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A Longitudinal Graduate Medical Education Curriculum in Clinical Informatics: Function, Structure, and Evaluation. 信息学教育特刊 临床信息学的纵向研究生医学教育课程:功能、结构和评估。
IF 2.1 2区 医学 Q4 MEDICAL INFORMATICS Pub Date : 2025-01-01 Epub Date: 2024-10-03 DOI: 10.1055/a-2432-0054
Bradley Rowland, Jacqueline You, Sarah Stern, Richa Bundy, Adam Moses, Lauren Witek, Corey Obermiller, Gary Rosenthal, Ajay Dharod

Background:  There is a need to integrate informatics education into medical training programs given the rise in demand for health informaticians and the call on the Accreditation Council for Graduate Medical Education and the body of undergraduate medical education for implementation of informatics curricula.

Objectives:  This report outlines a 2-year longitudinal informatics curriculum now currently in its seventh year of implementation. This report is intended to inform U.S. Graduate Medical Education (GME) program leaders of the necessary requirements for implementation of a similar program at their institution.

Methods:  The curriculum aligns with the core content for the subspecialty of clinical informatics (CI) and is led by a multidisciplinary team with both informatics and clinical expertise. This educational pathway has a low direct cost and is a practical example of the academic learning health system (aLHS) in action. The pathway is housed within an internal medicine department at a large tertiary academic medical center.

Results:  The curriculum has yielded 13 graduates from both internal medicine (11, 85%) and pediatrics (2, 15%) whose projects have spanned acute and ambulatory care and multiple specialties. Projects have included clinical decision support tools, of which some will be leveraged as substrate in applications seeking extramural funding. Graduates have gone on to CI board certification and fellowship, as well as several other specialties, creating a distributed network of clinicians with specialized experience in applied CI.

Conclusion:  An informatics curriculum at the GME level may increase matriculation to CI fellowship and more broadly increase development of the CI workforce through building a cadre of physicians with health information technology expertise across specialties without formal CI board certification. We offer an example of a longitudinal pathway, which is rooted in aLHS principles. The pathway requires a dedicated multidisciplinary team and departmental and information technology leadership support.

背景:鉴于对卫生信息学人才需求的增加,以及毕业医学教育认证委员会(ACGME)和本科医学教育机构(UGME)要求实施信息学课程,有必要将信息学教育纳入医学培训计划:本报告概述了为期两年的纵向信息学课程,该课程目前已实施到第七年。本报告旨在向美国(US)医学研究生教育(GME)项目负责人介绍在其所在机构实施类似项目的必要条件:该课程与临床信息学(CI)亚专科的核心内容相一致,由一个同时具备信息学和临床专业知识的多学科团队领导。这种教育途径的直接成本较低,是学术学习型医疗系统(aLHS)的一个实际范例。该课程设在一家大型三级学术医疗中心的内科部门:该课程已培养出 13 名毕业生,分别来自内科(11 人,占 85%)和儿科(2 人,占 15%),他们的项目涉及急诊和非住院医疗以及多个专科。这些项目包括临床决策支持(CDS)工具,其中一些将在申请校外资助时作为底层工具加以利用。毕业生已经获得了 CI 委员会认证和研究金,并进入了其他几个专科,形成了一个具有应用 CI 专业经验的临床医生分布式网络:结论:在全球医学教育中开设信息学课程可以提高 CI 研究员的入学率,并通过培养一批具有 HIT 专业技能但未获得正式 CI 委员会认证的专科医师,更广泛地促进 CI 人才队伍的发展。我们提供了一个纵向途径的实例,该途径植根于 aLHS 原则。该途径需要一个专门的多学科团队以及部门和 IT 领导层的支持。
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引用次数: 0
Epidemiology of Patient Record Duplication. 病历重复的流行病学。
IF 2.1 2区 医学 Q4 MEDICAL INFORMATICS Pub Date : 2025-01-01 Epub Date: 2024-09-27 DOI: 10.1055/a-2423-8499
Onur Sahin, Audrey Zhao, Reuben Joseph Applegate, Todd R Johnson, Elmer V Bernstam

Objectives:  Duplicate patient records can increase costs and medical errors. We assessed the association between demographic factors, comorbidities, health care usage, and duplicate electronic health records.

Methods:  We analyzed the association between duplicate patient records and multiple demographic variables (race, Hispanic ethnicity, sex, and age) as well as the Charlson Comorbidity Index (CCI), number of diagnoses, and number of health care encounters. The study population included 3,018,413 patients seen at a large urban academic medical center with at least one recorded diagnosis. Duplication of patient medical records was determined by using a previously validated enterprise Master Person Index.

Results:  Unknown or missing demographic data, Black race when compared with White race (odds ratio [OR]: 1.35, p < 0.001), Hispanic compared with non-Hispanic ethnicity (OR: 1.48, p < 0.001), older age (OR: 1.01, p < 0.001), and "Other" sex compared with female sex (OR: 4.71, p < 0.001) were associated with higher odds of having a duplicate record. Comorbidities (CCI, OR: 1.10, p < 0.001) and more encounters with the health care system (OR: 1.01, p < 0.001) were also associated with higher odds of having a duplicate record. In contrast, male sex compared with female sex was associated with lower odds of having a duplicate record (OR: 0.88, p < 0.001).

Conclusion:  The odds of duplications in medical records were higher in Black, Hispanic, older, nonmale patients with more health care encounters, more comorbidities, and unknown demographic data. Understanding the epidemiology of duplicate records can help guide prevention and mitigation efforts for high-risk populations. Duplicate records can contribute to disparities in health care outcomes for minority populations.

目的重复病历会增加成本和医疗失误。我们评估了人口统计学因素、合并症、医疗保健使用和重复电子病历之间的关联:我们分析了重复病历与多种人口统计学变量(种族、西班牙裔、性别和年龄)以及夏尔森合并症指数(CCI)、诊断次数和医疗保健就诊次数之间的关联。研究对象包括在一家大型城市学术医疗中心就诊的 3,018,413 名患者,这些患者至少有一项诊断记录。患者医疗记录的重复性是通过使用之前验证过的企业主人指数来确定的:未知或缺失的人口统计学数据、黑人种族与白人种族相比(OR 1.35,p < 0.001)、西班牙裔与非西班牙裔相比(OR 1.48,p < 0.001)、年龄较大(OR 1.01,p < 0.001)以及 "其他 "性别与女性性别相比(OR 4.71,p < 0.001)与重复病历的几率较高有关。合并症(CCI,OR 1.10,p < 0.001)和与医疗系统接触次数较多(OR 1.01,p < 0.001)也与重复病历的几率较高有关。相比之下,与女性相比,男性重复病历的几率较低(OR 0.88,p < 0.001):讨论:在黑人、西班牙裔、年龄较大、就医次数较多、合并症较多且人口统计学数据未知的非男性患者中,医疗记录重复的几率较高。了解重复病历的流行病学有助于指导高危人群的预防和缓解工作:结论:重复病历可能会导致少数群体的医疗结果出现差异。
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引用次数: 0
Development and Validation of the Nursing Information Security Questionnaire. 开发和验证护理信息安全问卷。
IF 2.1 2区 医学 Q4 MEDICAL INFORMATICS Pub Date : 2025-01-01 Epub Date: 2024-09-30 DOI: 10.1055/a-2424-2103
Xiaoyun Zhou, Xiujuan Jing, Tingting Gao, Hong Liu, Xuebing Jing

Background:  Ensuring the security of nursing information holds substantial importance to nursing outcomes and healthcare system management. The awareness of information security among nurses in China is generally inadequate, and there is a lack of standardized evaluation tools for nurse information security in nursing practice. The nursing sector necessitates the establishment of a robust culture surrounding information security.

Objective:  The aim of this study was to construct a self-reporting instrument for evaluating nursing information security.

Methods:  The research team utilized literature analysis and group discussions to draft the item pool. After two rounds of Delphi consultation by 15 experts and pilot testing, the initial questionnaire was formed. Item analysis was carried out on the questionnaire, and the validity and reliability of the instrument were statistically tested by computing the Keiser-Meier-Olkin and Bartlett's tests, an exploratory factor analysis (EFA), a confirmatory factor analysis (CFA), convergent and discriminative validity, descriptive statistics, Cronbach's α, and test-retest reliability.

Results:  A total of 501 nurses participated in the study, supplemented by the inclusion of five experts who were invited to contribute to the assessment of content validity. Four factors were formed using EFA (n = 250), and the cumulative variance contribution rate was found to be 60.10%. The CFA (n = 251) showed that the model fit was good. The overall Cronbach's α coefficient of the questionnaire was 0.948, and the test-retest reliability was 0.837.

Conclusion:  Finally, the nursing information security questionnaire (NIS-Q) with 38 items and three dimensions of knowledge, attitude, and practice were formed. A promising assessment instrument for gauging the degree of nursing information security was introduced. Further, a foundational platform was established for implementing specific enhancement strategies aimed at advancing nursing information security.

背景 确保护理信息安全具有重要意义。我国护士对信息安全的认识普遍不足,护理实践中缺乏规范的护士信息安全评估工具。护理行业需要建立健全的信息安全文化。目的 本研究旨在构建一个自我报告的护理信息安全评估工具。方法 研究小组利用文献分析和小组讨论起草了项目库。经过 15 位专家两轮德尔菲咨询和试点测试,形成了初步问卷。对问卷进行了项目分析,并通过计算 Keiser-Meier-Olkin (KMO) 和 Bartlett 检验、探索性因子分析、确认性因子分析、收敛效度和区分效度、描述性统计、Cronbach's α 和测试-再测信度对问卷的效度和信度进行了统计检验。结果 共有 501 名护士参与了研究,并邀请了五位专家参与内容效度评估。通过探索性因子分析(n=250)形成了四个因子,累计方差贡献率为 60.10%。确认性因子分析(n=251)显示模型拟合良好。问卷的总体 Cronbach's α 系数为 0.948,测试-再测信度为 0.837。结论 最后,38 个项目和知识、态度和实践三个维度的 NIS-Q 形成。为衡量护理信息安全程度提供了一个有前途的评估工具。此外,还为实施旨在提高护理信息安全的具体改进策略建立了基础平台。
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引用次数: 0
Communication Challenges Experienced by Clinicians and Patients during Teleconsultation: A Scoping Review. 临床医生和患者在远程会诊过程中遇到的沟通难题。范围审查。
IF 2.1 2区 医学 Q4 MEDICAL INFORMATICS Pub Date : 2025-01-01 Epub Date: 2024-09-30 DOI: 10.1055/a-2425-8626
Takashi Sota, Tim Jackson, Eleanor Yang, Annie Y S Lau

Background:  As teleconsultations continue to rise in popularity due to their convenience and accessibility, it is crucial to identify and address the challenges they present in order to improve the patient experience, enhance outcomes, and ensure the quality of care. To identify communication challenges that clinicians and patients experience during teleconsultation, a scoping review was conducted.

Objective:  This study aimed to identify communication challenges that clinicians and patients experience during teleconsultation.

Methods:  Studies were obtained from four databases (Ovid [MEDLINE], Ovid [Embase], CINAHL, and Scopus). Gray literatures were not included. Studies focused on communication challenges between clinicians and their patients during teleconsultation in the context of coronavirus disease 2019 (COVID-19) and published from January 2000 to December 2022, were collected. The screening process was conducted by two independent reviewers. Data extraction was performed using a standardized form to capture study characteristics and communication challenges. Extracted data were analyzed to identify the communication challenges during teleconsultation, adherent to Preferred Reporting Items for Systematic Reviews and Meta-Analyses for Scoping Review (PRISMA-ScR).

Results:  A total of 893 studies were collected from four databases and 26 studies were selected based on inclusion/exclusion criteria. Of these 26 eligible studies, 12 (46%) were from the United States, 3 studies (12%) were from Australia, and 2 (8%) were from the United Kingdom and Canada. These studies included 12 (46%) qualitative studies, 6 (23%) quantitative studies, 6 (23%) review articles, and 2 (8%) case reports. Eight factors contributing to communication challenges between clinicians and patients during teleconsultations were identified: technical issues, difficulties in developing rapport, lack of non-verbal communication, lack of physical examination, language barrier, spatial issues, clinician preparation, and difficulties in assessing patients' health literacy.

Conclusion:  Eight factors were identified as contributing to communication challenges during teleconsultation in the context of COVID-19. These findings highlight the need to address communication challenges to ensure effective teleconsultations. With the rise of teleconsultation in routine health care delivery, further research is warranted to confirm these findings and to explore ways to overcome communication challenges during teleconsultation.

背景 随着远程会诊因其便捷性和可及性而不断普及,识别并解决其带来的挑战以改善患者体验、提高疗效并确保医疗质量至关重要。为了确定临床医生和患者在远程会诊过程中遇到的沟通挑战,我们进行了一次范围界定综述。方法 从四个数据库(Ovid [MEDLINE]、Ovid [Embase]、CINAHL 和 Scopus)中获取研究结果。灰色文献未包括在内。收集了 2000 年 1 月至 2022 年 12 月期间发表的、以 COVID-19 为背景的、关于远程会诊过程中临床医生与患者之间沟通挑战的研究。筛选过程由两名独立审稿人进行。数据提取采用标准化表格,以捕捉研究特征和沟通挑战。根据 PRISMA-ScR 对提取的数据进行分析,以确定远程会诊过程中的沟通挑战。结果 从 4 个数据库中共收集到 893 项研究,根据纳入/排除标准筛选出 26 项研究。在这 26 项符合条件的研究中,12 项(46%)来自美国,3 项(12%)来自澳大利亚,2 项(8%)来自英国和加拿大。这些研究包括 12 项(46%)定性研究、6 项(23%)定量研究、6 项(23%)综述文章和 2 项(8%)病例报告。研究发现了导致临床医生与患者在远程会诊过程中沟通困难的八个因素:技术问题、难以建立融洽关系、缺乏非语言沟通、缺乏体格检查、语言障碍、空间问题、临床医生的准备工作以及难以评估患者的健康素养。结论 在 COVID-19 的研究中发现了导致远程会诊过程中沟通困难的八个因素。这些发现凸显了解决沟通难题以确保有效远程会诊的必要性。随着远程会诊在常规医疗保健服务中的兴起,有必要开展进一步的研究来证实这些发现,并探索克服远程会诊中沟通挑战的方法。
{"title":"Communication Challenges Experienced by Clinicians and Patients during Teleconsultation: A Scoping Review.","authors":"Takashi Sota, Tim Jackson, Eleanor Yang, Annie Y S Lau","doi":"10.1055/a-2425-8626","DOIUrl":"10.1055/a-2425-8626","url":null,"abstract":"<p><strong>Background: </strong> As teleconsultations continue to rise in popularity due to their convenience and accessibility, it is crucial to identify and address the challenges they present in order to improve the patient experience, enhance outcomes, and ensure the quality of care. To identify communication challenges that clinicians and patients experience during teleconsultation, a scoping review was conducted.</p><p><strong>Objective: </strong> This study aimed to identify communication challenges that clinicians and patients experience during teleconsultation.</p><p><strong>Methods: </strong> Studies were obtained from four databases (Ovid [MEDLINE], Ovid [Embase], CINAHL, and Scopus). Gray literatures were not included. Studies focused on communication challenges between clinicians and their patients during teleconsultation in the context of coronavirus disease 2019 (COVID-19) and published from January 2000 to December 2022, were collected. The screening process was conducted by two independent reviewers. Data extraction was performed using a standardized form to capture study characteristics and communication challenges. Extracted data were analyzed to identify the communication challenges during teleconsultation, adherent to Preferred Reporting Items for Systematic Reviews and Meta-Analyses for Scoping Review (PRISMA-ScR).</p><p><strong>Results: </strong> A total of 893 studies were collected from four databases and 26 studies were selected based on inclusion/exclusion criteria. Of these 26 eligible studies, 12 (46%) were from the United States, 3 studies (12%) were from Australia, and 2 (8%) were from the United Kingdom and Canada. These studies included 12 (46%) qualitative studies, 6 (23%) quantitative studies, 6 (23%) review articles, and 2 (8%) case reports. Eight factors contributing to communication challenges between clinicians and patients during teleconsultations were identified: technical issues, difficulties in developing rapport, lack of non-verbal communication, lack of physical examination, language barrier, spatial issues, clinician preparation, and difficulties in assessing patients' health literacy.</p><p><strong>Conclusion: </strong> Eight factors were identified as contributing to communication challenges during teleconsultation in the context of COVID-19. These findings highlight the need to address communication challenges to ensure effective teleconsultations. With the rise of teleconsultation in routine health care delivery, further research is warranted to confirm these findings and to explore ways to overcome communication challenges during teleconsultation.</p>","PeriodicalId":48956,"journal":{"name":"Applied Clinical Informatics","volume":" ","pages":"56-66"},"PeriodicalIF":2.1,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11735071/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142330581","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Interventions to Mitigate EHR and Documentation Burden in Health Professions Trainees: A Scoping Review. 减轻卫生专业受训人员电子病历和文件负担的干预措施:范围综述。
IF 2.1 2区 医学 Q4 MEDICAL INFORMATICS Pub Date : 2025-01-01 Epub Date: 2024-10-04 DOI: 10.1055/a-2434-5177
Deborah R Levy, Sarah C Rossetti, Cynthia A Brandt, Edward R Melnick, Andrew Hamilton, Seppo T Rinne, Dana Womack, Vishnu Mohan

Background:  Health professions trainees (trainees) are unique as they learn a chosen field while working within electronic health records (EHRs). Efforts to mitigate EHR burden have been described for the experienced health professional (HP), but less is understood for trainees. EHR or documentation burden (EHR burden) affects trainees, although not all trainees use EHRs, and use may differ for experienced HPs.

Objectives:  This study aimed to develop a model of how interventions to mitigate EHR burden fit within the trainee EHR workflow: the Trainee EHR Burden Model. (We: 1) Examined trainee experiences of interventions aimed at mitigating EHR burden (scoping review) and (2) Adapted an existing workflow model by mapping included studies (concept clarification).

Methods:  We conducted a four-database scoping review applying Preferred Reporting Items for Systematic Reviews and Meta-Analysis Extensions for Scoping Review (PRISMA-ScR) guidance, examining scholarly, peer-reviewed studies that measured trainee experience of interventions to mitigate EHR burden. We conducted a concept clarification categorizing, then mapping studies to workflow model elements. We adapted the model to intervenable points for trainee EHR burden.

Results:  We identified 11 studies examining interventions to mitigate EHR burden that measured trainee experience. Interventions included curriculum, training, and coaching on the existing EHR for both simulated or live tasks; evaluating scribes' impact; adding devices or technology tailored to rounds; and team communication or data presentation at end-of-shift handoffs. Interventions had varying effects on EHR burden, most commonly measured through surveys, and less commonly, direct observation. Most studies had limited sample sizes and focused on inpatient settings and physician trainees.

Conclusion:  Few studies measured trainee perspectives of interventions aiming to mitigate EHR burden. Many studies applied quasi-experimental designs and focused on inpatient settings. The Trainee EHR Burden Model, adapted from an existing workflow model, offers a starting place to situate points of intervention in trainee workflow. Further research is needed to design new interventions targeting stages of HP trainee workflow, in a range of clinical settings.

背景:卫生专业受训人员(受训人员)是独一无二的,他们在电子健康记录(EHR)中学习所选领域的知识。针对有经验的卫生专业人员(HP)减轻电子健康记录负担的努力已有描述,但对受训人员的了解较少。虽然并非所有受训人员都使用电子病历,而且经验丰富的医务人员使用电子病历的情况也可能不同,但电子病历或文档负担(EHR burden)对受训人员还是有影响的:建立一个模型,说明如何在受训者电子健康记录工作流程中采取干预措施减轻电子健康记录负担:受训者电子健康记录负担模型。1) 研究受训者对旨在减轻电子健康记录负担的干预措施的体验(范围审查)。2)通过映射纳入的研究,调整现有的工作流程模型(概念澄清):我们采用 PRISMA-ScR 指南,对 4 个数据库进行了范围审查,审查了衡量受训者对减轻电子病历负担的干预措施的体验的同行评审学术研究。我们进行了概念澄清分类,然后将研究映射到工作流程模型元素。我们将该模型调整为学员电子健康记录负担的可干预点:结果:我们确定了 11 项研究,这些研究探讨了减轻电子健康记录负担的干预措施,并对受训者的经验进行了衡量。干预措施包括:课程、培训、对现有电子病历进行模拟或现场任务指导;评估抄写员的影响;增加适合查房的设备或技术;在交接班时进行团队沟通或数据展示。干预措施对电子病历负担的影响各不相同,最常见的是通过调查来衡量,较少见的是直接观察。大多数研究的样本量有限,主要集中在住院环境和受训医师:结论:很少有研究测量受训者对旨在减轻电子病历负担的干预措施的看法。许多研究采用了准实验设计并侧重于住院环境。受训人员电子病历负担模型改编自现有的工作流程模型,为确定受训人员工作流程中的干预点提供了一个起点。需要进一步开展研究,在各种临床环境中针对 HP 受训人员工作流程的各个阶段设计新的干预措施。
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引用次数: 0
Elevating Clinical Informatics: Dynamic Resident Training to Enhance Subspecialty Appeal.
IF 2.1 2区 医学 Q4 MEDICAL INFORMATICS Pub Date : 2025-01-01 Epub Date: 2025-01-22 DOI: 10.1055/a-2431-9669
Justine Mrosak, Ryan Jelinek, Deepti Pandita

Objective:  This study aimed to bridge the educational gap in clinical informatics (CI) at the residency level and stimulate interest in CI as a rewarding career path.

Methods:  We developed an innovative CI and quality improvement (QI) resident rotation. This rotation replaced traditional QI blocks for Internal Medicine and several other residency programs, offering comprehensive exposure to core informatics and QI principles. The curriculum featured prerecorded didactics, hands-on projects, department meetings, and an optional EPIC SmartUser program. Resident participation and feedback were evaluated through postrotation surveys.

Results:  Since its inception on July 1, 2022, 57 residents have completed the rotation, with a majority rating their experience favorably. Residents also valued the educational course content and expressed an increased likelihood of integrating informatics into their future careers.

Conclusion:  The rotation has successfully integrated into existing multiple residency programs, demonstrating an effective model for delivering informatics education. Initial outcomes show enhanced resident engagement and competency in CI, promising a progressive impact on the future physician workforce. Continued expansion and evaluation of this rotation are expected to further encourage formal CI training and career interest.

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引用次数: 0
A Transformer-Based Pipeline for German Clinical Document De-Identification. 基于变压器的德国临床文件去识别管道。
IF 2.1 2区 医学 Q4 MEDICAL INFORMATICS Pub Date : 2025-01-01 Epub Date: 2025-01-08 DOI: 10.1055/a-2424-1989
Kamyar Arzideh, Giulia Baldini, Philipp Winnekens, Christoph M Friedrich, Felix Nensa, Ahmad Idrissi-Yaghir, René Hosch

Objective:  Commercially available large language models such as Chat Generative Pre-Trained Transformer (ChatGPT) cannot be applied to real patient data for data protection reasons. At the same time, de-identification of clinical unstructured data is a tedious and time-consuming task when done manually. Since transformer models can efficiently process and analyze large amounts of text data, our study aims to explore the impact of a large training dataset on the performance of this task.

Methods:  We utilized a substantial dataset of 10,240 German hospital documents from 1,130 patients, created as part of the investigating hospital's routine documentation, as training data. Our approach involved fine-tuning and training an ensemble of two transformer-based language models simultaneously to identify sensitive data within our documents. Annotation Guidelines with specific annotation categories and types were created for annotator training.

Results:  Performance evaluation on a test dataset of 100 manually annotated documents revealed that our fine-tuned German ELECTRA (gELECTRA) model achieved an F1 macro average score of 0.95, surpassing human annotators who scored 0.93.

Conclusion:  We trained and evaluated transformer models to detect sensitive information in German real-world pathology reports and progress notes. By defining an annotation scheme tailored to the documents of the investigating hospital and creating annotation guidelines for staff training, a further experimental study was conducted to compare the models with humans. These results showed that the best-performing model achieved better overall results than two experienced annotators who manually labeled 100 clinical documents.

目的:由于数据保护的原因,商业上可用的大型语言模型,如聊天生成预训练转换器(ChatGPT),不能应用于真实的患者数据。与此同时,临床非结构化数据的去识别是一项繁琐且耗时的任务。由于变压器模型可以有效地处理和分析大量文本数据,因此我们的研究旨在探索大型训练数据集对该任务性能的影响。方法:我们利用了来自1,130名患者的10,240份德国医院文件的大量数据集,作为调查医院常规文件的一部分创建,作为培训数据。我们的方法包括同时对两个基于转换器的语言模型进行微调和训练,以识别文档中的敏感数据。为注释员培训创建了带有特定注释类别和类型的注释指南。结果:在100个手动注释文档的测试数据集上进行的性能评估显示,我们经过微调的德国ELECTRA (gELECTRA)模型的F1宏观平均得分为0.95,超过了人类注释器的0.93分。结论:我们训练和评估了变压器模型,以检测德国真实世界病理报告和进展记录中的敏感信息。通过定义针对调查医院文件的注释方案,并为员工培训创建注释指南,进行了进一步的实验研究,将模型与人类进行比较。这些结果表明,表现最好的模型比两个有经验的注释者手动标记100个临床文档的总体结果更好。
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引用次数: 0
A Comprehensive Multifunctional Approach for Measuring Parkinson's Disease Severity. 测量帕金森病严重程度的多功能综合方法。
IF 2.1 2区 医学 Q4 MEDICAL INFORMATICS Pub Date : 2025-01-01 Epub Date: 2024-09-23 DOI: 10.1055/a-2420-0413
Morteza Rahimi, Zeina Al Masry, John Michael Templeton, Sandra Schneider, Christian Poellabauer

Objectives:  This research study aims to advance the staging of Parkinson's disease (PD) by incorporating machine learning to assess and include a broader multifunctional spectrum of neurocognitive symptoms in the staging schemes beyond motor-centric assessments. Specifically, we provide a novel framework to modernize and personalize PD staging more objectively by proposing a hybrid feature scoring approach.

Methods:  We recruited 37 individuals diagnosed with PD, each of whom completed a series of tablet-based neurocognitive tests assessing motor, memory, speech, executive functions, and tasks ranging in complexity from single to multifunctional. Then, the collected data were used to develop a hybrid feature scoring system to calculate a weighted vector for each function. We evaluated the current PD staging schemes and developed a new approach based on the features selected and extracted using random forest and principal component analysis.

Results:  Our findings indicate a substantial bias in current PD staging systems toward fine motor skills, that is, other neurological functions (memory, speech, executive function, etc.) do not map into current PD stages as well as fine motor skills do. The results demonstrate that a more accurate and personalized assessment of PD severity could be achieved by including a more exhaustive range of neurocognitive functions in the staging systems either by involving multiple functions in a unified staging score or by designing a function-specific staging system.

Conclusion:  The proposed hybrid feature score approach provides a comprehensive understanding of PD by highlighting the need for a staging system that covers various neurocognitive functions. This approach could potentially lead to more effective, objective, and personalized treatment strategies. Further, this proposed methodology could be adapted to other neurodegenerative conditions such as Alzheimer's disease or amyotrophic lateral sclerosis.

研究目的本研究旨在通过结合机器学习来评估帕金森病(PD)的分期,并在分期方案中纳入更广泛的多功能神经认知症状,而不是以运动为中心的评估。具体来说,我们提供了一个新颖的框架,通过提出一种混合特征评分方法,更客观地对帕金森病进行现代化和个性化分期:我们招募了 37 名确诊为帕金森病的患者,每个人都完成了一系列基于平板电脑的神经认知测试,这些测试评估了运动、记忆、言语、执行功能以及从单一功能到多功能的各种复杂任务。然后,我们将收集到的数据用于开发混合特征评分系统,为每项功能计算加权向量。我们评估了当前的帕金森病分期方案,并根据使用随机森林和主成分分析法选择和提取的特征开发了一种新方法:我们的研究结果表明,目前的帕金森病分期系统严重偏向于精细运动技能,即其他神经功能(记忆、语言、执行功能等)并不能像精细运动技能那样映射到目前的帕金森病分期中。研究结果表明,通过将多种神经认知功能纳入统一的分期评分或设计针对特定功能的分期系统,可以在分期系统中纳入更全面的神经认知功能,从而更准确、更个性化地评估帕金森病的严重程度:所提出的混合特征评分方法强调了建立一个涵盖各种神经认知功能的分期系统的必要性,从而提供了对帕金森病的全面认识。这种方法有可能带来更有效、客观和个性化的治疗策略。此外,这种方法还可适用于其他神经退行性疾病,如阿尔茨海默病或渐冻症。
{"title":"A Comprehensive Multifunctional Approach for Measuring Parkinson's Disease Severity.","authors":"Morteza Rahimi, Zeina Al Masry, John Michael Templeton, Sandra Schneider, Christian Poellabauer","doi":"10.1055/a-2420-0413","DOIUrl":"10.1055/a-2420-0413","url":null,"abstract":"<p><strong>Objectives: </strong> This research study aims to advance the staging of Parkinson's disease (PD) by incorporating machine learning to assess and include a broader multifunctional spectrum of neurocognitive symptoms in the staging schemes beyond motor-centric assessments. Specifically, we provide a novel framework to modernize and personalize PD staging more objectively by proposing a hybrid feature scoring approach.</p><p><strong>Methods: </strong> We recruited 37 individuals diagnosed with PD, each of whom completed a series of tablet-based neurocognitive tests assessing motor, memory, speech, executive functions, and tasks ranging in complexity from single to multifunctional. Then, the collected data were used to develop a hybrid feature scoring system to calculate a weighted vector for each function. We evaluated the current PD staging schemes and developed a new approach based on the features selected and extracted using random forest and principal component analysis.</p><p><strong>Results: </strong> Our findings indicate a substantial bias in current PD staging systems toward fine motor skills, that is, other neurological functions (memory, speech, executive function, etc.) do not map into current PD stages as well as fine motor skills do. The results demonstrate that a more accurate and personalized assessment of PD severity could be achieved by including a more exhaustive range of neurocognitive functions in the staging systems either by involving multiple functions in a unified staging score or by designing a function-specific staging system.</p><p><strong>Conclusion: </strong> The proposed hybrid feature score approach provides a comprehensive understanding of PD by highlighting the need for a staging system that covers various neurocognitive functions. This approach could potentially lead to more effective, objective, and personalized treatment strategies. Further, this proposed methodology could be adapted to other neurodegenerative conditions such as Alzheimer's disease or amyotrophic lateral sclerosis.</p>","PeriodicalId":48956,"journal":{"name":"Applied Clinical Informatics","volume":" ","pages":"11-23"},"PeriodicalIF":2.1,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11693400/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142308859","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effect of Tiered Implementation of Clinical Decision Support System for Acute Kidney Injury and Nephrotoxin Exposure in Cardiac Surgery Patients. 心脏手术患者急性肾损伤及肾毒素暴露临床决策支持系统分层实施的效果。
IF 2.1 2区 医学 Q4 MEDICAL INFORMATICS Pub Date : 2025-01-01 DOI: 10.1055/s-0044-1791822
Christopher M Justice, Connor Nevin, Rebecca L Neely, Brian Dilcher, Nicole Kovacic-Scherrer, Heather Carter-Templeton, Aaron Ostrowski, Jacob Krafcheck, Gordon Smith, Paul McCarthy, Jami Pincavitch, Sandra Kane-Gill, Robert Freeman, John A Kellum, Roopa Kohli-Seth, Girish N Nadkarni, Khaled Shawwa, Ankit Sakhuja

Background:  Nephrotoxin exposure may worsen kidney injury and impair kidney recovery if continued in patients with acute kidney injury (AKI).

Objectives:  This study aimed to determine if tiered implementation of a clinical decision support system (CDSS) would reduce nephrotoxin use in cardiac surgery patients with AKI.

Methods:  We assessed patients admitted to the cardiac surgery intensive care unit at a tertiary care center from January 2020 to December 2021, and August 2022 to September 2023. A passive electronic AKI alert was activated in July 2020, followed by an electronic nephrotoxin alert in March 2023. In this alert, active nephrotoxic medication orders resulted in a passive alert, whereas new orders were met with an interruptive alert. Primary outcome was discontinuation of nephrotoxic medications within 30 hours after AKI. Secondary outcomes included AKI-specific clinical actions, determined through modified Delphi process and patient-centered outcomes. We compared all outcomes across five separate eras, divided based on the tiered implementation of these alerts.

Results:  A total of 503 patients met inclusion criteria. Of 114 patients who received nephrotoxins before AKI, nephrotoxins were discontinued after AKI in 6 (25%) patients in pre AKI-alert era, 8 (33%) patients in post AKI-alert era, 7 (35%) patients in AKI-alert long-term follow up era, 7 (35%) patients in pre nephrotoxin-alert era, and 14 (54%) patients in post nephrotoxin-alert era (p = 0.047 for trend). Among AKI-specific consensus actions, we noted a decreased use of intravenous fluids, increased documentation of goal mean arterial pressure of 65 mm Hg or higher, and increased use of bedside point of care echocardiogram over time. Among exploratory clinical outcomes we found a decrease in proportion of stage III AKI, need for dialysis, and length of hospital stay over time.

Conclusion:  Tiered implementation of CDSS for recognition of AKI and nephrotoxin exposure resulted in a progressive improvement in the discontinuation of nephrotoxins.

背景:急性肾损伤(AKI)患者如果持续暴露肾毒素,可能会加重肾损伤和损害肾脏恢复。目的:本研究旨在确定分级实施临床决策支持系统(CDSS)是否会减少AKI心脏手术患者肾毒素的使用。方法:我们评估了2020年1月至2021年12月、2022年8月至2023年9月在一家三级医疗中心心脏外科重症监护病房住院的患者。被动电子AKI警报于2020年7月启动,随后于2023年3月启动了电子肾毒素警报。在此警报中,主动肾毒性药物订单导致被动警报,而新订单则出现中断警报。主要终点是AKI后30小时内停用肾毒性药物。次要结局包括aki特异性临床行为,通过改进的德尔菲过程和以患者为中心的结局确定。我们比较了五个不同时代的所有结果,根据这些警报的分层实施进行了划分。结果:共有503例患者符合纳入标准。在114例AKI前接受肾毒素治疗的患者中,AKI预警前停用肾毒素6例(25%),AKI预警后停用肾毒素8例(33%),AKI预警长期随访期停用肾毒素7例(35%),肾毒素预警前停用肾毒素7例(35%),肾毒素预警后停用肾毒素14例(54%)(趋势p = 0.047)。在aki特异性共识行动中,我们注意到静脉输液的使用减少,目标平均动脉压为65 mm Hg或更高的记录增加,并且随着时间的推移,床边护理点超声心动图的使用增加。在探索性临床结果中,我们发现随着时间的推移,III期AKI的比例、透析需求和住院时间都有所下降。结论:分级实施CDSS识别AKI和肾毒素暴露导致肾毒素停用的逐步改善。
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引用次数: 0
The Effect of Electronic Health Record and Immunization Information System Interoperability on Medical Practice Vaccination Workflow.
IF 2.1 2区 医学 Q4 MEDICAL INFORMATICS Pub Date : 2025-01-01 Epub Date: 2025-02-05 DOI: 10.1055/a-2434-5112
Kevin J Dombkowski, Pooja N Patel, Hannah K Peng, Anne E Cowan

Background:  Interoperability between electronic health records (EHR) and immunization information systems (IIS) may positively influence data quality, affecting timeliness, completeness, and accuracy of these data. However, the extent to which EHR/IIS interoperability may influence the day-to-day vaccination workflow and related recordkeeping tasks performed at medical practices is unclear.

Objective:  This study aimed to assess how EHR/IIS interoperability may influence the vaccination workflow at medical practices and to identify related impacts on clinical and administrative activities.

Methods:  We identified practices (family medicine, pediatrics, internal medicine, local health departments) from the Michigan Care Improvement Registry (MCIR), the statewide IIS in Michigan, representing each of the three HL7 interoperability levels (non-HL7, unidirectional, bidirectional). We conducted semi-structured interviews to assess how practices interact with the MCIR throughout the vaccination workflow. Transcripts were reviewed and coded to characterize practices' use of EHRs, MCIR, and other related technologies across the vaccination workflow.

Results:  Practices completed Phase 1 (n = 45) and Phase 2 (n = 42) interviews, representing a range of medical specialties, geographic locations, and sizes. HL7 connectivity expanded among the participating practices; by the conclusion of the study, all practices had initiated at least unidirectional HL7 capability. Providers and staff relied heavily upon both their EHRs and MCIR throughout a wide range of vaccination-related activities. Most practices relied on MCIR as their primary source of vaccination history information, and nearly all practices also reported use of paper forms, documentation, and other summaries throughout the vaccination workflow.

Conclusion:  Practices employed both their EHRs and IIS throughout the entire vaccination workflow, although the use of each relied heavily on paper-based processes. While benefits of adopting EHR/IIS interoperability were reported by practices, this may require staff to learn and implement new workflow processes that can be time consuming and may introduce new challenges.

{"title":"The Effect of Electronic Health Record and Immunization Information System Interoperability on Medical Practice Vaccination Workflow.","authors":"Kevin J Dombkowski, Pooja N Patel, Hannah K Peng, Anne E Cowan","doi":"10.1055/a-2434-5112","DOIUrl":"10.1055/a-2434-5112","url":null,"abstract":"<p><strong>Background: </strong> Interoperability between electronic health records (EHR) and immunization information systems (IIS) may positively influence data quality, affecting timeliness, completeness, and accuracy of these data. However, the extent to which EHR/IIS interoperability may influence the day-to-day vaccination workflow and related recordkeeping tasks performed at medical practices is unclear.</p><p><strong>Objective: </strong> This study aimed to assess how EHR/IIS interoperability may influence the vaccination workflow at medical practices and to identify related impacts on clinical and administrative activities.</p><p><strong>Methods: </strong> We identified practices (family medicine, pediatrics, internal medicine, local health departments) from the Michigan Care Improvement Registry (MCIR), the statewide IIS in Michigan, representing each of the three HL7 interoperability levels (non-HL7, unidirectional, bidirectional). We conducted semi-structured interviews to assess how practices interact with the MCIR throughout the vaccination workflow. Transcripts were reviewed and coded to characterize practices' use of EHRs, MCIR, and other related technologies across the vaccination workflow.</p><p><strong>Results: </strong> Practices completed Phase 1 (<i>n</i> = 45) and Phase 2 (<i>n</i> = 42) interviews, representing a range of medical specialties, geographic locations, and sizes. HL7 connectivity expanded among the participating practices; by the conclusion of the study, all practices had initiated at least unidirectional HL7 capability. Providers and staff relied heavily upon both their EHRs and MCIR throughout a wide range of vaccination-related activities. Most practices relied on MCIR as their primary source of vaccination history information, and nearly all practices also reported use of paper forms, documentation, and other summaries throughout the vaccination workflow.</p><p><strong>Conclusion: </strong> Practices employed both their EHRs and IIS throughout the entire vaccination workflow, although the use of each relied heavily on paper-based processes. While benefits of adopting EHR/IIS interoperability were reported by practices, this may require staff to learn and implement new workflow processes that can be time consuming and may introduce new challenges.</p>","PeriodicalId":48956,"journal":{"name":"Applied Clinical Informatics","volume":"16 1","pages":"101-110"},"PeriodicalIF":2.1,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11798654/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143257053","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Applied Clinical Informatics
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