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An improved method for edge detection based on neighbor distance for processing hemispheric photography in studying canopy structure and radiative transfer 基于邻距的边缘检测改进方法,用于处理半球摄影,研究冠层结构和辐射传递
IF 2.7 2区 环境科学与生态学 Q2 Agricultural and Biological Sciences Pub Date : 2024-03-30 DOI: 10.1093/jpe/rtae022
Yasi Liu, Dayong Fan, Han Sun, Xiangping Wang
Hemisphere photos are now widely applied to provide information about solar radiation dynamics, canopy structure and their contribution to biophysical processes, plant productivity and ecosystem properties. The present study aims to improve the original “edge detection” method for binary classification between sky and canopy, which works not well for closed canopies. We supposed such inaccuracy probably is due to the influence of sky pixels on their neighbor canopy pixels. Here we introduced a new term “neighbor distance”, defined as the distance between pixels participated in the calculation of contrast at the edges between classified canopy and sky, into the “edge detection” method. We showed that choosing a suitable neighbor distance for a photo with specific gap fraction can significantly improve the accuracy of the original “edge detection” method. Combining the modified “edge detection” method and an iterative selection method, with the aid of an empirical power function for the relationship between neighbor distance and manually verified gap fraction, we developed a ND-IS (Neighbor Distance-Iteration Selection) method that can automatically determine the threshold values of hemisphere photos with high accuracy and reproductivity. This procedure worked well throughout a broad range of gap fraction (0.019 to 0.945) with different canopy composition and structure, in five forest biomes along a broad gradient of latitude and longitude across Eastern China. Our results highlight the necessity of integrating neighbor distance into the original “edge detection” algorithm. The advantages and limitations of the method, and the application of the method in the field were also discussed.
半球照片目前被广泛应用于提供有关太阳辐射动态、树冠结构及其对生物物理过程、植物生产力和生态系统特性的贡献的信息。本研究旨在改进原有的 "边缘检测 "方法,对天空和树冠进行二元分类。我们认为这种不准确性可能是由于天空像素对其相邻冠层像素的影响。在此,我们在 "边缘检测 "方法中引入了一个新术语 "邻距",即参与计算已分类的树冠和天空边缘对比度的像素之间的距离。我们的研究表明,为具有特定间隙分数的照片选择合适的邻距可以显著提高原始 "边缘检测 "方法的准确性。我们将改进后的 "边缘检测 "方法与迭代选择方法相结合,并借助邻距与人工验证的间隙分数之间关系的经验幂函数,开发了一种 ND-IS(邻距-迭代选择)方法,该方法可自动确定半球照片的阈值,准确性和再现性都很高。该方法在华东地区经纬度梯度较大的五个森林生物群落中,在不同冠层组成和结构的较大间隙率范围(0.019 至 0.945)内都能很好地发挥作用。我们的结果凸显了将邻近距离纳入原始 "边缘检测 "算法的必要性。此外,还讨论了该方法的优势和局限性,以及该方法在野外的应用。
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引用次数: 0
Publication-level analysis of Journal of Plant Ecology during 2018–2022 2018-2022年《植物生态学杂志》出版层面分析
IF 2.7 2区 环境科学与生态学 Q2 Agricultural and Biological Sciences Pub Date : 2024-03-28 DOI: 10.1093/jpe/rtad046
Yu Liao, Pu Wang, Lijuan Liu, Wen-Hao Zhang
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引用次数: 0
Effects and driving factors of domestic sewage from different sources on nitrous oxide emissions in a bog 不同来源的生活污水对沼泽地氧化亚氮排放的影响和驱动因素
IF 2.7 2区 环境科学与生态学 Q2 Agricultural and Biological Sciences Pub Date : 2024-03-26 DOI: 10.1093/jpe/rtae020
Yue Li, Zhongbing Chen, Xue Wang, Haibo Jiang, Chunguang He, Yao Shi, Lianxi Sheng
Direct sewage discharge may enhance soil nitrous oxide (N2O) emissions, worsening the greenhouse effect. However, the effects of sewage discharge into bogs on N2O flux, drivers, and influencing mechanisms remain unclear. Additionally, investigating the impact of reclaimed water on N2O flux is important for bog replenishment and water shortage alleviation. This study simulated sewage from different sources into a bog and analyzed N2O fluxes, soil (organic carbon, total nitrogen, ammonium nitrogen, nitrate nitrogen, total phosphorus, available phosphorus, pH, and electrical conductivity), plant (species richness and biomass), and microorganisms (ammonia-oxidizing archaea, napA, nirS, nirK, and nosZ genes). Results showed that the reclaimed water did not significantly change N2O flux, while 50% tap water mixed with 50% domestic sewage and domestic sewage significantly increased the N2O flux. Among soil factors, available nitrogen and pH were key in influencing N2O flux. Among plant parameters, species richness was the primary factor affecting N2O flux. Nitrogen transformation functional genes contributed the most to the increase in the N2O fluxes, with an increase in domestic sewage input leading to a higher abundance of these genes and subsequent N2O emissions. Therefore, domestic sewage should be considered, as it significantly increases N2O emissions by affecting the soil, plants, and microorganisms, thereby increasing the global warming potential. This study's findings suggest that using treated reclaimed water for bog replenishment could be an environmentally friendly approach to wetland management.
污水直接排放可能会增加土壤中一氧化二氮(N2O)的排放量,从而加剧温室效应。然而,向沼泽排放污水对氧化亚氮通量的影响、驱动因素和影响机制仍不清楚。此外,研究再生水对 N2O 通量的影响对于沼泽补水和缓解水资源短缺也很重要。本研究模拟了不同来源的污水进入沼泽的情况,并分析了 N2O 通量、土壤(有机碳、全氮、铵态氮、硝态氮、全磷、可利用磷、pH 值和电导率)、植物(物种丰富度和生物量)和微生物(氨氧化古细菌、napA、nirS、nirK 和 nosZ 基因)。结果表明,再生水没有显著改变 N2O 通量,而 50%自来水混合 50%生活污水和生活污水则显著增加了 N2O 通量。在土壤因素中,可利用氮和 pH 值是影响 N2O 通量的关键因素。在植物参数中,物种丰富度是影响 N2O 通量的主要因素。氮转化功能基因对 N2O 通量的增加贡献最大,生活污水输入量的增加会导致这些基因的丰度增加,进而增加 N2O 排放量。因此,生活污水会影响土壤、植物和微生物,显著增加 N2O 排放量,从而增加全球变暖的可能性,因此应加以考虑。这项研究的结果表明,使用经过处理的再生水进行沼泽补水可能是一种环保的湿地管理方法。
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引用次数: 0
Soil hydrological processes as affected by the conversion of natural tropical rainforest to monoculture rubber plantations 天然热带雨林转变为单一种植橡胶园对土壤水文过程的影响
IF 2.7 2区 环境科学与生态学 Q2 Agricultural and Biological Sciences Pub Date : 2024-03-26 DOI: 10.1093/jpe/rtae021
Qiaoyan Chen, Ruiyu Fu, Siyuan Cheng, Dong Qiao, Zhongmin Hu, Zijia Zhang, Licong Dai
Rubber plantations have increased significantly under unprecedented economic growth in tropical areas, which leads to soil degradation and thereby alters soil hydrological processes. However, our understanding of how forest conversion affects soil hydrological processes remains unclear. Here, we collected soil samples from secondary forests (SF) and rubber plantations (RP) to determine the soil hydrological characteristics. We found the topsoil (0–20 cm) water retention in SF was higher than that of RP but displayed the contrast pattern in a deeper soil layer (20–60 cm). Meanwhile, the soil infiltration rates among two vegetation types decreased significantly with infiltration time, with higher stable soil infiltration rates in SF than those in RP. Moreover, soil properties were also impacted by the forest conversion, such as the topsoil capillary porosity and total porosity in SF were higher than those of RP but contrasted in a deep soil layer. In comparison, the topsoil bulk density in SF was lower than that of RP, but contrasted in the deep soil layer and reached a significant level in the 0–10 cm and 40–50 cm (P<0.05). Overall, the soil water retention was mainly determined by the capillary porosity, which could explain 31.56% of total variance in soil water retention, followed by total porosity (26.57%) and soil bulk density (26.47%), whereas soil texture exerts a week effect on soil water retention. Therefore, we can conclude that the conversion of tropical rainforest into rubber plantations may accelerate soil erosion owing to its lower soil water retention and soil infiltration rates.
在热带地区前所未有的经济增长下,橡胶种植园大幅增加,导致土壤退化,从而改变了土壤水文过程。然而,我们对森林转换如何影响土壤水文过程的认识仍不清楚。在此,我们采集了次生林(SF)和橡胶种植园(RP)的土壤样本,以确定土壤的水文特征。我们发现,次生林表层土壤(0-20 厘米)的保水率高于橡胶园,但在更深的土层(20-60 厘米)中,两者的保水率却形成了鲜明的对比。同时,两种植被类型的土壤入渗率随入渗时间的延长而显著降低,其中 SF 的土壤稳定入渗率高于 RP。此外,土壤特性也受到森林改造的影响,如 SF 的表土毛管孔隙度和总孔隙度均高于 RP,但在深土层中则形成鲜明对比。相比之下,SF 的表土容重低于 RP,但在深土层中形成对比,在 0-10 厘米和 40-50 厘米处达到显著水平(P<0.05)。总体而言,土壤保水性主要由毛管孔率决定,毛管孔率可解释土壤保水性总方差的 31.56%,其次是总孔隙度(26.57%)和土壤容重(26.47%),而土壤质地对土壤保水性的影响较小。因此,我们可以得出结论,将热带雨林转化为橡胶种植园可能会加速土壤侵蚀,因为其土壤保水率和土壤渗透率较低。
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引用次数: 0
Effects of arbuscular mycorrhizal fungi on carbon assimilation and ecological stoichiometry of maize (Zea mays) under combined abiotic stresses 丛枝菌根真菌对非生物综合胁迫下玉米(玉米)碳同化和生态平衡的影响
IF 2.7 2区 环境科学与生态学 Q2 Agricultural and Biological Sciences Pub Date : 2024-02-23 DOI: 10.1093/jpe/rtae010
Q. Ran, Songlin Zhang, Muhammad Arif, Xueting Yin, Shanshan Chen, Guangqian Ren
Arbuscular mycorrhizal fungi (AMF) enhance plant tolerance to abiotic stresses like salinity and improve crop yield. However, their effects are variable, and the underlying cause of such variation remains largely unknown. This study aimed to assess how drought modified the AMF effect on plant resistance to high calcium-saline stress. A pot experiment was performed to examine how AMF inoculation affects the growth, photosynthetic activity, nutrient uptake, and C:N:P stoichiometric ratio of maize under high calcium stress and contrasting water conditions. The results showed that high calcium stress significantly reduced mycorrhizal colonization, biomass accumulation, C assimilation rate, and C:N stoichiometric ratio in plant tissues. Besides, the adverse effects of calcium stress on photosynthesis were exacerbated under drought. AMF inoculation profoundly alleviated such reductions under drought and saline stress. However, it barely impacted maize performance when subjected to calcium stress with well-watered conditions. Moreover, watering changed AMF impact on nutrient allocation in plant tissues. Under well-watered conditions, AMF stimulated P accumulation in roots and plant growth, but did not induce leaf P accumulation proportional to C and N, resulting in increased leaf C:P and N:P ratios under high calcium stress. In contrast, AMF decreased N content and the N:P ratio in leaves under drought. Overall, AMF inoculation improved maize resistance to calcium salt through enhanced photosynthesis and modulation of nutrient stoichiometry, particularly under water deficit. This study highlighted the regulatory role of AMF in carbon assimilation and nutrient homeostasis under compound stresses, which provides significant guidance on crop yield improvement in saline and arid regions.
丛枝菌根真菌(AMF)能增强植物对盐度等非生物胁迫的耐受性,提高作物产量。然而,它们的作用是多变的,而造成这种变化的根本原因在很大程度上仍是未知的。本研究旨在评估干旱如何改变 AMF 对植物抵抗高钙盐胁迫的影响。通过盆栽实验研究了在高钙胁迫和对比水条件下,接种 AMF 如何影响玉米的生长、光合作用、养分吸收以及 C:N:P 的化学计量比。结果表明,高钙胁迫显著降低了植物组织中菌根的定殖率、生物量积累、碳同化率和碳氮比。此外,在干旱条件下,钙胁迫对光合作用的不利影响加剧。在干旱和盐碱胁迫下,接种 AMF 能显著缓解光合作用的降低。然而,当玉米在水分充足的条件下受到钙胁迫时,接种 AMF 对玉米的表现几乎没有影响。此外,浇水改变了 AMF 对植物组织养分分配的影响。在水分充足的条件下,AMF能刺激根系和植株生长中的钾积累,但不能诱导叶片中与钙和氮成正比的钾积累,导致高钙胁迫下叶片中的钙:磷和氮:磷比率增加。相反,在干旱条件下,AMF 会降低叶片中的氮含量和氮磷比。总之,接种AMF可通过增强光合作用和调节养分配比(尤其是在缺水条件下)提高玉米对钙盐的抗性。该研究强调了复合胁迫下AMF在碳同化和养分平衡中的调控作用,为盐碱干旱地区提高作物产量提供了重要指导。
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引用次数: 0
Effects of water extract from Cornus controversa Hemsl. on the expression levels of DiSOC1-b and DiCCoAOMT1 genes related with the growth of dove tree seedlings 山茱萸水提取物对与珙桐幼苗生长相关的 DiSOC1-b 和 DiCCoAOMT1 基因表达水平的影响
IF 2.7 2区 环境科学与生态学 Q2 Agricultural and Biological Sciences Pub Date : 2024-02-14 DOI: 10.1093/jpe/rtae009
Xiao-Yan Chen, Zheng-Chuan Liang, Yun Long, Ji-Hong Pan, Ting-Fa Dong, Qin-Song Liu, Xiao Xu
Although characterization of plant interactions has become a research hotspot to assess the adaptability of endangered plants, the underlying molecular basis remains elusive. Dove tree (Davidia involucrata Baill.) seedlings were watered with distilled water (CK), leaf water extract (0.025 g mL-1) and branch water extract (0.1 g mL-1) from Cornus controversa, respectively. Subsequently, the morphology, biomass and gene expression levels of DiSOC1-b and DiCCoAOMT1 were analyzed. The results showed that morphological traits and biomass accumulation of D. involucrata seedlings were decreased by the addition of leaf water extracts, and increased by branch water extracts. Moreover, the gene expression level of DiSOC1-b was significantly down-regulated, while the gene expression level of DiCCoAOMT1 was significantly up-regulated in the stems and roots of D. involucrata upon treatment with leaf water extracts of C. controversa. In contrast, the gene expression level of DiSOC1-b was significantly up-regulated in the leaves and stems, while the gene expression level of DiCCoAOMT1 was significantly down-regulated in the roots of D. involucrata upon treatment with branch water extracts of C. controversa. In addition, the expression level of DiSOC1-b was positively correlated with most of morphological traits and total biomass (P < 0.05), while DiCCoAOMT1 was negatively correlated with the majority of morphological traits in D. involucrata seedlings (P < 0.05). Taken together, these results suggest that water extracts from the leaves and branches of the C. controversa exhibit opposite allelopathic effects and affect the expression levels of genes related to growth (DiSOC1-b) and environmental adaptability (DiCCoAOMT1) in D. involucrata seedlings.
尽管植物相互作用的表征已成为评估濒危植物适应性的研究热点,但其潜在的分子基础仍然难以捉摸。分别用蒸馏水(CK)、山茱萸叶水提取物(0.025 g mL-1)和山茱萸枝水提取物(0.1 g mL-1)浇灌珙桐(Davidia involucrata Baill.)幼苗。随后,对 DiSOC1-b 和 DiCCoAOMT1 的形态、生物量和基因表达水平进行了分析。结果表明,加入叶片水提取物后,D. involucrata幼苗的形态特征和生物量积累减少,而加入枝条水提取物后,幼苗的形态特征和生物量积累增加。此外,用 C. controversa 的叶水提取物处理 D. involucrata 的茎和根时,DiSOC1-b 的基因表达水平显著下调,而 DiCCoAOMT1 的基因表达水平显著上调。相反,用 C. controversa 的枝叶水提取物处理 D. involucrata 后,DiSOC1-b 在叶和茎中的基因表达水平明显上调,而 DiCCoAOMT1 在根中的基因表达水平明显下调。此外,DiSOC1-b 的表达水平与 D. involucrata 幼苗的大多数形态特征和总生物量呈正相关(P < 0.05),而 DiCCoAOMT1 与 D. involucrata 幼苗的大多数形态特征呈负相关(P < 0.05)。综上所述,这些结果表明,从C. controversa的叶片和枝条中提取的水提取物具有相反的等位基因效应,会影响D. involucrata幼苗中与生长(DiSOC1-b)和环境适应性(DiCCoAOMT1)相关基因的表达水平。
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引用次数: 0
Interrelationship between tree-ring width and supra-annual reproductive behaviour of Cedrela odorata: an alert for dendrochronological research Cedrela odorata 的树环宽度与超年限繁殖行为之间的相互关系:为树木年代学研究敲响警钟
IF 2.7 2区 环境科学与生态学 Q2 Agricultural and Biological Sciences Pub Date : 2024-01-31 DOI: 10.1093/jpe/rtad048
M. S. Costa, T. J. de Vasconcellos, C. Lisi, Arno Fritz Neves Brandes, M. Tomazello-Filho, C. Callado
Allocating resources for reproduction involves ecological and evolutionary factors and can reduce vegetative growth in plants. This interrelationship is not easily observed in nature, as there are many parameters that can limit the production of reproductive structures or the addition of biomass. We related tree-ring width to supra-annual reproductive behaviour of Cedrela odorata L. (Meliaceae) in the Atlantic Forest of Rio de Janeiro State. In general, the development of reproductive structures occurred in wet years, without water deficit at the beginning of the growth season. However, in these years, tree-ring width was smaller. These results may be associated with the lack of correlation between tree-ring width and local climate. In this way, we highlight the importance of incorporating reproductive data in radial growth studies to expand the understanding of growth variability in tropical forests.
为繁殖分配资源涉及生态和进化因素,会减少植物的无性生长。这种相互关系在自然界中不易观察到,因为有许多参数可以限制生殖结构的产生或生物量的增加。我们将树环宽度与里约热内卢州大西洋森林中 Cedrela odorata L.(甜菜科)的超年繁殖行为联系起来。一般来说,生殖结构的发育发生在湿润的年份,生长季节开始时没有缺水现象。不过,这些年份的树环宽度较小。这些结果可能与树环宽度与当地气候之间缺乏相关性有关。因此,我们强调将生殖数据纳入径向生长研究的重要性,以扩大对热带森林生长变异性的了解。
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引用次数: 0
Trade-offs between chemical resistance to herbivory and responses to abiotic stresses in invasive plants 入侵植物对食草动物的化学抗性与非生物胁迫反应之间的权衡
IF 2.7 2区 环境科学与生态学 Q2 Agricultural and Biological Sciences Pub Date : 2024-01-25 DOI: 10.1093/jpe/rtae007
Lifeng Zhou, Wandong Yin, Jianqing Ding
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引用次数: 0
Uncharted effects of Fukushima Nuclear Plant Wastewater Discharge on marine life 福岛核电站废水排放对海洋生物的未知影响
IF 2.7 2区 环境科学与生态学 Q2 Agricultural and Biological Sciences Pub Date : 2024-01-24 DOI: 10.1093/jpe/rtae006
Xiaoqi Zhou
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引用次数: 0
Leaf and root traits are partially coordinated but they show contrasting multi-trait-based community trait dispersion patterns in a subtropical forest 在亚热带森林中,叶片和根的性状部分协调,但它们显示出截然不同的基于多性状的群落性状分散模式
IF 2.7 2区 环境科学与生态学 Q2 Agricultural and Biological Sciences Pub Date : 2023-12-12 DOI: 10.1093/jpe/rtad045
Wenqi Luo, O. Valverde‐Barrantes, Monique Weemstra, James F Cahill, Zi Wang, Dong He, Yongfa Chen, Chengjin Chu, Youshi Wang
The ecology of plant species relies on the synchronous functioning of leaves and roots, but few studies have simultaneously examined the community trait dispersion patterns (CTD) of both organs. We measured 16 analogous leaf and root traits on 44 co-occurring woody species in a subtropical forest in southern China, examining whether leaf and root traits were coordinated, organized into parallel trait axes, exhibited similar CTD, and displayed consistent responses in CTD and community-weighted means of (CWM) traits over environmental gradients. While the first axes of leaf and root trait variation similarly exhibited a fast – slow continuum, leaf traits covered a secondary ‘carbon economics’ axis, contrasting to root traits depicting a collaboration axis reflecting species’ mycorrhizal dependency. Analogous leaf and root chemical traits were generally coordinated but less so for morphological traits. At the community level, changes in the CWM of the first axes were generally consistent among organs with more conservative traits found as increasing elevation but not for the second axis. While root traits became thinner and more conservative as soil phosphorus decreased, leaf traits rarely varied. When different trait axes were combined, leaf traits were overdispersed but tended to converge with increased elevation and soil potassium and phosphorus levels, whereas root traits were clustered but tended to diverge along the same gradients. Our study highlights fine filtering of different suites of traits above- and below-ground, which in turn might reduce overall niche overlap among species and promote coexistence with diverse functional designs.
植物物种的生态依赖于叶和根的同步功能,但很少有研究同时考察这两个器官的群落性状离散模式(CTD)。我们测量了中国南方亚热带森林中44种共生木本植物的16个类似叶片和根的性状,考察了叶片和根的性状是否协调,是否组成平行的性状轴,是否表现出相似的群落性状扩散模式(CTD),以及在环境梯度上CTD和群落加权平均性状(CWM)是否表现出一致的响应。虽然叶片和根系性状变异的第一轴同样表现出快-慢的连续性,但叶片性状覆盖了次要的 "碳经济学 "轴,而根系性状则是反映物种菌根依赖性的协作轴。类似的叶片和根系化学性状通常是协调的,但形态性状则不太协调。在群落水平上,随着海拔的升高,第一条轴的化学成分变化在各器官之间基本一致,且性状更为保守,但第二条轴则不然。根的性状随着土壤磷的减少而变得更细、更保守,而叶的性状却很少变化。当把不同的性状轴结合在一起时,叶片性状过于分散,但随着海拔高度和土壤钾、磷水平的增加,叶片性状趋于一致,而根系性状则集中在一起,但沿着相同的梯度趋于分化。我们的研究强调了对地上和地下不同性状的精细过滤,这反过来又可能减少物种间的总体生态位重叠,促进具有不同功能设计的物种共存。
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引用次数: 0
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Journal of Plant Ecology
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