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RNA therapeutics: Molecular mechanisms, and potential clinical translations. RNA 疗法:分子机制和潜在的临床应用。
3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-01-25 DOI: 10.1016/bs.pmbts.2023.12.012
Tiep Tien Nguyen, Yen Vi Nguyen Thi, Dinh-Toi Chu

RNA therapies involve the utilization of natural and artificial RNA molecules to control the expression and function of cellular genes and proteins. Initializing from 1990s, RNA therapies now show the rapid growth in the development and application of RNA therapeutics for treating various conditions, especially for undruggable diseases. The outstanding success of recent mRNA vaccines against COVID-19 infection again highlighted the important role of RNA therapies in future medicine. In this review, we will first briefly provide the crucial investigations on RNA therapy, from the first pieces of discovery on RNA molecules to clinical applications of RNA therapeutics. We will then classify the mechanisms of RNA therapeutics from various classes in the treatment of diseases. To emphasize the huge potential of RNA therapies, we also provide the key RNA products that have been on clinical trials or already FDA-approved. With comprehensive knowledge on RNA biology, and the advances in analysis, technology and computer-aid science, RNA therapies can bring a promise to be more expanding to the market in the future.

RNA 疗法涉及利用天然和人工 RNA 分子来控制细胞基因和蛋白质的表达和功能。RNA 疗法始于 20 世纪 90 年代,目前在治疗各种疾病,特别是无法用药物治疗的疾病方面,RNA 疗法的开发和应用呈现出快速增长的趋势。最近针对 COVID-19 感染的 mRNA 疫苗取得的巨大成功再次凸显了 RNA 疗法在未来医学中的重要作用。在这篇综述中,我们将首先简要介绍有关 RNA 疗法的重要研究,从 RNA 分子的首次发现到 RNA 疗法的临床应用。然后,我们将对各类 RNA 疗法治疗疾病的机制进行分类。为了强调 RNA 疗法的巨大潜力,我们还提供了已进入临床试验或已获得 FDA 批准的主要 RNA 产品。随着对 RNA 生物学知识的全面了解,以及分析、技术和计算机辅助科学的进步,RNA 疗法有望在未来扩大市场。
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引用次数: 0
Current progress in high-throughput screening for drug repurposing. 药物再利用高通量筛选的最新进展。
3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-04-16 DOI: 10.1016/bs.pmbts.2024.03.013
Khushal Khambhati, Deepak Siruka, Suresh Ramakrishna, Vijai Singh

High-throughput screening (HTS) is a simple, rapid and cost-effective solution to determine active candidates from large library of compounds. HTS is gaining attention from Pharmaceuticals and Biotechnology companies for accelerating their drug discovery programs. Conventional drug discovery program is time consuming and expensive. In contrast drug repurposing approach is cost-effective and increases speed of drug discovery as toxicity profile is already known. The present chapter highlight HTS technology including microplate, microfluidics, lab-on-chip, organ-on-chip for drug repurposing. The current chapter also highlights the application of HTS for bacterial infections and cancer.

高通量筛选 (HTS) 是一种简单、快速、经济高效的解决方案,可从大量化合物库中筛选出活性候选化合物。高通量筛选正日益受到制药和生物技术公司的关注,以加速其药物发现计划。传统的药物发现项目耗时长、成本高。相比之下,药物再利用方法成本效益高,而且由于已经知道毒性特征,因此可以提高药物发现的速度。本章重点介绍了用于药物再利用的 HTS 技术,包括微孔板、微流控、芯片实验室、芯片器官。本章还重点介绍了 HTS 在细菌感染和癌症方面的应用。
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引用次数: 0
An introduction to RNA therapeutics and their potentials. RNA 疗法及其潜力简介。
3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-01-25 DOI: 10.1016/bs.pmbts.2023.12.020
Nhat-Le Bui, Dinh-Toi Chu

RNA therapeutics is a biological term regarding the usage of RNA-based molecules for medical purposes. Thanks to the success of mRNA-vaccine production against COVID-19, RNA therapeutics has gained more and more attention and investigation from worldwide scientists. It is considered as one of the promising alternatives for conventional drugs. In this first chapter, we presented an overview of the history and perspectives of RNA therapeutics' development. This chapter also explained the underlying mechanisms of different RNA-based molecules, including antisense oligonucleotide, interfering RNA (iRNA), aptamer, and mRNA, from degrading mRNA to inactivating targeted protein. Although there are many advantages of RNA therapeutics, its challenges in designing RNA chemical structure and the delivery vehicle need to be discussed. We described advanced technologies in the development of drug delivery systems that are positively correlated to the efficacy of the drug. Our aim is to provide a general background of RNA therapeutics to the audience before introducing plenty of more detailed parts, including clinical applications in certain diseases in the following chapters of the "RNA therapeutics" book.

RNA 疗法是将 RNA 分子用于医疗目的的生物学术语。由于针对 COVID-19 的 mRNA 疫苗的成功生产,RNA 疗法得到了全世界科学家越来越多的关注和研究。它被认为是有希望替代传统药物的药物之一。在第一章中,我们概述了 RNA 疗法的发展历史和前景。本章还解释了不同 RNA 分子(包括反义寡核苷酸、干扰 RNA (iRNA)、适配体和 mRNA)从降解 mRNA 到灭活靶蛋白的基本机制。虽然 RNA 疗法有很多优点,但其在设计 RNA 化学结构和递送载体方面的挑战也需要讨论。我们介绍了与药物疗效正相关的药物输送系统开发方面的先进技术。我们的目的是向读者介绍 RNA 疗法的一般背景,然后在《RNA 疗法》一书的后续章节中介绍更详细的内容,包括某些疾病的临床应用。
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引用次数: 0
RNA therapeutics for neurological disease. 治疗神经系统疾病的 RNA 疗法。
3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-01-24 DOI: 10.1016/bs.pmbts.2024.01.005
Lien Nguyen

Neurological disorders are the group of diseases that primarily affect the center nervous system, which could lead to a significant negative impact on the ability of learning new skills, speaking, breathing, walking, judging, making decision, and other essential living skills. In the last decade, neurological disorders have significantly increased their impact to our community and become the one of leading causes of disability and death. The World Health Organization has identified neurological disorders including Alzheimer's disease and other dementia as the health crisis for the modern life. Tremendous ongoing research efforts focus on understanding of disease genetics, molecular mechanisms and developing therapeutic interventions. Because of the urgent need of the effective therapeutics and the recent advances in the toolkits and understanding for developing more drug-like RNA molecules, there is a growing interest for developing RNA therapeutics for neurological disorders. This article will discuss genetics and mechanisms of neurological disorders and how RNA-based molecules have been used to develop therapeutics for this group of diseases, challenges of RNA therapeutics and future perspectives on this rising therapeutic intervention tool.

神经系统疾病是一组主要影响中枢神经系统的疾病,可对学习新技能、说话、呼吸、行走、判断、决策和其他基本生活技能产生重大负面影响。近十年来,神经系统疾病对我们社会的影响显著增加,已成为导致残疾和死亡的主要原因之一。世界卫生组织已将包括阿尔茨海默病和其他痴呆症在内的神经系统疾病确定为现代生活中的健康危机。目前正在进行的大量研究工作侧重于了解疾病遗传学、分子机制和开发治疗干预措施。由于对有效疗法的迫切需求,以及最近在开发更多类似药物的 RNA 分子的工具包和理解方面取得的进展,人们对开发治疗神经系统疾病的 RNA 疗法的兴趣与日俱增。本文将讨论神经系统疾病的遗传学和发病机制、如何利用 RNA 分子开发这类疾病的疗法、RNA 疗法面临的挑战以及这一新兴治疗干预工具的未来前景。
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引用次数: 0
RNA therapeutics for respiratory diseases. 呼吸系统疾病的 RNA 治疗。
3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-01-25 DOI: 10.1016/bs.pmbts.2023.12.021
Hue Vu Thi, Linh Thao Tran, Huy Quang Nguyen, Dinh-Toi Chu

It has become increasingly common to utilize RNA treatment to treat respiratory illnesses. Experimental research on both people and animals has advanced quickly since the turn of the twenty-first century in an effort to discover a treatment for respiratory ailments that could not be accomplished with earlier techniques, specifically in treating prevalent respiratory diseases such as lung cancer, chronic obstructive pulmonary disease (COPD), respiratory infections caused by viruses, and asthma. This chapter has provided a comprehensive overview of the scientific evidence in applying RNA therapy to treat respiratory diseases. The chapter describes the development of this therapy for respiratory diseases. At the same time, the types of RNA therapy for respiratory diseases have been highlighted. In addition, the mechanism of this therapy for respiratory diseases has also been covered. These insights are indispensable if this therapy is to be developed widely.

利用核糖核酸治疗呼吸系统疾病已变得越来越普遍。进入二十一世纪以来,对人和动物的实验研究进展迅速,努力探索早期技术无法实现的呼吸系统疾病治疗方法,特别是在治疗肺癌、慢性阻塞性肺病(COPD)、病毒引起的呼吸道感染和哮喘等流行的呼吸系统疾病方面。本章全面概述了应用 RNA 疗法治疗呼吸系统疾病的科学证据。本章介绍了该疗法治疗呼吸系统疾病的发展情况。同时,重点介绍了治疗呼吸系统疾病的 RNA 疗法的类型。此外,还介绍了该疗法治疗呼吸系统疾病的机制。如果要广泛开发这种疗法,这些见解是必不可少的。
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引用次数: 0
Current approaches in identification of a novel drug targets for drug repurposing. 确定新药靶点以实现药物再利用的现有方法。
3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-04-04 DOI: 10.1016/bs.pmbts.2024.03.020
Khushal Khambhati, Vijai Singh

Currently, millions of drugs and their licence have been expired or will be expiring in near future. Therefore, existing USFDA approved drug can be used for treating another disease. The above-mentioned approach falls under the category of drug repurposing. Drug repurposing is an alternative strategy for finding new applications of existing USFDA approved drugs. Identification of a novel drug target is one of the go to way for drug repurposing so that new therapeutic applications of USFDA approved drugs could be determined. Recent advances in computational biology and bioinformatics can help to accelerate the same. Drug repurposing can save time and resource as compared to discovery of an entirely new drug molecule. In this chapter, we explore different strategies for discovery of a novel drug target and its uses for drug repurposing to treat disease.

目前,有数百万种药物及其许可证已经过期或即将过期。因此,美国食品及药物管理局批准的现有药物可用于治疗另一种疾病。上述方法属于药物再利用的范畴。药物再利用是为美国食品及药物管理局批准的现有药物寻找新用途的另一种策略。确定新的药物靶点是药物再利用的首选方法之一,这样就能确定 USFDA 批准药物的新治疗用途。计算生物学和生物信息学的最新进展有助于加快这一进程。与发现全新的药物分子相比,药物再利用可以节省时间和资源。在本章中,我们将探讨发现新型药物靶点的不同策略及其在药物再利用治疗疾病中的用途。
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引用次数: 0
RNA therapeutics for metabolic disorders. 治疗代谢紊乱的 RNA 疗法。
3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-01-25 DOI: 10.1016/bs.pmbts.2023.12.014
Thuy-Duong Vu, Sheng-Che Lin, Chia-Ching Wu, Dinh-Toi Chu

The prevalence of metabolic disorders is increasing exponentially and has recently reached epidemic levels. Over the decades, a large number of therapeutic options have been proposed to manage these diseases but still show several limitations. In this circumstance, RNA therapeutics have rapidly emerged as a new hope for patients with metabolic diseases. 57 years have elapsed from the discovery of mRNA, a large number of RNA-based drug candidates have been evaluated for their therapeutic effectiveness and clinical safety under clinical studies. To date, there are seven RNA drugs for treating metabolic disorders receiving official approval and entering the global market. Their targets include hereditary transthyretin-mediated amyloidosis (hATTR), familial chylomicronemia syndrome, acute hepatic porphyria, primary hyperoxaluria type 1 and hypercholesterolemia, which are all related to liver proteins. All of these seven RNA drugs are antisense oligonucleotides (ASO) and small interfering RNA (siRNA). These two types of treatment are both based on oligonucleotides complementary to target RNA through Watson-Crick base-pairing, but their mechanisms of action include different nucleases. Such treatments show greatest potential among all types of RNA therapeutics due to consecutive achievements in chemical modifications. Another method, mRNA therapeutics also promise a brighter future for patients with a handful of drug candidates currently under development.

代谢性疾病的发病率呈指数级增长,最近已达到流行病的水平。几十年来,人们提出了大量治疗这些疾病的方案,但仍存在一些局限性。在这种情况下,RNA 疗法迅速崛起,成为代谢性疾病患者的新希望。从发现 mRNA 至今已有 57 年的时间,大量基于 RNA 的候选药物在临床研究中接受了治疗效果和临床安全性的评估。迄今为止,已有七种治疗代谢性疾病的 RNA 药物获得正式批准并进入全球市场。它们的靶点包括遗传性转甲状腺素介导的淀粉样变性(hATTR)、家族性乳糜泻综合征、急性肝卟啉症、原发性高草酸尿症 1 型和高胆固醇血症,均与肝脏蛋白有关。这七种 RNA 药物均为反义寡核苷酸(ASO)和小干扰 RNA(siRNA)。这两种治疗方法都是基于通过沃森-克里克碱基配对与靶 RNA 互补的寡核苷酸,但它们的作用机制包括不同的核酸酶。由于化学修饰技术的不断进步,这类疗法在所有类型的 RNA 疗法中显示出最大的潜力。另一种方法--mRNA疗法也为患者带来了光明的未来,目前有一些候选药物正在开发中。
{"title":"RNA therapeutics for metabolic disorders.","authors":"Thuy-Duong Vu, Sheng-Che Lin, Chia-Ching Wu, Dinh-Toi Chu","doi":"10.1016/bs.pmbts.2023.12.014","DOIUrl":"10.1016/bs.pmbts.2023.12.014","url":null,"abstract":"<p><p>The prevalence of metabolic disorders is increasing exponentially and has recently reached epidemic levels. Over the decades, a large number of therapeutic options have been proposed to manage these diseases but still show several limitations. In this circumstance, RNA therapeutics have rapidly emerged as a new hope for patients with metabolic diseases. 57 years have elapsed from the discovery of mRNA, a large number of RNA-based drug candidates have been evaluated for their therapeutic effectiveness and clinical safety under clinical studies. To date, there are seven RNA drugs for treating metabolic disorders receiving official approval and entering the global market. Their targets include hereditary transthyretin-mediated amyloidosis (hATTR), familial chylomicronemia syndrome, acute hepatic porphyria, primary hyperoxaluria type 1 and hypercholesterolemia, which are all related to liver proteins. All of these seven RNA drugs are antisense oligonucleotides (ASO) and small interfering RNA (siRNA). These two types of treatment are both based on oligonucleotides complementary to target RNA through Watson-Crick base-pairing, but their mechanisms of action include different nucleases. Such treatments show greatest potential among all types of RNA therapeutics due to consecutive achievements in chemical modifications. Another method, mRNA therapeutics also promise a brighter future for patients with a handful of drug candidates currently under development.</p>","PeriodicalId":49280,"journal":{"name":"Progress in Molecular Biology and Translational Science","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139742450","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Advantages and disadvantages of RNA therapeutics. RNA 疗法的优缺点。
3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-01-25 DOI: 10.1016/bs.pmbts.2023.12.016
Binh Le Huy, Hai Bui Thi Phuong, Huy Luong Xuan

RNA therapeutics is an innovative and rapidly evolving field at the forefront of medical research and biotechnology. Recently, many studies have shown that diverse RNA types play important roles in cells. Besides the protein translation coding, they also express and regulate a variety of cellular pathways. Indeed, along with the research and studies, many drugs and vaccines were developed from RNAs, including both coding and non-coding RNA. Some cases were approved to be medicines or under clinical trial. After years of use and application, they have shown a bright opportunity to prevent and treat many fatal and rare diseases with many strong points, such as fast production and long-term effects. Besides, they still have some drawbacks that need to be overcome, like stability or delivery to become the new generation of medicine. Therefore, this chapter focuses on providing an overview of the advantages and disadvantages of RNA therapeutics as well as some crucial points for future development.

RNA 疗法是一个创新且发展迅速的领域,处于医学研究和生物技术的前沿。最近,许多研究表明,各种类型的 RNA 在细胞中发挥着重要作用。除了编码蛋白质翻译外,它们还表达和调控多种细胞通路。事实上,随着研究的深入,许多药物和疫苗都是从 RNA(包括编码和非编码 RNA)中开发出来的。有些已被批准为药品,有些正在进行临床试验。经过多年的使用和应用,它们在预防和治疗许多致命疾病和罕见疾病方面展现出了光明的前景,并具有生产速度快、疗效持久等诸多优点。此外,它们仍有一些缺点需要克服,如稳定性或传递性,以成为新一代药物。因此,本章将重点概述 RNA 疗法的优缺点以及未来发展的一些关键点。
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引用次数: 0
RNA therapeutics for treatment of diabetes. 治疗糖尿病的 RNA 疗法。
3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-01-25 DOI: 10.1016/bs.pmbts.2023.12.013
Yen Vy Nguyen Thi, Thuy Tien Ho, Safak Caglayan, Thamil Selvee Ramasamy, Dinh-Toi Chu

Diabetes is an ongoing global problem as it affects health of more than 537 million people around the world. Diabetes leaves many serious complications that affect patients and can cause death if not detected and treated promptly. Some of the complications of diabetes include impaired vascular system, increased risk of stroke, neurological diseases that cause pain and numbness, diseases related to the retina leading to blindness, and other complications affecting kidneys, heart failure, muscle weakness, muscle atrophy. All complications of diabetes seriously affect the health of patients. Recently, gene therapy has emerged as a viable treatment strategy for various diseases. DNA and RNA are among the target molecules that can change the structure and function of proteins and are effective methods of treating diseases, especially genetically inherited diseases. RNA therapeutics has attracted deep interest as it has been approved for application in the treatment of functional system disorders such as spinal muscular atrophy, and muscular dystrophy. In this review, we cover the types of RNA therapies considered for treatment of diabetes. In particular, we delve into the mechanism of action of RNA therapies for diabetes, and studies involving testing of these RNA therapies. Finally, we have highlighted the limitations of the current understanding in the mechanism of action of RNA therapies.

糖尿病是一个持续存在的全球性问题,它影响着全世界超过 5.37 亿人的健康。糖尿病会引发许多严重的并发症,如果不及时发现和治疗,可能会导致患者死亡。糖尿病的一些并发症包括血管系统受损、中风风险增加、导致疼痛和麻木的神经系统疾病、导致失明的视网膜相关疾病,以及影响肾脏、心力衰竭、肌肉无力和肌肉萎缩的其他并发症。所有糖尿病并发症都会严重影响患者的健康。近来,基因疗法已成为治疗各种疾病的可行方法。DNA 和 RNA 是可以改变蛋白质结构和功能的靶分子,是治疗疾病,尤其是遗传性疾病的有效方法。RNA 疗法已被批准用于治疗脊髓性肌萎缩症和肌肉萎缩症等功能性系统疾病,因此引起了人们的浓厚兴趣。在本综述中,我们将介绍用于治疗糖尿病的 RNA 疗法的类型。特别是,我们深入探讨了治疗糖尿病的 RNA 疗法的作用机制,以及涉及这些 RNA 疗法测试的研究。最后,我们强调了目前对 RNA 疗法作用机制认识的局限性。
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引用次数: 0
Reimagining old drugs with new tricks: Mechanisms, strategies and notable success stories in drug repurposing for neurological diseases. 老药新用:神经系统疾病药物再利用的机制、策略和显著的成功案例。
3区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 Epub Date: 2024-04-03 DOI: 10.1016/bs.pmbts.2024.03.029
Neetu Rani, Aastha Kaushik, Shefali Kardam, Sonika Kag, V Samuel Raj, Rashmi K Ambasta, Pravir Kumar

Recent evolution in drug repurposing has brought new anticipation, especially in the conflict against neurodegenerative diseases (NDDs). The traditional approach to developing novel drugs for these complex disorders is laborious, time-consuming, and often abortive. However, drug reprofiling which is the implementation of illuminating novel therapeutic applications of existing approved drugs, has shown potential as a promising strategy to accelerate the hunt for therapeutics. The advancement of computational approaches and artificial intelligence has expedited drug repurposing. These progressive technologies have enabled scientists to analyse extensive datasets and predict potential drug-disease interactions. By prospecting into the existing pharmacological knowledge, scientists can recognise potential therapeutic candidates for reprofiling, saving precious time and resources. Preclinical models have also played a pivotal role in this field, confirming the effectiveness and mechanisms of action of repurposed drugs. Several studies have occurred in recent years, including the discovery of available drugs that demonstrate significant protective effects in NDDs, relieve debilitating symptoms, or slow down the progression of the disease. These findings highlight the potential of repurposed drugs to change the landscape of NDD treatment. Here, we present an overview of recent developments and major advances in drug repurposing intending to provide an in-depth analysis of traditional drug discovery and the strategies, approaches and technologies that have contributed to drug repositioning. In addition, this chapter attempts to highlight successful case studies of drug repositioning in various therapeutic areas related to NDDs and explore the clinical trials, challenges and limitations faced by researchers in the field. Finally, the importance of drug repositioning in drug discovery and development and its potential to address discontented medical needs is also highlighted.

药物再利用的最新发展带来了新的期待,尤其是在抗击神经退行性疾病(NDDs)方面。针对这些复杂疾病开发新型药物的传统方法费力、耗时,而且往往是徒劳的。然而,药物再筛选(即对现有获批药物的新型治疗应用进行阐明)已显示出作为一种有前途的战略来加速寻找治疗方法的潜力。计算方法和人工智能的进步加快了药物再利用的进程。这些先进技术使科学家们能够分析大量数据集,预测潜在的药物-疾病相互作用。通过挖掘现有的药理学知识,科学家们可以识别出潜在的候选疗法,进行再筛选,从而节省宝贵的时间和资源。临床前模型在这一领域也发挥了关键作用,证实了再利用药物的有效性和作用机制。近年来开展了多项研究,其中包括发现了对 NDD 有显著保护作用、能缓解衰弱症状或延缓疾病进展的现有药物。这些研究结果凸显了再利用药物改变 NDD 治疗格局的潜力。在此,我们将概述药物再利用的最新发展和主要进展,旨在深入分析传统药物发现以及有助于药物再定位的策略、方法和技术。此外,本章还试图重点介绍与 NDD 相关的各个治疗领域中药物再定位的成功案例研究,并探讨该领域研究人员所面临的临床试验、挑战和限制。最后,本章还强调了药物重新定位在药物发现和开发中的重要性,以及它在满足不满意的医疗需求方面的潜力。
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引用次数: 0
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Progress in Molecular Biology and Translational Science
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