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The Pathway of Amyloid Aggregation of Titin Titin 的淀粉样蛋白聚集途径
IF 4.033 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-03-18 DOI: 10.1134/S0006350923060039
L. G. Bobyleva, T. A. Uryupina, M. A. Timchenko, S. N. Udaltsov, I. M. Vikhlyantsev, A. G. Bobylev

The process of amyloid aggregation is quite complex and poorly studied. In this paper, summarizing the previously obtained results on the aggregation of the multidomain smooth muscle protein titin, we tried to complement the idea of its amyloid aggregation by presenting a new, in our opinion, possible mechanism. The main conclusion is that the ability of titin to form amorphous aggregates seems to be the only possible means of aggregation of this protein. Apparently, only individual sections of the molecules, and not the entire protein, are involved in the formation of the amyloid structure in amorphous aggregates of smooth muscle titin. This feature distinguishes titin from other amyloid or amyloid-like proteins due to the large size of the molecule. The possible energy landscape underlying the formation of amyloid aggregates of titin is discussed.

摘要淀粉样蛋白的聚集过程相当复杂,研究也不深入。在本文中,我们总结了以前获得的有关多域平滑肌蛋白 titin 聚集的结果,试图通过提出一种新的、我们认为可能的机制来补充其淀粉样聚集的观点。主要结论是,滴定蛋白形成无定形聚集体的能力似乎是这种蛋白质聚集的唯一可能途径。显然,在平滑肌 titin 的无定形聚集体中,只有分子的个别部分而不是整个蛋白质参与了淀粉样结构的形成。由于分子体积较大,这一特征将 titin 与其他淀粉样或类淀粉样蛋白区分开来。本文讨论了形成泰汀淀粉样聚集体的可能能量图谱。
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引用次数: 0
Simulation of Fluorescence Spectrum Related to Photosynthesis 模拟与光合作用有关的荧光光谱
IF 4.033 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-03-18 DOI: 10.1134/S0006350923060222
S. I. Zienko, V. L. Zhbanova

A mathematical study of fluorescence spectrum related to photosynthesis action spectrum was carried out, the calculation of typical photosynthesis spectra on the frequency scale for red and blue light was performed, and the transition of the photosynthesis action spectrum from wavelengths to the frequency scale was carried out; as a result of the inverse Fourier transform, a relaxation curve of the pulse (time) characteristic of fluorescence was numerically obtained. It turned out that the radius vector of the pulse response modulus in polar coordinates made one half turn or half the period of light oscillations in time. It has been found that the optical medium of a plant has a negative volume charge of electrons during relaxation and has inverse properties and properties of coherent radiation. The condition of neutrality of the material environment is not fulfilled. It was revealed that the ratios of variable chlorophyll fluorescence for red and blue light have almost the same value. An analysis of the dependence of the quality factor of the chlorophyll spectrum on frequency showed that the loss of fluorescence energy in blue light significantly exceeds the loss of energy in red light. The proposed method can be used for rapid analysis of photosynthesis intensity. It is also concluded that plants can emit ultra-wideband signals. The relaxation time of chlorophyll fluorescence is shorter than the relaxation time of electron polarization in atoms (molecules). As a result, an inversion of populations is created in the optical medium of chlorophyll, that is, there are more atoms at the upper energy level than at the lower one. Due to this, forced emission and amplification of the light of radiative recombination occurs. In this case, the emission of fluorescence light becomes coherent. All these properties of plants were considered for the first time and were not described in either the domestic or foreign literature.

摘要 对与光合作用光谱相关的荧光光谱进行了数学研究,计算了红光和蓝光在频率尺度上的典型光合作用光谱,并将光合作用光谱从波长尺度过渡到频率尺度;通过反傅里叶变换,数值得到了荧光脉冲(时间)特性的弛豫曲线。结果发现,脉冲响应模量的极坐标半径矢量在时间上转了半圈,即光振荡周期的一半。研究发现,植物的光学介质在弛豫过程中电子的体积电荷为负,具有反相性质和相干辐射性质。物质环境的中性条件没有得到满足。研究表明,红光和蓝光的可变叶绿素荧光比值几乎相同。叶绿素光谱的品质因数与频率的关系分析表明,蓝光中荧光能量的损失明显超过红光中的能量损失。所提出的方法可用于快速分析光合作用强度。研究还得出结论,植物可以发射超宽带信号。叶绿素荧光的弛豫时间比原子(分子)中电子极化的弛豫时间短。因此,在叶绿素的光学介质中产生了种群反转,即高能级的原子多于低能级的原子。因此,辐射重组的光会强制发射和放大。在这种情况下,荧光的发射会变得连贯。植物的所有这些特性都是第一次被考虑到,国内外的文献中都没有描述过。
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引用次数: 0
A Method of Short-Term Forecasting of Ultradian and Infradian Rhythms Based on the Recording of Fluctuations in the Rates of Radioactive Decay of Potassium-40 基于钾-40 放射性衰变率波动记录的超昼夜节律和无昼夜节律短期预测方法
IF 4.033 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-03-18 DOI: 10.1134/S0006350923060052
M. E. Diatroptov, M. A. Diatroptova, S. M. Slesarev

Simultaneous observations of radioactivity fluctuations from the natural isotope 40K were carried out in Moscow and Ulyanovsk. It was found that the changes in the counting rate from sources in these geographical points were not simultaneous, but were synchronized according to local solar time. Based on this observation and considering that radioactivity fluctuations correlated with body temperature rhythms, a method for short-term prediction of ultradian rhythms of animal activity has been developed and confirmed. An analysis of the consistency of the dynamics of the intensity of decay fluctuations and daily growth rates of an L-929 cell culture was also carried out. It was found that the highest correlation coefficient was recorded when the indicator of proliferative activity of the culture was compared with the intensity of decay fluctuations taken over the previous day. Thus, based on data on fluctuations in the radioactive decay of 40K, which are an indicator of the biotropic factor of the environment, it is possible to make short-term forecasts of ultradian and infradian biological rhythms.

摘要 在莫斯科和乌里扬诺夫斯克对天然同位素 40K 的放射性波动进行了同步观测。结果发现,这两个地理点的放射源的计数率变化不是同时发生的,而是根据当地太阳时同步变化的。根据这一观察结果,并考虑到放射性波动与体温节律相关,制定并确认了一种短期预测动物活动超昼夜节律的方法。此外,还对 L-929 细胞培养物的衰变波动强度动态与日生长率的一致性进行了分析。结果发现,当将培养物的增殖活动指标与前一天的衰变波动强度进行比较时,相关系数最高。因此,根据 40K 放射性衰变波动的数据(这是环境中生物促进因素的指标),可以对超昼夜和非昼夜生物节律进行短期预测。
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引用次数: 0
A Study on the Radiosensitivity and Induction of Adaptive Response in Peripheral Blood Lymphocytes of Patients with Secondary Immunodeficiency Syndrome 继发性免疫缺陷综合征患者外周血淋巴细胞的放射敏感性和适应性反应诱导研究
IF 4.033 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-03-07 DOI: 10.1134/S000635092305024X
O. M. Rozanova, E. N. Smirnova, T. A. Belyakova, N. S. Strelnikova

This study examined radiosensitivity to low- and high-dose exposure to X-rays in human lymphocytes and the ability of low and high radiation doses to induce radioadaptive response when peripheral blood cells from patients with secondary immune deficiency syndrome and healthy donors of different ages were irradiated in vitro. The occurrence of micronuclei in cytochalasin-blocked binucleated lymphocytes in culture served as an indication of cytogenetic damage. It was found that the spontaneous level of cytogenetic damage in blood lymphocytes of patients with secondary immune deficiency syndrome was 2.5 times greater than in healthy young and older volunteers, and there was also a substantial interindividual variability in the outcome parameters as compared to the data of control groups. There were no differences in the mean values for radiosensitivity to low- and high-dose exposure to X-rays between the groups. In all groups, no correlation was shown between the spontaneous level of micronuclei in lymphocytes and the radiosensitivity of individuals. The adaptive response was induced with the same frequency and to the same extent in lymphocytes in patients with secondary immune deficiency syndrome and in healthy donors of different ages.

摘要 这项研究考察了人体淋巴细胞对低剂量和高剂量 X 射线照射的辐射敏感性,以及不同年龄的继发性免疫缺陷综合征患者和健康供体的外周血细胞在体外照射时,低剂量和高剂量辐射诱导辐射适应反应的能力。细胞毒素阻断的双核淋巴细胞在培养过程中出现的微核是细胞遗传损伤的标志。研究发现,继发性免疫缺陷综合征患者血液淋巴细胞自发的细胞遗传损伤程度是健康青年和老年志愿者的 2.5 倍,与对照组数据相比,结果参数的个体间差异也很大。各组之间对低剂量和高剂量 X 射线照射的辐射敏感性平均值没有差异。在所有组别中,淋巴细胞自发微核水平与个体的辐射敏感性之间没有相关性。继发性免疫缺陷综合征患者和不同年龄的健康供体的淋巴细胞诱发适应性反应的频率和程度相同。
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引用次数: 0
The Cellular Response to Exposure to Ionizing Radiation and Light in the Presence of a Photosensitizer 光敏剂存在时细胞对电离辐射和光的反应
IF 4.033 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-03-07 DOI: 10.1134/S0006350923050044
S. V. Akulinichev, S. I. Glukhov, A. V. Efremenko, D. A. Kokontsev, E. A. Kuznetsova, V. V. Martynova, A. V. Feofanov, I. A. Yakovlev

The combined use of X-ray irradiation and photodynamic therapy on a model of human lung adenocarcinoma A549 cells has been investigated. It was found that synchronous exposure to two types of radiation contributed to a stronger decrease in the survival rate of tumor cells than their sequential use or each type of radiation separately. The levels of RNA and expression of a number of genes involved in cell cycle control (p21 and DINOL), apoptosis (BAX and PUMA) and DNA repair (PARP1, OGG1, Rad51, and Lig4) were determined for various combinations of these two types of irradiations of cells. The highest level of expression under all treatments was observed for the long noncoding RNA of DINOL gene. The detected increase in the expression of the BAX and PUMA genes indicated the development of apoptosis. The results we obtained confirmed the synergism of radiation and photodynamic therapy upon their simultaneous use.

摘要 研究了在人类肺腺癌 A549 细胞模型上联合使用 X 射线照射和光动力疗法的情况。研究发现,两种辐射的同步照射比它们的顺序使用或每种辐射的单独使用能更有效地降低肿瘤细胞的存活率。研究人员测定了两种辐照不同组合的细胞中涉及细胞周期控制(p21 和 DINOL)、细胞凋亡(BAX 和 PUMA)和 DNA 修复(PARP1、OGG1、Rad51 和 Lig4)的一些基因的 RNA 水平和表达情况。在所有处理中,DINOL 基因长非编码 RNA 的表达量最高。检测到的 BAX 和 PUMA 基因表达的增加表明细胞凋亡的发生。我们获得的结果证实了辐射和光动力疗法同时使用时的协同作用。
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引用次数: 0
Modeling the Critical Flicker Fusion Frequency in the Human Visual System 模拟人类视觉系统中的临界闪烁融合频率
IF 4.033 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-03-07 DOI: 10.1134/S0006350923050147
S. I. Lyapunov, I. I. Shoshina, I. S. Lyapunov

The temporal resolving power of the visual system is essential for the perception of the objective world. The lowest sampling rate of a sequence of images at which perception becomes fused is called the critical flicker fusion frequency (CFFF). A variety of experimental data on critical frequency thresholds can be explained from the viewpoint of a model of the contrast sensitivity of the visual system that is based on the tremor modulation signal (TMS). The model describes how the critical frequency depends on the stimulus brightness, adaptation brightness, and the duration and angular size of the stimulus. The model demonstrates that critical frequency values lie in a range up to 1000 Hz for bright stimuli of a short duration and a large angular size, that a frame rate of 300–500 Hz should be considered optimal for the visual system, and that the critical frequency lies in a low-frequency region for small-sized angular stimuli. Differences in the rate of flicker fusion can be explained by temporal sensitivity of magnocellular and parvocellular neurons.

摘要 视觉系统的时间分辨能力对于感知客观世界至关重要。能使感知融合的图像序列的最低采样率被称为临界闪烁融合频率(CFFF)。关于临界频率阈值的各种实验数据可以从视觉系统对比敏感度模型的角度来解释,该模型基于震颤调制信号(TMS)。该模型描述了临界频率如何取决于刺激亮度、适应亮度以及刺激的持续时间和角度大小。该模型表明,对于持续时间短、角度大的明亮刺激物,临界频率值的范围可达 1000 赫兹;对于视觉系统来说,300-500 赫兹的帧频应被视为最佳频率;而对于小角度刺激物,临界频率则位于低频区域。闪烁融合率的差异可以用大细胞神经元和副细胞神经元的时间敏感性来解释。
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引用次数: 0
On the Illusion of Flying in Dreams: The Mechanism of its Occurrence 论梦中飞翔的幻觉:梦中飞行的机制
IF 4.033 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-03-07 DOI: 10.1134/S0006350923050111
G. R. Ivanitskii

It is shown that there is no need to resort to exoteric hypotheses to explain flight in a dream. From the standpoint of biophysics, the phenomenon of “flying in a dream” is based on the already studied adaptive mechanisms and circadian rhythms of the human body. During sleep, the brain’s excitation thresholds change; this makes it easier in some brain areas to excite weak signals. One of the mechanisms of such excitation occurs when a person changes his posture during sleep, which is perceived by the brain in the rapid eye movement sleep phase as a decrease in body weight. This, under certain conditions, can contribute to the appearance in the brain of the illusion of flight.

摘要 本文证明,无需借助外来假说来解释梦中飞行。从生物物理学的角度来看,"梦中飞行 "现象是基于已经研究过的人体适应机制和昼夜节律。在睡眠过程中,大脑的兴奋阈值会发生变化;这使得某些脑区更容易激发微弱的信号。这种兴奋的机制之一是人在睡眠中改变姿势时,大脑在快速眼动睡眠阶段将其感知为体重的减轻。在某些条件下,这会导致大脑出现飞行幻觉。
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引用次数: 0
Analysis of the Secondary Structure of Chromatin Linker Proteins HMGB1 and H1 and their Complexes 染色质连接蛋白 HMGB1 和 H1 及其复合物的二级结构分析
IF 4.033 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-03-07 DOI: 10.1134/S0006350923050081
E. V. Chikhirzhina, A. M. Polyanichko

The nonhistone chromosomal protein HMGB1 and histone H1 are chromatin linker proteins. The functions of linker proteins are closely related to their conformational state. The structure of proteins that play a key role in the formation of higher levels of chromatin structural organization is being actively studied. In this study, a comparative analysis of the secondary structure of the linker histone H1 and the nonhistone protein HMGB1 was carried out. Using circular dichroism in the UV region and FTIR spectroscopy, it was shown that positively charged histone H1 binds to the C-terminal fragment of HMGB1, stabilizing the resulting complex and inducing the formation of additional α-helical regions in both proteins.

摘要 非组蛋白染色体蛋白HMGB1和组蛋白H1是染色质连接蛋白。连接蛋白的功能与其构象状态密切相关。在染色质高级结构组织形成过程中起关键作用的蛋白质的结构正在被积极研究。本研究对连接蛋白组蛋白 H1 和非组蛋白 HMGB1 的二级结构进行了比较分析。利用紫外区的圆二色性和傅立叶变换红外光谱,研究表明,带正电荷的组蛋白 H1 与 HMGB1 的 C 端片段结合,稳定了由此产生的复合物,并促使两种蛋白质形成额外的 α 螺旋区域。
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引用次数: 0
The Complex System of the Mouse Brain: Selection for Successful Solution of a Cognitive Test 小鼠大脑的复杂系统:成功完成认知测试的选择
IF 4.033 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-03-07 DOI: 10.1134/S0006350923050238
I. I. Poletaeva, O. V. Perepelkina, Z. A. Zorina

This study provides a review of experimental research on selection in mice, which yielded positive results. The selection of mice was high (the task required mice to understand that an object that has become invisible still exists and can be found) and poor performance occurred in a cognitive test. The results we obtained revealed better short term memory in mice selected for high performance scores and that these mice also had higher performance in tests for novelty and attention. This suggests that differences between the mice used in the experiment are associated not only with cognitive abilities in tests, but also with more pronounced “executive functions.”

摘要 本研究综述了关于小鼠选择的实验研究,取得了积极的成果。小鼠的选择率很高(任务要求小鼠理解已经隐形的物体仍然存在并能被找到),而在认知测试中表现不佳。我们获得的结果显示,被选中的高分小鼠的短期记忆力更好,而且这些小鼠在新奇感和注意力测试中的表现也更出色。这表明,实验中使用的小鼠之间的差异不仅与测试中的认知能力有关,还与更明显的 "执行功能 "有关。
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引用次数: 0
Deep Hypothermia Inverts the Inotropic Effect of Isoproterenol in the Rat Myocardium 深度低温会削弱异丙肾上腺素对大鼠心肌的肌力作用
IF 4.033 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-03-07 DOI: 10.1134/S0006350923050251
C. V. Samodurova, F. V. Turin, A. S. Averin

The effects of the β-adrenergic receptor agonist isoproterenol on the contractile activity of the papillary muscle of the rat heart right ventricle were studied both at a temperature close to physiological (30°C) and under conditions of deep hypothermia (10°C). Isoproterenol had a pronounced positive inotropic effect at 30°C, the contraction force increased from 1.2 ± 0.1 mN in the control to 2.4 ± 0.4 mN after the addition of the agonist and there was a significant acceleration of the time parameters of contraction, that is, the time to reach the maximum contraction decreased from 101 ± 6 ms to 85 ± 4 ms; the relaxation time decreased by 50% from 55 ± 3 ms to 36 ± 1 ms. Under hypothermic conditions, isoproterenol caused a powerful negative inotropic effect, reducing the contraction force from 2.2 ± 0.4 mN to 1.2 ± 0.4 mN. The tendency to accelerate contraction persisted as at 30°C: the time to reach the maximum contraction decreased from 717 ± 52 ms to 624 ± 50 ms, and the relaxation time decreased by 50% from 667 ± 86 ms to 450 ± 40 ms. Thus, under conditions of deep hypothermia at 10°C, the direction of the inotropic response to isoproterenol changed from positive to negative, while the lusitropic effect remained negative.

摘要 研究了β-肾上腺素能受体激动剂异丙肾上腺素在接近生理温度(30℃)和深度低温(10℃)条件下对大鼠心脏右心室乳头肌收缩活动的影响。在 30°C 时,异丙肾上腺素具有明显的正性肌力作用,加入激动剂后,收缩力从对照组的 1.2 ± 0.1 mN 增加到 2.4 ± 0.4 mN,收缩的时间参数显著加快,即达到最大收缩力的时间从 101 ± 6 ms 减少到 85 ± 4 ms;松弛时间减少了 50%,从 55 ± 3 ms 减少到 36 ± 1 ms。在低体温条件下,异丙肾上腺素产生了强大的负性肌力作用,使收缩力从 2.2 ± 0.4 mN 降至 1.2 ± 0.4 mN。与 30°C 时一样,加速收缩的趋势依然存在:达到最大收缩力的时间从 717 ± 52 毫秒减少到 624 ± 50 毫秒,松弛时间减少了 50%,从 667 ± 86 毫秒减少到 450 ± 40 毫秒。因此,在10°C深度低温条件下,异丙托肾上腺素的肌力反应方向由正转负,而肌松效应仍为负。
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引用次数: 0
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