Pub Date : 2025-12-14DOI: 10.1186/s13068-025-02723-5
Chaozhi Wang, Chunyang Zhou, Yazheng Cao, Mohd Sadeeq, Ke Yu, Feifei Hou, Peng Xiong
Sophorolipids (SLs) are glycolipid biosurfactants produced by non-pathogenic yeasts and represent a sustainable, biocompatible alternative to synthetic surfactants. Their amphiphilic architecture—comprising a hydrophilic sophorose headgroup and a hydrophobic fatty acid tail—confers excellent surface activity, emulsifying capacity, and a broad spectrum of biological effects. This review synthesizes advances since 2020 in understanding SL bioactivities, including antibacterial, antifungal, antibiofilm, antiviral, anti-inflammatory, antioxidant, and anticancer effects. We examine structure–activity relationships that govern functionality and survey strategies to enhance efficacy, such as chemical modification to generate novel derivatives and incorporation into nanostructures for targeted delivery. The review also evaluates application potential across sectors—agriculture (biopesticides, soil amendments), food (emulsifiers, preservatives), healthcare (therapeutics, coatings), and environmental remediation (oil and heavy-metal removal). Despite promising developments, challenges remain in production scaling, mechanistic clarity, and comprehensive characterization of novel SL. Addressing these issues will facilitate the integration of SLs into sustainable, high-value bioproducts aligned with green chemistry principles.
{"title":"Sophorolipids: multifunctional microbial glycolipids with diverse bioactivities and applications","authors":"Chaozhi Wang, Chunyang Zhou, Yazheng Cao, Mohd Sadeeq, Ke Yu, Feifei Hou, Peng Xiong","doi":"10.1186/s13068-025-02723-5","DOIUrl":"10.1186/s13068-025-02723-5","url":null,"abstract":"<div><p>Sophorolipids (SLs) are glycolipid biosurfactants produced by non-pathogenic yeasts and represent a sustainable, biocompatible alternative to synthetic surfactants. Their amphiphilic architecture—comprising a hydrophilic sophorose headgroup and a hydrophobic fatty acid tail—confers excellent surface activity, emulsifying capacity, and a broad spectrum of biological effects. This review synthesizes advances since 2020 in understanding SL bioactivities, including antibacterial, antifungal, antibiofilm, antiviral, anti-inflammatory, antioxidant, and anticancer effects. We examine structure–activity relationships that govern functionality and survey strategies to enhance efficacy, such as chemical modification to generate novel derivatives and incorporation into nanostructures for targeted delivery. The review also evaluates application potential across sectors—agriculture (biopesticides, soil amendments), food (emulsifiers, preservatives), healthcare (therapeutics, coatings), and environmental remediation (oil and heavy-metal removal). Despite promising developments, challenges remain in production scaling, mechanistic clarity, and comprehensive characterization of novel SL. Addressing these issues will facilitate the integration of SLs into sustainable, high-value bioproducts aligned with green chemistry principles.</p><h3>Graphical Abstract</h3><div><figure><div><div><picture><source><img></source></picture></div></div></figure></div></div>","PeriodicalId":494,"journal":{"name":"Biotechnology for Biofuels","volume":"19 1","pages":""},"PeriodicalIF":6.1,"publicationDate":"2025-12-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1186/s13068-025-02723-5.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145758762","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Hydrocarbon-based biofuels, known as drop-in fuels, which are chemically similar to petroleum, have gained significant attention. Microorganisms that produce medium-chain alkanes hold promise for the bioproduction of drop-in fuels. Previous studies identified Klebsiella sp. NBRC100048 as having aldehyde-decarbonylating activity, enabling it to convert aldehydes into alkanes. Using a genomic fosmid library from Klebsiella sp. NBRC100048, we identified open reading frame 2991 (orf2991), which catalyzes the conversion of tetradecanal to tridecane. This gene shares high sequence similarity with the aldehyde dehydrogenase (ALDH) family in Escherichia coli.
Results
ALDH homolog genes from Klebsiella sp. NBRC100048 and E. coli W3110 were cloned and expressed in E. coli to assess their potential alkane-synthesizing activity. Approximately one-fifth of the tested enzymes exhibited this function, with basic local alignment search tool (BLAST) analysis classifying them under the phenylacetaldehyde dehydrogenase, succinate-semialdehyde dehydrogenase, or aldehyde dehydrogenase B families. Testing additional ALDH homologs from diverse organisms—bacteria, fungi, plants, and animals—revealed that ALDHs with alkane-synthesizing activity are widespread, occurring in Gram-positive bacteria, actinomycetes, lactic acid bacteria, and yeast species. Alkane-synthesizing activity was observed with resting cells and cell-free extracts of the E. coli transformants expressing ALDH (ORF2991) from Klebsiella sp. NBRC100048 with aldehyde as the substrate in the presence of NADH. However, under the tested conditions, the purified enzyme alone did not show detectable decarbonylase activity. These results suggest that additional cellular components, cofactors, or specific conditions may be required for the purified enzyme to exhibit the activity.
Conclusions
We cloned several aldehyde dehydrogenases (ALDHs) from bacteria and yeast that have aldehyde decarbonylase activity to convert aldehydes to alkanes. Alkane-synthesizing activity was observed through the assays using resting cells and cell-free extracts of the E. coli transformants expressing ALDH. This novel function of aldehyde dehydrogenase introduces a new pathway for hydrocarbon fuel production and offers novel insights into microbial processes that may explain the natural origins of petroleum.
{"title":"Taxonomic distribution of alkane synthesizing aldehyde dehydrogenases across bacteria, fungi, plants, and animals","authors":"Masakazu Ito, Yu-An Sui, Natsumi Okada, Nahoko Kitamura, Shigenobu Kishino, Masayoshi Muramatsu, Jun Ogawa","doi":"10.1186/s13068-025-02721-7","DOIUrl":"10.1186/s13068-025-02721-7","url":null,"abstract":"<div><h3>Background</h3><p>Hydrocarbon-based biofuels, known as drop-in fuels, which are chemically similar to petroleum, have gained significant attention. Microorganisms that produce medium-chain alkanes hold promise for the bioproduction of drop-in fuels. Previous studies identified <i>Klebsiella</i> sp. NBRC100048 as having aldehyde-decarbonylating activity, enabling it to convert aldehydes into alkanes. Using a genomic fosmid library from <i>Klebsiella</i> sp. NBRC100048, we identified open reading frame 2991 (<i>orf2991</i>), which catalyzes the conversion of tetradecanal to tridecane. This gene shares high sequence similarity with the aldehyde dehydrogenase (ALDH) family in <i>Escherichia coli</i>.</p><h3>Results</h3><p>ALDH homolog genes from <i>Klebsiella</i> sp. NBRC100048 and <i>E. coli</i> W3110 were cloned and expressed in <i>E. coli</i> to assess their potential alkane-synthesizing activity. Approximately one-fifth of the tested enzymes exhibited this function, with basic local alignment search tool (BLAST) analysis classifying them under the phenylacetaldehyde dehydrogenase, succinate-semialdehyde dehydrogenase, or aldehyde dehydrogenase B families. Testing additional ALDH homologs from diverse organisms—bacteria, fungi, plants, and animals—revealed that ALDHs with alkane-synthesizing activity are widespread, occurring in Gram-positive bacteria, actinomycetes, lactic acid bacteria, and yeast species. Alkane-synthesizing activity was observed with resting cells and cell-free extracts of the <i>E. coli</i> transformants expressing ALDH (ORF2991) from <i>Klebsiella</i> sp. NBRC100048 with aldehyde as the substrate in the presence of NADH. However, under the tested conditions, the purified enzyme alone did not show detectable decarbonylase activity. These results suggest that additional cellular components, cofactors, or specific conditions may be required for the purified enzyme to exhibit the activity.</p><h3>Conclusions</h3><p>We cloned several aldehyde dehydrogenases (ALDHs) from bacteria and yeast that have aldehyde decarbonylase activity to convert aldehydes to alkanes. Alkane-synthesizing activity was observed through the assays using resting cells and cell-free extracts of the <i>E. coli</i> transformants expressing ALDH. This novel function of aldehyde dehydrogenase introduces a new pathway for hydrocarbon fuel production and offers novel insights into microbial processes that may explain the natural origins of petroleum.</p></div>","PeriodicalId":494,"journal":{"name":"Biotechnology for Biofuels","volume":"19 1","pages":""},"PeriodicalIF":6.1,"publicationDate":"2025-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12817483/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145746056","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-05DOI: 10.1186/s13068-025-02710-w
S. Sudalai, V. Varalakksmi, S. Rahul, B. G. Yogeswaran, S. Prabakaran, A. Arumugam, Akhilesh Kumar Yadav
Ceiba pentandra (Kapok) has gained significant attention as a promising non-edible feedstock for biodiesel production, offering a sustainable alternative to traditional fossil fuels. The review provides a comprehensive analysis of the potential of Ceiba pentandra as an efficient biodiesel producer, including various aspects of cultivation, oil extraction, conversion processes, and future development. A scientometric analysis highlights the growing research interest in this area, while the geographical distribution and requirements of the plant site are discussed to illustrate its global availability. The review also discusses Ceiba pentandra’s adaptability and growth potential in diverse environments, its oil extraction methodologies, and its suitability for biodiesel production. It evaluates various techniques, examines their efficiency, and analyzes the effects on engine performance. The economic feasibility analysis assesses commercial potential and its role in sustainable development. Furthermore, the role of Ceiba pentandra in supporting Sustainable Development Goals (SDGs), such as clean energy and climate action, is explored. Current industry developments and future prospects, including advances in conversion technologies and supply chain optimization, are discussed. The review highlights the need for continued research and investment to realize Ceiba pentandra’s potential as a sustainable biodiesel source.