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Heron: Visualizing and Controlling Chemical Reaction Explorations and Networks 苍鹭可视化和控制化学反应探索和网络
Pub Date : 2024-06-13 DOI: arxiv-2406.09541
Charlotte H. Müller, Miguel Steiner, Jan P. Unsleber, Thomas Weymuth, Moritz Bensberg, Katja-Sophia Csizi, Maximilian Mörchen, Paul L. Türtscher, Markus Reiher
Automated and high-throughput quantum chemical investigations into chemicalprocesses have become feasible in great detail and broad scope. This results inan increase in complexity of the tasks and in the amount of generated data. Anefficient and intuitive way for an operator to interact with these data and tosteer virtual experiments is required. Here, we introduce Heron, a graphicaluser interface that allows for advanced human-machine interactions with quantumchemical exploration campaigns into molecular structure and reactivity. Heronoffers access to interactive and automated explorations of chemical reactionswith standard electronic structure modules, haptic force feedback, microkineticmodeling, and refinement of data by automated correlated calculations includingblack-box complete active space calculations. It is tailored to the explorationand analysis of vast chemical reaction networks. We show how interoperablemodules enable advanced workflows and pave the way for routinelow-entrance-barrier access to advanced modeling techniques.
对化学过程进行自动化和高通量量子化学研究已经变得非常可行,而且范围广泛。这导致任务的复杂性和生成的数据量增加。我们需要一种高效、直观的方法,让操作人员与这些数据进行交互,并引导虚拟实验。在这里,我们将介绍一种图形用户界面--Heron,它允许先进的人机交互与量子化学探索活动,以了解分子结构和反应性。Heron 提供了通过标准电子结构模块、触觉力反馈、微观动力学建模和自动相关计算(包括黑盒完整活性空间计算)完善数据的交互式自动化学反应探索。它专为探索和分析庞大的化学反应网络而量身定制。我们展示了互操作模块如何实现先进的工作流程,并为以低门槛的方式获取先进的建模技术铺平了道路。
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引用次数: 0
A minimalistic and general weighted averaging method for inconsistent data 针对不一致数据的简约通用加权平均法
Pub Date : 2024-06-12 DOI: arxiv-2406.08293
Martino Trassinelli, Marleen Maxton
The weighted average of inconsistent data is a common and tedious problemthat many scientists have encountered. The standard weighted average is notrecommended for these cases, and different alternative methods are proposed inthe literature. Here, we introduce a new method based on Bayesian statisticsfor a broad application that keeps the number of assumptions to a minimum. Theuncertainty associated with each input value is considered just a lower boundof the true unknown uncertainty. By assuming a non-informative (Jeffreys')prior for true uncertainty and marginalising over its value, a modifiedGaussian distribution is obtained with smoothly decreasing wings, which allowsfor a better treatment of scattered data and outliers. The proposed method istested on a series of data sets: simulations, CODATA recommended value of theNewtonian gravitational constant, and some particle properties from theParticle Data Group, including the proton charge radius and the mass of the Wboson. For the latter in particular, contrary to other works, our predictionlies in good agreement with the Standard Model. A freely available Pythonlibrary is also provided for a simple implementation of our averaging method.
不一致数据的加权平均是许多科学家都遇到过的一个常见而又繁琐的问题。标准加权平均法不推荐用于这些情况,文献中提出了不同的替代方法。在此,我们介绍一种基于贝叶斯统计的新方法,它应用广泛,能将假设的数量保持在最低水平。与每个输入值相关的不确定性被视为真实未知不确定性的下限。通过假设真实不确定性的非信息(杰弗里斯)先验值并对其值进行边际化处理,可以得到一个具有平滑递减翼的修正高斯分布,从而可以更好地处理分散数据和异常值。所提出的方法在一系列数据集上进行了测试:模拟、牛顿引力常数的 CODATA 推荐值,以及粒子数据组的一些粒子特性,包括质子电荷半径和 W 玻色子质量。特别是后者,与其他工作相反,我们的预测与标准模型非常一致。我们还提供了一个免费的 Python 库,用于简单实现我们的平均方法。
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引用次数: 0
On the archetypal `flavours', indices and teleconnections of ENSO revealed by global sea surface temperatures 全球海面温度揭示的厄尔尼诺/南方涛动的原型 "色彩"、指数和远距离联系
Pub Date : 2024-06-12 DOI: arxiv-2406.08694
Didier P. Monselesan, James S. Risbey, Benoit Legresy, Sophie Cravatte, Bastien Pagli, Takeshi Izumo, Christopher C. Chapman, Mandy Freund, Abdelwaheb Hannachi, Damien Irving, P. Jyoteeshkumar Reddy, Doug Richardson, Dougal T. Squire, Carly R. Tozer
El Ni~no-Southern Oscillation global (ENSO) imprint on sea surfacetemperature comes in many guises. To identify its tropical fingerprints andimpacts on the rest of the climate system, we propose a global approach basedon archetypal analysis (AA), a pattern recognition method based on theidentification of extreme configurations in the dataset under investigation.Relying on detrended sea surface temperature monthly anomalies over the 1982 to2022 period, the technique recovers central and eastern Pacific ENSO typesidentified by more traditional methods and allows one to hierarchically addextra flavours and nuances to both persistent and transient phases of thephenomenon. Archetypal patterns found compare favorably to phase identificationfrom K-means, fuzzy C-means and recently published network-basedmachine-learning algorithms. The AA implementation is modified for theidentification of ENSO phases in sub-seasonal-to-seasonal prediction systemsand complements current alert systems in characterising the diversity of ENSOand its teleconnections. Tropical and extra-tropical teleconnection compositesfrom various oceanic and atmospheric fields derived from the analysis are shownto be robust and physically relevant. Extending AA to sub-surface ocean fieldsimproves the discrimination between phases when the characterisation of ENSObased on sea surface temperature is uncertain. We show that AA on detrendedsea-level monthly anomalies provides a clearer expression of ENSO types.
厄尔尼诺/南方涛动(ENSO)对海面温度的全球影响有多种形式。为了识别它的热带指纹和对气候系统其他部分的影响,我们提出了一种基于原型分析(AA)的全球方法,这是一种基于识别调查数据集中极端配置的模式识别方法。依靠 1982 年至 2022 年期间的去趋势海面温度月度异常,该技术恢复了用更多传统方法识别的中太平洋和东太平洋厄尔尼诺/南方涛动类型,并允许人们分层次地为该现象的持续和瞬时阶段添加额外的味道和细微差别。所发现的原型模式与 K-均值、模糊 C-均值和最近发布的基于网络的机器学习算法的相位识别相比,效果更佳。AA 实现经过修改,可用于识别亚季节到季节预报系统中的厄尔尼诺/南方涛动阶段,并在描述厄尔尼诺/南方涛动及其远程联系的多样性方面对当前警报系统进行补充。从分析中得出的各种海洋和大气场的热带和热带外远缘联系组合显示出其稳健性和物理相关性。当基于海表温度的厄尔尼诺/南方涛动特征不确定时,将 AA 扩展到次表层海洋场可提高阶段之间的判别能力。我们表明,对去趋势海平面月度异常的 AA 可以更清晰地表达 ENSO 类型。
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引用次数: 0
Comparative Analysis of $k$-essence and Quintessence Scalar Field Models: A Data Analysis Approach k$-essence和Quintessence标量场模型的比较分析:数据分析方法
Pub Date : 2024-06-11 DOI: arxiv-2406.07179
Saddam Hussain, Sarath Nelleri, Kaushik Bhattacharya
We perform a comparative analysis of quintessence and $k$-essence scalarfield models in the data analysis perspective. We study the quintessence fieldwith an exponential potential and the $k$-essence field with an inverse squarepotential in the present work. Before delving into data analysis, we provide abrief perspective on dynamical evolution on both of the models and obtain thestability constraints on the model parameters. We adopt Bayesian inferenceprocedure to estimate the model parameters that best-fit the data. Acomprehensive analysis utilizing Observational Hubble data (OHD) and Pantheon+compilation of Type Ia supernovae (SNIa) shows that $k$-essence model fits thedata slightly better than the quintessence model while the evidence of thesemodels in comparison with the $Lambda$CDM model is weak. The value of theHubble constant predicted by both the models is in close agreement with thevalue obtained by the Planck2018 collaboration assuming the $Lambda$CDM model.
我们从数据分析的角度对五元场和 $k$-essence 标量场模型进行了比较分析。在本研究中,我们研究了指数势的五价场和反平方势的k$-essence场。在深入研究数据分析之前,我们从动力学演化的角度对这两个模型进行了简要分析,并得到了模型参数的稳定性约束。我们采用贝叶斯推理过程来估计最适合数据的模型参数。利用哈勃观测数据(OHD)和Pantheon+ Ia型超新星(SNIa)汇编进行的综合分析表明,k$-essence模型比quintessence模型对数据的拟合稍好,而这些模型与$Lambda$CDM模型相比证据不足。两个模型预测的哈勃常数值与Planck2018合作组假设$Lambda$CDM模型得到的值接近一致。
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引用次数: 0
Experimental verification of the optimal fingerprint method for detecting climate change 检测气候变化的最佳指纹法的实验验证
Pub Date : 2024-06-11 DOI: arxiv-2406.11879
Jinbo Hu, Hong Yuan, Letian Chen, Nan Zhao, C. P. Sun
The optimal fingerprint method serves as a potent approach for detecting andattributing climate change. However, its experimental validation encounterschallenges due to the intricate nature of climate systems. Here, weexperimentally examine the optimal fingerprint method simulated by a preciselycontrolled magnetic resonance system of spins. The spin dynamic under anapplied deterministic driving field and a noise field is utilized to emulatethe complex climate system with external forcing and internal variability. Ourexperimental results affirm the theoretical prediction regarding the existenceof an optimal detection direction which maximizes the signal-to-noise ratio,thereby validating the optimal fingerprint method. This work offers directempirical verification of the optimal fingerprint method, crucial forcomprehending climate change and its societal impacts.
最佳指纹法是检测和归因气候变化的有效方法。然而,由于气候系统的复杂性,其实验验证遇到了挑战。在这里,我们通过一个精确控制的自旋磁共振系统模拟了最优指纹法。利用确定性驱动场和噪声场应用下的自旋动态来模拟具有外部强迫和内部变异性的复杂气候系统。实验结果证实了关于存在最佳探测方向的理论预测,该方向可使信噪比最大化,从而验证了最佳指纹识别方法。这项工作为最佳指纹法提供了直接的经验验证,对于理解气候变化及其社会影响至关重要。
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引用次数: 0
Binary asteroid candidates in Gaia DR3 astrometry 盖亚DR3天体测量中的候选双小行星
Pub Date : 2024-06-11 DOI: arxiv-2406.07195
Luana Liberato, Paolo Tanga, David Mary, Kate Minker, Benoit Carry, Federica Spoto, Przemyslaw Bartczak, Bruno Sicardy, Dagmara Oszkiewicz, Josselin Desmars
Asteroids with companions constitute an excellent sample for studying thecollisional and dynamical evolution of minor planets. The currently knownbinary population were discovered by different complementary techniques thatproduce, for the moment, a strongly biased distribution, especially in a rangeof intermediate asteroid sizes (approximately 20 to 100 km) where both mutualphotometric events and high-resolution adaptive optic imaging are poorlyefficient. A totally independent technique of binary asteroid discovery, basedon astrometry, can help to reveal new binary systems and populate a range ofsizes and separations that remain nearly unexplored. In this work, we describea dedicated period detection method and its results for the Gaia DR3 data set.This method looks for the presence of a periodic signature in the orbitpost-fit residuals. After conservative filtering and validation based onstatistical and physical criteria, we are able to present a first sample ofastrometric binary candidates, to be confirmed by other observation techniquessuch as photometric light curves and stellar occultations.
有伴星的小行星是研究小行星碰撞和动力学演变的极好样本。目前已知的双星群是通过不同的互补技术发现的,这些技术目前产生的分布有很大的偏差,特别是在中等大小的小行星范围内(约 20 至 100 公里),在这一范围内,互射事件和高分辨率自适应光学成像的效率都很低。基于天体测量学的完全独立的双小行星发现技术可以帮助揭示新的双星系统,并填充几乎仍未探索的大小和距离范围。在这项工作中,我们描述了一种专门的周期探测方法及其在盖亚 DR3 数据集上的结果。经过基于统计和物理标准的保守过滤和验证,我们能够提出第一批天文双星候选样本,并通过其他观测技术(如测光光曲线和恒星掩星)加以确认。
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引用次数: 0
Fisher's Mirage: Noise Tightening of Cosmological Constraints in Simulation-Based Inference 费雪的幻影:基于模拟推断的宇宙学约束的噪声紧缩
Pub Date : 2024-06-10 DOI: arxiv-2406.06067
Christopher Wilson, Rachel bean
We systematically analyze the implications of statistical noise withinnumerical derivatives on simulation-based Fisher forecasts for large scalestructure surveys. Noisy numerical derivatives resulting from a finite numberof simulations, $N_{sims}$, act to bias the associated Fisher forecast suchthat the resulting marginalized constraints can be significantly tighter thanthe noise-free limit. We show the source of this effect can be traced to theinfluence of the noise on the marginalization process. Parameters such as theneutrino mass, $M$, for which higher-order forward differentiation schemes arecommonly used, are more prone to noise; the predicted constraints can be akinto those purely from a random instance of statistical noise even using$(1mathrm{Gpc}/h)^{3}$ simulations with $N_{sims}=500$ realizations. Wedemonstrate how derivative noise can artificially reduce parameter degeneraciesand seemingly null the effects of adding nuisance parameters to the forecast,such as HOD fitting parameters. We mathematically characterize these effectsthrough a full statistical analysis, and demonstrate how confidence intervalsfor the true noise-free, $N_{sims} rightarrow infty$, Fisher constraints canbe recovered even when noise comprises a consequential component of themeasured signal. The findings and approaches developed here are important forensuring simulation-based analyses can be accurately used to assess upcomingsurvey capabilities.
我们系统地分析了数值导数中的统计噪声对基于模拟的大型结构勘测费雪预测的影响。由有限次模拟($N_{sims}$)产生的噪声数值导数会使相关的费雪预测产生偏差,从而导致边际化约束比无噪声极限要严格得多。我们表明,这种效应的根源可以追溯到噪声对边际化过程的影响。诸如中微子质量($M$)这样的参数更容易受到噪声的影响;即使使用$(1mathrm{Gpc}/h)^{3}$模拟,并使用$N_{sims}=500$实现,预测的约束条件也可能类似于那些纯粹来自统计噪声随机实例的约束条件。我们展示了导数噪声是如何人为地降低参数退化性,并使在预测中添加干扰参数(如 HOD 拟合参数)的效果看似无效的。我们通过全面的统计分析从数学上描述了这些影响,并证明了真正无噪声的 $N_{sims} 的置信区间是如何形成的。rightarrow infty$,费舍尔约束条件的置信区间是如何恢复的,即使噪声在测量信号中占了很大一部分。这些发现和方法对于确保基于模拟的分析能够准确地用于评估未来的勘测能力非常重要。
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引用次数: 0
Time-series-analysis-based detection of critical transitions in real-world non-autonomous systems 基于时间序列分析的真实世界非自主系统关键转换检测
Pub Date : 2024-06-07 DOI: arxiv-2406.05195
Klaus Lehnertz
Real-world non-autonomous systems are open, out-of-equilibrium systems thatevolve in and are driven by temporally varying environments. Such systems canshow multiple timescale and transient dynamics together with transitions tovery different and, at times, even disastrous dynamical regimes. Since suchcritical transitions disrupt the systems' intended or desired functionality, itis crucial to understand the underlying mechanisms, to identify precursors ofsuch transitions and to reliably detect them in time series of suitable systemobservables to enable forecasts. This review critically assesses the varioussteps of investigation involved in time-series-analysis-based detection ofcritical transitions in real-world non-autonomous systems: from the datarecording to evaluating the reliability of offline and online detections. Itwill highlight pros and cons to stimulate further developments, which would benecessary to advance understanding and forecasting nonlinear behavior such ascritical transitions in complex systems.
现实世界中的非自主系统是开放的、失去平衡的系统,在随时间变化的环境中发展,并受其驱动。这类系统可以表现出多种时间尺度和瞬态动态,并过渡到不同的动态状态,有时甚至是灾难性的动态状态。由于这种关键的转变会破坏系统的预期或期望功能,因此了解其潜在机制、识别这种转变的前兆并在适当的系统观测数据的时间序列中可靠地检测它们以进行预测至关重要。本综述严格评估了基于时间序列分析检测真实世界非自主系统中临界转换所涉及的各种调查步骤:从数据记录到评估离线和在线检测的可靠性。本文将强调利弊,以激励进一步的发展,这对促进理解和预测复杂系统中的临界转换等非线性行为是必要的。
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引用次数: 0
Generative Diffusion Models for Fast Simulations of Particle Collisions at CERN 用于欧洲核子研究中心粒子碰撞快速模拟的生成扩散模型
Pub Date : 2024-06-05 DOI: arxiv-2406.03233
Mikołaj Kita, Jan Dubiński, Przemysław Rokita, Kamil Deja
In High Energy Physics simulations play a crucial role in unraveling thecomplexities of particle collision experiments within CERN's Large HadronCollider. Machine learning simulation methods have garnered attention aspromising alternatives to traditional approaches. While existing methods mainlyemploy Variational Autoencoders (VAEs) or Generative Adversarial Networks(GANs), recent advancements highlight the efficacy of diffusion models asstate-of-the-art generative machine learning methods. We present the firstsimulation for Zero Degree Calorimeter (ZDC) at the ALICE experiment based ondiffusion models, achieving the highest fidelity compared to existingbaselines. We perform an analysis of trade-offs between generation times andthe simulation quality. The results indicate a significant potential of latentdiffusion model due to its rapid generation time.
在欧洲核子研究中心的大型强子对撞机中,高能物理模拟在揭示粒子对撞实验的复杂性方面发挥着至关重要的作用。机器学习仿真方法作为传统方法的替代品备受关注。虽然现有方法主要采用变异自动编码器(VAE)或生成对抗网络(GAN),但最近的进展凸显了扩散模型作为最先进的生成机器学习方法的功效。我们首次基于扩散模型在 ALICE 实验中模拟了零度量热器(ZDC),与现有基线相比达到了最高的保真度。我们对生成时间和仿真质量之间的权衡进行了分析。结果表明,延迟扩散模型因其快速生成时间而具有巨大潜力。
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引用次数: 0
Precise interpretations of traditional fine-tuning measures 传统微调措施的精确解释
Pub Date : 2024-06-05 DOI: arxiv-2406.03533
Andrew Fowlie, Gonzalo Herrera
We uncover two precise interpretations of traditional electroweak fine-tuning(FT) measures that were historically missed. (i) a statistical interpretation:the traditional FT measure shows the change in plausibility of a model in whicha parameter was exchanged for the $Z$ boson mass relative to an untuned modelin light of the $Z$ boson mass measurement. (ii) an information-theoreticinterpretation: the traditional FT measure shows the exponential of the extrainformation, measured in nats, relative to an untuned model that you mustsupply about a parameter in order to fit the $Z$ mass. We derive themathematical results underlying these interpretations, and explain them usingexamples from weak scale supersymmetry. These new interpretations shed freshlight on historical and recent studies using traditional FT measures.
我们揭示了传统电弱微调(FT)量度的两种精确解释,而这两种解释在历史上都被忽略了。(i) 统计学解释:传统的微调量度显示了一个模型的可信度的变化,在这个模型中,一个参数被交换为玻色子质量,相对于一个未调谐的模型,它是根据玻色子质量的测量值。(ii)信息论解释:传统的 FT 测量显示了相对于非调谐模型的信息外延指数(以纳特为单位),为了拟合 Z$玻色子质量,你必须提供一个参数。我们推导出这些解释所依据的数学结果,并用弱尺度超对称的例子来解释它们。这些新的解释为历史上和最近使用传统FT测量方法的研究提供了新的启示。
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引用次数: 0
期刊
arXiv - PHYS - Data Analysis, Statistics and Probability
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