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Cryptic species and taxonomic revision of kangaroo mice, the rodent genus Microdipodops. 鼠属小二足动物袋鼠鼠的隐种及分类修正。
IF 1.6 3区 生物学 Q2 ZOOLOGY Pub Date : 2025-12-15 eCollection Date: 2025-12-01 DOI: 10.1093/jmammal/gyaf070
John C Hafner, Nathan S Upham, Fiona Gowen-Huang, Jessica E Light

This study presents the first systematic revision of kangaroo mice, the heteromyid genus Microdipodops, in over 8 decades. The study relies on a suite of genetic (karyology and nuclear and mitochondrial DNA sequencing) and phenetic (cranial morphometrics and pelage colorimetry) characters to examine differentiation within the genus. We also present the first molecular phylogeny of the subfamily Dipodomyinae (includes kangaroo mice and kangaroo rats, Dipodomys) that incorporates all currently recognized species. Building on previous studies (including unpublished materials) and incorporating additional laboratory analyses and fieldwork, we find genetic evidence to recognize 6 species of Microdipodops organized into 2 subgenera as follows: M. Microdipodops, including M. (M.) albiventer, M. (M.) megacephalus, M. (M.) oregonus, and M. (M.) polionotus; and M. Psammophilomys, new subgenus, which includes M. (P.) pallidus and M. (P.) ruficollaris. All 6 species are endemic to the Great Basin Desert of western North America. We are unable to discriminate among these species using discriminate function analyses of cranial and pelage morphometric characters; indeed, the species are morphologically cryptic but genetically distinctive. We find strong molecular phylogenetic support for both a monophyletic Microdipodops and Dipodomys. Molecular divergence-time analyses show that the 2 subgenera of Microdipodops diverged from each other about 4.8 million years ago (Ma) and that the 3 sister-species pairs diverged approximately 1.2, 1.4 and 1.9 Ma, which compares to sister species of Dipodomys that diverged between 0.8 and 3.8 Ma in the same analysis. Expanded fieldwork, specimen collecting, and genetic sampling show range extensions and a reorganized distributional patterning of species of Microdipodops across the Great Basin Desert. Most noteworthy among the distributional changes is our discovery that kangaroo mice of the Owyhee Desert (ecoregion includes southwestern Idaho, southeastern Oregon and north-central Nevada), previously deemed a relictual isolate, all belong to the same species and that this species should bear the name M. (M.) megacephalus given that the type specimen of the genus (from Halleck, in northern Nevada) is genetically most closely related to other kangaroo mice of the Owyhee Desert. The ecological preferences of M. (M.) megacephalus appear to be strikingly dissimilar to those of its congeners. With the descriptions of 4 new species, and revised taxonomic concepts for 2 others, this study has important implications for the conservation and management of kangaroo mice across their distribution.

本研究提出了80多年来袋鼠小鼠(异胚属小二足动物)的首次系统修订。该研究依赖于一套遗传(核和核和线粒体DNA测序)和表型(颅形态计量学和皮毛比色法)特征来检查属内的分化。我们还提出了袋鼠亚科(包括袋鼠小鼠和袋鼠大鼠,Dipodomys)的第一个分子系统发育,包括所有目前公认的物种。在前人研究(包括未发表的材料)的基础上,结合额外的实验室分析和实地调查,我们发现了6种小双足动物的遗传证据,分为以下2个亚属:小双足动物,包括M. (M.) albiventer、M. (M.) megacephalus、M. (M.) oregonus和M. (M.) polionotus;和新亚属psammoophomys,包括M. (P.) pallidus和M. (P.) ruficollaris。这6种都是北美西部大盆地沙漠的特有种。我们无法使用颅骨和皮膜形态特征的区分功能分析来区分这些物种;事实上,这些物种在形态上是神秘的,但在基因上是独特的。我们发现单系小二足动物和双足动物都有很强的分子系统发育支持。分子分化时间分析表明,微二足纲的2个亚属在480万年前(Ma)开始分化,3对姊妹种的分化时间约为1.2、1.4和1.9 Ma,而双足纲的姊妹种在同一分析中分化时间约为0.8 ~ 3.8 Ma。扩展的田野调查、标本收集和基因取样表明,在大盆地沙漠中,小双足动物的种类范围扩大,分布格局重新组织。在分布变化中,最值得注意的是我们发现,奥威希沙漠(生态区包括爱达荷州西南部、俄勒冈州东南部和内华达州中北部)的袋鼠鼠,以前被认为是宗教孤立的,都属于同一个物种,这个物种应该被命名为M. (M.) megacephalus,因为该属的模式标本(来自内华达州北部的Halleck)与奥威希沙漠的其他袋鼠鼠在基因上最接近。巨头鲸的生态偏好似乎与其同类有着惊人的不同。本研究获得了4个新物种的描述,并修订了2个新物种的分类概念,对袋鼠鼠分布的保护和管理具有重要意义。
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引用次数: 0
Phenotype response for the invasive Petaurus notatus in Tasmania. 塔斯马尼亚州侵入性白莲花的表型反应。
IF 1.6 3区 生物学 Q2 ZOOLOGY Pub Date : 2025-10-27 eCollection Date: 2025-12-01 DOI: 10.1093/jmammal/gyaf074
Meagan Powley, Katarina Mikac

A mainland native nocturnal arboreal glider Petaurus notatus (Krefft's Glider) was introduced to Tasmania in the 1830s as a pet and its subsequent escape and landscape spread has been associated with the predation of endemic and migratory birds. Using geometric morphometrics, we assessed whether P. notatus experienced a phenotypic response, visible in their skull, after introduction to Tasmania. We found significant skull form variation between Tasmanian (n = 57) and Victorian (n = 102) glider specimens. Specifically, there is an increase in rostrum length-particularly at the mid-cranium-a dorsal shift of the frontal bones, and increase in posterior angle of the coronoid process on the mandible. Whether this morphological change is associated with a dietary shift towards carnivory or because of multiple ecological pressures is unclear. However, similar morphological variations identified in the Tasmanian specimens have previously been linked to an increase in carnivory in other species as noted by other researchers.

19世纪30年代,一种本土的夜间树栖滑翔机Petaurus notatus (Krefft’s glider)作为宠物被引入塔斯马尼亚岛,随后它的逃逸和景观传播与当地特有鸟类和候鸟的捕食有关。使用几何形态计量学,我们评估了P. notatus在引入塔斯马尼亚岛后是否经历了表型反应,在他们的头骨中可见。我们发现塔斯马尼亚(n = 57)和维多利亚(n = 102)滑翔机标本的颅骨形态存在显著差异。具体地说,有颈骨长度增加,特别是在颅骨中部,额骨背移,下颌骨冠突后角增加。这种形态变化是否与饮食向食肉性转变有关,还是由于多重生态压力,目前尚不清楚。然而,其他研究人员指出,在塔斯马尼亚标本中发现的类似形态变异与其他物种食肉性的增加有关。
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引用次数: 0
Biodiversity conservation depends on the expansion of taxonomy and systematics research. 生物多样性的保护依赖于分类学和系统学研究的扩展。
IF 1.6 3区 生物学 Q2 ZOOLOGY Pub Date : 2025-10-21 eCollection Date: 2025-12-01 DOI: 10.1093/jmammal/gyaf067
Luis A Ruedas, Scott L Gardner

Despite mammals constituting fewer than 0.3% of all described species, their conservation is compelling for a number of reasons. They contribute to biodiversity and are important in maintaining and regulating ecological communities. Many mammals have significant cultural and economic value, serving as sources of food, medicine, and tourism revenue. Furthermore, the conservation of mammals often leads to the protection of entire habitats, benefiting numerous other species and preserving ecosystem services that are critical for human well--being. Humans share a unique evolutionary history with other mammal species, making their preservation important for scientific research, education, and understanding of our own biology and evolution. In spite of this, mammalian biodiversity is at severe risk, with 26% of all mammal species threatened with extinction. Here, we propose to use a 4-step framework with which to approach conservation strategy for mammalian biodiversity. The framework is structured and based on a protocol initially established from the standpoint of parasites by Daniel R. Brooks and collaborators in 2014. The 4 key phases are documentation (species discovery and specimen collection); assessment (species relationships, genetic diversity, and climate change vulnerability); monitoring (tracking populations and habitats over time); and action (addressing the taxonomic impediment-the lack of human and financial resources to undertake taxonomy, as well as the discrepancy between real number of existing species and human knowledge of biodiversity-and expanding protected areas). The successful integration of politics, politicians, and stakeholders into the process of conservation is critical to the success of the protocol because of the requirement to enact policy. And the urgency is now, because nothing is more vital to the human condition than preservation of biodiversity.

尽管哺乳动物在所有已描述物种中所占比例不到0.3%,但出于一些原因,它们的保护是令人信服的。它们有助于生物多样性,在维持和调节生态群落方面也很重要。许多哺乳动物具有重要的文化和经济价值,作为食物、药物和旅游收入的来源。此外,对哺乳动物的保护往往导致对整个栖息地的保护,使许多其他物种受益,并保持对人类福祉至关重要的生态系统服务。人类与其他哺乳动物有着独特的进化史,因此保护人类对于科学研究、教育以及理解人类自身的生物学和进化具有重要意义。尽管如此,哺乳动物的生物多样性仍面临严重风险,26%的哺乳动物物种面临灭绝的威胁。在这里,我们建议使用一个四步框架来处理哺乳动物生物多样性的保护策略。该框架是基于Daniel R. Brooks及其合作者于2014年从寄生虫的角度建立的协议构建的。4个关键阶段是记录(物种发现和标本收集);评估(物种关系、遗传多样性和气候变化脆弱性);监测(跟踪一段时间内的种群和栖息地);行动(解决分类学上的障碍——缺乏进行分类学的人力和财政资源,以及现有物种的实际数量与人类对生物多样性的认识之间的差异——以及扩大保护区)。政治、政治家和利益相关者在保护过程中的成功整合对议定书的成功至关重要,因为需要制定政策。现在是最紧迫的,因为没有什么比保护生物多样性对人类的生存状况更重要了。
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引用次数: 0
Digging for cold: how temperature and depth determine hibernacula selection for a small mammalian hibernator, the New Mexico Jumping Mouse (Zapus luteus). 挖掘寒冷:温度和深度如何决定小型哺乳动物冬眠的选择,新墨西哥跳鼠(Zapus luteus)。
IF 1.6 3区 生物学 Q2 ZOOLOGY Pub Date : 2025-10-16 eCollection Date: 2025-12-01 DOI: 10.1093/jmammal/gyaf066
Jennifer L Zahratka, C Loren Buck, Robert Buscaglia, Carol L Chambers

Adaptation of mammals to seasonally changing environments is crucial for survival and fitness. Some mammals migrate or alter their behavior when resources are limited, while others hibernate-a strategy that offers profound seasonal metabolic savings. During hibernation, both body temperature and metabolic rate are reduced, minimizing energy expenditures. However, when hibernacula temperatures decrease to below their body temperature setpoint, mammals must increase thermoregulatory output to maintain body temperature. Thus, the thermal characteristics of hibernacula play a crucial role in determining overwinter metabolic expenditure. We identified hibernacula locations of the endangered New Mexico Jumping Mouse (Zapus luteus), described physical characteristics of the hibernacula, and compared soil temperatures between hibernacula and randomly selected sites. Additionally, we explored the relationship between ambient air and soil temperatures at hibernacula to understand their influence on thermal buffering and the stability of microclimatic conditions. In Arizona and Colorado from 2019 to 2021, we tracked New Mexico jumping mice into hibernation to confirm hibernacula locations. We used radiotelemetry and Passive Integrated Transponder tags with a priori criteria to identify underground locations. We confirmed and characterized hibernacula for 4 females and 7 males (n = 11). Soil temperatures at 3 depths (-10, -30, and -50 cm) were measured near each hibernaculum and compared to random sites. Hibernacula depth averaged 29 ± 2 cm (range 21 to 45 cm). Soil temperatures at hibernacula were colder and warmed later in spring compared to random sites. Female hibernacula were colder ( x ¯ = 2.1 ± 0.03 °C) than those of males ( x ¯ = 2.5 ± 0.02 °C). Hibernacula were mostly north-facing, possessed vegetation cover, and located on average 59.6 ± 19.6 m from perennial water. The consistent selection of hibernacula with physical traits that maintain colder, more stable temperatures emphasizes the importance of conserving microclimatic conditions critical for the recovery of this species, especially amid environmental change.

哺乳动物适应季节变化的环境对生存和健康至关重要。当资源有限时,一些哺乳动物会迁徙或改变它们的行为,而另一些哺乳动物则会冬眠——这种策略可以节省大量的季节性代谢。在冬眠期间,体温和代谢率都降低了,最大限度地减少了能量消耗。然而,当冬眠温度下降到低于体温设定值时,哺乳动物必须增加体温调节输出来维持体温。因此,冬眠的热特性在决定越冬代谢消耗方面起着至关重要的作用。确定了濒危物种新墨西哥跳鼠(Zapus luteus)的冬眠地点,描述了其冬眠的物理特征,并比较了冬眠地点和随机选择地点的土壤温度。此外,我们还探讨了冬眠地环境空气和土壤温度之间的关系,以了解它们对热缓冲和小气候条件稳定性的影响。从2019年到2021年,在亚利桑那州和科罗拉多州,我们追踪了新墨西哥州跳入冬眠的老鼠,以确认冬眠的地点。我们使用无线电遥测和无源集成应答器标签与先验标准来识别地下位置。我们确认并鉴定了4名女性和7名男性(n = 11)的冬眠。在每个冬眠地附近测量3个深度(-10、-30和-50 cm)的土壤温度,并与随机地点进行比较。冬眠深度平均为29±2厘米(范围为21至45厘米)。与随机地点相比,冬眠地的土壤温度在春天晚些时候变冷变暖。雌性冬眠温度(x¯= 2.1±0.03°C)高于雄性冬眠温度(x¯= 2.5±0.02°C)。冬眠地多朝北,有植被覆盖,平均位于距多年生水体59.6±19.6 m处。冬虫夏草始终选择具有保持更冷、更稳定温度的物理特征的冬虫夏草,这强调了保护小气候条件的重要性,这对该物种的恢复至关重要,尤其是在环境变化的情况下。
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引用次数: 0
Climate change drives habitat specialization and local extirpation, causing niche reduction in an endemic chipmunk. 气候变化导致栖息地专业化和局部灭绝,导致特有花栗鼠的生态位减少。
IF 1.6 3区 生物学 Q2 ZOOLOGY Pub Date : 2025-09-25 eCollection Date: 2025-12-01 DOI: 10.1093/jmammal/gyaf059
Hailey N Jacobson, Jennifer K Frey

Climate change is a driver of species extirpation, particularly for local endemics. The niche reduction hypothesis provides a conceptual framework to understand how the realized niche of a declining species is reduced from its historical niche to its contemporary niche due to threats. The Organ Mountains Colorado Chipmunk (Neotamias quadrivittatus australis) is an example of an endemic montane mammal for which climate change may be a threat. We used occupancy models developed for historical sites to evaluate the extent of extirpations and their causes. We used occupancy models developed for random sites to evaluate the contemporary distribution and realized niche. Our results suggest that the Organ Mountains Colorado Chipmunk has undergone broadscale extirpation (extirpated from 64% of sites) with a lower elevation range boundary contraction of 262 m in the past 30 yr. Chipmunks were extirpated from hotter and more arid biotic communities and persisted in drainages that provide cooler and more mesic conditions. Chipmunks avoided conifer forest, which were an integral part of their historical niche, suggesting that the Organ Mountains Colorado Chipmunk may have undergone a reduction in its realized niche. The Organ Mountains Colorado Chipmunk has become a de facto "functional habitat specialist" restricted to climate change refugia, further increasing its vulnerability to climate change and other threats.

气候变化是物种灭绝的驱动因素,特别是对当地特有物种而言。生态位减少假说提供了一个概念性的框架来理解一个物种的生态位是如何由于威胁而从历史生态位减少到当代生态位的。Organ Mountains Colorado Chipmunk (Neotamias quadrivittatus australis)是一种特有的山地哺乳动物,气候变化可能对其构成威胁。我们使用为历史遗址开发的占用模型来评估灭绝的程度及其原因。我们使用为随机地点开发的占用模型来评估当代分布和实现的生态位。结果表明,在过去30年里,器官山科罗拉多花栗鼠经历了大规模的灭绝(64%的地点灭绝),海拔范围边界缩小了262 m。花栗鼠从更热、更干旱的生物群落中灭绝,并在更冷、更温和的环境中生存。花栗鼠避开了针叶林,这是它们历史生态位的一个组成部分,这表明科罗拉多花栗鼠的器官山可能经历了其实现生态位的减少。风琴山科罗拉多花栗鼠已经成为事实上的“功能性栖息地专家”,仅限于气候变化避难所,进一步增加了它对气候变化和其他威胁的脆弱性。
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引用次数: 0
Sleeping giants: temporal, seasonal, and spatial variations in the 24-h activity budget of Hippopotamus amphibius. 沉睡巨人:两栖河马24小时活动预算的时间、季节和空间变化。
IF 1.6 3区 生物学 Q2 ZOOLOGY Pub Date : 2025-09-19 eCollection Date: 2025-12-01 DOI: 10.1093/jmammal/gyaf068
Victoria L Inman, Keith E A Leggett

Understanding animal activity budgets is essential for assessing habitat use and ecological roles, with important implications for conservation. Despite their ecological significance, the behavior of Common Hippopotamus (Hippopotamus amphibius) remains poorly studied, particularly at night. This study aimed to (i) quantify the 24-h activity budget of hippos; (ii) evaluate how behavior changed over the day and varied seasonally; (iii) examine how behavior varied between different areas; and (iv) between age classes. This study presents the first 24-h observational activity budget of hippos and the first behavioral data from Botswana. Hippo behavior varied significantly by time of day, season, study area, and age class. Hippos exhibited a well-defined circadian rhythm, with activity peaking and dipping at sunrise, sunset, around midday, and midnight. Contrary to the persistent assumption that hippos rest in water by day and graze on land all night, hippos in this study fed during only a quarter of the night and were active for a similar proportion of the day. Hippos often spent hours of the day on land feeding or basking in the sun, challenging the idea that they rely heavily on water to prevent their skin from cracking. Resting and feeding behaviors varied with fluctuating water levels, with aquatic vegetation playing a more significant role in their diet than previously assumed. These findings provide valuable insights into hippo ecology and can help predict how they may respond to environmental changes, particularly in regions experiencing increasing human pressures.

了解动物活动预算对于评估栖息地的利用和生态作用至关重要,对保护具有重要意义。尽管它们具有重要的生态意义,但对普通河马(两栖河马)的行为研究仍然很少,特别是在夜间。本研究旨在(i)量化河马的24小时活动预算;(ii)评估行为在一天中的变化和季节变化;(iii)研究不同地区之间的行为差异;(四)不同年龄组别之间。本研究提出了第一个24小时观察河马的活动预算和第一个来自博茨瓦纳的行为数据。河马的行为在一天中的不同时间、季节、研究区域和年龄阶层有显著差异。河马表现出明确的昼夜节律,其活动在日出、日落、中午和午夜前后达到高峰和低谷。与河马白天在水里休息,晚上在陆地上吃草的假设相反,在这项研究中,河马只在夜间的四分之一的时间里进食,而在白天的四分之一的时间里活动。河马每天经常花几个小时在陆地上进食或晒太阳,挑战了它们严重依赖水来防止皮肤开裂的想法。休息和摄食行为随着水位的波动而变化,水生植被在它们的饮食中扮演的角色比之前认为的更重要。这些发现为河马生态学提供了有价值的见解,并有助于预测它们如何应对环境变化,特别是在人类压力日益增加的地区。
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引用次数: 0
How many mammal species are there now? Updates and trends in taxonomic, nomenclatural, and geographic knowledge. 现在有多少种哺乳动物?分类、命名和地理知识的更新和趋势。
IF 1.6 3区 生物学 Q2 ZOOLOGY Pub Date : 2025-09-14 eCollection Date: 2025-10-01 DOI: 10.1093/jmammal/gyaf047
Connor J Burgin, Jelle S Zijlstra, Madeleine A Becker, Heru Handika, Jesse M Alston, Jane Widness, Schuyler Liphardt, David G Huckaby, Nathan S Upham
<p><p>The Mammal Diversity Database (MDD) is an open-access resource providing up-to-date taxonomic, nomenclatural, and geographic data for global mammal species. Since its launch in 2018, the MDD has transformed the traditionally static process of updating mammalian taxonomy into regular online releases reflecting the latest published research. To build on this foundation, we here present version 2.0 of the MDD (MDD2), which catalogs 6,759 living and recently extinct mammal species, representing net increases of 4.1% and 24.8% over MDD version 1.0 and <i>Mammal Species of the World</i>, 3rd edition (MSW3), respectively. Additionally, we identify a net increase of 68.8% (+2,754; 3,149 splits + de novo, 395 lumps) species since 1980 at a rate of ∼65 species/yr based on past totals from 14 mammalian compendia, leading to projections of ∼7,079 species by 2030 and ∼8,376 by 2050 if these trends continue. Key updates in MDD2 include: (i) codings of US state, country, continent, and biogeographic realm geographic categories for each species; (ii) a comprehensive nomenclatural dataset for 50,230 valid and synonymous species-rank names, curated with type locality and specimen information for the first time; and (iii) integration between the MDD and the databases Hesperomys and Batnames for greater data accuracy and completeness. These updates bridge critical gaps in the taxonomic and nomenclatural information needed for ongoing revisions and assessments of mammalian species diversity. Using these data, we evaluate temporal and geographic trends over the past 267 yr, identifying 4 major time periods of change in mammalian taxonomy and nomenclature: (i) the initial monographic description of traditionally charismatic species (1758 to 1880); (ii) the peak of descriptive taxonomy, describing subspecies, and publishing in journals (1881 to 1939); (iii) the shift toward revisionary taxonomy and recognizing polytypic species (1940 to 1999); and (iv) the current technology-driven period of integrative revisionary taxonomy (2000 to present). Geographically, new species recognition since MSW3 has been concentrated in equatorial, mountainous, and island regions-highlighting areas of high mammal endemism (e.g., Madagascar, Philippines, Andes, East Africa, Himalayas, Atlantic Forest). However, gaps in 21st-century taxonomic activity are identified in West and Central Africa, India, and some parts of Indonesia. Additionally, lagging conservation assessments are alarming, with 25% of the MDD2-recognized mammal species allocated to the "understudied" conservation threat categories of Data Deficient (11%) or Not Evaluated (14%), underscoring the need for greater taxonomic integration with conservation organizations. Governance advancements in MDD2 include the establishment of external taxonomic subcommittees to guide data collection and curation, a rewritten website that improves access and scalability, a cross-platform mobile application that provides offline access, an
哺乳动物多样性数据库(MDD)是一个开放获取的资源,提供全球哺乳动物物种最新的分类、命名和地理数据。自2018年推出以来,MDD已将传统的静态哺乳动物分类更新过程转变为定期在线发布,反映最新发表的研究成果。在此基础上,我们推出了MDD 2.0版(MDD2),收录了6759种现存和最近灭绝的哺乳动物,分别比MDD 1.0版和世界哺乳动物物种第三版(MSW3)净增长4.1%和24.8%。此外,根据14个哺乳动物纲要的过去总数,我们确定自1980年以来净增加68.8%(+2,754;3,149分裂+新生,395块),以每年约65种的速度增加,如果这种趋势继续下去,到2030年和2050年将分别增加到约7,079和8,376种。MDD2的主要更新包括:(i)每个物种的美国州、国家、大陆和生物地理领域地理类别的编码;(ii)一个包含50,230个有效和同义物种等级名称的综合命名数据集,首次收录了类型位置和标本信息;以及(iii) MDD与数据库Hesperomys和Batnames的整合,以提高数据的准确性和完整性。这些更新弥补了正在进行的哺乳动物物种多样性修订和评估所需的分类学和命名学信息的重大空白。利用这些数据,我们评估了过去267年的时间和地理趋势,确定了哺乳动物分类学和命名法的4个主要变化时期:(i)传统魅力物种的初始专题描述(1758年至1880年);(ii) 1881 ~ 1939年是描述分类学、亚种描述和期刊发表的高峰时期;(iii)向修正分类学和多型种识别的转变(1940 - 1999);(iv)当前技术驱动的综合修订分类法时期(2000年至今)。在地理上,自MSW3以来,新物种的发现主要集中在赤道、山区和岛屿地区,这些地区是哺乳动物高度特有的地区(如马达加斯加、菲律宾、安第斯山脉、东非、喜马拉雅山、大西洋森林)。然而,在西非和中非、印度和印度尼西亚的一些地区发现了21世纪分类活动的空白。此外,保护评估的滞后令人担忧,有25%的mdd2认可的哺乳动物物种被分配到数据不足(11%)或未评估(14%)的“研究不足”保护威胁类别,这突显了与保护组织进行更大分类整合的必要性。MDD2在治理方面取得的进展包括:建立外部分类学小组委员会,指导数据收集和管理;重写网站,改善访问和可扩展性;提供离线访问的跨平台移动应用程序;建立新的伙伴关系,继续将MDD数据与全球生物多样性基础设施联系起来。通过提供最新的哺乳动物分类学和命名学数据——包括原始名称描述、类型定位和类型标本收集的链接——MDD为哺乳动物学家和自然资源保护主义者提供了一个综合资源,使他们更容易跟踪他们所研究的生物的状态。
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引用次数: 0
Annual, seasonal, and daily space-use of Common Fallow Deer (Dama dama) in Australian agricultural landscapes. 澳大利亚农业景观中普通小鹿(Dama Dama)的年度、季节性和日常空间利用。
IF 1.6 3区 生物学 Q2 ZOOLOGY Pub Date : 2025-09-14 eCollection Date: 2025-10-01 DOI: 10.1093/jmammal/gyaf051
Sebastien Comte, Andrew J Bengsen, Lee Parker, David M Forsyth

The Common Fallow Deer (Dama dama; hereafter "fallow deer") has been widely translocated from its native Mediterranean range and is now present on all continents except Antarctica. In some countries-such as Australia-introduced populations of fallow deer have increased in range and abundance, negatively affecting agricultural production. However, little is known about how this species uses these agricultural landscapes annually, seasonally, or daily. We used GPS collars to track the hourly movements of 68 adult fallow deer (25 males, 43 females) at 3 sites in mixed pastoral farmland (a mosaic of open eucalypt woodland and pasture) in eastern Australia between 2020 and 2024. We estimated annual and monthly home ranges, daily distance moved, and diel movement cycles. As expected, annual home ranges (using the biased random bridge method) were larger for males (median = 1,848.1 ha, 95% CrI: 929.2 to 3,584.0 ha) than females (median = 646.3 ha, 95% CrI: 368.1 to 1,068.5 ha), and home ranges and core areas were similar across the 3 sites. Both sexes had a strong crepuscular movement pattern that was consistent across sites. Male fallow deer increased their movement rates in April-May (i.e., during the mating season), and their movement patterns were most restricted during summer. Female fallow deer movements were more consistent across the year than those of males, but movement patterns were also most restricted during summer. There was substantial individual variation in daily movement patterns between and within sites, especially during the mating season. Most individuals exhibited strong site fidelity, but some males and females made short excursions (up to a week and 10 km) from their home range. The strong site fidelity of fallow deer suggests that management strategies utilizing repeated culling will be most effective at reducing overabundant fallow deer populations in Australian agricultural landscapes.

普通的小鹿(Dama Dama;以下简称“小鹿”)已经从其原产于地中海的范围广泛转移到现在除了南极洲以外的所有大陆。在一些国家,如澳大利亚,引进的黇鹿种群在范围和数量上都有所增加,对农业生产产生了负面影响。然而,人们对这个物种如何每年、每季度或每天利用这些农业景观知之甚少。在2020年至2024年期间,我们使用GPS项圈跟踪了澳大利亚东部混合田园农田(开放式桉树林地和牧场的马赛克)的3个地点的68只成年黇鹿(25只雄性,43只雌性)的每小时运动。我们估计了每年和每月的家庭范围,每天移动的距离,和死亡的运动周期。正如预期的那样,男性的年住房范围(使用有偏随机桥法)比女性(中位数= 646.3公顷,95% CrI: 368.1至1,068.5公顷)更大(中位数= 1,848.1公顷,95% CrI: 929.2至3,584.0公顷),并且三个站点的住房范围和核心区域相似。两性都有强烈的黄昏运动模式,在各个部位是一致的。雄鹿在4 - 5月(即交配季节)活动频率增加,在夏季活动模式受限制最大。雌鹿全年的活动比雄鹿更一致,但在夏季的活动模式也最受限制。在地点之间和地点内的日常活动模式有很大的个体差异,特别是在交配季节。大多数个体表现出较强的地点保真度,但一些雄性和雌性会短途旅行(长达一周和10公里)。在澳大利亚农业景观中,利用重复扑杀的管理策略将最有效地减少过多的黇鹿种群。
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引用次数: 0
Semi-automated identification of individual big brown bats via collagen-elastin patterns in the wing membrane. 通过翅膀膜上的胶原-弹性蛋白模式半自动识别单个大棕蝠。
IF 1.6 3区 生物学 Q2 ZOOLOGY Pub Date : 2025-08-30 eCollection Date: 2025-10-01 DOI: 10.1093/jmammal/gyaf048
Shane D I Seheult, Joshua R M Cherney, Paul A Faure

Collagen-elastin (CE) bundle patterns in the wing membrane have been used to identify individual bats; however, this method has not been widely adopted, likely owing to the laborious nature of manually comparing wing images through visual inspection. We tested the effectiveness of using an accessible, feature-based, pattern-recognition software-HotSpotter-to identify individuals using patterns of CE bundles in the bat wing. We collected photos from 24 adult (n = 192 photos) big brown bats (Eptesicus fuscus) and their direct offspring (n = 34 pups; n = 136 photos) by illuminating the ventral surface of the wing with ultraviolet light. Upon running a query match comparison on a selected reference image, HotSpotter ranks every other photo in the database based on an assigned similarity score. We found that HotSpotter correctly presented the top-ranked image as another image of the same individual at higher-than-chance performance. The software also performed better than chance when considering matches to images with the same age (adult/juvenile), sex (male/female), wing side (left/right), and known-relatedness (mother-offspring or twin) to the bat in the queried image. The proportion of correct matches increased with the number of top-ranked images included in the initial query. These results are encouraging because they suggest that pattern-recognition software has the potential to automate recognition of bats based on CE bundle patterns in photos of bat wings. With further refinements in the technology, we think it may be possible to achieve nearly 100% accuracy of individual identification.

胶原-弹性蛋白(CE)束在翅膀膜的模式已被用于识别单个蝙蝠;然而,这种方法尚未被广泛采用,可能是由于通过目视检查手动比较机翼图像的费力性。我们测试了使用一个可访问的、基于特征的模式识别软件hotspot的有效性,该软件使用蝙蝠翅膀上CE束的模式来识别个体。用紫外光照射大褐蝠翅腹面,采集了24只成年大褐蝠(n = 192)及其直系后代(n = 34, n = 136)的照片。在选定的参考图像上运行查询匹配比较后,HotSpotter根据指定的相似度评分对数据库中的所有其他照片进行排名。我们发现,HotSpotter正确地将排名靠前的图像显示为同一个人的另一张图像,其表现高于偶然。在考虑与所查询图像中的蝙蝠具有相同年龄(成年/未成年)、性别(雄性/雌性)、翅膀侧面(左/右)和已知亲缘关系(母子或双胞胎)的图像的匹配时,该软件的表现也比偶然要好。正确匹配的比例随着初始查询中包含的排名靠前的图像数量的增加而增加。这些结果令人鼓舞,因为它们表明模式识别软件有潜力根据蝙蝠翅膀照片中的CE束模式自动识别蝙蝠。随着技术的进一步完善,我们认为有可能实现接近100%的个人识别准确率。
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引用次数: 0
Extending mammal specimens with their essential phenotypic traits. 扩展哺乳动物标本及其基本表型特征。
IF 1.6 3区 生物学 Q2 ZOOLOGY Pub Date : 2025-07-26 eCollection Date: 2025-10-01 DOI: 10.1093/jmammal/gyaf062
Bryan S McLean, David Bloom, Edward B Davis, Robert P Guralnick, Sharlene E Santana, Julie M Allen, Heidi Amarilla-Stevens, Kayce C Bell, David C Blackburn, Jeffrey E Bradley, Robert D Bradley, Matthew D Carling, Alexandra Coconis, Jocelyn P Colella, Chris J Conroy, Joseph A Cook, Helena de Bastos Cruz Machado, John R Demboski, Katrina M Derieg, Andrew Doll, John P Dumbacher, William D Duncan, Jonathan L Dunnum, Chris Feldman, Adam W Ferguson, Kendall E Fitzgerald, Maureen E Flannery, Kelly Hood, Angela D Hornsby, Dianna Krejsa, Raphael LaFrance, Jessica E Light, Silvia E Pavan, Shalina Peterson, Adrienne Raniszewski, Eric A Rickart, Shannen Robson, Rebecca J Rowe, Dakota M Rowsey, Alyssa Semerdjian, Theodore Stankowich, Laura Steger, Richard Stevens, Katherine M Thibault, Cody W Thompson, Nathan S Upham, Alyson Wilkins, Elizabeth A Wommack

Natural history collections are repositories of biodiversity specimens that provide critical infrastructure for studies of mammals. Over the past 3 decades, digitization of collections has opened up the temporal and spatial properties of specimens, stimulating new data sharing, use, and training across the biodiversity sciences. These digital records are the cornerstones of an "extended specimen network," in which the diverse data derived from specimens become digital, linked, and openly accessible for science and policy. However, still missing from most digital occurrences of mammals are their morphological, reproductive, and life-history traits. Unlocking this information will advance mammalogy, establish richer faunal baselines in an era of rapid environmental change, and contextualize other types of specimen-derived information toward new knowledge and discovery. Here, we present the Ranges Digitization Network (Ranges), a community effort to digitize specimen-level traits from all terrestrial mammals of western North America, append them to digital records, publish them openly in community repositories, and make them interoperable with complimentary data streams. Ranges is a consortium of 23 institutions with an initial focus on non-marine mammal species (both native and introduced) occurring in western Canada, the western United States, and Mexico. The project will establish trait data standards and informatics workflows that can be extended to other regions, taxa, and traits. Reconnecting mammalogists, museum professionals, and researchers for a new era of collections digitization will catalyze advances in mammalogy and create a community-curated trait resource for training and engagement with global conservation initiatives.

自然历史收藏是生物多样性标本的宝库,为哺乳动物的研究提供了重要的基础设施。在过去的30年里,馆藏的数字化揭示了标本的时空特性,刺激了生物多样性科学领域新的数据共享、使用和培训。这些数字记录是“扩展标本网络”的基石,在该网络中,来自标本的各种数据变得数字化、相互关联,并可用于科学和政策的公开获取。然而,哺乳动物的形态、繁殖和生活史特征在大多数数字事件中仍然缺失。解开这些信息将推动哺乳动物学的发展,在快速环境变化的时代建立更丰富的动物群基线,并将其他类型的标本衍生信息与新知识和发现联系起来。在此,我们提出了Ranges数字化网络(Ranges),这是一项社区努力,旨在将北美西部所有陆源哺乳动物的标本级特征数字化,将它们附加到数字记录中,在社区存储库中公开发布,并使它们与免费数据流互操作。Ranges是一个由23个机构组成的联盟,最初的重点是在加拿大西部、美国西部和墨西哥发生的非海洋哺乳动物物种(包括本地和引进的)。该项目将建立性状数据标准和信息学工作流程,可扩展到其他地区、分类群和性状。将哺乳动物学家、博物馆专业人员和研究人员重新联系起来,迎接数字化收藏的新时代,将促进哺乳动物学的进步,并为培训和参与全球保护倡议创造一个社区策划的特征资源。
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Journal of Mammalogy
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