞菌仍然是一种难以治疗的主要医院病原体,对卫生保健系统构成了具有挑战性的威胁。铜绿假单胞菌对碳青霉烯类抗生素的耐药性增强且令人震惊,碳青霉烯类抗生素长期以来被认为是治疗耐药感染的最后手段。P. aeruginosa对碳青霉烯类的多种抗性途径可以同时发生,包括碳青霉烯酶的产生,这是最广泛的β-内酰胺酶类型,几乎可以水解所有β-内酰胺类,包括碳青霉烯类。生物体可以产生来自不同分子类别的染色体、质粒编码和整合子或转座子介导的碳青霉烯酶。这些包括Ambler A类(KPC和某些类型的GES酶),B类(不同的金属β-内酰胺酶,如IMP, VIM和NDM)和D类(具有碳青霉烯水解能力的OXA-198酶)酶。此外,铜绿假单胞菌染色体AmpC头孢菌素酶的抑制有助于碳青霉烯耐药,存在其他伴随机制,如不渗透性或外排过表达。铜绿假单胞菌中碳青霉烯酶的流行病学和分子证据已经积累了很长时间,目前在世界不同地理区域都有它们存在的报道。这些报告不断更新,揭示了碳青霉烯酶的新品种和/或新的遗传环境。本文综述了碳青霉烯酶在铜绿假单胞菌中的重要性,强调了它们的遗传谱,并介绍了它们的全球流行病学的最新知识。
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引用次数: 0
Antimicrobial Peptides Therapy: An Emerging Alternative for Treating Drug-Resistant Bacteria. 抗菌肽疗法:治疗耐药细菌的新选择。
IF 2.7 3区 工程技术 Q1 Medicine Pub Date : 2022-12-01
Ifeanyi Elibe Mba, Emeka Innocent Nweze

Microbial resistance to antibiotics is an ancient and dynamic issue that has brought a situation reminiscent of the pre-antibiotic era to the limelight. Currently, antibiotic resistance and the associated infections are widespread and pose significant global health and economic burden. Thus, the misuse of antibiotics, which has increased resistance, has necessitated the search for alternative therapeutic agents for combating resistant pathogens. Antimicrobial peptides (AMPs) hold promise as a viable therapeutic approach against drug-resistant pathogens. AMPs are oligopeptides with low molecular weight. They have broad-spectrum antimicrobial activities against pathogenic microorganisms. AMPs are nonspecific and target components of microbes that facilitate immune response by acting as the first-line defense mechanisms against invading pathogenic microbes. The diversity and potency of AMPs make them good candidates for alternative use. They could be used alone or in combination with several other biomaterials for improved therapeutic activity. They can also be employed in vaccine production targeting drug-resistant pathogens. This review covers the opportunities and advances in AMP discovery and development targeting antimicrobial resistance (AMR) bacteria. Briefly, it presents an overview of the global burden of the antimicrobial resistance crisis, portraying the global magnitude, challenges, and consequences. After that, it critically and comprehensively evaluates the potential roles of AMPs in addressing the AMR crisis, highlighting the major potentials and prospects.

微生物对抗生素的耐药性是一个古老而动态的问题,它使人们想起抗生素出现前的时代。目前,抗生素耐药性和相关感染广泛存在,并构成重大的全球健康和经济负担。因此,抗生素的滥用增加了耐药性,因此有必要寻找替代治疗药物来对抗耐药病原体。抗菌肽(AMPs)有望成为对抗耐药病原体的可行治疗方法。amp是低分子量的寡肽。它们对病原微生物具有广谱抗菌活性。amp是微生物的非特异性靶标成分,通过作为抵抗入侵病原微生物的第一线防御机制促进免疫反应。amp的多样性和效力使其成为替代使用的良好候选者。它们可以单独使用或与其他几种生物材料联合使用,以提高治疗活性。它们也可用于针对耐药病原体的疫苗生产。本文综述了针对抗菌素耐药性(AMR)细菌的AMP发现和开发的机遇和进展。简而言之,它概述了抗菌素耐药性危机的全球负担,描绘了全球规模、挑战和后果。然后,批判性和全面地评估amp在解决AMR危机中的潜在作用,突出主要潜力和前景。
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引用次数: 0
Gut Microbiota Modulation and Prevention of Dysbiosis as an Alternative Approach to Antimicrobial Resistance: A Narrative Review. 肠道菌群调节和预防失调作为抗微生物药物耐药性的另一种途径:叙述性综述。
IF 2.7 3区 工程技术 Q1 Medicine Pub Date : 2022-12-01
Rafail Matzaras, Anna Nikopoulou, Efthimia Protonotariou, Eirini Christaki

Background: The importance of gut microbiota in human health is being increasingly studied. Imbalances in gut microbiota have been associated with infection, inflammation, and obesity. Antibiotic use is the most common and significant cause of major alterations in the composition and function of the gut microbiota and can result in colonization with multidrug-resistant bacteria. Methods: The purpose of this review is to present existing evidence on how microbiota modulation and prevention of gut dysbiosis can serve as tools to combat antimicrobial resistance. Results: While the spread of antibiotic-resistant pathogens requires antibiotics with novel mechanisms of action, the number of newly discovered antimicrobial classes remains very low. For this reason, the application of alternative modalities to combat antimicrobial resistance is necessary. Diet, probiotics/prebiotics, selective oropharyngeal or digestive decontamination, and especially fecal microbiota transplantation (FMT) are under investigation with FMT being the most studied. But, as prevention is better than cure, the implementation of antimicrobial stewardship programs and strict infection control measures along with newly developed chelating agents could also play a crucial role in decreasing colonization with multidrug resistant organisms. Conclusion: New alternative tools to fight antimicrobial resistance via gut microbiota modulation, seem to be effective and should remain the focus of further research and development.

背景:肠道菌群在人类健康中的重要性正在得到越来越多的研究。肠道菌群失衡与感染、炎症和肥胖有关。抗生素的使用是导致肠道菌群组成和功能发生重大改变的最常见和最重要的原因,并可能导致多重耐药细菌的定植。方法:本综述的目的是介绍微生物群调节和预防肠道生态失调如何作为对抗抗生素耐药性的工具的现有证据。结果:虽然耐药病原体的传播需要具有新型作用机制的抗生素,但新发现的抗菌药物类别数量仍然很少。出于这个原因,应用替代方式来对抗抗菌素耐药性是必要的。饮食,益生菌/益生元,选择性口咽或消化道净化,特别是粪便微生物群移植(FMT)正在研究中,其中FMT研究最多。但是,预防胜于治疗,实施抗菌药物管理计划和严格的感染控制措施以及新开发的螯合剂也可以在减少多药耐药菌的定植方面发挥关键作用。结论:通过调节肠道菌群来对抗抗生素耐药的新替代工具似乎是有效的,应该成为进一步研究和开发的重点。
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引用次数: 0
Research status and development trend of altruism in the biological field - knowledge graph analysis based on CiteSpace 生物领域利他主义的研究现状与发展趋势——基于CiteSpace的知识图谱分析
IF 2.7 3区 工程技术 Q1 Medicine Pub Date : 2022-12-01 DOI: 10.17352/jbm.000034
Jia Li, Zhu Xianglei, X. Guoliang
Based on the visualization analysis of foreign literature on altruistic behavior in recent ten years (2012-2022) by CiteSpace, it is found that the research on altruistic behavior in the field of biology abroad has experienced the initial exploratory stage, the outbreak stage, and now enters the stable and deepening stage. The discipline distribution is mainly behavioral ecology, supplemented by evolutionary biology, biomathematics, and genetics. The author has three main cooperative groups, and a relatively tight cooperative network has been formed locally in related fields. From the perspective of cooperation degree, the cooperation density of major research institutions is high, and relevant research has been relatively mature. Judging from the period calculated in the software, altruism, cooperation, kin Selection, reciprocity, and inclusive fitness emerged earlier. In recent years, constitutive theory, density dependence, and Habitat construction have emerged, which may become a new direction for future research. Therefore, future research can expand the scope of disciplines, strengthen the cooperation between authors and units, and explore other research hotspots.
通过CiteSpace对近十年(2012-2022)国外利他行为文献的可视化分析发现,国外生物学领域的利他行为研究经历了初步探索阶段、爆发阶段,目前已进入稳定深化阶段。学科分布以行为生态学为主,进化生物学、生物数学、遗传学为辅。笔者主要有三个合作小组,在相关领域局部形成了较为紧密的合作网络。从合作程度来看,各大研究机构的合作密度高,相关研究已经相对成熟。从软件计算的时间来看,利他主义、合作、亲缘选择、互惠和包容适应度出现得更早。近年来出现了本构理论、密度依赖理论和生境构建理论,这可能成为未来研究的新方向。因此,未来的研究可以拓展学科范围,加强作者与单位的合作,探索其他研究热点。
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引用次数: 0
Antibiotics and Antimicrobial Resistance in Acne: Epidemiological Trends and Clinical Practice Considerations. 痤疮的抗生素和抗菌素耐药性:流行病学趋势和临床实践考虑。
IF 2.7 3区 工程技术 Q1 Medicine Pub Date : 2022-12-01
Clio Dessinioti, Andreas Katsambas

Antimicrobial resistance is an increasing public health problem worldwide. The interest of a focus on antimicrobial resistance in acne lies on the facts that acne vulgaris (acne) is the most common skin disease worldwide, that the bacterium Cutibacterium acnes (C. acnes, formerly Propionibacterium acnes) plays a key role in the pathogenesis of acne, while at the same time being part of the skin flora, and that antibiotics are commonly recommended for acne treatment. The overuse of topical and/or systemic antibiotics, the long treatment courses used for acne, and the availability of over-the-counter antibiotic preparations, have led to the worldwide emergence of resistant strains in acne patients. In this review, we discuss the epidemiological trends of antimicrobial resistance in acne, the need to avoid the perturbation of the skin microbiome caused by anti-acne antibiotics, and the clinical practice considerations related to the emergence of resistant strains in acne patients. In light of the increasing risk of antimicrobial resistance, raising concerns over the misuse of antibiotics, prescribing patterns can be a critical target for antibiotic stewardship efforts. Also, the selection of non-antibiotic therapies for acne, whenever possible, may offer significant advantages.

抗菌素耐药性是世界范围内日益严重的公共卫生问题。关注痤疮抗菌素耐药性的兴趣在于普通痤疮(痤疮)是世界范围内最常见的皮肤病,痤疮角膜炎杆菌(C. acnes,原痤疮丙酸杆菌)在痤疮的发病机制中起关键作用,同时也是皮肤菌群的一部分,抗生素通常被推荐用于痤疮治疗。局部和/或全身抗生素的过度使用,痤疮的长期治疗过程,以及非处方抗生素制剂的可用性,导致了世界范围内痤疮患者中耐药菌株的出现。本文就痤疮患者抗菌药物耐药性的流行趋势、避免抗痤疮抗生素引起皮肤微生物群紊乱的必要性以及痤疮患者出现耐药菌株的临床实践注意事项进行综述。鉴于抗菌素耐药性的风险日益增加,引起了对抗生素滥用的关注,处方模式可以成为抗生素管理工作的一个关键目标。此外,选择非抗生素治疗痤疮,只要可能,可能提供显著的优势。
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引用次数: 0
Brain Abscess Caused by Nocardia asteroides in a Diabetic Patient: A Rare Case Report. 糖尿病诺卡菌致脑脓肿1例报告。
IF 2.7 3区 工程技术 Q1 Medicine Pub Date : 2022-12-01
Hossein Ali Rahdar, Hamid Heidari, Morteza Karami-Zarandi, Tahereh Soori, Parisa Asadollahi, Hossein Kazemian

Nocardial brain abscess is usually associated with immunodeficiency, but can sometimes emerge in healthy individuals. This infection can be acquired through inhalation or direct inoculation of the bacteria, followed by dissemination to various organs, including the brain, through blood circulation. Mortality rate due to nocardial cerebral abscess is three times higher than that associated with cerebral abscess caused by other types of bacteria. Moreover, patients with Nocardia asteroides-associated brain abscess show poorer prognosis compared to patients with brain abscess caused by other Nocardia species, which is probably due to the high tendency of N. asteroides to become resistant to numerous antibiotics. It is, therefore, of paramount importance to diagnose and treat N. asteroides cerebral abscess in patients as soon as possible. The current paper is a rare report of a brain abscess caused by N. asteroides in a diabetic patient who failed to respond to multiple antibiotics (trimethoprim/sulfamethoxazole and amikacin), but improved by receiving imipenem and linezolid, and was finally successfully treated by surgical operation and long-term antibiotic therapy (imipenem and linezolid).

无心性脑脓肿通常与免疫缺陷有关,但有时也会出现在健康个体中。这种感染可以通过吸入或直接接种细菌获得,然后通过血液循环传播到包括大脑在内的各个器官。无心性脑脓肿的死亡率是其他细菌引起的脑脓肿的3倍。此外,与其他诺卡菌引起的脑脓肿相比,与小行星诺卡菌相关的脑脓肿患者预后较差,这可能是由于小行星诺卡菌对多种抗生素具有较高的耐药倾向。因此,尽早诊断和治疗脑脓肿是至关重要的。本文罕见报道1例糖尿病患者发生由N. asteroides引起的脑脓肿,多种抗生素(甲氧苄啶/磺胺甲恶唑和阿米卡星)治疗无效,经亚胺培南和利奈唑胺治疗后病情好转,最终通过手术和长期抗生素(亚胺培南和利奈唑胺)治疗成功。
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引用次数: 0
Pandemic panic and the culture of complacency 流行病恐慌和自满文化
IF 2.7 3区 工程技术 Q1 Medicine Pub Date : 2022-11-10 DOI: 10.17352/jbm.000033
Ford Brian J
The many legacies bequeathed to us by the COVID-19 pandemic have embraced novel approaches to vaccine development, a greater awareness of the principles of hygiene among the general public, the need for governments to take a proactive stance when faced with unfamiliar pathologies, and the role of specialist medical and scientific advisers. However, many of the claimed protocols are medieval in nature and have little scientific evidence to support their introduction. Similarly, we have failed to grasp the importance of the anti-vaccination campaigns, which are always founded on ignorance or willfulness, but on previous examples of duplicitous behavior by those in authority, coupled with our poor understanding of the way virus variants function, have engendered a sense that many of the precautions taken may have been unnecessary (Ford, 2020a). In consequence, I fear that future threats from hemolytic viruses of high transmissibility may be met with complacency. Improved public education, and greater academic transparency concerning the nature of risk, will be necessary if a future pandemic is to be effectively controlled.
2019冠状病毒病大流行给我们留下了许多遗产,包括开发疫苗的新方法、提高公众对卫生原则的认识、政府在面对不熟悉的疾病时采取积极态度的必要性,以及专业医学和科学顾问的作用。然而,许多声称的协议本质上是中世纪的,几乎没有科学证据支持它们的引入。同样,我们也没有意识到反疫苗运动的重要性,这些运动总是建立在无知或任性的基础上,而是建立在之前权威人士的两重性行为的例子上,再加上我们对病毒变异功能的理解不足,导致了一种感觉,即许多预防措施可能是不必要的(Ford, 2020a)。因此,我担心未来来自高传播性溶血病毒的威胁可能会自满。如果要有效控制未来的大流行,就必须改进公共教育,提高关于风险性质的学术透明度。
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引用次数: 0
Bacteriological pattern of urinary tract infection in men with symptomatic benign prostatic hyperplasia at a tertiary hospital in Nigeria 尼日利亚一家三级医院男性症状性良性前列腺增生患者尿路感染的细菌学模式
IF 2.7 3区 工程技术 Q1 Medicine Pub Date : 2022-10-29 DOI: 10.17352/jbm.000032
P. Ngwu, IE Ihedoro, EI Kalu
Introduction/Background: Benign Prostatic Hyperplasia (BPH) is characterized by narrowing of the prostatic urethra with resultant difficulty in passing urine, stasis, and a predisposition to urinary tract infection. The objective of this study is to identify the prevalence of urinary tract infections, common organisms isolated, their antimicrobial sensitivity pattern, and the relationship of co-morbidities with urinary tract infection in this population. Materials and methods: All patients who presented to our urology team with bladder outlet obstruction secondary to benign prostatic hyperplasia between January 2020 and January 2021 were included. Information on age, occupation, co-morbid conditions, urine microscopy, culture, and sensitivity patterns were obtained and analyzed using SPSS version 25. Midstream urine samples were collected from 172 BPH patients. Microscopy, culture, and antibiotic susceptibility tests were carried out. Results: From our study, the prevalence of bacteriuria was 67.9% with the 65-74 and 45-54 age groups having the highest and the least prevalence of bacteriuria (88.9% and 33.3% respectively). The most common organisms cultured from their urine were Pseudomonas (17.9%), E. coli (14.3%), Coliforms (10.7%), and Klebsiella (10.7%). Sensitivity patterns of these microorganisms revealed the highest sensitivity to the fluoroquinolones (25.9%) followed by Nitrofurantoin (14.8%) and Ceftriaxone and Cefoxitin (7.4%). The least sensitivity was to Augmentin and Gentamycin. Conclusion: Bacteriuria is common in patients with BPH. Pseudomonas spp was the commonest isolated organism in our study and most isolated organisms were susceptible to the fluoroquinolones.
简介/背景:良性前列腺增生(BPH)的特点是前列腺尿道变窄,导致排尿困难、瘀血和易发生尿路感染。本研究的目的是确定尿路感染的患病率,分离的常见微生物,它们的抗菌药物敏感性模式,以及合并症与尿路感染的关系。材料和方法:纳入2020年1月至2021年1月期间所有以良性前列腺增生继发膀胱出口梗阻就诊的泌尿科团队患者。年龄、职业、合并症、尿液显微镜、培养和敏感性模式的信息获得并使用SPSS版本25进行分析。收集172例BPH患者的中游尿液样本。进行显微镜、培养和抗生素敏感性试验。结果:本组细菌尿率为67.9%,其中65 ~ 74岁和45 ~ 54岁细菌尿率最高和最低,分别为88.9%和33.3%。从他们的尿液中培养的最常见的微生物是假单胞菌(17.9%)、大肠杆菌(14.3%)、大肠菌群(10.7%)和克雷伯氏菌(10.7%)。这些微生物对氟喹诺酮类药物的敏感性最高(25.9%),其次是呋喃妥英(14.8%)和头孢曲松和头孢西丁(7.4%)。对Augmentin和庆大霉素的敏感性最低。结论:细菌性尿路在前列腺增生患者中较为常见。假单胞菌是本研究中最常见的分离菌,大多数分离菌对氟喹诺酮类药物敏感。
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引用次数: 0
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Yale Journal of Biology and Medicine
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