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Biogeographic Changes in a High Latitude Marine Fish Community: Short-Time Reversals in Response to Climate Variation 高纬度海洋鱼类群落的生物地理变化:响应气候变化的短期逆转
IF 4.2 2区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2025-11-19 DOI: 10.1111/ddi.70114
Kari Elsa Ellingsen, Andrey V. Dolgov, Kenneth T. Frank, Edda Johannesen, Vidar Surén Lien, Nancy Louise Shackell, Torkild Tveraa, Nigel Gilles Yoccoz

Aim

Determine whether changes in fish biogeographic composition and key facets of biodiversity are reversible at short time scales in a high latitude marine ecosystem experiencing ocean warming in the context of a recent short-term cooling, and an increasing then declining dominant apex predator population.

Location

Barents Sea.

Methods

Survey data from an 18-year time series of demersal fish communities, delineated as Arctic, Arctic-boreal and boreal assemblages, was used to examine temporal changes in (i) biogeographic composition across the Barents Sea, (ii) taxonomic, functional and phylogenetic (alpha) diversity at a sub-regional scale and relationships to abiotic and biotic drivers, and (iii) beta diversity at regional and sub-regional scales.

Results

Community composition changes across the Barents Sea that were attributed to ocean warming showed signs of a reversal during short-term cooling. At a sub-regional scale, several biodiversity measures showed a reversal of changes in the north-east, but different biodiversity measures as well as abiotic and biotic drivers revealed distinct patterns and trends. Species richness of the Arctic-boreal group increased but then declined in the north-east, while species richness of the Arctic group showed a persistent decline.

Main Conclusions

Our approach of dividing the Barents Sea into sub-regions and different biogeographical groups revealed patterns that were different from those observed at a large spatial scale and for whole communities. The Barents Sea is heterogeneous regarding temporal changes in diversity, and the recovery potential of fish communities varies among biogeographical groups. Such heterogeneity needs to be accounted for in future conservation strategies and ecosystem-based management.

目的确定高纬度海洋生态系统中鱼类生物地理组成和生物多样性关键方面的变化在短期尺度上是否可逆,在近期短期变冷的背景下经历海洋变暖,以及优势顶端捕食者数量的增加和减少。位置:巴伦支海。方法利用18年的北极、北极-北方和北方底栖鱼类群落调查数据,分析了巴伦支海生物地理组成、亚区域尺度上的分类、功能和系统发育(α)多样性及其与非生物和生物驱动因素的关系。(3)区域和次区域尺度上的β多样性。结果由于海洋变暖导致的跨巴伦支海生物群落组成变化在短期变冷期间呈现逆转迹象。在分区域尺度上,东北地区的生物多样性指标表现出逆转的趋势,但不同的生物多样性指标以及生物和非生物驱动因素表现出不同的模式和趋势。东北地区北极-北方类群物种丰富度呈先上升后下降趋势,而北极类群物种丰富度呈持续下降趋势。我们将巴伦支海划分为子区域和不同生物地理类群的方法显示出与大空间尺度和整个群落不同的格局。巴伦支海在多样性的时间变化方面具有异质性,鱼类群落的恢复潜力因生物地理类群而异。这种异质性需要在未来的保护战略和基于生态系统的管理中加以考虑。
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引用次数: 0
Effects of Species Richness and Turnover on Ecosystem Functioning in Heterogeneous Environments of Two Tropical Mountains 两个热带山地异质环境中物种丰富度和迁移对生态系统功能的影响
IF 4.2 2区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2025-11-17 DOI: 10.1111/ddi.70093
Annemarie Wurz, Jörg Albrecht, Katrin Böhning-Gaese, Roland Brandl, Eike Lena Neuschulz, Jörg Bendix, Markus Fischer, Andreas Hemp, Jürgen Homeier, Ralf Kiese, Yakov Kuzyakov, Christoph Leuschner, Marcell K. Peters, Stefan Scheu, Ingolf Steffan-Dewenter, Andre Velescu, Wolfgang Wilcke, Matthias Schleuning, Nina Farwig
<div> <section> <h3> Aim</h3> <p>Progress has been made in understanding the relationship between biodiversity and ecosystem functioning (BEF) in both experimental and real-world ecosystems. Yet, we have a limited understanding of the extent to which biodiversity affects ecosystem functioning in heterogeneous environments and whether variation in ecosystem functioning between communities is related to variation in species richness or turnover. Here, we quantify the relative contribution of variation in species richness and species turnover to variation in ecosystem functioning between communities (i.e., the diversity effect) along two tropical elevational gradients.</p> </section> <section> <h3> Location</h3> <p>Andes (Ecuador) and Mt. Kilimanjaro (Tanzania).</p> </section> <section> <h3> Taxa Studied</h3> <p>Woody plants, springtails, soil arthropods, ants and frugivorous birds.</p> </section> <section> <h3> Methods</h3> <p>We collected data on seven ecosystem functions, including biomass and process rates, across six ecosystem types along the two elevational gradients. We then combine the ecological Price equation with the concept of β-diversity to quantify how the diversity effect is shaped by environmental heterogeneity within and across ecosystem types, and whether the effect of environmental heterogeneity is primarily mediated by variation in species richness or species turnover.</p> </section> <section> <h3> Results</h3> <p>The diversity effect on ecosystem functioning increased consistently with environmental heterogeneity on both mountains. Species richness and turnover, on average, contributed similarly to the diversity effect on ecosystem functioning in both mountain regions, but effect sizes varied across functions. The increase in the diversity effect with environmental heterogeneity was primarily mediated by species richness, while species turnover played a secondary role in mediating the effects of environmental heterogeneity.</p> </section> <section> <h3> Main Conclusions</h3> <p>Our study reveals that the diversity effect on ecosystem functioning increases with environmental heterogeneity and that species richness, rather than species turnover, primarily drives this relationship. The dominant role of species richness in mediating the effect of environmental heterogeneity indicates that BEF relationships along environmental gradient
目的生物多样性与生态系统功能(BEF)关系的研究在实验生态系统和现实生态系统中都取得了进展。然而,我们对生物多样性对异质环境中生态系统功能的影响程度以及群落间生态系统功能的变化是否与物种丰富度或周转的变化有关的了解有限。在这里,我们量化了物种丰富度和物种周转变化对群落间生态系统功能变化(即多样性效应)的相对贡献。地理位置安第斯山脉(厄瓜多尔)和乞力马扎罗山(坦桑尼亚)。分类群研究木本植物、弹尾、土壤节肢动物、蚂蚁和食果鸟类。方法收集了沿海拔梯度分布的6种生态系统类型的7种生态系统功能数据,包括生物量和过程速率。然后,我们将生态Price方程与β-多样性的概念结合起来,量化生态系统类型内部和不同类型的环境异质性如何塑造多样性效应,以及环境异质性的影响是否主要由物种丰富度变化或物种更替介导。结果多样性对生态系统功能的影响随环境异质性的增加而增加。物种丰富度和周转量对生态系统功能的影响相似,但不同功能的影响大小不同。多样性效应随环境异质性的增加主要由物种丰富度介导,而物种更替在环境异质性的中介作用中起次要作用。研究表明,多样性对生态系统功能的影响随着环境异质性的增加而增加,物种丰富度而不是物种更替是这种关系的主要驱动因素。物种丰富度在调节环境异质性效应中的主导作用表明,生物多样性在环境梯度上的关系受到限制本地物种共存的环境过滤器的强烈影响。
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引用次数: 0
Advancing Marine Conservation: Metabarcoding and Metaphylogeography for a Multi-Year Biomonitoring of Benthic Communities of National Parks Across Two Seas 推进海洋保护:跨两海国家公园底栖生物群落多年生物监测的元条形码和元地理
IF 4.2 2区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2025-11-17 DOI: 10.1111/ddi.70121
X. Turon, O. S. Wangensteen, J. Zarcero, C. Palacin, A. Antich

Aim

We have applied a combined metabarcoding and metaphylogeography approach to temporal monitoring of marine protected areas. Biomonitoring is central to conservation, and new molecular methods, in particular metabarcoding-based techniques, are changing our ability to track diversity in space and time. Protected areas are a cornerstone of conservation policies whose correct management requires sound time series data.

Location

Two Spanish National Parks with maritime domain, situated in two biogeographic regions, one in the Mediterranean and the other in the Atlantic. We compiled a multi-year dataset spanning 9 years based on direct sampling of representative benthic communities in these parks.

Methods

We used as a marker a fragment of the cytochrome oxidase I (COI) gene, amplified with generalist primers. We developed a bioinformatic pipeline based on establishing sample-wise exact sequence variants (ESVs) using stringent denoising and filtering methods. ESVs were clustered into molecular operational taxonomic units (OTUs) at the end of the study period, and we combined α- and β-diversity estimates with metaphylogeographic analyses.

Results

We uncovered a rich biodiversity, with ca. 27,000 ESVs and 5500 eukaryotic OTUs, with significant β-diversity variation across the studied factors, in the order parks > communities > years. The patterns of genetic differentiation within OTUs matched those of β-diversity. A temporal pattern emerged, as the communities' structure changed when comparing the initial and final periods of our monitoring, with a marked decline in richness and diversity.

Main Conclusions

Biodiversity varied strongly with geography, community type and year, shaping both species turnover and genetic connectivity. Differentiation was evident even at short spatial scales, such as between communities. A concerning loss of diversity was detected over the study period, likely related to global change. We showcased the feasibility and effectiveness of combining metabarcoding with metaphylogeography for monitoring and conservation efforts in marine protected areas and elsewhere.

目的应用元条形码和元地理相结合的方法对海洋保护区进行时序监测。生物监测是生物保护的核心,新的分子方法,特别是基于元条形码的技术,正在改变我们在空间和时间上追踪多样性的能力。保护区是保护政策的基石,其正确管理需要可靠的时间序列数据。两个西班牙国家公园,位于两个生物地理区域,一个在地中海,另一个在大西洋。我们基于这些公园中代表性底栖生物群落的直接抽样编制了一个跨越9年的多年数据集。方法用通用引物扩增细胞色素氧化酶I (COI)基因片段作为标记物。我们开发了一个基于建立样本精确序列变异(esv)的生物信息学管道,使用严格的去噪和滤波方法。在研究结束时,我们将esv聚类成分子操作分类单位(OTUs),并将α-和β-多样性估计与metaphylogeographical分析相结合。结果发现了丰富的生物多样性,约有27,000个esv和5500个真核otu,在研究因子之间存在显著的β-多样性变化,以公园>;群落>;年为单位。otu内部的遗传分化模式与β-多样性模式相匹配。在监测初期和后期,群落结构发生了变化,丰富度和多样性明显下降。生物多样性因地理、群落类型和年份的不同而有明显差异,影响着物种更替和遗传连通性。即使在较短的空间尺度上,如群落间,差异也很明显。在研究期间发现了令人担忧的多样性丧失,可能与全球变化有关。我们展示了将元条形码与metaphylogeography结合起来用于海洋保护区和其他地方的监测和保护工作的可行性和有效性。
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引用次数: 0
Tree Diversity and Carbon Stocks in Seasonally Flooded and Terra Firme Forests in the Inner Congo Basin 刚果盆地内季节性淹水和原生林的树木多样性和碳储量
IF 4.2 2区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2025-11-11 DOI: 10.1111/ddi.70118
Modestine Kompanyi, Wannes Hubau, Jean-Remy Makana, John Hart, Terese Hart, Adeline Fayolle

Aim

Forest plots are a benchmark tool to quantify aboveground carbon (AGC) stocks and biodiversity in tropical forests. However, atypical edaphic forest types such as seasonally flooded forests or forests on sandy soil are scarce in the plot networks, despite their widespread occurrence. This study assessed how edaphic conditions shape tropical forests, in terms of forest structure, tree diversity and composition.

Location

Lomami National Park in the Democratic Republic of Congo.

Methods

We installed 89 plots of 0.25 ha each in the understudied southeastern Congo basin. Plots are spread over eight different combinations of flooding regime (seasonally flooded vs. terra firme), soil texture (clay vs. sand) and region (north vs. south). We tested the influence of flooding regime, soil texture and region on structural attributes, tree diversity, and tree species composition. We also assessed relationships between structural attributes, diversity indices, and compositional gradients.

Results

We inventoried 9156 trees and identified a total of 416 tree species, with 93 species (22.4%) belonging to the Fabaceae family. Species diversity is much higher in terra firme than in seasonally flooded forests. The latter also shows a different species composition but holds similar AGC (163 Mg C ha−1 on average). We also found that region influences both species diversity and structural attributes (diversity and AGC highest in the north), while soil texture only influences structural attributes (AGC highest on clay). Finally, we found that structural attributes are independent of diversity indices at different scales.

Main Conclusions

This study describes for the first time the forests in the southeastern Congo basin, which show a high degree of structural variability, high tree biodiversity and important carbon stocks. The region merits further exploration, with specific attention to seasonally flooded forests which harbor a less diverse but different tree flora, and similar carbon stocks as compared to terra firme forests.

目的森林样地是量化热带森林地上碳(AGC)储量和生物多样性的基准工具。然而,季节性淹水林或沙质土壤林等非典型土壤林类型在样地网络中广泛存在,但很少出现。这项研究从森林结构、树木多样性和组成方面评估了地理条件如何影响热带森林。地点:刚果民主共和国的洛米国家公园。方法在未充分研究的刚果盆地东南部设置89个0.25 ha的样地。地块分布在八种不同的洪水组合中(季节性洪水vs.陆地),土壤质地(粘土vs.沙子)和区域(北方vs.南方)。我们测试了洪水状况、土壤质地和区域对结构属性、树木多样性和树种组成的影响。我们还评估了结构属性、多样性指数和成分梯度之间的关系。结果共调查9156株,鉴定树种416种,其中豆科93种,占22.4%。陆地上的物种多样性远高于季节性洪泛森林。后者也显示出不同的物种组成,但具有相似的AGC(平均163 Mg C ha - 1)。区域对物种多样性和结构属性都有影响(多样性和AGC在北部最高),而土壤质地只对结构属性有影响(粘土的AGC最高)。最后,我们发现在不同尺度下,结构属性与多样性指数是独立的。本研究首次描述了刚果盆地东南部森林结构变异性高、树木生物多样性高、碳储量重要的特征。该地区值得进一步探索,特别要注意季节性泛滥的森林,这些森林拥有较少的多样性但不同的树木植物群,与陆地森林相比,碳储量相似。
{"title":"Tree Diversity and Carbon Stocks in Seasonally Flooded and Terra Firme Forests in the Inner Congo Basin","authors":"Modestine Kompanyi,&nbsp;Wannes Hubau,&nbsp;Jean-Remy Makana,&nbsp;John Hart,&nbsp;Terese Hart,&nbsp;Adeline Fayolle","doi":"10.1111/ddi.70118","DOIUrl":"https://doi.org/10.1111/ddi.70118","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Aim</h3>\u0000 \u0000 <p>Forest plots are a benchmark tool to quantify aboveground carbon (AGC) stocks and biodiversity in tropical forests. However, atypical edaphic forest types such as seasonally flooded forests or forests on sandy soil are scarce in the plot networks, despite their widespread occurrence. This study assessed how edaphic conditions shape tropical forests, in terms of forest structure, tree diversity and composition.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Location</h3>\u0000 \u0000 <p>Lomami National Park in the Democratic Republic of Congo.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>We installed 89 plots of 0.25 ha each in the understudied southeastern Congo basin. Plots are spread over eight different combinations of flooding regime (seasonally flooded vs. <i>terra firme</i>), soil texture (clay vs. sand) and region (north vs. south). We tested the influence of flooding regime, soil texture and region on structural attributes, tree diversity, and tree species composition. We also assessed relationships between structural attributes, diversity indices, and compositional gradients.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>We inventoried 9156 trees and identified a total of 416 tree species, with 93 species (22.4%) belonging to the Fabaceae family. Species diversity is much higher in <i>terra firme</i> than in seasonally flooded forests. The latter also shows a different species composition but holds similar AGC (163 Mg C ha<sup>−1</sup> on average). We also found that region influences both species diversity and structural attributes (diversity and AGC highest in the north), while soil texture only influences structural attributes (AGC highest on clay). Finally, we found that structural attributes are independent of diversity indices at different scales.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Main Conclusions</h3>\u0000 \u0000 <p>This study describes for the first time the forests in the southeastern Congo basin, which show a high degree of structural variability, high tree biodiversity and important carbon stocks. The region merits further exploration, with specific attention to seasonally flooded forests which harbor a less diverse but different tree flora, and similar carbon stocks as compared to <i>terra firme</i> forests.</p>\u0000 </section>\u0000 </div>","PeriodicalId":51018,"journal":{"name":"Diversity and Distributions","volume":"31 11","pages":""},"PeriodicalIF":4.2,"publicationDate":"2025-11-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/ddi.70118","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145521863","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Extreme Drought Restructures Floodplain Fish Assemblages Through Trait Convergence and Assembly Mechanism Shifts 极端干旱通过性状收敛和装配机制转移重组河漫滩鱼类组合
IF 4.2 2区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2025-11-06 DOI: 10.1111/ddi.70117
Yunzhe Huang, Huan Zhang, Min Guo, Zhe Li, Geng Huang, Li Wen, Yunliang Li, Yuyu Wang
<div> <section> <h3> Aim</h3> <p>Extreme droughts, intensified by climate change, threaten floodplain ecosystems. However, the mechanisms underlying biotic responses remain insufficiently understood. We assessed drought-induced changes in the taxonomic and functional structure of fish communities, identified key environmental and biotic drivers during the drought period, and evaluated post-drought community recovery trajectories.</p> </section> <section> <h3> Location</h3> <p>Poyang Lake, Yangtze River Basin, China.</p> </section> <section> <h3> Methods</h3> <p>Fish assemblages were surveyed across four floodplain lakes of Poyang Lake from 2022 to 2024 during the same seasonal window to isolate drought effects. Community composition and traits were analysed in multivariate trait space to assess changes in functional identity and the abundance of key species, and diversity indices at multiple scales were calculated. Key environmental drivers were identified using ordination and trait-environment association analyses.</p> </section> <section> <h3> Results</h3> <p>Extreme drought induced substantial shifts in fish community structure and functional composition, favouring small-bodied, benthopelagic omnivores and causing a 94% decline in the abundance of the apex predator <i>Culter alburnus</i>. Simultaneously, taxonomic and functional α-diversity declined significantly, while β-diversity increased, driven primarily by species turnover. The mechanisms underlying community assembly also shifted, with physicochemical factors predominant before the drought, but macrophyte growth form and macrobenthic biomass becoming the dominant drivers during drought conditions. Although hydrological connectivity was restored in 2024, community recovery remained incomplete, characterised by only partial functional trait rebound and persistent suppression of taxonomic richness, particularly among habitat specialists.</p> </section> <section> <h3> Main Conclusions</h3> <p>Extreme drought functioned as a basin-scale filter, selectively favouring fish assemblages with drought-tolerant trait combinations while leading to the decline or local extinction of intolerant taxa. The resulting habitat contraction and fragmentation reduced the local capacity to support biodiversity and promoted niche partitioning along gradients of habitat structure and food availability. Even after the restoration of hydrological connectivity, drought-induced habitat legacies and priority effects co
气候变化加剧的极端干旱威胁着洪泛平原的生态系统。然而,生物反应的机制仍然没有得到充分的了解。我们评估了干旱引起的鱼类群落分类和功能结构的变化,确定了干旱期间关键的环境和生物驱动因素,并评估了干旱后群落的恢复轨迹。地理位置:鄱阳湖,中国长江流域。方法对鄱阳湖4个漫滩湖泊于2022 - 2024年同一季节窗进行鱼类群落调查,以隔离干旱影响。在多元性状空间中分析群落组成和性状,评估功能同一性和关键物种丰度的变化,并计算多尺度多样性指数。利用协调分析和性状-环境关联分析确定了关键的环境驱动因素。结果极端干旱导致鱼类群落结构和功能组成发生重大变化,有利于小型底栖杂食性动物,导致顶端捕食者Culter alburnus丰度下降94%。分类和功能α-多样性显著下降,β-多样性增加,主要受物种更替的驱动。群落聚集的机制也发生了变化,干旱前以物理化学因子为主,干旱期间以大型植物生长形式和大型底栖生物生物量为主。尽管在2024年恢复了水文连通性,但群落恢复仍然不完整,其特征是功能性状的部分反弹和分类丰富度的持续抑制,特别是在栖息地专家中。结论极端干旱是一个流域尺度的过滤器,选择性地有利于具有耐旱性状组合的鱼类组合,而导致不耐旱分类群的减少或局部灭绝。由此导致的栖息地收缩和破碎化降低了当地支持生物多样性的能力,并促进了生态位沿栖息地结构和食物供应梯度的划分。即使在水文连通性恢复之后,干旱引起的栖息地遗产和优先效应也限制了专家的恢复,阻碍了干旱前群落组成的重建。
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引用次数: 0
Phylogeny and Climate Change–Driven Distribution Dynamics of Keteleeria 油杉系统发育与气候变化驱动的分布动态
IF 4.2 2区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2025-11-03 DOI: 10.1111/ddi.70116
Yanchao Yuan, Junhui Wang, Yufeng Guo, Zhiyong Wang, Shirong Liu, Zirui Jia
<div> <section> <h3> Aim</h3> <p><i>Keteleeria</i>, a relict genus of the Pinaceae family, flourished before the Quaternary ice age but has since experienced a significant decline, with many of its species now critically endangered and classified as key protected species. However, the phylogenetic relationships, taxonomic status, and biogeographic history of <i>Keteleeria</i> remain incompletely understood, posing significant challenges for its conservation and genetic improvement efforts. Here, we reconstruct the first molecular phylogeny of <i>Keteleeria</i>.</p> </section> <section> <h3> Location</h3> <p>China.</p> </section> <section> <h3> Methods</h3> <p>In this study, we applied genotyping-by-sequencing (GBS) technology to sequence 13 taxa of <i>Keteleeria</i>, with <i>Abies</i> and <i>Cedrus</i> as outgroups.</p> </section> <section> <h3> Results</h3> <p>A robust phylogenetic tree of <i>Keteleeria</i> was constructed, revealing six clades and resolving the evolutionary relationships of nearly all the taxa. Estimation of the divergence time and reconstruction of the ancestral area indicate that extant <i>Keteleeria</i> originated on the Yunnan–Kweichow Plateau during the Late Cretaceous and underwent multiple dispersal events throughout their evolutionary history. Predictive modelling of <i>Keteleeria</i> distribution dynamics revealed that its range during the Last Glacial Maximum (LGM) was broader than that during the Last Interglacial (LIG). Under future climate warming scenarios, its highly suitable habitat is projected to significantly decrease. In particular, under the RCP8.5 scenario, the area of highly suitable habitats will experience the most significant reduction. Temperature, rather than precipitation, was identified as the dominant factor shaping the patterns of <i>Keteleeria</i> distribution.</p> </section> <section> <h3> Main Conclusions</h3> <p>We constructed a robust phylogenetic tree, resolving the evolutionary relationships of nearly all the taxa. The results indicate that the evolutionary history of <i>Keteleeria</i> is complex; <i>Keteleeria</i> originated on the Yunnan–Kweichow Plateau during the Late Cretaceous and underwent multiple dispersal events. By predicting the dynamics of the <i>Keteleeria</i> distribution, we found that under future climate warming scenarios, its highly suitable habitat is projected to significantly decrease. This study provides important insights into the taxonomy of <i>Keteleeria</i>, establ
油杉属是松科的一个遗存属,在第四纪冰河时期之前繁盛,但此后经历了显著的衰退,其许多物种现在处于极度濒危状态,并被列为重点保护物种。然而,对油杉的系统发育关系、分类地位和生物地理历史的认识仍不完全清楚,这给其保护和遗传改良工作带来了重大挑战。在此,我们重建了油杉的第一个分子系统发育。位置 中国。方法以冷杉(Abies)和杉木(Cedrus)为外群,应用基因分型测序(GBS)技术对13个油杉分类群进行测序。结果构建了一个完整的油杉系统发育树,揭示了6个分支,揭示了几乎所有分类群的进化关系。分离时间的估算和祖先区域的重建表明,现存油杉起源于晚白垩世的云贵高原,在其进化史上经历了多次分散事件。预测模型表明,末次盛冰期(LGM)油杉的分布范围比末次间冰期(LIG)更宽。在未来气候变暖情景下,预计其高适宜生境将显著减少。特别是,在RCP8.5情景下,高度适宜生境的面积将经历最显著的减少。温度是影响江南油杉分布格局的主要因素,而不是降水。我们构建了一个健壮的系统发育树,解决了几乎所有分类群的进化关系。结果表明,油杉的进化历史是复杂的;油杉起源于晚白垩世的云贵高原,经历了多次扩散事件。通过对江南油杉分布动态的预测,发现在未来气候变暖情景下,江南油杉的高适宜生境将显著减少。本研究为进一步了解油杉的分类学提供了重要的理论依据,为深入了解其进化史奠定了理论基础,并为制定有效的保护策略以应对气候变化的影响提供了理论支持。
{"title":"Phylogeny and Climate Change–Driven Distribution Dynamics of Keteleeria","authors":"Yanchao Yuan,&nbsp;Junhui Wang,&nbsp;Yufeng Guo,&nbsp;Zhiyong Wang,&nbsp;Shirong Liu,&nbsp;Zirui Jia","doi":"10.1111/ddi.70116","DOIUrl":"https://doi.org/10.1111/ddi.70116","url":null,"abstract":"&lt;div&gt;\u0000 \u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Aim&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;&lt;i&gt;Keteleeria&lt;/i&gt;, a relict genus of the Pinaceae family, flourished before the Quaternary ice age but has since experienced a significant decline, with many of its species now critically endangered and classified as key protected species. However, the phylogenetic relationships, taxonomic status, and biogeographic history of &lt;i&gt;Keteleeria&lt;/i&gt; remain incompletely understood, posing significant challenges for its conservation and genetic improvement efforts. Here, we reconstruct the first molecular phylogeny of &lt;i&gt;Keteleeria&lt;/i&gt;.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Location&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;China.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Methods&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;In this study, we applied genotyping-by-sequencing (GBS) technology to sequence 13 taxa of &lt;i&gt;Keteleeria&lt;/i&gt;, with &lt;i&gt;Abies&lt;/i&gt; and &lt;i&gt;Cedrus&lt;/i&gt; as outgroups.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Results&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;A robust phylogenetic tree of &lt;i&gt;Keteleeria&lt;/i&gt; was constructed, revealing six clades and resolving the evolutionary relationships of nearly all the taxa. Estimation of the divergence time and reconstruction of the ancestral area indicate that extant &lt;i&gt;Keteleeria&lt;/i&gt; originated on the Yunnan–Kweichow Plateau during the Late Cretaceous and underwent multiple dispersal events throughout their evolutionary history. Predictive modelling of &lt;i&gt;Keteleeria&lt;/i&gt; distribution dynamics revealed that its range during the Last Glacial Maximum (LGM) was broader than that during the Last Interglacial (LIG). Under future climate warming scenarios, its highly suitable habitat is projected to significantly decrease. In particular, under the RCP8.5 scenario, the area of highly suitable habitats will experience the most significant reduction. Temperature, rather than precipitation, was identified as the dominant factor shaping the patterns of &lt;i&gt;Keteleeria&lt;/i&gt; distribution.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Main Conclusions&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;We constructed a robust phylogenetic tree, resolving the evolutionary relationships of nearly all the taxa. The results indicate that the evolutionary history of &lt;i&gt;Keteleeria&lt;/i&gt; is complex; &lt;i&gt;Keteleeria&lt;/i&gt; originated on the Yunnan–Kweichow Plateau during the Late Cretaceous and underwent multiple dispersal events. By predicting the dynamics of the &lt;i&gt;Keteleeria&lt;/i&gt; distribution, we found that under future climate warming scenarios, its highly suitable habitat is projected to significantly decrease. This study provides important insights into the taxonomy of &lt;i&gt;Keteleeria&lt;/i&gt;, establ","PeriodicalId":51018,"journal":{"name":"Diversity and Distributions","volume":"31 11","pages":""},"PeriodicalIF":4.2,"publicationDate":"2025-11-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/ddi.70116","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145469487","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Integrating Environmental DNA Metabarcoding and Remote Sensing Reveals Known and Novel Fish Diversity Hotspots in a World Heritage Area 结合环境DNA元条形码和遥感揭示世界遗产区已知和新的鱼类多样性热点
IF 4.2 2区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2025-10-30 DOI: 10.1111/ddi.70074
Manuela R. Bizzozzero, Svenja M. Marfurt, Florian Altermatt, Erik P. Willems, Alexander Damm-Reiser, Simon J. Allen, Jean-Claude Walser, Michael Krützen

Aim

Shark Bay, a UNESCO World Heritage site in Western Australia, is highly vulnerable to climate change, yet its fish biodiversity remains poorly understood at fine spatial scales. We integrated environmental DNA (eDNA) metabarcoding with high-resolution remote sensing to assess and extrapolate fish diversity patterns, providing a scalable framework for biodiversity monitoring in dynamic coastal ecosystems.

Location

Shark Bay, Western Australia.

Methods

We analysed 270 water samples across 560 km2 using fish-specific 16S and 12S rRNA metabarcoding, comparing our results to earlier studies using conventional methods including seining, trawling, fisheries reports, and fish traps. We linked biodiversity patterns to key environmental variables, including depth, salinity, sea surface temperature, and habitat characteristics derived from high-resolution satellite imagery. To predict fish biodiversity across unsampled areas, we employed machine-learning models, enabling spatial extrapolation of eDNA data across the seascape.

Results

eDNA metabarcoding identified 106 fish species across 132 genera and 71 families, with substantial overlap with conventional monitoring but broader coverage at higher taxonomic levels. Fish richness increased with decreasing salinity, high channel habitat coverage, and moderate depths with high seagrass coverage. We delineated five distinct fish communities (A–E): two shallow seagrass communities—one in sparse seagrass (A) and another in dense seagrass (B), one in channel habitats (C) with the greatest fish diversity; one in deep sandy waters (D) and one in medium-depth, seagrass-free areas (E). Additionally, we detected several tropical species, suggesting poleward shifts due to rising water temperatures.

Main Conclusions

This study highlights the utility of combining marine eDNA metabarcoding with remote sensing to detect fine-scale biodiversity. The integration of machine learning enables spatial upscaling and timely responses to habitat changes, enhancing marine conservation and management. By identifying key environmental drivers of fish diversity, this approach supports proactive conservation strategies, providing a scalable model for biodiversity monitoring under climate change.

鲨鱼湾是位于西澳大利亚的联合国教科文组织世界遗产,极易受到气候变化的影响,但其鱼类生物多样性在精细的空间尺度上仍然知之甚少。我们将环境DNA (eDNA)元条形码与高分辨率遥感相结合,评估和推断鱼类多样性模式,为动态沿海生态系统的生物多样性监测提供了可扩展的框架。地点:西澳大利亚鲨鱼湾。方法利用鱼类特异性16S和12S rRNA元条形码技术对560平方公里范围内的270个水样进行了分析,并将结果与早期采用围网、拖网捕捞、渔业报告和渔网等传统方法的研究结果进行了比较。我们将生物多样性模式与关键的环境变量联系起来,包括深度、盐度、海面温度和高分辨率卫星图像得出的栖息地特征。为了预测未采样地区的鱼类生物多样性,我们采用了机器学习模型,实现了整个海景中eDNA数据的空间外推。结果eDNA元条形码鉴定出71科132属106种鱼类,与常规监测结果有较大重叠,但在较高的分类水平上覆盖范围更广。鱼类丰富度随盐度降低、河道生境覆盖度高、中等深度海草覆盖度高而增加。我们描绘了五个不同的鱼类群落(A - e):两个浅水海草群落-一个在稀疏海草(A)中,另一个在密集海草(B)中,一个在通道生境(C)中,鱼类多样性最大;一个在深沙质水域(D),一个在中等深度,无海草的地区(E)。此外,我们还发现了几种热带物种,表明由于水温上升而向极地移动。本研究强调了海洋eDNA元条形码与遥感相结合在精细尺度生物多样性检测中的应用。机器学习的整合使空间升级和及时响应栖息地变化,加强海洋保护和管理。通过确定鱼类多样性的关键环境驱动因素,该方法支持积极的保护策略,为气候变化下的生物多样性监测提供了可扩展的模型。
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引用次数: 0
Genetic Differentiation in a Wide-Ranging Tropical Seabird in the Indian Ocean Is Linked With Oceanographic Factors 印度洋一种广泛分布的热带海鸟的遗传分化与海洋学因素有关
IF 4.2 2区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2025-10-30 DOI: 10.1111/ddi.70078
Helena Teixeira, Malcolm A. C. Nicoll, Audrey Jaeger, Nancy Bunbury, Arthur Choeur, Luke A'Bear, Camille Lebarbenchon, Maria Bielsa, Ruth Dunn, Robin Freeman, Nirmal Jivan Shah, Gerard Rocamora, Licia Calabrese, Alice M. Trevail, Julie Tourmetz, Stephen Votier, Matthieu Le Corre, Laurence Humeau

Aim

Knowledge of the main drivers of population differentiation is crucial for understanding evolutionary processes and preserving biodiversity. While primarily studied in terrestrial habitats, the mechanisms operating in the marine realm are less well understood. This study reconstructed the phylogeographic history of a tropical seabird to identify relevant marine barriers promoting intraspecific diversity in the Western Indian Ocean.

Location

Western Indian Ocean.

Taxon

Three subspecies of tropical shearwater: Puffinus bailloni bailloni , P. b. nicolae, P. b. colstoni.

Methods

We used restriction site-associated DNA sequencing and applied population genomics to birds from six breeding colonies to assess intraspecific diversity, population genetic structure and connectivity in the tropical shearwater. Results were complemented with data from six oceanographic variables and effective migration surfaces to evaluate the role of oceanographic factors in driving population differentiation.

Results

All analyses consistently separated the birds from the northern colonies (subsp. nicolae and colstoni) from those of the southern islands (subsp. bailloni), but failed to assign the colstoni birds as a different taxon. Results revealed remarkable levels of genetic differentiation within an ocean basin in a highly vagile species and suggested higher levels of gene flow at the northern limit of the species' distribution compared to the southern range.

Main Conclusions

Our study suggests that ocean surfaces and sea surface temperature may constitute an important barrier to gene flow for the tropical shearwater and potentially other marine species in the region. This study does not support the colstoni form as a different subspecies, highlighting the need for further taxonomic reassessment. Ultimately, the results allowed us to identify Europa and Aldabra as the most threatened management units and propose conservation strategies directly applicable to these most at-risk colonies.

目的了解种群分化的主要驱动因素对理解进化过程和保护生物多样性至关重要。虽然主要是在陆地栖息地进行研究,但在海洋领域的运作机制却不太清楚。本研究重建了一种热带海鸟的系统地理历史,以确定促进西印度洋种内多样性的相关海洋屏障。位置:西印度洋。分类群热带海鸥的三个亚种:海鹦,p.b. nicolae, p.b. colstoni方法利用限制性内切位点相关DNA测序和种群基因组学方法,对热带海鸥的种内多样性、种群遗传结构和连通性进行分析。利用6个海洋变量和有效迁移面数据对结果进行了补充,以评估海洋因素在种群分化中的作用。结果所有分析结果一致地将该鸟与北部种群(亚群)分离开来。Nicolae和colstoni)来自南部岛屿(亚纲;Bailloni),但未能将colstoni鸟类划分为不同的分类单元。结果显示,在一个海洋盆地内,一个高度流动的物种具有显著的遗传分化水平,表明该物种分布的北部界限比南部范围具有更高的基因流动水平。本研究表明,海洋表面和海温可能是该地区热带海鸥和其他海洋物种基因流动的重要屏障。这项研究不支持colstoni形式作为一个不同的亚种,强调需要进一步的分类重新评估。最终,结果使我们能够将欧罗巴和阿尔达布拉确定为最受威胁的管理单位,并提出直接适用于这些最危险殖民地的保护策略。
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引用次数: 0
Widespread Decline of Ground Beetles in Germany 德国大地甲虫的普遍减少
IF 4.2 2区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2025-10-30 DOI: 10.1111/ddi.70112
Shawan Chowdhury, Diana E. Bowler, Estève Boutaud, Ortwin Bleich, Helge Bruelheide, Jörn Buse, Thore Engel, Jörg Gebert, Volker Grescho, Stephan Gürlich, Ingmar Harry, Florian Jansen, Reinhard A. Klenke, Roel van Klink, Marten Winter, Aletta Bonn

Aim

Many insect species are facing existential crises, primarily due to diverse human activities. Most insect assessments, however, are based on relatively short time series or some iconic species. Here, we assess how the occupancy of ground beetles has changed in Germany over the last 36 years.

Location

Germany.

Methods

In close collaboration with taxonomic experts from natural history societies, we compiled the best available occurrence data for ground beetles in Germany, estimated the changes in species occupancy over time, and related these changes to species traits and characteristics.

Results

We obtained trends for 383 species and found that 52% of species significantly declined, and 22% significantly increased in site occupancy over the last 36 years. The remainder of the species (26%) all showed a mean negative trend, albeit nonsignificant. Species classified as non-threatened in the German red list declined at a similar rate as threatened species, with 64% of the Near Threatened species experiencing significant declines (highest among all red list categories). Across all traits, we found that large (compared to medium-sized) and omnivore (compared to predator) species declined less.

Conclusions

Since ground beetles are key predators in many natural and agricultural ecosystems that play an important role in pest control and the food chain, their decline should raise concerns. Thus, we urgently plead for more harmonised and systematic monitoring of this insect group.

目的许多昆虫物种正面临着生存危机,这主要是由于人类活动的多样性。然而,大多数昆虫评估都是基于相对较短的时间序列或一些标志性物种。在这里,我们评估了过去36年来德国地面甲虫的占有情况是如何变化的。位置 德国。方法通过与自然学会分类学专家的密切合作,收集了德国地甲虫的最佳发生数据,估算了物种占用率随时间的变化,并将这些变化与物种特征和特征联系起来。结果分析了383种植物的变化趋势,其中52%的植物的立地占用率显著下降,22%的植物的立地占用率显著增加。其余物种(26%)均表现出平均负趋势,尽管不显著。在德国红色名录中被列为非濒危物种的物种数量下降的速度与受威胁物种相似,64%的近濒危物种数量显著下降(在所有红色名录类别中最高)。在所有特征中,我们发现大型(与中型相比)和杂食(与捕食者相比)物种的下降幅度较小。由于地面甲虫是许多自然和农业生态系统中的主要捕食者,在害虫控制和食物链中起着重要作用,因此它们的减少应该引起关注。因此,我们迫切要求对这一昆虫群体进行更加协调和系统的监测。
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引用次数: 0
Historical Impacts of Invasive Species May Not Always Be What They Seem: A Genetic Perspective From an Endangered Native Species 入侵物种的历史影响可能并不总是他们看起来的那样:来自濒危本土物种的遗传观点
IF 4.2 2区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2025-10-30 DOI: 10.1111/ddi.70072
Charlotte Jense, Bruce E. Deagle, Rob Freeman, Christopher P. Burridge

Aim

Invasive species can affect native species detrimentally, causing localised population declines, range contractions and extinctions. Given the costs and difficulties of controlling invasive species, sound knowledge of the potential benefits to native species is essential. However, sometimes the impacts of invasive species have been inferred by proxy, based on allopatric distribution with native species. Galaxias johnstoni, an endemic freshwater fish in Tasmania, is one such species. It has a restricted range and is believed to have experienced fragmentation and decline due to the introduction of brown trout, Salmo trutta, in 1864. This study examines patterns of genetic diversity in contemporary G. johnstoni populations and tests for genetic signatures of impact by introduced brown trout.

Location

Central highlands Tasmania.

Methods

Nuclear Single Nucleotide Polymorphisms and mitochondrial DNA sequences were used to assess genetic isolation of populations. Approximate Bayesian Computation was employed to test alternative historical demographic scenarios for the observed patterns of genetic variation.

Results

Genetic isolation of the sampled populations was confirmed. However, brown trout do not appear to have caused genetic isolation of contemporary G. johnstoni populations and received equivocal support for reductions in population size. Instead, habitat preferences and post-glacial recolonisation from local refugia appear more likely to explain the contemporary patterns of G. johnstoni genetic variation.

Main Conclusions

Our study highlights how genetic approaches can evaluate historical impacts of invasive species, especially where native and invasive species are presently allopatric. We also illustrate potential limitations of this approach: (1) the possibility that other processes have influenced native species coincident with the arrival of invasive pests, (2) the overshadowing of invasive species impacts by signatures from earlier demographic events and (3) the inability to recover signatures from genetically isolated populations that do not survive to the present. Multiple lines of evidence are critical to inform appropriate conservation actions.

目的入侵物种会对本地物种造成不利影响,导致局部种群数量下降、范围缩小和灭绝。考虑到控制入侵物种的成本和困难,对本地物种潜在利益的充分了解是必不可少的。然而,有时入侵物种的影响是通过代理来推断的,基于与本地物种的异域分布。塔斯马尼亚岛的一种地方性淡水鱼——johnstoni就是这样一个物种。它的范围有限,据信由于1864年引入褐鳟鱼Salmo trutta而经历了分裂和衰退。本研究考察了当代约翰斯顿鳟鱼种群的遗传多样性模式,并测试了引入褐鳟影响的遗传特征。地理位置:塔斯马尼亚中部高地。方法采用核单核苷酸多态性和线粒体DNA序列进行遗传分离鉴定。采用近似贝叶斯计算来检验观察到的遗传变异模式的其他历史人口统计学情景。结果证实了样本群体的遗传分离。然而,褐鳟似乎并没有造成当代约翰斯顿褐鳟种群的遗传隔离,因此对种群规模减少的支持也模棱两可。相反,栖息地偏好和当地难民的冰川后再定居似乎更有可能解释约翰斯通氏蝽的当代遗传变异模式。我们的研究强调了遗传方法如何评估入侵物种的历史影响,特别是在本地和入侵物种目前是异域的地方。我们还说明了这种方法的潜在局限性:(1)与入侵害虫的到来同时影响本地物种的其他过程的可能性;(2)入侵物种的影响被早期人口统计事件的特征所掩盖;(3)无法从遗传隔离的种群中恢复特征,这些种群无法存活到现在。多种证据对于采取适当的保护行动至关重要。
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Diversity and Distributions
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