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Hydrogen Sulfide Caused a Modification in the Structure of Mitochondrial Membranes of Epicotyls of Pea Pisum sativum L. Seedlings under Water Stress 硫化氢导致水分胁迫下豌豆幼苗外胚叶线粒体膜结构的改变
IF 4.033 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-09-27 DOI: 10.1134/S0006350924700283
N. Yu. Gerasimov, O. V. Nevrova, I. V. Zhigacheva, I. P. Generozova, A. N. Goloshchapov

The change in the structural characteristics of mitochondrial membranes isolated from epicotyls of Nemchinovsky 100 pea seedlings under the effect of sodium hydrosulfide at various concentrations has been studied. It was shown that seed treatment with sodium hydrosulfide solution at doses of 2 × 10–4 M and 5 × 10–6 M caused a shift of thermally induced structural transitions in mitochondrial membranes to lower temperatures and to an increase in the microviscosity of both lipid and protein regions of mitochondrial membranes with a decrease in their crystallinity. The presence of exogenous NaHS, as well as endogenous hydrogen sulfide, could increase the activity of antioxidant defense enzymes and caused the accumulation of osmolytes. As a result, the microviscosity of the lipid bilayer could increase. To test this hypothesis, the effect of the antioxidant resveratrol on the microviscosity of the mitochondrial lipid bilayer of epicotyles of pea seedlings was studied with both untreated and pretreated with NaHS seeds. The bioenergetic characteristics of mitochondria were also studied. Data have been obtained that confirm the effect of hydrogen sulfide on the structural characteristics of mitochondrial membranes by activating enzymes of antioxidant protection and accumulation of osmolytes.

研究人员研究了在不同浓度的硫氢化钠作用下,从 Nemchinovsky 100 豌豆幼苗的外胚叶中分离出的线粒体膜的结构特征变化。结果表明,用剂量为 2 × 10-4 M 和 5 × 10-6 M 的硫氢化钠溶液处理种子会导致线粒体膜的热诱导结构转变向低温转移,线粒体膜脂质和蛋白质区域的微粘度增加,结晶度降低。外源 NaHS 和内源硫化氢的存在可提高抗氧化防御酶的活性,并导致渗透溶质的积累。因此,脂质双分子层的微粘度可能会增加。为了验证这一假设,研究了抗氧化剂白藜芦醇对未经处理和预处理过 NaHS 种子的豌豆幼苗外胚层线粒体脂质双分子层微粘度的影响。还研究了线粒体的生物能特征。获得的数据证实,硫化氢通过激活抗氧化保护酶和积累渗透溶质,对线粒体膜的结构特征产生了影响。
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引用次数: 0
The Relationship between Geophysical Rhythms and Human Blood Pressure and Heart Rate: A Case Study 地球物理节律与人体血压和心率之间的关系:案例研究
IF 4.033 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-09-27 DOI: 10.1134/S0006350924700404
P. D. Kovalev, D. P. Kovalev

The results of the analysis of time series for 5 years of observations of geophysical (ecological) rhythms, atmospheric pressure, and geomagnetic activity, were considered and their effect on human blood pressure and heart rate for time periods of fluctuations more than daily was assessed. It was found that during periods of about 15 days, when atmospheric pressure changed smoothly and slightly, a calmer heart rate and fluctuations in blood pressure were observed. Such “calm” periods of time were observed mainly in the summer months from July to August, usually only once per season. A comparison of the graphs of fluctuations in systolic pressure and the geomagnetic activity index showed a correlation between them three times higher than the correlation between systolic pressure and atmospheric pressure. This means that a geomagnetic field with an activity index of more than 2 had a greater effect on increasing systolic pressure in humans. The analysis also showed that the periods of peaks in the atmospheric pressure spectra were in good agreement with the periods of heart rate rhythms. The result indicates that these rhythms in humans might be affected by synoptic processes passing through the region in the atmosphere such as cyclones and anticyclones; ultimately, the well-being of elderly and sick people might depend on them. This study, as well as taking the variability of geophysical parameters published by hydrometeorological services into account, makes it possible to predict the state of human health.

考虑了对地球物理(生态)节律、大气压力和地磁活动 5 年观测时间序列的分析结果,并评估了它们在超过每日波动的时间段内对人体血压和心率的影响。结果发现,在大约 15 天的时间里,当大气压力发生平稳而轻微的变化时,心率和血压的波动会比较平静。这种 "平静 "时段主要出现在夏季的 7 月至 8 月,通常每个季节只有一次。收缩压波动图与地磁活动指数的比较显示,两者之间的相关性比收缩压与大气压之间的相关性高三倍。这意味着活动指数大于 2 的地磁场对人体收缩压的升高有更大的影响。分析还显示,大气压力频谱的峰值周期与心率节律周期非常吻合。结果表明,人类的这些节律可能会受到经过该区域的大气中的气旋和反气旋等同步过程的影响;最终,老年人和病人的健康可能取决于这些节律。这项研究,以及将水文气象部门公布的地球物理参数的变化纳入考虑,使得预测人类健康状况成为可能。
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引用次数: 0
The Distribution of the GC Content in the Spatial Structure of the Fragments of Mitochondrial, Chloroplast, and Bacterial Genomes 线粒体、叶绿体和细菌基因组片段空间结构中 GC 含量的分布
IF 4.033 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-09-27 DOI: 10.1134/S0006350924700234
M. Yu. Senashova, M. G. Sadovsky

The spatial distribution of GC content of fragments of the genomes of chloroplasts, mitochondria and bacteria was considered. It was found that the GC content of fragments of most genomes were distributed not chaotically, but in an orderly manner. Two principal types of distribution were found, gradient and centrally symmetric. Chloroplast genomes had only a gradient distribution. Bacteria had a centrally symmetric distribution for GC-poor genomes, and a gradient distribution for GC-rich ones. Both types of distributions occurred in mitochondria; the type of distribution depended on the type of organism.

对叶绿体、线粒体和细菌基因组片段的 GC 含量的空间分布进行了研究。研究发现,大多数基因组片段的 GC 含量并非无序分布,而是有序分布。发现了两种主要的分布类型,即梯度分布和中心对称分布。叶绿体基因组只有梯度分布。细菌的 GC 贫乏基因组呈中心对称分布,而 GC 丰富的基因组呈梯度分布。两种类型的分布都出现在线粒体中;分布类型取决于生物体的类型。
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引用次数: 0
A Study of the Survival of Tumor A549 Cells upon Proton Beam Irradiation in Flash and Standard Modes 质子束以闪光和标准模式照射 A549 肿瘤细胞时的存活率研究
IF 4.033 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-09-27 DOI: 10.1134/S0006350924700349
A. V. Rzyanina, G. V. Mytsin, A. V. Agapov, E. A. Gritskova, S. S. Uglova, V. N. Gaevsky, K. N. Shipulin, I. Khassenova

Flash irradiation is an innovative method of therapy, which ensures that the therapeutic dose is brought to the pathological focus in times of the order of several tens of milliseconds. In this mode of irradiation, the degree of damage to normal tissues surrounding the tumor that fall under the influence of radiation decreases; at the same time, the effect on cancer cells remains at almost the same level, which improves the prospect of local control of the tumor with a lower frequency of side effects. The exact radiobiological mechanisms underlying the flash effect are not completely clear. This paper presents the results of work on the formation of a high-intensity proton beam with an energy of 660 MeV from the phasotron accelerator of the Joint Institute for Nuclear Research (Dubna), designed to conduct radiobiological studies of flash irradiation therapy on cell cultures and small laboratory animals (mice and rats). The survival rate of A549 cells under proton beam irradiation in flash and standard modes was compared. A difference was found in the change in the survival rate of A549 cells irradiated in flash and standard modes. The magnitude of the flash effect was represented by the dose change factor.

闪光照射是一种创新的治疗方法,它能确保在几十毫秒的时间内将治疗剂量送达病灶。在这种辐照模式下,肿瘤周围正常组织受辐射影响的损伤程度会降低;与此同时,对癌细胞的影响几乎保持在同一水平,从而改善了肿瘤局部控制的前景,并降低了副作用的发生频率。闪光效应的确切放射生物学机制尚不完全清楚。本文介绍了从联合核研究所(杜布纳)的相控加速器中产生的能量为 660 兆电子伏特的高强度质子束的工作成果,旨在对细胞培养物和小型实验动物(小鼠和大鼠)进行闪光照射疗法的放射生物学研究。比较了质子束在闪光和标准模式下照射 A549 细胞的存活率。结果发现,在闪光模式和标准模式下照射的 A549 细胞存活率的变化存在差异。闪光效应的大小用剂量变化系数表示。
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引用次数: 0
Supercomputer Simulation of Intramolecular Oscillations of Glycine, Diphenylalanine, and Tryptophan in an Electric Field of the Terahertz and Infrared Ranges 太赫兹和红外范围电场中甘氨酸、二苯丙氨酸和色氨酸分子内振荡的超级计算机模拟
IF 4.033 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-09-27 DOI: 10.1134/S0006350924700209
M. A. Baranov, E. K. Karseeva, O. Yu. Tsybin

A method of nonequilibrium analysis of intramolecular oscillations of the amino acids glycine, phenylalanine, and tryptophan in an electric field of the terahertz and infrared ranges based on the calculation of amplitude-time realizations of the dipole moment and their Fourier frequency spectrum was implemented. Realizations lasting up to 2 ns were obtained by supercomputer modeling with a sampling step of 1 fs. The results showed the new possibilities of this method, which used an electric field modulated by a symmetrical meander for the first time. The fundamental concepts of the dynamic properties of biomolecules in external fields have been supplemented. The obtained data can be used in the development of nanobiotechnology, bioelectronic, and heterogeneous hybrid microelectronic devices with embedded biomolecular components.

在太赫兹和红外范围的电场中,对氨基酸甘氨酸、苯丙氨酸和色氨酸的分子内振荡进行非平衡分析的方法是基于偶极矩的振幅-时间实化及其傅里叶频谱的计算而实现的。通过超级计算机建模,以 1 fs 的采样步长获得了长达 2 ns 的实测值。结果表明,这种首次使用对称蜿蜒调制电场的方法具有新的可能性。补充了生物分子在外部场中动态特性的基本概念。获得的数据可用于开发嵌入生物分子元件的纳米生物技术、生物电子和异质混合微电子器件。
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引用次数: 0
Preservation of Hypotensive Activity in Freeze-Dried Drugs of Dinitrozyl Iron Complexes with Glutathione (Oxacom) Stored for 15 Years at Room Temperature 在室温下保存 15 年的二硝基苄基铁与谷胱甘肽络合物(Oxacom)冻干药物的降血压活性保存情况
IF 4.033 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-09-27 DOI: 10.1134/S0006350924700362
A. F. Vanin, A. A. Abramov, A. A. Timoshin, V. L. Lakomkin, N. A. Tkachev

Complete preservation of the antihypertensive activity of the freeze-dried drug Oxacom has been demonstrated after storing it for 15 years at room temperature in vessels with the air pumped out; this is due to the presence of a binuclear form of a dinitrosyl iron complex with glutathione in this drug. It was proposed that the oxidation of glutathione ligands in the composition of dinitrosyl iron complexes by air gradually penetrating into the vessels, which could lead to the decomposition of these complexes, was prevented by a significant amount of free (not included in dinitrosyl iron complexes) glutathione in this drug.

冷冻干燥药物 Oxacom 在室温下抽出空气后在容器中储存 15 年后,其抗高血压活性得以完全保 存;这是因为这种药物中存在二亚硝基铁与谷胱甘肽的双核形式络合物。有人提出,二亚硝基铁络合物成分中的谷胱甘肽配体被逐渐渗入容器的空气氧化,可能导致这些络合物的分解,而这种药物中大量的游离谷胱甘肽(不包括在二亚硝基铁络合物中)防止了这种氧化。
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引用次数: 0
Chlorophyllin Inhibits Lipid Peroxidation Triggered by the Fenton Reaction 叶绿素抑制芬顿反应引发的脂质过氧化反应
IF 4.033 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-07-04 DOI: 10.1134/S0006350924700015
L. A. Romodin

Using the Fenton reaction, a system has been modeled in which particles similar to those formed during the radiolysis of water were generated. The suppression of reactions caused by hydroxyl radicals formed in the system under the action of chlorophyllin is evaluated by the chemiluminescence method. It has been shown that sodium-copper chlorophyllin dose-dependently inhibits the chemiluminescence accompanying the phosphatidic acid peroxidation induced by the Fenton reaction. Based on this, it is concluded that copper chlorophyllin can inhibit the metabolism of lipid radiotoxins, lipid peroxidation (LP), caused by the attack of water radiolysis products on lipid molecules.

利用芬顿反应建立了一个系统模型,在该模型中产生了与水的辐射分解过程中形成的微粒相似的微粒。在叶绿素的作用下,通过化学发光法评估了系统中形成的羟自由基对反应的抑制作用。结果表明,叶绿素钠-铜对 Fenton 反应引起的磷脂酸过氧化反应所伴随的化学发光具有剂量依赖性的抑制作用。据此,可以得出结论,叶绿素铜可以抑制脂质放射性毒素的代谢,即脂质过氧化(LP),它是由水的放射性分解产物攻击脂质分子引起的。
{"title":"Chlorophyllin Inhibits Lipid Peroxidation Triggered by the Fenton Reaction","authors":"L. A. Romodin","doi":"10.1134/S0006350924700015","DOIUrl":"10.1134/S0006350924700015","url":null,"abstract":"<div><p>Using the Fenton reaction, a system has been modeled in which particles similar to those formed during the radiolysis of water were generated. The suppression of reactions caused by hydroxyl radicals formed in the system under the action of chlorophyllin is evaluated by the chemiluminescence method. It has been shown that sodium-copper chlorophyllin dose-dependently inhibits the chemiluminescence accompanying the phosphatidic acid peroxidation induced by the Fenton reaction. Based on this, it is concluded that copper chlorophyllin can inhibit the metabolism of lipid radiotoxins, lipid peroxidation (LP), caused by the attack of water radiolysis products on lipid molecules.</p></div>","PeriodicalId":493,"journal":{"name":"Biophysics","volume":"69 1","pages":"1 - 5"},"PeriodicalIF":4.033,"publicationDate":"2024-07-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141546578","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Secondary Metabolites and Amino Acids in the Neocortex of the Long-Tailed Ground Squirrel Urocitellus undulatus at Different Stages of Hibernation 冬眠不同阶段长尾地松鼠新皮层中的次生代谢物和氨基酸
IF 4.033 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-07-04 DOI: 10.1134/S0006350924700027
M. V. Karanova, N. M. Zakharova

This study continues our previous research aimed at investigating changes in the pools of amino acids in the myocardium of the ground squirrel during winter torpor. Neurochemical profiles of amino acids and the secondary metabolites (taurine, phosphoserine, and cysteic acid) were explored in the neocortex of the ground squirrel at different stages of torpor: in the beginning of torpor (2–3 days) and during prolonged torpor (9–10 days), as well as during short-term winter arousal (winter activity, euthermia). Reduced excitatory neurotransmitter levels (glutamate by 7% and 14%; aspartate by 25% and 52% in a coordinated manner and the increased level of GABA, the main transmission inhibitor (by 50% and 67%) were observed from the onset of the torpor entry and at the end of the torpor arousal, respectively. Alanine, which was formed in negligible amounts in the neocortex in the summer season, increased at the initial stage of hibernation and after multiday torpor bout (by 98% and 126%, respectively), indicating a partial switch to anaerobic glycolysis. Short-term interbout euthermia returned levels of these substances back to normal. The behavior of glutamate and aspartate, the anaplerotic substrates, that supported cycling of the tricarboxylic acid cycle during torpor and winter activity periods was like their responses in the myocardium, though differed quantitatively. The responses of the neuromodulators such as glycine, threonine, and lysine differed radically when compared to their responses in the myocardium. No changes in taurine and phosphoserine pools were detected, but the level of cysteic acid decreased compared to the summer control from 0.51 ± 0.06 μmol/g to 0.07 ± 0.01 μmol/g at the end of torpor, while during winter euthermia it became 2 times lower than the summer level. Our data suggest that metabolic pathways involving anaplerotic amino acids of the neocortex are more active than the myocardium during winter torpor, while the pools of neuromodulators that regulate inhibition processes, increase.

本研究延续了我们之前的研究,旨在研究冬眠期间地松鼠心肌中氨基酸池的变化。研究探讨了地松鼠在不同冬眠阶段(冬眠初期(2-3 天)、长期冬眠(9-10 天)以及短期冬季唤醒(冬季活动、呼热))的新皮层中氨基酸和次级代谢产物(牛磺酸、磷酸丝氨酸和半胱氨酸)的神经化学特征。在开始冬眠和冬眠唤醒结束时,分别观察到兴奋性神经递质水平降低(谷氨酸分别降低了7%和14%;天冬氨酸分别降低了25%和52%)和主要传导抑制剂GABA水平升高(分别降低了50%和67%)。夏季在新皮层中形成的丙氨酸含量微乎其微,但在冬眠初期和多日冬眠后,丙氨酸含量有所增加(分别增加了98%和126%),这表明部分冬眠转为无氧糖酵解。短期间歇性热休眠使这些物质的水平恢复正常。谷氨酸和天门冬氨酸是无氧底物,它们在冬眠和冬季活动期间支持三羧酸循环,其行为与它们在心肌中的反应相似,但在数量上有所不同。神经调节剂(如甘氨酸、苏氨酸和赖氨酸)的反应与它们在心肌中的反应截然不同。牛磺酸和磷酸丝氨酸池未检测到变化,但半胱氨酸的水平与夏季对照组相比有所下降,在冬眠结束时从 0.51 ± 0.06 μmol/g 降至 0.07 ± 0.01 μmol/g,而在冬季呼热时,半胱氨酸的水平比夏季水平低 2 倍。我们的数据表明,在冬眠期间,涉及新皮层无性氨基酸的代谢途径比心肌更活跃,而调节抑制过程的神经调节剂池则有所增加。
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引用次数: 0
Superoxide Generating Activity of Nicotinamide Coenzymes 烟酰胺辅酶的超氧化物生成活性
IF 4.033 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-07-04 DOI: 10.1134/S0006350924700039
T. V. Sirota

It has been shown that nicotinamide coenzymes (NADPH, NADH, NADP+, and NAD+) are capable of generating superoxide anions (({text{O}}_{2}^{{ - ,bullet }})) in an alkaline environment. The superoxide-generating activity of the coenzymes is associated with high pH values and is sensitive to SOD. However, nicotinamide itself, being a functional part of coenzyme molecules, does not have this property. Polarographic studies showed that in the presence of coenzymes, molecular oxygen is consumed from the buffer, namely oxygen activation occurs due to the formation of ({text{O}}_{2}^{{ - ,bullet }}). Based on the obtained results and in accordance with the literature, our observations suggest that the formation of adducts of nicotinamide, which is part of the coenzyme molecule, and hydroxyl anions (OH) may lead to the formation of ({text{O}}_{2}^{{ - ,bullet }}). Under mild conditions in the organism, the studied coenzymes, while performing their main functions, are expected to generate superoxide, meaning that they can be signaling molecules.

研究表明,烟酰胺辅酶(NADPH、NADH、NADP+ 和 NAD+)能够在碱性环境中生成超氧阴离子(({text{O}}_{2}^{-,bullet }})。辅酶的超氧化物生成活性与高 pH 值有关,并且对 SOD 敏感。然而,烟酰胺本身作为辅酶分子的功能部分,并不具有这种特性。极谱研究表明,在辅酶存在的情况下,缓冲液中的分子氧被消耗,即由于形成了 ({text{O}}_{2}^{{ - ,bullet }}) 而发生氧活化。根据所获得的结果和文献,我们的观察结果表明,作为辅酶分子一部分的烟酰胺与羟基阴离子(OH-)形成的加合物可能会导致形成({text{O}}_{2}^{ -bullet }})。在生物体内的温和条件下,所研究的辅酶在发挥其主要功能的同时,也会产生超氧化物,这意味着它们可以成为信号分子。
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引用次数: 0
Morphometric Analysis of Serotoninergic Structures in the Nervous System of the Planarian Schmidtea mediterranea 地中海栉水母神经系统中羟色胺能结构的形态计量分析
IF 4.033 Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-07-04 DOI: 10.1134/S0006350924700088
G. V. Kuznetsov, D. E. Mitkovskii, N. D. Kreshchenko

The planarian nervous system is represented by a cephalic ganglion in the anterior part of the body and a pair of well-defined ventral nerve trunks extending along the entire body of the animal. The serotoninergic components of the nervous system are determined by the indirect immunocytochemical staining of the total preparations of the planarian Schmidtea mediterranea tissues, followed by analysis by fluorescent microscopy. The presence of serotoninergic components is found in the central and peripheral parts of the nervous system of the planarian S. mediterranea. The morphological parameters of serotonin-immunopositive structures are measured and the number of neurons in the cerebral ganglion is counted. The measurements are carried out on micrographs from stained total preparations obtained using a digital camera. The size of serotonin neurons in three areas of the body, the thickness of nerve trunks and cerebral ganglion, and the distance between nerve trunks and commissures are considered. For the first time, new quantitative data characterizing the morphological properties of the nervous system of the planarian S. mediterranea have been obtained. The regeneration of planarian eyes after decapitation and serotonin exposure is also studied. It is found that exogenous serotonin at a concentration of 0.01–1 μM accelerated eye differentiation during regeneration of the head end of S. mediterranea.

刨腹鱼的神经系统由位于身体前部的头神经节和一对沿着整个身体延伸的清晰的腹神经干组成。神经系统中的血清素能成分是通过间接免疫细胞化学染色刨腹鱼组织总制备物,然后用荧光显微镜分析确定的。在刨腹鱼神经系统的中枢和外周部分发现了血清素能成分。对血清素免疫阳性结构的形态参数进行了测量,并计算了脑神经节中神经元的数量。测量是在使用数码相机获得的染色总制备物的显微照片上进行的。研究考虑了身体三个区域中血清素神经元的大小、神经干和大脑神经节的厚度以及神经干和神经丘之间的距离。首次获得了表征地中海鳞栉蜥神经系统形态特性的新定量数据。此外,还研究了斩首和血清素暴露后刨食动物眼睛的再生情况。研究发现,浓度为 0.01-1 μM 的外源血清素可加速中栉水母头端再生过程中的眼睛分化。
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引用次数: 0
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