Pub Date : 2023-01-17DOI: 10.1007/s11692-022-09592-y
Marina De la Cámara, Lieke Ponsioen, Q. J. Horta-Lacueva, K. H. Kapralova
{"title":"The Dynamic Ontogenetic Shape Patterns of Adaptive Divergence and Sexual Dimorphism","authors":"Marina De la Cámara, Lieke Ponsioen, Q. J. Horta-Lacueva, K. H. Kapralova","doi":"10.1007/s11692-022-09592-y","DOIUrl":"https://doi.org/10.1007/s11692-022-09592-y","url":null,"abstract":"","PeriodicalId":50471,"journal":{"name":"Evolutionary Biology","volume":" ","pages":""},"PeriodicalIF":2.5,"publicationDate":"2023-01-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41786913","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-12DOI: 10.1007/s11692-022-09594-w
J. Gerard, M. Maublanc
{"title":"Nothing in the Environment Makes Sense Except in the Light of a Living System: Organisms, Their Relationships to the Environment, and Evolution","authors":"J. Gerard, M. Maublanc","doi":"10.1007/s11692-022-09594-w","DOIUrl":"https://doi.org/10.1007/s11692-022-09594-w","url":null,"abstract":"","PeriodicalId":50471,"journal":{"name":"Evolutionary Biology","volume":"50 1","pages":"18 - 29"},"PeriodicalIF":2.5,"publicationDate":"2023-01-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"48812514","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-12DOI: 10.1007/s11692-022-09595-9
Alaina C. Pfenning-Butterworth, T. C. Sparkes
{"title":"Evolutionary History and host Ecology Determine Acanthocephalan Egg Shape","authors":"Alaina C. Pfenning-Butterworth, T. C. Sparkes","doi":"10.1007/s11692-022-09595-9","DOIUrl":"https://doi.org/10.1007/s11692-022-09595-9","url":null,"abstract":"","PeriodicalId":50471,"journal":{"name":"Evolutionary Biology","volume":"50 1","pages":"137 - 145"},"PeriodicalIF":2.5,"publicationDate":"2023-01-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"43363040","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-10DOI: 10.1007/s11692-022-09591-z
Ammresh, E. Sherratt, V. Thomson, Michael S. Y. Lee, N. Dunstan, L. Allen, Jeff Abraham, A. Palci
{"title":"Island Tiger Snakes (Notechis scutatus) Gain a ‘Head Start’ in Life: How Both Phenotypic Plasticity and Evolution Underlie Skull Shape Differences","authors":"Ammresh, E. Sherratt, V. Thomson, Michael S. Y. Lee, N. Dunstan, L. Allen, Jeff Abraham, A. Palci","doi":"10.1007/s11692-022-09591-z","DOIUrl":"https://doi.org/10.1007/s11692-022-09591-z","url":null,"abstract":"","PeriodicalId":50471,"journal":{"name":"Evolutionary Biology","volume":"50 1","pages":"111 - 126"},"PeriodicalIF":2.5,"publicationDate":"2023-01-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"47992198","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-10DOI: 10.1007/s11692-022-09593-x
P. Iglesias, F. A. Machado, S. Llanes, E. Hasson, E. M. Soto
{"title":"Opportunities and Constraints Imposed by the G matrix of Drosophila buzzatii Wings","authors":"P. Iglesias, F. A. Machado, S. Llanes, E. Hasson, E. M. Soto","doi":"10.1007/s11692-022-09593-x","DOIUrl":"https://doi.org/10.1007/s11692-022-09593-x","url":null,"abstract":"","PeriodicalId":50471,"journal":{"name":"Evolutionary Biology","volume":"50 1","pages":"127 - 136"},"PeriodicalIF":2.5,"publicationDate":"2023-01-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"44375247","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-01Epub Date: 2023-05-23DOI: 10.1007/s11692-023-09605-4
Steven H Ferguson, Jeff W Higdon, Chloe Schmidt, Corinne Pomerleau, Cory J D Matthews
A widespread pattern in vertebrate life-history evolution is for species to evolve towards either fast or slow life histories; however, the underlying causes of this pattern remain unclear. Toothed whales (Odontoceti) are a diverse group with a range of body sizes and life histories, making them an ideal model to investigate potential drivers of this dichotomy. Using ancestral reconstruction, we identified that certain groups of odontocetes evolved more-streamlined, presumably faster, body shapes around the same time that killer whales (Orcinus orca) evolved into whale predators approximately 1 Mya during the Pleistocene. This suggests that the evolution of a streamlined body shape may have been an adaptation to escape killer whale predation, leading to longer life-history events. To test this hypothesis, we performed a cluster analysis of odontocete whales and confirmed the dual pattern of life-history traits, with one group referred to as 'reproducers' characterized by early age of maturity, short gestation, short interbirth interval, and short lifespan, and the other group referred to as 'bet-hedgers' exhibiting the opposite pattern. However, we found that life history grouping was relatively unrelated to whale shape (i.e., more streamlined or less streamlined). Therefore, we incorporated principal component results into mixed effects models, and the model results indicated that body shape was positively related to neonate length (a measure of investment in progeny), but not significantly related to the temporal life-history traits. Thus, whale body shape is not a sufficient explanation for the evolution of fast-slow life histories in odontocete whales.
Supplementary information: The online version contains supplementary material available at 10.1007/s11692-023-09605-4.
{"title":"Investigating the Relationship Between Body Shape and Life History Traits in Toothed Whales: Can Body Shape Predict Fast-Slow Life Histories?","authors":"Steven H Ferguson, Jeff W Higdon, Chloe Schmidt, Corinne Pomerleau, Cory J D Matthews","doi":"10.1007/s11692-023-09605-4","DOIUrl":"10.1007/s11692-023-09605-4","url":null,"abstract":"<p><p>A widespread pattern in vertebrate life-history evolution is for species to evolve towards either fast or slow life histories; however, the underlying causes of this pattern remain unclear. Toothed whales (Odontoceti) are a diverse group with a range of body sizes and life histories, making them an ideal model to investigate potential drivers of this dichotomy. Using ancestral reconstruction, we identified that certain groups of odontocetes evolved more-streamlined, presumably faster, body shapes around the same time that killer whales (<i>Orcinus orca</i>) evolved into whale predators approximately 1 Mya during the Pleistocene. This suggests that the evolution of a streamlined body shape may have been an adaptation to escape killer whale predation, leading to longer life-history events. To test this hypothesis, we performed a cluster analysis of odontocete whales and confirmed the dual pattern of life-history traits, with one group referred to as 'reproducers' characterized by early age of maturity, short gestation, short interbirth interval, and short lifespan, and the other group referred to as 'bet-hedgers' exhibiting the opposite pattern. However, we found that life history grouping was relatively unrelated to whale shape (i.e., more streamlined or less streamlined). Therefore, we incorporated principal component results into mixed effects models, and the model results indicated that body shape was positively related to neonate length (a measure of investment in progeny), but not significantly related to the temporal life-history traits. Thus, whale body shape is not a sufficient explanation for the evolution of fast-slow life histories in odontocete whales.</p><p><strong>Supplementary information: </strong>The online version contains supplementary material available at 10.1007/s11692-023-09605-4.</p>","PeriodicalId":50471,"journal":{"name":"Evolutionary Biology","volume":"50 3","pages":"300-317"},"PeriodicalIF":1.9,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10415445/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10352045","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2023-01-01Epub Date: 2022-11-30DOI: 10.1007/s11692-022-09579-9
Evgeni Bolotin, Daniel Melamed, Adi Livnat
Cases of parallel or recurrent gene fusions in evolution as well as in genetic disease and cancer are difficult to explain, because unlike point mutations, they can require the repetition of a similar configuration of multiple breakpoints rather than the repetition of a single point mutation. The used-together-fused-together hypothesis holds that genes that are used together repeatedly and persistently in a specific context are more likely to undergo fusion mutation in the course of evolution for mechanistic reasons. This hypothesis offers to explain gene fusion in both evolution and disease under one umbrella. Using bioinformatic data, we tested this hypothesis against alternatives, including that all gene pairs can fuse by random mutation, but among pairs thus fused, those that had interacted previously are more likely to be favored by selection. Results show that across multiple measures of gene interaction, human genes whose orthologs are fused in one or more species are more likely to interact with each other than random pairs of genes of the same genomic distance between pair members; that an overlap exists between genes that fused in the course of evolution in non-human species and genes that undergo fusion in human cancers; and that across six primate species studied, fusions predominate over fissions and exhibit substantial evolutionary parallelism. Together, these results support the used-together-fused-together hypothesis over its alternatives. Multiple implications are discussed, including the relevance of mutational mechanisms to the evolution of genome organization, to the distribution of fitness effects of mutation, to evolutionary parallelism and more.
Supplementary information: The online version contains supplementary material available at 10.1007/s11692-022-09579-9.
{"title":"Genes that are Used Together are More Likely to be Fused Together in Evolution by Mutational Mechanisms: A Bioinformatic Test of the Used-Fused Hypothesis.","authors":"Evgeni Bolotin, Daniel Melamed, Adi Livnat","doi":"10.1007/s11692-022-09579-9","DOIUrl":"10.1007/s11692-022-09579-9","url":null,"abstract":"<p><p>Cases of parallel or recurrent gene fusions in evolution as well as in genetic disease and cancer are difficult to explain, because unlike point mutations, they can require the repetition of a similar configuration of multiple breakpoints rather than the repetition of a single point mutation. The used-together-fused-together hypothesis holds that genes that are used together repeatedly and persistently in a specific context are more likely to undergo fusion mutation in the course of evolution for mechanistic reasons. This hypothesis offers to explain gene fusion in both evolution and disease under one umbrella. Using bioinformatic data, we tested this hypothesis against alternatives, including that all gene pairs can fuse by random mutation, but among pairs thus fused, those that had interacted previously are more likely to be favored by selection. Results show that across multiple measures of gene interaction, human genes whose orthologs are fused in one or more species are more likely to interact with each other than random pairs of genes of the same genomic distance between pair members; that an overlap exists between genes that fused in the course of evolution in non-human species and genes that undergo fusion in human cancers; and that across six primate species studied, fusions predominate over fissions and exhibit substantial evolutionary parallelism. Together, these results support the used-together-fused-together hypothesis over its alternatives. Multiple implications are discussed, including the relevance of mutational mechanisms to the evolution of genome organization, to the distribution of fitness effects of mutation, to evolutionary parallelism and more.</p><p><strong>Supplementary information: </strong>The online version contains supplementary material available at 10.1007/s11692-022-09579-9.</p>","PeriodicalId":50471,"journal":{"name":"Evolutionary Biology","volume":"50 1","pages":"30-55"},"PeriodicalIF":1.9,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9925542/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10767184","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-12-30DOI: 10.1007/s11692-022-09590-0
L. Courtenay
{"title":"Can we Restore Balance to Geometric Morphometrics? A Theoretical Evaluation of how Sample Imbalance Conditions Ordination and Classification","authors":"L. Courtenay","doi":"10.1007/s11692-022-09590-0","DOIUrl":"https://doi.org/10.1007/s11692-022-09590-0","url":null,"abstract":"","PeriodicalId":50471,"journal":{"name":"Evolutionary Biology","volume":"50 1","pages":"90 - 110"},"PeriodicalIF":2.5,"publicationDate":"2022-12-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"46684337","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-12-02DOI: 10.1007/s11692-022-09589-7
Manuela V. dos Santos, A. Prudente, M. T. Rodrigues, M. Sturaro
{"title":"Correction to: The Role of Vicariance and Paleoclimatic Shifts in the Diversification of Uranoscodon superciliosus (Squamata, Tropiduridae) of the Amazonian Floodplains","authors":"Manuela V. dos Santos, A. Prudente, M. T. Rodrigues, M. Sturaro","doi":"10.1007/s11692-022-09589-7","DOIUrl":"https://doi.org/10.1007/s11692-022-09589-7","url":null,"abstract":"","PeriodicalId":50471,"journal":{"name":"Evolutionary Biology","volume":"50 1","pages":"146 - 146"},"PeriodicalIF":2.5,"publicationDate":"2022-12-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"47855252","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2022-12-01DOI: 10.1007/s11692-022-09587-9
G. Estivals, F. Duponchelle, C. Garcia-Davila, U. Römer, C. Mariac, J. Renno
{"title":"Exceptional Genetic Differentiation at a Micro-geographic Scale in Apistogramma agassizii (Steindachner, 1875) from the Peruvian Amazon: Sympatric Speciation?","authors":"G. Estivals, F. Duponchelle, C. Garcia-Davila, U. Römer, C. Mariac, J. Renno","doi":"10.1007/s11692-022-09587-9","DOIUrl":"https://doi.org/10.1007/s11692-022-09587-9","url":null,"abstract":"","PeriodicalId":50471,"journal":{"name":"Evolutionary Biology","volume":"50 1","pages":"1 - 17"},"PeriodicalIF":2.5,"publicationDate":"2022-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41539535","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}